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Properties
Property Name | Value |
TranscriptId | 634240 |
Track | FilteredModels2 |
ProteinId | 634154 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_58 | supercontig | scaffold_58:84560..87679 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10719 ID=mRNA_10719|Name=jgi.p|Nanoce1779_2|634154|organism=Nannochloropsis oceanica|type=mRNA|length=2817bp AGCCGCTTCCACACCTTTACACCACACACCGATAGAACACAATAGCAATT GTATTTGCCCTCTTTGTCTGGTGTAAGGTCAATCATGGCAACGGAGGTCT CCTTCCTCCTGACTGTCATCGCCCTGCTACCCAGGGTCCTCGCCACCAGC GCCGTCACTTTCCTGTGCCTGTGGGTGGGCAAGCACTGCTTTATCTTCCT CCAGGGCTTCTACATGGTCAGTAAAAGGCATATCCTACTCATGGAAAGAG GAGGGAAATGGCTGGGAGGGAATGTGTTCGGAAACCGCGGGCTGGCTCTA TAATGTGATGCTTCAAGGTTGACTTCCTTCTCACACACATATGGCTATCC TTTGCACAGCGCTCCCATCAAGGATGCTGACTACAGAGTCTATGTCCTTA CCCATCTACACTAGTAATCTATTAAATTGATAACATTCCCTCTCCTCTCC CCTCTATCGCCTTCCTTTTCTCCACTCCGTCCCCTTCCACCACAAGGTCC GCCACCTTCCCCACATCTACCAGTACTGCGACATCTTTTCCAGCGTGGGC TTACTATTCCCCTTCTTGCTCAAGTACAGGTCCAACTTCTACGAAATCGC CCCCGAGCTATTTGAATCGCTACAGACCCCCTTGTTTGCTTTCATCTCTT CCAAAAACGTTACTATCCACATCAACGATGCGCATCTAATCCGGGAAGTC TGCATTGGCAAGCGGAGGAGCTTTCCCAAGGCCGTTCACATGTATGACAC AGTCAGGGTGTTCGGGGAGAACATCGTGACGACAGAGGGAGAGGTCTGGA GGCGGCACAGGTTTGTGGCGCGCGCGGCCTTCAGCGAGGCTAACAACCGG TTGGTGTTTGAGACGGTCCAGGCGTGTGCGGGAGAGATGATGGACGCCTG GGAGAGGCAGAGGGAGGGAGGGAAAGAGAAAGGGCAGAACGAGGGAGGGA ATAATGAAGGCTTTCGGGTGACATTGATGGAGGATATGACGCAACTGACC TTGGCCGTCATTAGCCAGGCCAGCTTTGGGCTTCAGCTGGAGGCCGCCTA TGGGAAGGAGAGGGAGGAGAAGGAGAAGGCAGAGAATGAGGAGGGGAGGG GCGTGAAGGGGGGAAAGGATGGGCGGTACACCATGTCGTTTACCAAGTGC ATGCAAATGGAGATCGCCCGCGCCTACCGAGAATTCGATTGCCACTTGCT AGACAGCATCGATCGGGAACGGAGCAGACAGGCAGGGATGGAGGGAGGGA CATTGATGAAGGAGGAAGGCGACGGGGAAGTGGCGCTAGACGGGTGCCGC AGACGATGGGGGGGCTTGAGCCGGATGCAGTCCTTTCGGAGGAGGAAGGA CGCGGGAGGGAGGAAGGGAGGGCCAATGAAGAAGGAGGACCACATGGCCT GTGTCCGCTCTCCGGAGCAGAAGGAGCAGGAGCGGCAGCACACCCAGCGT