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Properties
| Property Name | Value |
|---|
| TranscriptId | 668099 |
| Track | FilteredModels2 |
| ProteinId | 668013 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1144772..1148424 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1070 ID=mRNA_1070|Name=jgi.p|Nanoce1779_2|668013|organism=Nannochloropsis oceanica|type=mRNA|length=3175bp
AGACAGGCATTTATCAGCCAGACGTCCTAGGCAGGTGACACGATAAAAGG
GTTAGACGCCCGCTTGGCGAGGGCAATAGCATCCCTTCAACCCAGCGTCC
ACCAGGCACAGCCATGGCAGCCACGGACGAACTGGATGACATCCTAAACG
ATGCCCTCGACGAGCTAGACGAGGAAGACGAAGAGGAGGCGCAAGCTCGA
AAGCACACTGGCATTAGCTGCAGCGCCTCTACAGAAGCAGCAGGAGCAAT
GTCAACTGCAGGAGCGTCATTCCAGCCCTCCGCCTTCTCCGCGGGAGCCA
AGTCTGCTGGCCCCATCGAAGCTACCGCCGCAGGAACGAGCTCAGGACAA
TCTACGTCGTCGGATGCGGCAGGAGTGGGAAGGGAAGGGGATGAAGAGGA
AACGGAGTTACGGAATACGATTGCCAAGACCATTGACATGCTGGGCAAGA
TTGGAGGCGGGGAAGGGGGTAAGGAAGCAGGAGAAGGTAAGGAAATGATT
GACGATGCATTTTTGAGTAAATTGGTGGAGGAGTTCGACAAATTGGGTGC
TGGATTCGGGGACGGAGGAGGAGGGAAGGAGGGAGGAGGAGAAGCATGTG
ATGGGGGTAATGAGGGAGGGACTGATGCGATGGTCGACACGATGGTGAGG
CAGTTGCTGGCGAAGGATTTGATGTACCCGCCATTGAAGGAGGTTGTACG
ACAATTCCCTGGCTGGTTGGAGGCTAACAAGGGCAAGGTGGAGGAAGAGG
TGTACAAGAAGCATGAAAAGCAATATTTTTTGTTCGAACGGATCGTGGCC
GTGTATGAGAAGGAGGGGGAGGGAGGGAAGGAGGGGGGGGATATGGCATT
ATTGCTAGATTTGATGACACAGGCGCAGGATTATGGCCAGCCGCCGGCGG
AGATTGTGCAGGCATTGGGAGGAGGAGGCATGGATGGAGGGATTGATCCT
TTTGGAGGGATGGGAGGAGGGATGGGAGGGCTGTTGAGTGCGGCGTTGGC
GGGAGGAGGGGGAGGGGGGGGAGGGAGGGGAGGGGGAGCAGTGTTGTGTG
ATCCCAACGCCATGGCCGATCCCCCATAACTCTCACCCTTATGCTGCTTC
ACGTTCACTTCCCCTTCTCCCCCTGGCCCTCCTCCTCTATCCTCCCCTCC
TTCCCTCCCTCCTTCCCTCCCTCATCATCCATCTGTCCTCGTGCTACCCT
TGCCGCCTCTTCCGCCACCACCCTCAGGGGCAAGCCCAACGCCATGGCGG
CGCCCCTACAATCTTCGTACTCCGGTTTCACATTCACCACCACCCCGTCC
ATTCGACCTATTTTAGCCCGCACCTCTCCATATCTTGTGGGCACCATCAC
GAAATCCCTCTCCAGCGCCAACCTCGCCACGGTATGTGCCCTCACCCCAA
GGGTGGGGGTCTCCAAGAACATGCACCGCAAGAGAGCAGGGGCAGTGGCC
GGTTCACACAAAAGGTGGAGGGTCAGGCCCGGGCGGCCTTTTTTCATAAC
GGCGGGCGTGTACCAGACGTCGAGGCAGCCTGGCTCAGACATTAACCGCT
CGAGGGCAAAAGAGGCAGTTTCGGGCGTCATATCGTCCAAGTTGGCCTCC
AATTCACACAAGTGCCGTTCTTCCCATCCTCCGGAAGACCAGGCAGAGCC
