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Properties
| Property Name | Value |
|---|
| TranscriptId | 355248 |
| Track | FilteredModels2 |
| ProteinId | 355162 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:55600..59894 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10712 ID=mRNA_10712|Name=jgi.p|Nanoce1779_2|355162|organism=Nannochloropsis oceanica|type=mRNA|length=1355bp
TGTAAGTAGCCTTCCGCTCCAGACAAAGCATTGTGTGGTGCAGTCCCACA
TCGGAACAGACAGCGTCGTGCTGGAGGAGACATTTCAATAGTCCTGCCTC
GGGCTCTTCAAGCCCTTGATCGGCACACTACCCCATCTGTCCTCTACTAC
TTGGACCAAGGAAGACAGCATGGTTTTTCGAAAGAACCAATAGTGTCTGA
ACACGACATCTCAAGGGGCAAAGAGGCCAACGGAGCACTAGGGGAGGGGG
AGGATGTACGGGTCCGCCTCTCTTTACCACCGAGCAGGGGGGCCGTGTCA
AGTGGGGATCAGTGCCAGGAGCACTAATGAGGTCAGCAGCAGGAGCAAAA
GCAGTGAAGCCTGGGAAGATGAGCGCAAAGGCAAGACAGGCGGAGGGGGT
GCAGGCAAGGGGCTTTCCACCCTTCTATCCATGGGCGAGGGATATGGCGT
GCACGTTCAGCAGCAAGAGCCGCAGAAGCAGTCCTCTTTGACCGCCTTCC
AGCCGCAGTTCTATGTGCAGCAGCGCTCCCAAGGCCACGGGCAGGTAGGC
CAGGCCCTTTCCAATCTCTCCCTCTACCCACCGCCGGTGCAGCACTACAG
CATCAGCAGCAGCCAGCAGCACCTGCATCCACCCCACGCCCTCCAGTTGG
CCTCCAACTCCTCCTGCTTCATTCGTCCTCCTGTTCGGACCACCACTACC
ACGACCCGCACTTTTCTCCCTCTTTCTTCCATTGTGAGCCACCCTTCCTC
GTCTTCTTCTTCCTCCTCTTCCTCCTCCCCCACCGTCCCTGCCTTGCCGG
CGGCCTCCGCGTCGGGGAAACGGTCGAGAGAAAATGACGGAGGAGAACGA
GGAGGAGGAGGAGGAGGAGGAGGAGGTGGGAAGGGGGCTCCAAATCAGGG
AGTGTGGTCGGCAGCCTTGCGGACTGAGTACCGAGGATGGCTGCAGCTAA
ACAGGGGTATAAGTAAAGAGACTTCCATCACCTACTCCCATGCCGTCCAT
GGTGTCTTGAAGGAGCTCGTCGTCAAGCGGGTCCGCGAGGGCCGTGTCGG
ACAGCCGACTCACGGGATGGACGTGGCCCAGCTCCAGGCTCTGATTGAAG
AGCAAGCGCATGAGGCGGAGCGCATCATCAAGAGGGACAAGCGCTCTTCC
TACTTCCGGTACCTTAAGGAGTTCATGGGCATGCAGGGGAGGGATGGTCA
CCGTCGTCGTTTCAGATGTTCCTGCAGAGTGGAATGATGAATGAGGATGA
AGGAGGAAGAGGAGAAGAAGGAGGAGAAAGAGGGGGAGAAGGTAGGAGGA
GGTAGAGGAGGAGTGACGGCTGACGGTTCCGGTTGTGCGATGCATTCAGA
TGCAG back to topprotein sequence of jgi.p|Nanoce1779_2|355162 >mRNA_10712-protein ID=mRNA_10712-protein|Name=jgi.p|Nanoce1779_2|355162|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp
MYGSASLYHRAGGPCQVGISARSTNEVSSRSKSSEAWEDERKGKTGGGGA
GKGLSTLLSMGEGYGVHVQQQEPQKQSSLTAFQPQFYVQQRSQGHGQVGQ
ALSNLSLYPPPVQHYSISSSQQHLHPPHALQLASNSSCFIRPPVRTTTTT
TRTFLPLSSIVSHPSSSSSSSSSSSPTVPALPAASASGKRSRENDGGERG
GGGGGGGGGKGAPNQGVWSAALRTEYRGWLQLNRGISKETSITYSHAVHG
VLKELVVKRVREGRVGQPTHGMDVAQLQALIEEQAHEAERIIKRDKRSSY
FRYLKEFMGMQGRDGHRRRFRCSCRVE* back to topmRNA from alignment at scaffold_58:55600..59894- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10712 ID=mRNA_10712|Name=jgi.p|Nanoce1779_2|355162|organism=Nannochloropsis oceanica|type=mRNA|length=4295bp|location=Sequence derived from alignment at scaffold_58:55600..59894- (Nannochloropsis oceanica)
TGTAAGTAGCCTTCCGCTCCAGACAAAGCATTGTGTGGTGCAGTCCCACA
TCGGAACAGACAGCGTCGTGCTGGAGGAGACATTTCAATAGTCCTGCCTC
GGGCTCTTCAAGCCCTTGATCGGCACACTACCCCATCTGTCCTCTACTAC
TTGGACCAAGGAAGACAGCATGGTTTTTCGAAAGGTATTTGTGGCCGTGT
CTTTCACGTTAAACTACACACATGGGGCACCTAGACTGCTTGCCGAAAAG
CCCGAGCCCGAAAAAATTATCAGGCTTTGAAGCGTCGGGCTGACATGACA
AAGAGAACTCCCTCTCACCCTCACCGTCCCACAGAGAGTTTTCCTTCAGG
TCCTACTGTACCTGCCTGTTTGCGTTTCGGCGTTTGGCAGGCCACAATGG
CCATACAAGGCCAACACACCGAAGCGACGATTCGCACCGGATCCCTCGCT
CTGCCGGCGGGCGCTCTTTTTTGCATACTTAGGTATTTCGGCAAATAGCC
AAAGCTCATGAAAACTAACTATCTCTATCTTTCCCATTACAAATTCCTCA
GCAGAACCAATAGTGTCTGAACACGACATCTCAAGGGGCAAAGAGGCCAA
CGGAGCACTAGGGGAGGGGGAGGATGTACGGGTCCGCCTCTCTTTACCAC
CGAGCAGGGGGGCCGTGTCAAGTGGGGATCAGTGCCAGGAGCACTAATGA
GGTCAGCAGCAGGAGCAAAAGCAGTGAAGCCTGGGAAGATGAGCGCAAAG
GCAAGACAGGCGGAGGGGGTGCAGGCAAGGGGCTTTCCACCCTTCTATCC
ATGGGCGAGGGATATGGCGTGCACGTTCAGCAGCAAGAGCCGCAGAAGCA
GTCCTCTTTGACCGCCTTCCAGCCGCAGTTCTATGTGCAGCAGCGCTCCC
AAGGCCACGGGCAGGTAGGCCAGGCCCTTTCCAATCTCTCCCTCTACCCA
CCGCCGGTGCAGCACTACAGCATCAGCAGCAGCCAGCAGCACCTGCATCC
ACCCCACGCCCTCCAGTTGGCCTCCAACTCCTCCTGCTTCATTCGTCCTC
CTGTTCGGACCACCACTACCACGACCCGCACTTTTCTCCCTCTTTCTTCC
ATTGTGAGCCACCCTTCCTCGTCTTCTTCTTCCTCCTCTTCCTCCTCCCC
CACCGTCCCTGCCTTGCCGGCGGCCTCCGCGTCGGGGAAACGGTCGAGAG
AAAATGACGGAGGAGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGG
AAGGGGGCTCCAAATCAGGGAGTGTGGTCGGCAGCCTTGCGGACTGAGTA
CCGAGGATGGCTGCAGCTAAACAGGGGTATAAGTAAAGAGGTGAGGAGTG
AGGAGGGGAAGGAGGAGGCGGCATGCATATACCTATCAAGCCAAGCCCGC
CGACATCGAATCGAAATCACACTGACTTGACCTAACCTCCTCCCTCCCTC
CTTCCTCCCTAGACTTCCATCACCTACTCCCATGCCGTCCATGGTGTCTT
GAAGGAGCTCGTCGTCAAGCGGGTCCGCGAGGGCCGTGTCGGACAGGTGG
GTAGGGAGGGAGGGAGGAGAAAGGAGGAAGGGAGGGAGCGATATGATGGA
AATCGTCTGCCCCGTCTGACCGTCTGTCTGCTCGAAGCGCCCTTTGACCT
CCCCTCGCACCCTCCCTCCCTCCCTGCGTAGCCGACTCACGGGATGGACG
TGGCCCAGCTCCAGGCTCTGATTGAAGAGCAAGCGCATGAGGCGGAGCGC
ATCATCAAGAGGGACAAGCGCTCTTCCTACTTCCGGTACCTTAAGGAGTT
CATGGGCATGCAGGTAGGGAGGGAGGGAGGAAGAAAGGGGGAGGGTAGTT
GCTTTCTATCGATGGCTCTCGCCGCGGGATGTACTTTCATGAAGTGCCTC
TTGTCACGTGGCTGTCCTCCTTTTCTCGCTTCCTCGAAACAGGAGGACGA
TCTGAACGCATTCAATGTGGCGGCCCTTCCCTCCTCCTCCTTCCAGCCCT
TCTCCTACGCCTCCTCCAATACCTCCACCAGCTCCTCCGCCTCCCTCCCT
CCCACCCACACAGACGAACACCACAACGCCTCCTGCTCCTCCTTCTCCTC
TTCGCCCTCCCTCCCTCCCTCCTCCTCACCCCCTACCTCCATCCCGTCCT
CCGTGTCTTCGTTCCTGCTGCAGCAACAGGCAGGGGACGAAACGGCGAGA
GCAGGTGAGCAAGCGAAGGCATATATCCCTCCCTCCCTCTCCCTCCCTCC
CTCTTTCCCTCCCCCCCTCTCTCGGTTTTATCCTTATCTATCCTTTTCTC
TGGTCATCCACTGACCTCCCTCCCTCCTTCCCTCTCTCCTCCCTTCCCTC
TCTCCCTCCCTCTTTCCCTCCCTCCTTCCCCCCCTCCCTCTCTCTCCCAG
GCACTGACACGCCTCTATGGTCGCCGGCCCTCCAACAGGAATATCACAGA
TGGCTGGAGGGTAGGAGGGAGGAAGGGGGGTGGGGGCTGGGGGAGGCGCC
GTGGGAGGACGTTTTGACGCACGTGCAGATGGCCCATGTCTTGCTGCGGA
AGGTAAAGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGATCGAGGGGGTGG
GGAAATCGCATACAACCATACAAAACGGTGGGCATGACCTCTCCGTATGG
TGAGGAGCAGCTGTTCACCTTTCGGTCTCTCTCCCCGCCCTCCCTCCCTC
CCTCTCTCCCTCCCTCAGGTTTTTGCCGACGAACTGTCACGCGATCCCAA
GGCCGCCCGGGCCTACGCGAAGCTCGGCCGAGAGGAACTAGGTAAGGGGG
GAGGGAGGGAGGGAGGGGGGGAGGGAGAGAGAGAGGGAGGGGGGAGGAGA
CAAATCTTACCACAGGCCCATCACCAGTTGCTCAGCCCGTCCGTCGCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCACAGGCACTACGCTCAAAGCCC
TCATTGTCCGCAAGCCGGGCCTCCTCGCACGTGTTATCAAAGGTCCCCGA