CGGCAGCAGAATCTCTTCTCGCTTCTCGTCCAAGCCAACGACAAGGCCGA CGACACCGCGGGCTCGGGGGAGGTCGAGGAGGAGGGCGAGGGGAAGAAAA AGCGGGGGACGGTCGACCGACTTAAACTGCAGGAGTTGCTGGGTAATGCC TTCATCTTCCTTCTGGCGGGCCACGAGACGTCGGCGCACACGCTGATTTG GGCCCTCCTCCTCCTCGCCCTCCACCCCGACGAACAAGCAGTCGCCCACG AGGAGGTCATCCGGGTACTCGGCTCGCCCGCCCTCCCTTCCGACTCCTCC GACCCTTCTTCCTCCCCCCTTCCCTCAATGACGTACGACCAGCTCTCCCT CCTCCCCTACTGCCAAGGCGTCATGAACGAAGCCCTCCGCCTCTTTCCCC CGGTCACCATGATCCCCAAGGTCTGTTCCGCCGACACCACCCTCACCCTC CCTCCCTCCTCCTCCTCTCCCTCCTCCTCTTCTTCTTCGTTCCGAATTCC CAAGGGGGTCAATGTTTTTCTGAATCTCTATGCTCTGCACCGCAATCCGA AGCACTACGCCGAGCCCAACGCTTTCAAGCCGCGCCGGTGGGTGAAGCCG GAGGGGAAGGCGGAAGGGGAGGCGAAGGGGAAGGCGGAGGGGAAGGAAGG GGGAGAAGAGGAGCAGTTCGTGGGCATTGACTACTTTGCATTCGCGCCCT TTAGCCTGGGCGAGAGGAGCTGCTTGGGGAGGAAGTTCGGACAGATCACC GTCATGGCCTCCTTAGCTCTGCTGTTGCAGCGGTACGAGGTAGGGGTGGG GGGGGGGAGGGAGGGAGGAAAGGAGGGGGAGAGGTGGGAGGAGCGGAAGG CCCGGATGTTAAAGACGAAAAATATGCTGACGCTATGCCCGAAGGACATG GGGGTGCAGCTGGTGTTTACCAGAAGATAGAGGGAGGGAGGGGGAGAGGG AGAGCCGATCAATGGAAAAGCGATGGTCAATGAGAGGGAGAGGTAGCTGG GAGAAAAAGGAGGGAGGAGAGGAATGACGAAGGTCGAGTGCCATTAAAAT GGAACAGTCCATCGCAGAGGCCGGTTCTTGATTGATGCAACTACAATAAC AAGACGACTTTCTTTCTCAAAACGAGGGCTTTGAGAATGGAGACGCCATC GACTGGGGGGTGCTAGTAGCTAGTCGGAAAGCAGGCGAATGGAGAGATAG AGACTGAGAGGCAGAAGGGCAGAAAGACGCAGAGACATAAGGCGAGAGAG ACATAGAAGCAGACAGAAAGAAAGTAGACAGAGACAGAGAAAATAGGTGT GTACAAGAGAAATCAGAAAAGAAATTTGATGTGACAAAACGCGATGAGGA GAGTGCGTTTCGTTCTC back to topprotein sequence of jgi.p|Nanoce1779_2|634154 >mRNA_10719-protein ID=mRNA_10719-protein|Name=jgi.p|Nanoce1779_2|634154|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp MYDTVRVFGENIVTTEGEVWRRHRFVARAAFSEANNRLVFETVQACAGEM MDAWERQREGGKEKGQNEGGNNEGFRVTLMEDMTQLTLAVISQASFGLQL EAAYGKEREEKEKAENEEGRGVKGGKDGRYTMSFTKCMQMEIARAYREFD CHLLDSIDRERSRQAGMEGGTLMKEEGDGEVALDGCRRRWGGLSRMQSFR RRKDAGGRKGGPMKKEDHMACVRSPEQKEQERQHTQRRQQNLFSLLVQAN