CGAGGAAGGTGGGATTGCATGTGTGTGTGTGGTGTGGGTGGTGGGGGGGT
GGAGGGCGGGAGGGCGGGTGATTGGATGGGAAGGCTCCCCTTTTTCGGAG
AGGTAACGAAGAGGTGATTGAGGGTGCTGCTGCTGACGACGGGTGCGGGG
TACCATCCCATCCTCCTCCCCCCCAGCATCAAAGGACGCCCGTCGGACCA
CCTCTCCCTCACGTCCCTCCTCCCCTTCCTCCAGCCTCCTTCCAATCACC
ACCCTCACCACATTCGCATGGCCCGGAAAATCCTTTGTCCCCGCTCCGAT
CCCCAACAACTCAGGTACAAAAATCGGGGGCTGTCCTACTCTCCCCTCAG
CCAAAACCTTGATCAAAGACGCCCCTGTTGGTGTGACGAGCTCGCCCATC
GCTCCCTTCGGACCCGGGGTGGTAGGCAAGCCGAGCATGAGCCGCAGGGT
GGCAGGGGTAGGGACAGCCAAGATCCCGTGGGCTGTCTCTCCGGTGAAGC
CCTCGCCAAAGGGCAAGGCGGAGGAATACACCTCCTCAACACCGAGCAGA
TGTAAGGCAAAGACGGAACCGACTGTGTCAATGATGCTGTCTACTGCGCC
AACTTCATGAAAATGGATCTCGTCGATACCCACTCCATGTGTCGCTGCCT
CTGCTTCTGCCAACGCGGTAAAAACGGCAATACTTTGTACACGGACCGAC
TCCGGGAGTCCTTCAGCGGCTTCGATCATGTCGCGGATAACATCGAGGTT
GCGAAGCGGGCCGTTGTGTTGATGATGGTGGTCGTGGACAATGTCTCCGT
GAGCATGGGTGTGGTAATGAGAGTGATCATCATGCGTACGGGTGCAACGT
CCTGCGAGGGCAGCGTGCGGATGATCCGCACCGCTGTGGTCGGGCGTGTG
GGTGTGGACATGCCCATGCGCGTGGGAGTGAGGGTGCGAGTGCGGATGGC
TGTGGGTTTCCCCCCCCTCGTGGCTGTCTAGGTGGGCGTGTGTATGCTTG
TGCTCGTGGTCGTGGTTGTGGCTGTGTTGATGCAAATTCTCTGCATCTGC
AGTCCGCGCGCTACCACCCGAAGAAACTTCCTCATGTCCGTAGATGGAGC
AGACCTTGATGTAGGTCGCAGCTATGTGCCCCTTGCTTCGCACCACATTT
TGCACATCCAAATTCCATTCTTCCGCCAGCGGCAAAATAGTCTTTAGGCC
CGCGACAAGCTGGTCTCGTGGAGCCCCCTATCAATGTGTGCGTGGGTGTG
GATGTTGTGGTCGTGAAGGACATTGAAGGCACACCGAACATTCTACGACG
ATGCAGGCAAGTTCCCTTACCGCGTCGAGCAATGCGCCCAGCAACATGTC
CCCGGCAACGCCGCATTTGCAGTCCAAGAACGCCACTTTCTTACCCCGCA
TCGGCATGGTCTTGTTGATGTGATTTTGTGCCTGTGGCTTGTTAGCAAGG
TGTAAGTTGTGGGTTGAAAGTTGTCTAATCGAACATAGAGGTGAAGCCGG
ACACTGGCGATGCCGGCGACTAGTT back to topprotein sequence of jgi.p|Nanoce1779_2|668013 >mRNA_1070-protein ID=mRNA_1070-protein|Name=jgi.p|Nanoce1779_2|668013|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MAATDELDDILNDALDELDEEDEEEAQARKHTGISCSASTEAAGAMSTAG
ASFQPSAFSAGAKSAGPIEATAAGTSSGQSTSSDAAGVGREGDEEETELR
NTIAKTIDMLGKIGGGEGGKEAGEGKEMIDDAFLSKLVEEFDKLGAGFGD
GGGGKEGGGEACDGGNEGGTDAMVDTMVRQLLAKDLMYPPLKEVVRQFPG
WLEANKGKVEEEVYKKHEKQYFLFERIVAVYEKEGEGGKEGGDMALLLDL
MTQAQDYGQPPAEIVQALGGGGMDGGIDPFGGMGGGMGGLLSAALAGGGG