AACCGGCGTTTCTTCCAGGTACGCCTCTCCCTCCCTCCCTTTCTCCCTCC
CTCCCTCCCTCCCTCCTTTCCTCCCTCCCTCCTTATAAGTTCTCACATCG
GCCAATCTACCTTCTCTACCATCTTCCTCCCTCCCTCCCTCCCTCCCTCC
CTCTTTCCTCCTTCCCATAGCCGGTGACCACCTTTTTCGGCCTCTCCCCC
CACCCCTCCTCCCTCTCCCCGCCCCTCGTCGCTCCCTCCCTCCAACCTTC
TCACTCCTCGTCCTCCATCACCTCCTCCTCTCCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCGTCCCTGTCTGGAGCGACGAGCTGCGGTGCGCCTAC
AAGCGGCGACTGGTCATGGACCTGGGCTGTGGCGAAAGTGAAGTCTCCTC
TAACATGCAGGTAAGGAAAGAGGGAGAGAAGGAGGGCTCAGGGGAGGAAG
GGAAGAAAGGAGGGGGATGGCTGTATGCTAATTTACCTTCTGTTCGGCCT
CATCCTCCCTACCTTTTTCCCTCCCTCCCTCGTCCAGTCTGCCGTGGCGC
TCCTTCGATCCCTGCTTGAGCGTCGGGCCGCGCGTCGAGAAGGAGGCCGT
TTTTCGTCCCTCACTCGAACGGAGGCTGCGGCCTTGCTGCGGGAGGAAGG
GGGAGGAGGGGAGGGATGGTCACCGTCGTCGTTTCAGATGTTCCTGCAGA
GTGGAATGATGAATGAGGATGAGCAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGGAGAAGAAGAGGTGGGGGAAACGGAGAAAGAAGAGGAAGAGGAAGA
GGAAATGCAGGCAGAGAGGGAAGGACCCCTTCACCCGCACCCCTCGTCCT
CCTTCGTCTCCGCCTCCGCCTCCTCCCCCTCCTCCTTGGGCTGTATAAAG
TGCAGTGAGCTTCAGCAGGAGCGAGATATGTGGGCACAGCGAGCCTCTGC
CTTGCAATGCCGGGTCCTCGAGCTCGAACGTACTCTCCGTGCCTCCTGCC
CTCCCGTCTCCCCTCCCCCCTCTCCCGCCAGCAGAAATTGCAGCGGCGTC
GACAGCGTCAGCAGCAGCAACAGCAGCAATAGGAAGAAGAAGAAGCGGCA
TTTTGTGTCTACTCTGCCGCCGCTTGGAGGAGAAGGAAGAGGAAGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGAAGAGGAAGAGGAGGAAGA
GGAGAAGAAGGAGGAGAAAGAGGGGGAGAAGGTAGGAGGAGGTAGAGGAG
GAGTGACGGCTGACGGTTCCGGTTGTGCGATGCATTCAGATGCAG back to topCoding sequence (CDS) from alignment at scaffold_58:55600..59894- >mRNA_10712 ID=mRNA_10712|Name=jgi.p|Nanoce1779_2|355162|organism=Nannochloropsis oceanica|type=CDS|length=3936bp|location=Sequence derived from alignment at scaffold_58:55600..59894- (Nannochloropsis oceanica)
GGGAGGGATGGTCACCGTCGTCGTTTCAGATGTTCCTGCAGAGTGGAATG
ACCGACTCACGGGATGGACGTGGCCCAGCTCCAGGCTCTGATTGAAGAGC
AAGCGCATGAGGCGGAGCGCATCATCAAGAGGGACAAGCGCTCTTCCTAC
TTCCGGTACCTTAAGGAGTTCATGGGCATGCAGACTTCCATCACCTACTC
CCATGCCGTCCATGGTGTCTTGAAGGAGCTCGTCGTCAAGCGGGTCCGCG