DKADDTAGSGEVEEEGEGKKKRGTVDRLKLQELLGNAFIFLLAGHETSAH TLIWALLLLALHPDEQAVAHEEVIRVLGSPALPSDSSDPSSSPLPSMTYD QLSLLPYCQGVMNEALRLFPPVTMIPKVCSADTTLTLPPSSSSPSSSSSS FRIPKGVNVFLNLYALHRNPKHYAEPNAFKPRRWVKPEGKAEGEAKGKAE GKEGGEEEQFVGIDYFAFAPFSLGERSCLGRKFGQITVMASLALLLQRYE VGVGGGREGGKEGERWEERKARMLKTKNMLTLCPKDMGVQLVFTRR* back to topmRNA from alignment at scaffold_58:84560..87679+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10719 ID=mRNA_10719|Name=jgi.p|Nanoce1779_2|634154|organism=Nannochloropsis oceanica|type=mRNA|length=3120bp|location=Sequence derived from alignment at scaffold_58:84560..87679+ (Nannochloropsis oceanica) AGCCGCTTCCACACCTTTACACCACACACCGATAGAACACAATAGCAATT
GTATTTGCCCTCTTTGTCTGGTGTAAGGTCAATCATGGCAACGGAGGTCT
CCTTCCTCCTGACTGTCATCGCCCTGCTACCCAGGGTCCTCGCCACCAGC
GCCGTCACTTTCCTGTGCCTGTGGGTGGGCAAGCACTGCTTTATCTTCCT
CCAGGGCTTCTACATGGTCAGTAAAAGGCATATCCTACTCATGGAAAGAG
GAGGGAAATGGCTGGGAGGGAATGTGTTCGGAAACCGCGGGCTGGCTCTA
TAATGTGATGCTTCAAGGTTGACTTCCTTCTCACACACATATGGCTATCC
TTTGCACAGCGCTCCCATCAAGGATGCTGACTACAGAGTCTATGTCCTTA
CCCATCTACACTAGTAATCTATTAAATTGATAACATTCCCTCTCCTCTCC
CCTCTATCGCCTTCCTTTTCTCCACTCCGTCCCCTTCCACCACAAGGTCC
GCCACCTTCCCCACATCTACCAGTACTGCGACATCTTTTCCAGCGTGGGC
TTACTATTCCCCTTCTTGCTCAAGTACAGGTCCAACTTCTACGAAATCGC
CCCCGAGCTATTTGAATCGCTACAGACCCCCTTGTTTGCTTTCATCTCTT
CCAAAAACGTTACTATCCACATCAACGATGCGCATCTAATCCGGGAAGTC
TGCATTGGCAAGCGGAGGAGCTTTCCCAAGGCCGTTCACATGTATGACAC
AGTCAGGGTGTTCGGGGAGAACATCGTGACGACAGAGGGAGAGGTCTGGA
GGCGGCACAGGTTTGTGGCGCGCGCGGCCTTCAGCGAGGCTAACAACCGG
TTGGTGTTTGAGACGGTCCAGGCGTGTGCGGGAGAGATGATGGACGCCTG
GGAGAGGCAGAGGGAGGGAGGGAAAGAGAAAGGGCAGAACGAGGGAGGGA
ATAATGAAGGCTTTCGGGTGACATTGATGGAGGATATGACGCAACTGACC
TTGGCCGTCATTAGCCAGGCCAGCTTTGGGCTTCAGCTGGAGGCCGCCTA
TGGGAAGGAGAGGGAGGAGAAGGAGAAGGCAGAGAATGAGGAGGGGAGGG
GCGTGAAGGGGGGAAAGGATGGGCGGTACACCATGTCGTTTACCAAGTGC
ATGCAAATGGTCTCCCATCACACGTTGGCTAAGGTAGGTAGATGGGTGGG
GAGGGAGGGAGGGAGAGAGGGAGGGGAGGGGCCTCGGCGGACTCAACTTT