GGGGRGGGAVLCDPNAMADPP* back to topmRNA from alignment at scaffold_2:1144772..1148424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1070 ID=mRNA_1070|Name=jgi.p|Nanoce1779_2|668013|organism=Nannochloropsis oceanica|type=mRNA|length=3653bp|location=Sequence derived from alignment at scaffold_2:1144772..1148424- (Nannochloropsis oceanica)
AGACAGGCATTTATCAGCCAGACGTCCTAGGCAGGTGACACGATAAAAGG
GTTAGACGCCCGCTTGGCGAGGGCAATAGCATCCCTTCAACCCAGCGTCC
ACCAGGCACAGCCATGGCAGCCACGGACGAACTGGATGACATCCTAAACG
ATGCCCTCGACGAGCTAGACGAGGAAGACGAAGAGGAGGCGCAAGCTCGA
AAGCACACTGGCATTAGCTGCAGCGCCTCTACAGAAGCAGCAGGAGCAAT
GTCAACTGCAGGAGCGTCATTCCAGCCCTCCGCCTTCTCCGCGGGAGCCA
AGTCTGCTGGCCCCATCGAAGCTACCGCCGCAGGAACGAGCTCAGGACAA
TCTACGTCGTCGGATGCGGCAGGAGTGGGAAGGGAAGGGGATGAAGAGGA
AACGGAGTTACGGAATACGATTGCCAAGACCATTGACATGCTGGGCAAGA
TTGGAGGCGGGGAAGGGGGTAAGGAAGCAGGAGAAGGTAAGGAAATGATT
GACGATGCATTTTTGAGTAAATTGGTGGAGGAGTTCGACAAATTGGGTGC
TGGATTCGGGGACGGAGGAGGAGGGAAGGAGGGAGGAGGAGAAGCATGTG
ATGGGGGTAATGAGGGAGGGACTGATGCGATGGTCGACACGATGGTGAGG
CAGTTGCTGGCGAAGGATTTGATGTACCCGCCATTGAAGGAGGTTGTACG
ACAATTCCCTGGCTGGTTGGAGGCTAACAAGGGCAAGGTGGAGGAAGAGG
TGTACAAGAAGCATGAAAAGCAATATTTTTTGTTCGAACGGATCGTGGCC
GTGTATGAGAAGGAGGGGGAGGGAGGGAAGGAGGGGGGGGATATGGCATT
ATTGCTAGATTTGATGACACAGGCGCAGGATTATGGCCAGCCGCCGGCGG
AGATTGTGCAGGCATTGGGAGGAGGAGGCATGGATGGAGGGATTGATCCT
TTTGGAGGGATGGGAGGAGGGATGGGAGGGCTGTTGAGTGCGGCGTTGGC
GGGAGGAGGGGGAGGGGGGGGAGGGAGGGGAGGGGGAGCAGTGTTGTGTG
ATGTAAGGTGTGTAATGAAAGATGTTGGAAGGATCAGGCTGACAAATGAT
GTTGCGGATGGGAGACGAAGGGAAGGAGTAAAGGAGGGTGGAGTGAAGAG
GGAGGTATGTACGTATCCAGCCAAAGAACACCGCAACAGAGAAAGGGGAA
ATGACAGTTGATATGATCGCTATTTCTTCTCCTCCTTCTAATCTGTTGAT
CACCAGCTCCCTCTCTCGAAATGCCACCCATCCAGCACCAATCGATTCTC
CTCTTTATCTTCCTTTCTTTCTTGTTTTCTATCTCCTTCTCGTCTTGGCT
GTCGCACTTGAGTTTCTTCTCCTCGCTCTCCTCACACTCCCCTGTCATCC
CTCCCGGCCAGCCCCCCTCGCAATATCCACCTCTACTGTCTTTCCTCCCC
CTCTCAAATCCTTCCCTATTTCCCGCCCCATGCTCATGCCCCCCTCTCCG
TCTCCTCCGCCACCACCCCTAAAATGGAAGCCCAACGCCATGGCCGATCC
CCCATAACTCTCACCCTTATGCTGCTTCACGTTCACTTCCCCTTCTCCCC
CTGGCCCTCCTCCTCTATCCTCCCCTCCTTCCCTCCCTCCTTCCCTCCCT
CATCATCCATCTGTCCTCGTGCTACCCTTGCCGCCTCTTCCGCCACCACC
CTCAGGGGCAAGCCCAACGCCATGGCGGCGCCCCTACAATCTTCGTACTC
CGGTTTCACATTCACCACCACCCCGTCCATTCGACCTATTTTAGCCCGCA