AGGGCCGTGTCGGACAGATGTACGGGTCCGCCTCTCTTTACCACCGAGCA
GGGGGGCCGTGTCAAGTGGGGATCAGTGCCAGGAGCACTAATGAGGTCAG
CAGCAGGAGCAAAAGCAGTGAAGCCTGGGAAGATGAGCGCAAAGGCAAGA
CAGGCGGAGGGGGTGCAGGCAAGGGGCTTTCCACCCTTCTATCCATGGGC
GAGGGATATGGCGTGCACGTTCAGCAGCAAGAGCCGCAGAAGCAGTCCTC
TTTGACCGCCTTCCAGCCGCAGTTCTATGTGCAGCAGCGCTCCCAAGGCC
ACGGGCAGGTAGGCCAGGCCCTTTCCAATCTCTCCCTCTACCCACCGCCG
GTGCAGCACTACAGCATCAGCAGCAGCCAGCAGCACCTGCATCCACCCCA
CGCCCTCCAGTTGGCCTCCAACTCCTCCTGCTTCATTCGTCCTCCTGTTC
GGACCACCACTACCACGACCCGCACTTTTCTCCCTCTTTCTTCCATTGTG
AGCCACCCTTCCTCGTCTTCTTCTTCCTCCTCTTCCTCCTCCCCCACCGT
CCCTGCCTTGCCGGCGGCCTCCGCGTCGGGGAAACGGTCGAGAGAAAATG
ACGGAGGAGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGGAAGGGG
GCTCCAAATCAGGGAGTGTGGTCGGCAGCCTTGCGGACTGAGTACCGAGG
ATGGCTGCAGCTAAACAGGGGTATAAGTAAAGAGGGGAGGGATGGTCACC
GTCGTCGTTTCAGATGTTCCTGCAGAGTGGAATGACCGACTCACGGGATG
GACGTGGCCCAGCTCCAGGCTCTGATTGAAGAGCAAGCGCATGAGGCGGA
GCGCATCATCAAGAGGGACAAGCGCTCTTCCTACTTCCGGTACCTTAAGG
AGTTCATGGGCATGCAGACTTCCATCACCTACTCCCATGCCGTCCATGGT
GTCTTGAAGGAGCTCGTCGTCAAGCGGGTCCGCGAGGGCCGTGTCGGACA
GATGTACGGGTCCGCCTCTCTTTACCACCGAGCAGGGGGGCCGTGTCAAG
TGGGGATCAGTGCCAGGAGCACTAATGAGGTCAGCAGCAGGAGCAAAAGC
AGTGAAGCCTGGGAAGATGAGCGCAAAGGCAAGACAGGCGGAGGGGGTGC
AGGCAAGGGGCTTTCCACCCTTCTATCCATGGGCGAGGGATATGGCGTGC
ACGTTCAGCAGCAAGAGCCGCAGAAGCAGTCCTCTTTGACCGCCTTCCAG
CCGCAGTTCTATGTGCAGCAGCGCTCCCAAGGCCACGGGCAGGTAGGCCA
GGCCCTTTCCAATCTCTCCCTCTACCCACCGCCGGTGCAGCACTACAGCA
TCAGCAGCAGCCAGCAGCACCTGCATCCACCCCACGCCCTCCAGTTGGCC
TCCAACTCCTCCTGCTTCATTCGTCCTCCTGTTCGGACCACCACTACCAC
GACCCGCACTTTTCTCCCTCTTTCTTCCATTGTGAGCCACCCTTCCTCGT
CTTCTTCTTCCTCCTCTTCCTCCTCCCCCACCGTCCCTGCCTTGCCGGCG
GCCTCCGCGTCGGGGAAACGGTCGAGAGAAAATGACGGAGGAGAACGAGG
AGGAGGAGGAGGAGGAGGAGGAGGTGGGAAGGGGGCTCCAAATCAGGGAG
TGTGGTCGGCAGCCTTGCGGACTGAGTACCGAGGATGGCTGCAGCTAAAC
AGGGGTATAAGTAAAGAGGGGAGGGATGGTCACCGTCGTCGTTTCAGATG
TTCCTGCAGAGTGGAATGACCGACTCACGGGATGGACGTGGCCCAGCTCC
AGGCTCTGATTGAAGAGCAAGCGCATGAGGCGGAGCGCATCATCAAGAGG
GACAAGCGCTCTTCCTACTTCCGGTACCTTAAGGAGTTCATGGGCATGCA