TGCTTCTCATACCTTGCTTTCAACTCGATTCCTCCCTCCTTTTCTCTGCC
TTTTAGTCTATTATATTTTCTCTCATGTCCGCTTTCTTTTCAATAGATTC
AGACGTACCACCACTCATCCTTCCCCCTTTTCCTCCCTCTCTCCCCCCTT
TTCTTCTCCAGGTCCTAGTCCCCAGATTGCTCTTCTCCATGCCCTTCCTC
CCCCGCCTACAGGAGATCGCCCGCGCCTACCGAGAATTCGATTGCCACTT
GCTAGACAGCATCGATCGGGAACGGAGCAGACAGGCAGGGATGGAGGGAG
GGACATTGATGAAGGAGGAAGGCGACGGGGAAGTGGCGCTAGACGGGTGC
CGCAGACGATGGGGGGGCTTGAGCCGGATGCAGTCCTTTCGGAGGAGGAA
GGACGCGGGAGGGAGGAAGGGAGGGCCAATGAAGAAGGAGGACCACATGG
CCTGTGTCCGCTCTCCGGAGCAGAAGGAGCAGGAGCGGCAGCACACCCAG
CGTCGGCAGCAGAATCTCTTCTCGCTTCTCGTCCAAGCCAACGACAAGGC
CGACGACACCGCGGGCTCGGGGGAGGTCGAGGAGGAGGGCGAGGGGAAGA
AAAAGCGGGGGACGGTCGACCGACTTAAACTGCAGGAGTTGCTGGGTAAT
GCCTTCATCTTCCTTCTGGCGGGCCACGAGACGTCGGCGCACACGCTGAT
TTGGGCCCTCCTCCTCCTCGCCCTCCACCCCGACGAACAAGCAGTCGCCC
ACGAGGAGGTCATCCGGGTACTCGGCTCGCCCGCCCTCCCTTCCGACTCC
TCCGACCCTTCTTCCTCCCCCCTTCCCTCAATGACGTACGACCAGCTCTC
CCTCCTCCCCTACTGCCAAGGCGTCATGAACGAAGCCCTCCGCCTCTTTC
CCCCGGTCACCATGATCCCCAAGGTCTGTTCCGCCGACACCACCCTCACC
CTCCCTCCCTCCTCCTCCTCTCCCTCCTCCTCTTCTTCTTCGTTCCGAAT
TCCCAAGGGGGTCAATGTTTTTCTGAATCTCTATGCTCTGCACCGCAATC
CGAAGCACTACGCCGAGCCCAACGCTTTCAAGCCGCGCCGGTGGGTGAAG
CCGGAGGGGAAGGCGGAAGGGGAGGCGAAGGGGAAGGCGGAGGGGAAGGA
AGGGGGAGAAGAGGAGCAGTTCGTGGGCATTGACTACTTTGCATTCGCGC
CCTTTAGCCTGGGCGAGAGGAGCTGCTTGGGGAGGAAGTTCGGACAGATC
ACCGTCATGGCCTCCTTAGCTCTGCTGTTGCAGCGGTACGAGGTAGGGGT
GGGGGGGGGGAGGGAGGGAGGAAAGGAGGGGGAGAGGTGGGAGGAGCGGA
AGGCCCGGATGTTAAAGACGAAAAATATGCTGACGCTATGCCCGAAGGAC
ATGGGGGTGCAGCTGGTGTTTACCAGAAGATAGAGGGAGGGAGGGGGAGA
GGGAGAGCCGATCAATGGAAAAGCGATGGTCAATGAGAGGGAGAGGTAGC
TGGGAGAAAAAGGAGGGAGGAGAGGAATGACGAAGGTCGAGTGCCATTAA
AATGGAACAGTCCATCGCAGAGGCCGGTTCTTGATTGATGCAACTACAAT
AACAAGACGACTTTCTTTCTCAAAACGAGGGCTTTGAGAATGGAGACGCC
ATCGACTGGGGGGTGCTAGTAGCTAGTCGGAAAGCAGGCGAATGGAGAGA
TAGAGACTGAGAGGCAGAAGGGCAGAAAGACGCAGAGACATAAGGCGAGA
GAGACATAGAAGCAGACAGAAAGAAAGTAGACAGAGACAGAGAAAATAGG
TGTGTACAAGAGAAATCAGAAAAGAAATTTGATGTGACAAAACGCGATGA