CCTCTCCATATCTTGTGGGCACCATCACGAAATCCCTCTCCAGCGCCAAC
CTCGCCACGGTATGTGCCCTCACCCCAAGGGTGGGGGTCTCCAAGAACAT
GCACCGCAAGAGAGCAGGGGCAGTGGCCGGTTCACACAAAAGGTGGAGGG
TCAGGCCCGGGCGGCCTTTTTTCATAACGGCGGGCGTGTACCAGACGTCG
AGGCAGCCTGGCTCAGACATTAACCGCTCGAGGGCAAAAGAGGCAGTTTC
GGGCGTCATATCGTCCAAGTTGGCCTCCAATTCACACAAGTGCCGTTCTT
CCCATCCTCCGGAAGACCAGGCAGAGCCCGAGGAAGGTGGGATTGCATGT
GTGTGTGTGGTGTGGGTGGTGGGGGGGTGGAGGGCGGGAGGGCGGGTGAT
TGGATGGGAAGGCTCCCCTTTTTCGGAGAGGTAACGAAGAGGTGATTGAG
GGTGCTGCTGCTGACGACGGGTGCGGGGTACCATCCCATCCTCCTCCCCC
CCAGCATCAAAGGACGCCCGTCGGACCACCTCTCCCTCACGTCCCTCCTC
CCCTTCCTCCAGCCTCCTTCCAATCACCACCCTCACCACATTCGCATGGC
CCGGAAAATCCTTTGTCCCCGCTCCGATCCCCAACAACTCAGGTACAAAA
ATCGGGGGCTGTCCTACTCTCCCCTCAGCCAAAACCTTGATCAAAGACGC
CCCTGTTGGTGTGACGAGCTCGCCCATCGCTCCCTTCGGACCCGGGGTGG
TAGGCAAGCCGAGCATGAGCCGCAGGGTGGCAGGGGTAGGGACAGCCAAG
ATCCCGTGGGCTGTCTCTCCGGTGAAGCCCTCGCCAAAGGGCAAGGCGGA
GGAATACACCTCCTCAACACCGAGCAGATGTAAGGCAAAGACGGAACCGA
CTGTGTCAATGATGCTGTCTACTGCGCCAACTTCATGAAAATGGATCTCG
TCGATACCCACTCCATGTGTCGCTGCCTCTGCTTCTGCCAACGCGGTAAA
AACGGCAATACTTTGTACACGGACCGACTCCGGGAGTCCTTCAGCGGCTT
CGATCATGTCGCGGATAACATCGAGGTTGCGAAGCGGGCCGTTGTGTTGA
TGATGGTGGTCGTGGACAATGTCTCCGTGAGCATGGGTGTGGTAATGAGA
GTGATCATCATGCGTACGGGTGCAACGTCCTGCGAGGGCAGCGTGCGGAT
GATCCGCACCGCTGTGGTCGGGCGTGTGGGTGTGGACATGCCCATGCGCG
TGGGAGTGAGGGTGCGAGTGCGGATGGCTGTGGGTTTCCCCCCCCTCGTG
GCTGTCTAGGTGGGCGTGTGTATGCTTGTGCTCGTGGTCGTGGTTGTGGC
TGTGTTGATGCAAATTCTCTGCATCTGCAGTCCGCGCGCTACCACCCGAA
GAAACTTCCTCATGTCCGTAGATGGAGCAGACCTTGATGTAGGTCGCAGC
TATGTGCCCCTTGCTTCGCACCACATTTTGCACATCCAAATTCCATTCTT
CCGCCAGCGGCAAAATAGTCTTTAGGCCCGCGACAAGCTGGTCTCGTGGA
GCCCCCTATCAATGTGTGCGTGGGTGTGGATGTTGTGGTCGTGAAGGACA
TTGAAGGCACACCGAACATTCTACGACGATGCAGGCAAGTTCCCTTACCG
CGTCGAGCAATGCGCCCAGCAACATGTCCCCGGCAACGCCGCATTTGCAG
TCCAAGAACGCCACTTTCTTACCCCGCATCGGCATGGTCTTGTTGATGTG
ATTTTGTGCCTGTGGCTTGTTAGCAAGGTGTAAGTTGTGGGTTGAAAGTT
GTCTAATCGAACATAGAGGTGAAGCCGGACACTGGCGATGCCGGCGACTA
GTT back to topCoding sequence (CDS) from alignment at scaffold_2:1144772..1148424- >mRNA_1070 ID=mRNA_1070|Name=jgi.p|Nanoce1779_2|668013|organism=Nannochloropsis oceanica|type=CDS|length=1932bp|location=Sequence derived from alignment at scaffold_2:1144772..1148424- (Nannochloropsis oceanica)