GACTTCCATCACCTACTCCCATGCCGTCCATGGTGTCTTGAAGGAGCTCG
TCGTCAAGCGGGTCCGCGAGGGCCGTGTCGGACAGATGTACGGGTCCGCC
TCTCTTTACCACCGAGCAGGGGGGCCGTGTCAAGTGGGGATCAGTGCCAG
GAGCACTAATGAGGTCAGCAGCAGGAGCAAAAGCAGTGAAGCCTGGGAAG
ATGAGCGCAAAGGCAAGACAGGCGGAGGGGGTGCAGGCAAGGGGCTTTCC
ACCCTTCTATCCATGGGCGAGGGATATGGCGTGCACGTTCAGCAGCAAGA
GCCGCAGAAGCAGTCCTCTTTGACCGCCTTCCAGCCGCAGTTCTATGTGC
AGCAGCGCTCCCAAGGCCACGGGCAGGTAGGCCAGGCCCTTTCCAATCTC
TCCCTCTACCCACCGCCGGTGCAGCACTACAGCATCAGCAGCAGCCAGCA
GCACCTGCATCCACCCCACGCCCTCCAGTTGGCCTCCAACTCCTCCTGCT
TCATTCGTCCTCCTGTTCGGACCACCACTACCACGACCCGCACTTTTCTC
CCTCTTTCTTCCATTGTGAGCCACCCTTCCTCGTCTTCTTCTTCCTCCTC
TTCCTCCTCCCCCACCGTCCCTGCCTTGCCGGCGGCCTCCGCGTCGGGGA
AACGGTCGAGAGAAAATGACGGAGGAGAACGAGGAGGAGGAGGAGGAGGA
GGAGGAGGTGGGAAGGGGGCTCCAAATCAGGGAGTGTGGTCGGCAGCCTT
GCGGACTGAGTACCGAGGATGGCTGCAGCTAAACAGGGGTATAAGTAAAG
AGGGGAGGGATGGTCACCGTCGTCGTTTCAGATGTTCCTGCAGAGTGGAA
TGACCGACTCACGGGATGGACGTGGCCCAGCTCCAGGCTCTGATTGAAGA
GCAAGCGCATGAGGCGGAGCGCATCATCAAGAGGGACAAGCGCTCTTCCT
ACTTCCGGTACCTTAAGGAGTTCATGGGCATGCAGACTTCCATCACCTAC
TCCCATGCCGTCCATGGTGTCTTGAAGGAGCTCGTCGTCAAGCGGGTCCG
CGAGGGCCGTGTCGGACAGATGTACGGGTCCGCCTCTCTTTACCACCGAG
CAGGGGGGCCGTGTCAAGTGGGGATCAGTGCCAGGAGCACTAATGAGGTC
AGCAGCAGGAGCAAAAGCAGTGAAGCCTGGGAAGATGAGCGCAAAGGCAA
GACAGGCGGAGGGGGTGCAGGCAAGGGGCTTTCCACCCTTCTATCCATGG
GCGAGGGATATGGCGTGCACGTTCAGCAGCAAGAGCCGCAGAAGCAGTCC
TCTTTGACCGCCTTCCAGCCGCAGTTCTATGTGCAGCAGCGCTCCCAAGG
CCACGGGCAGGTAGGCCAGGCCCTTTCCAATCTCTCCCTCTACCCACCGC
CGGTGCAGCACTACAGCATCAGCAGCAGCCAGCAGCACCTGCATCCACCC
CACGCCCTCCAGTTGGCCTCCAACTCCTCCTGCTTCATTCGTCCTCCTGT
TCGGACCACCACTACCACGACCCGCACTTTTCTCCCTCTTTCTTCCATTG
TGAGCCACCCTTCCTCGTCTTCTTCTTCCTCCTCTTCCTCCTCCCCCACC
GTCCCTGCCTTGCCGGCGGCCTCCGCGTCGGGGAAACGGTCGAGAGAAAA
TGACGGAGGAGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGGAAGG
GGGCTCCAAATCAGGGAGTGTGGTCGGCAGCCTTGCGGACTGAGTACCGA
GGATGGCTGCAGCTAAACAGGGGTATAAGTAAAGAG back to top
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