GGAGAGTGCGTTTCGTTCTC back to topCoding sequence (CDS) from alignment at scaffold_58:84560..87679+ >mRNA_10719 ID=mRNA_10719|Name=jgi.p|Nanoce1779_2|634154|organism=Nannochloropsis oceanica|type=CDS|length=3282bp|location=Sequence derived from alignment at scaffold_58:84560..87679+ (Nannochloropsis oceanica) ATGTATGACACAGTCAGGGTGTTCGGGGAGAACATCGTGACGACAGAGGG AGAGGTCTGGAGGCGGCACAGGTTTGTGGCGCGCGCGGCCTTCAGCGAGG CTAACAACCGGTTGGTGTTTGAGACGGTCCAGGCGTGTGCGGGAGAGATG ATGGACGCCTGGGAGAGGCAGAGGGAGGGAGGGAAAGAGAAAGGGCAGAA CGAGGGAGGGAATAATGAAGGCTTTCGGGTGACATTGATGGAGGATATGA CGCAACTGACCTTGGCCGTCATTAGCCAGGCCAGCTTTGGGCTTCAGCTG GAGGCCGCCTATGGGAAGGAGAGGGAGGAGAAGGAGAAGGCAGAGAATGA GGAGGGGAGGGGCGTGAAGGGGGGAAAGGATGGGCGGTACACCATGTCGT TTACCAAGTGCATGCAAATGGAGATCGCCCGCGCCTACCGAGAATTCGAT TGCCACTTGCTAGACAGCATCGATCGGGAACGGAGCAGACAGGCAGGGAT GGAGGGAGGGACATTGATGAAGGAGGAAGGCGACGGGGAAGTGGCGCTAG ACGGGTGCCGCAGACGATGGGGGGGCTTGAGCCGGATGCAGTCCTTTCGG AGGAGGAAGGACGCGGGAGGGAGGAAGGGAGGGCCAATGAAGAAGGAGGA CCACATGGCCTGTGTCCGCTCTCCGGAGCAGAAGGAGCAGGAGCGGCAGC ACACCCAGCGTCGGCAGCAGAATCTCTTCTCGCTTCTCGTCCAAGCCAAC GACAAGGCCGACGACACCGCGGGCTCGGGGGAGGTCGAGGAGGAGGGCGA GGGGAAGAAAAAGCGGGGGACGGTCGACCGACTTAAACTGCAGGAGTTGC TGGGTAATGCCTTCATCTTCCTTCTGGCGGGCCACGAGACGTCGGCGCAC ACGCTGATTTGGGCCCTCCTCCTCCTCGCCCTCCACCCCGACGAACAAGC AGTCGCCCACGAGGAGGTCATCCGGGTACTCGGCTCGCCCGCCCTCCCTT CCGACTCCTCCGACCCTTCTTCCTCCCCCCTTCCCTCAATGACGTACGAC CAGCTCTCCCTCCTCCCCTACTGCCAAGGCGTCATGAACGAAGCCCTCCG CCTCTTTCCCCCGGTCACCATGATCCCCAAGGTCTGTTCCGCCGACACCA CCCTCACCCTCCCTCCCTCCTCCTCCTCTCCCTCCTCCTCTTCTTCTTCG TTCCGAATTCCCAAGGGGGTCAATGTTTTTCTGAATCTCTATGCTCTGCA CCGCAATCCGAAGCACTACGCCGAGCCCAACGCTTTCAAGCCGCGCCGGT GGGTGAAGCCGGAGGGGAAGGCGGAAGGGGAGGCGAAGGGGAAGGCGGAG GGGAAGGAAGGGGGAGAAGAGGAGCAGTTCGTGGGCATTGACTACTTTGC ATTCGCGCCCTTTAGCCTGGGCGAGAGGAGCTGCTTGGGGAGGAAGTTCG GACAGATCACCGTCATGGCCTCCTTAGCTCTGCTGTTGCAGCGGTACGAG