CCCAACGCCATGGCCGATCCCCCATAAATGGCAGCCACGGACGAACTGGA
TGACATCCTAAACGATGCCCTCGACGAGCTAGACGAGGAAGACGAAGAGG
AGGCGCAAGCTCGAAAGCACACTGGCATTAGCTGCAGCGCCTCTACAGAA
GCAGCAGGAGCAATGTCAACTGCAGGAGCGTCATTCCAGCCCTCCGCCTT
CTCCGCGGGAGCCAAGTCTGCTGGCCCCATCGAAGCTACCGCCGCAGGAA
CGAGCTCAGGACAATCTACGTCGTCGGATGCGGCAGGAGTGGGAAGGGAA
GGGGATGAAGAGGAAACGGAGTTACGGAATACGATTGCCAAGACCATTGA
CATGCTGGGCAAGATTGGAGGCGGGGAAGGGGGTAAGGAAGCAGGAGAAG
GTAAGGAAATGATTGACGATGCATTTTTGAGTAAATTGGTGGAGGAGTTC
GACAAATTGGGTGCTGGATTCGGGGACGGAGGAGGAGGGAAGGAGGGAGG
AGGAGAAGCATGTGATGGGGGTAATGAGGGAGGGACTGATGCGATGGTCG
ACACGATGGTGAGGCAGTTGCTGGCGAAGGATTTGATGTACCCGCCATTG
AAGGAGGTTGTACGACAATTCCCTGGCTGGTTGGAGGCTAACAAGGGCAA
GGTGGAGGAAGAGGTGTACAAGAAGCATGAAAAGCAATATTTTTTGTTCG
AACGGATCGTGGCCGTGTATGAGAAGGAGGGGGAGGGAGGGAAGGAGGGG
GGGGATATGGCATTATTGCTAGATTTGATGACACAGGCGCAGGATTATGG
CCAGCCGCCGGCGGAGATTGTGCAGGCATTGGGAGGAGGAGGCATGGATG
GAGGGATTGATCCTTTTGGAGGGATGGGAGGAGGGATGGGAGGGCTGTTG
AGTGCGGCGTTGGCGGGAGGAGGGGGAGGGGGGGGAGGGAGGGGAGGGGG
AGCAGTGTTGTGTGATCCCAACGCCATGGCCGATCCCCCATAAATGGCAG
CCACGGACGAACTGGATGACATCCTAAACGATGCCCTCGACGAGCTAGAC
GAGGAAGACGAAGAGGAGGCGCAAGCTCGAAAGCACACTGGCATTAGCTG
CAGCGCCTCTACAGAAGCAGCAGGAGCAATGTCAACTGCAGGAGCGTCAT
TCCAGCCCTCCGCCTTCTCCGCGGGAGCCAAGTCTGCTGGCCCCATCGAA
GCTACCGCCGCAGGAACGAGCTCAGGACAATCTACGTCGTCGGATGCGGC
AGGAGTGGGAAGGGAAGGGGATGAAGAGGAAACGGAGTTACGGAATACGA
TTGCCAAGACCATTGACATGCTGGGCAAGATTGGAGGCGGGGAAGGGGGT
AAGGAAGCAGGAGAAGGTAAGGAAATGATTGACGATGCATTTTTGAGTAA
ATTGGTGGAGGAGTTCGACAAATTGGGTGCTGGATTCGGGGACGGAGGAG
GAGGGAAGGAGGGAGGAGGAGAAGCATGTGATGGGGGTAATGAGGGAGGG
ACTGATGCGATGGTCGACACGATGGTGAGGCAGTTGCTGGCGAAGGATTT
GATGTACCCGCCATTGAAGGAGGTTGTACGACAATTCCCTGGCTGGTTGG
AGGCTAACAAGGGCAAGGTGGAGGAAGAGGTGTACAAGAAGCATGAAAAG
CAATATTTTTTGTTCGAACGGATCGTGGCCGTGTATGAGAAGGAGGGGGA
GGGAGGGAAGGAGGGGGGGGATATGGCATTATTGCTAGATTTGATGACAC
AGGCGCAGGATTATGGCCAGCCGCCGGCGGAGATTGTGCAGGCATTGGGA
GGAGGAGGCATGGATGGAGGGATTGATCCTTTTGGAGGGATGGGAGGAGG
GATGGGAGGGCTGTTGAGTGCGGCGTTGGCGGGAGGAGGGGGAGGGGGGG
GAGGGAGGGGAGGGGGAGCAGTGTTGTGTGAT back to top
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