GTAGGGGTGGGGGGGGGGAGGGAGGGAGGAAAGGAGGGGGAGAGGTGGGA GGAGCGGAAGGCCCGGATGTTAAAGACGAAAAATATGCTGACGCTATGCC CGAAGGACATGGGGGTGCAGCTGGTGTTTACCAGAAGATAGATGTATGAC ACAGTCAGGGTGTTCGGGGAGAACATCGTGACGACAGAGGGAGAGGTCTG GAGGCGGCACAGGTTTGTGGCGCGCGCGGCCTTCAGCGAGGCTAACAACC GGTTGGTGTTTGAGACGGTCCAGGCGTGTGCGGGAGAGATGATGGACGCC TGGGAGAGGCAGAGGGAGGGAGGGAAAGAGAAAGGGCAGAACGAGGGAGG GAATAATGAAGGCTTTCGGGTGACATTGATGGAGGATATGACGCAACTGA CCTTGGCCGTCATTAGCCAGGCCAGCTTTGGGCTTCAGCTGGAGGCCGCC TATGGGAAGGAGAGGGAGGAGAAGGAGAAGGCAGAGAATGAGGAGGGGAG GGGCGTGAAGGGGGGAAAGGATGGGCGGTACACCATGTCGTTTACCAAGT GCATGCAAATGGAGATCGCCCGCGCCTACCGAGAATTCGATTGCCACTTG CTAGACAGCATCGATCGGGAACGGAGCAGACAGGCAGGGATGGAGGGAGG GACATTGATGAAGGAGGAAGGCGACGGGGAAGTGGCGCTAGACGGGTGCC GCAGACGATGGGGGGGCTTGAGCCGGATGCAGTCCTTTCGGAGGAGGAAG GACGCGGGAGGGAGGAAGGGAGGGCCAATGAAGAAGGAGGACCACATGGC CTGTGTCCGCTCTCCGGAGCAGAAGGAGCAGGAGCGGCAGCACACCCAGC GTCGGCAGCAGAATCTCTTCTCGCTTCTCGTCCAAGCCAACGACAAGGCC GACGACACCGCGGGCTCGGGGGAGGTCGAGGAGGAGGGCGAGGGGAAGAA AAAGCGGGGGACGGTCGACCGACTTAAACTGCAGGAGTTGCTGGGTAATG CCTTCATCTTCCTTCTGGCGGGCCACGAGACGTCGGCGCACACGCTGATT TGGGCCCTCCTCCTCCTCGCCCTCCACCCCGACGAACAAGCAGTCGCCCA CGAGGAGGTCATCCGGGTACTCGGCTCGCCCGCCCTCCCTTCCGACTCCT CCGACCCTTCTTCCTCCCCCCTTCCCTCAATGACGTACGACCAGCTCTCC CTCCTCCCCTACTGCCAAGGCGTCATGAACGAAGCCCTCCGCCTCTTTCC CCCGGTCACCATGATCCCCAAGGTCTGTTCCGCCGACACCACCCTCACCC TCCCTCCCTCCTCCTCCTCTCCCTCCTCCTCTTCTTCTTCGTTCCGAATT CCCAAGGGGGTCAATGTTTTTCTGAATCTCTATGCTCTGCACCGCAATCC GAAGCACTACGCCGAGCCCAACGCTTTCAAGCCGCGCCGGTGGGTGAAGC CGGAGGGGAAGGCGGAAGGGGAGGCGAAGGGGAAGGCGGAGGGGAAGGAA GGGGGAGAAGAGGAGCAGTTCGTGGGCATTGACTACTTTGCATTCGCGCC CTTTAGCCTGGGCGAGAGGAGCTGCTTGGGGAGGAAGTTCGGACAGATCA CCGTCATGGCCTCCTTAGCTCTGCTGTTGCAGCGGTACGAGGTAGGGGTG GGGGGGGGGAGGGAGGGAGGAAAGGAGGGGGAGAGGTGGGAGGAGCGGAA GGCCCGGATGTTAAAGACGAAAAATATGCTGACGCTATGCCCGAAGGACA TGGGGGTGCAGCTGGTGTTTACCAGAAGATAG back to top
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