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Properties
Property Name | Value |
TranscriptId | 150419 |
Track | FilteredModels2 |
ProteinId | 150333 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_2 | supercontig | scaffold_2:1138268..1141368 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1066 ID=mRNA_1066|Name=jgi.p|Nanoce1779_2|150333|organism=Nannochloropsis oceanica|type=mRNA|length=3101bp ACAGGATCTCATCGAGTTATTCTTAAGTTGATATTCATGAGCATCCGGGC TTGACTTCACTTTTCAAAAGACAGCAACATCACGCAATCATCATGTCCTC CCGGCCGCCCACAACGCCTTCCCGTGGAAACAGCGCCCCCCTCATGTGCA GTCCTTTTACGCCCAGGGCACGGCAGACAGCTTTGGACCGATTGCCGCAC CATTTGGGCTCCCTGAGCTTTGACACGGAGGATGGAGATGACGAGGATGT GGAGGAGATGATGTCCATGACCCCTTTGGAGTCGCAGCAGCAGCAGCCCC ACCTAACACTCAACAAAACACGCACTGTGTTGCCATTACCCGCAGCGTCG CCCACCACACAGCAGGCTCTGTCCCCGCGTGCATGGTCTCCGTCGTTCCG CCCGTCGACCCCGGTGGGGAAGGGGTTTCACCTGAACCCGCAAGACCTGA CGTTCGGGGATCGCTTGGCTGAAGGTGCTTATGGCGTGGTTTGGCTCGCT CGAATGCGTCGACCTCGTCGTGCTTCAGTAGGAGAGAAGGAGGAAGAGGT GGCTGTGAAAGTGCAAAGAGTTCCATGGAATGAACAAGAGCAGGCGAACC TTTTGATTGAATTGTCGATTCTGCATGGGTTGGTGCATCCGCGGCTGGTC CGTTACTATGGTGCAGCCTTGCTGTCGGAAGAGGAGGCGATGGGGAAGGA AGAATGGAGGCCATTGTTACACGGGCCTAAGAATCCGTTCTGTGAGGCGA GGGAGGAAGGATGGATTGTGGGGATGGAGAAGGAGGAGGAGAAAGGGAAG GGGGCGGACGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGAGGG AGAAGACACGATTCTCAAGGATAAGGTGGGCATTCACACCCTTTCCCGAC TCCAATCTCCCACTAACAACTCCCCCGTCCCCTTTCTCGTCCTCATCGCC ATGGAGCTGTGTCTCCACGGCTCCCTTCGCGATGCTCTCCACCCCTCCCT CCGCCCCGCCCGCCCCCCCACCCTCCCTCTCACCTGGCTCCACAAAGTTC GGATCGCCAGCGACATTGCCGAAGGTCTCACGTTTCTCCATGCCCATCAC CTGCTTCATCGCGACCTGAAAACCACCAACATCCTCCTCTCCTCCCTCCC TTCCTCCTCCTCCTCCCCCCGCGCCCAAATATGCGACCACGCATTCGTGT CCTCCTCCCTCTCGCCTGATATTTCCCTCTTTACCTGTGGGACCTTCGAA TTTCAAGCGCCCGAACTACTGCTGAACGAGCCTGGGGTGGTGATAGGCGA CAAGGTTGATGTCTTCAGCCTGGGAGTGATCCTGTGTGAAATGATCACGG GTACTATACCCGGAGGTGCTGCCGTGGGAGCGGAGGAGGGACGGGATGGA TGTGAGGAAGAGGGTGACATCAATACGAGGATAACCCTCCATGATTTGGC CGAGGGCGGGAGGGAGCGCGGGGTGGGGGGAATCTTCATGGAGCGCAGAG CCGAGGAGTTGTTCGCAGTCCGGGGGGAGGAGGTGGAGGAGAGAGTGTTG GAAGGTTGCCCCCCGTCGTTGTTGATGCTGGCGTTGCAGTGTGTGGGGCA GGAATGGGAGGACAGACCGACGGCCAGGGAGGCTTGGGAGTGGGCCGAGG CGCTGTGGAAGGAGATGAAGGAGGAGGAGGAGGGAGGGAGGGAGAGAGGG GTGCCGGTGGTGGAGGACGAGAGGTCGCCGTCGGAGGGAGGGGAGGAGGA AGGGAGGGGGGAAGGAGGAGAATGGGAAGAGATGGACTTAGAAGCTACAG GGGAGAGAGATGAAAGAGTGGATAGAGTGAGGGAGGTTGGCGGAAGCGGC AGCAACATCGACCGCAATCAGAGGCGTGCTGAGAGGAAGCGGAAGAAGAA ACGACGACAACAGCAACGACGACAGCGGCTGCTTCAGCAGCAGCAGCAGC AGCAGCAGCAACAACAACAACAACAGCAGCAACAACTCCAACAAGAGAGT AGAGGTGAAGGTGAAGATGAAAAGCAGCAGCAGCGTCAGTTGAAGGATGA TGCTTCCCAGAAACAGCCGGCGTCAACAGGAGCAGGACGGGGTGGTGGTG TTGGTGGTGGTGGTGAAGGAGGAGTAGGAGGAGGAGGAGGAGGAGGAGGA GAAGGAGGAGAAGAAGAACAAGAAGAAGAAGAGAGGCACCAAGGAGTAAC CATCACAGCGCCGGCTGCAGCTGCAGATGGATTCACAGGAAAAAGAAAAG AGGAGAAAGGGGGAGAAGGAAGAGGAGGAGAAGGAGGAGGAGGAGGAGGA GAAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGAAGCGTCGCGGGGC TCGACAGCGGAACAGAAAACAGGACCGTGACGAGAGCGACTTAAACCATT CATCCTCTATTCCTGGCATTCCTCCTCTTCCTCCCCCCTCGACCTCCCCC TCCCCCTCCTCCTCCCCCCCCCCTTCCCTCCCATCCCCTTCTTCCCCCCC TGCCCCCTCCGTGGAGCAACCCATCACCCAAGGGAGTGTGTTAGACTGCA AGATGCACTCGAAGCCTACCTCCTCATCCCGCTCCTCCTCCTCCTCTTTC CCTTCTTCCATCAAATTGGAAGATCCTCCCATCAACCATCCTCCACCTCC ATCTGAAGAGGAGAGGGAAGGGCGACAGGGGGGGAAAGAGGGGGAGGACT ACAGCCCCCTTCTCTCTTGTTGTCTTCAGTCCTGGGAGGAGCAATTGATG GTGGTCCAAAAGAAGATGGAGGGCGGGATAGATGCACTGAGGGAGGAAGC GGATGAGGGACTGAGGGAGGATGCCAGTGGGAGGTTGAGGAGGGTGCAAG GGATGATGAGGGAGGAAGTGTTGCCGTTGGTGGTGGCCATGCAGCAGGGG ATGGCGGCGATGCGTGCGAGGGTGGGGTAGAAGGAGGAGGAGGGAGGGAG GGAAGGGGCGAGGGGATTGTATTTTAACTATTCACATGGGAGTAGAAGTG AAGATAACAACAGCAGCGGCAGCAGTAGCAGCAGCAGTAGTAGTAGCAGC AGCAGCAGCAGCCGCTCCCGTTGCCTTCTTTGCTACTCGATGAAAGTCCG T back to topprotein sequence of jgi.p|Nanoce1779_2|150333 >mRNA_1066-protein ID=mRNA_1066-protein|Name=jgi.p|Nanoce1779_2|150333|organism=Nannochloropsis oceanica|type=polypeptide|length=946bp MSSRPPTTPSRGNSAPLMCSPFTPRARQTALDRLPHHLGSLSFDTEDGDD EDVEEMMSMTPLESQQQQPHLTLNKTRTVLPLPAASPTTQQALSPRAWSP SFRPSTPVGKGFHLNPQDLTFGDRLAEGAYGVVWLARMRRPRRASVGEKE EEVAVKVQRVPWNEQEQANLLIELSILHGLVHPRLVRYYGAALLSEEEAM GKEEWRPLLHGPKNPFCEAREEGWIVGMEKEEEKGKGADEEEEEEAEEEE EEGEDTILKDKVGIHTLSRLQSPTNNSPVPFLVLIAMELCLHGSLRDALH PSLRPARPPTLPLTWLHKVRIASDIAEGLTFLHAHHLLHRDLKTTNILLS SLPSSSSSPRAQICDHAFVSSSLSPDISLFTCGTFEFQAPELLLNEPGVV IGDKVDVFSLGVILCEMITGTIPGGAAVGAEEGRDGCEEEGDINTRITLH DLAEGGRERGVGGIFMERRAEELFAVRGEEVEERVLEGCPPSLLMLALQC VGQEWEDRPTAREAWEWAEALWKEMKEEEEGGRERGVPVVEDERSPSEGG EEEGRGEGGEWEEMDLEATGERDERVDRVREVGGSGSNIDRNQRRAERKR KKKRRQQQRRQRLLQQQQQQQQQQQQQQQQQLQQESRGEGEDEKQQQRQL KDDASQKQPASTGAGRGGGVGGGGEGGVGGGGGGGGEGGEEEQEEEERHQ GVTITAPAAAADGFTGKRKEEKGGEGRGGEGGGGGGEGGGGGGRGGGGKR RGARQRNRKQDRDESDLNHSSSIPGIPPLPPPSTSPSPSSSPPPSLPSPS SPPAPSVEQPITQGSVLDCKMHSKPTSSSRSSSSSFPSSIKLEDPPINHP PPPSEEEREGRQGGKEGEDYSPLLSCCLQSWEEQLMVVQKKMEGGIDALR EEADEGLREDASGRLRRVQGMMREEVLPLVVAMQQGMAAMRARVG* back to topmRNA from alignment at scaffold_2:1138268..1141368+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1066 ID=mRNA_1066|Name=jgi.p|Nanoce1779_2|150333|organism=Nannochloropsis oceanica|type=mRNA|length=3101bp|location=Sequence derived from alignment at scaffold_2:1138268..1141368+ (Nannochloropsis oceanica) ACAGGATCTCATCGAGTTATTCTTAAGTTGATATTCATGAGCATCCGGGC
TTGACTTCACTTTTCAAAAGACAGCAACATCACGCAATCATCATGTCCTC
CCGGCCGCCCACAACGCCTTCCCGTGGAAACAGCGCCCCCCTCATGTGCA
GTCCTTTTACGCCCAGGGCACGGCAGACAGCTTTGGACCGATTGCCGCAC
CATTTGGGCTCCCTGAGCTTTGACACGGAGGATGGAGATGACGAGGATGT
GGAGGAGATGATGTCCATGACCCCTTTGGAGTCGCAGCAGCAGCAGCCCC
ACCTAACACTCAACAAAACACGCACTGTGTTGCCATTACCCGCAGCGTCG
CCCACCACACAGCAGGCTCTGTCCCCGCGTGCATGGTCTCCGTCGTTCCG
CCCGTCGACCCCGGTGGGGAAGGGGTTTCACCTGAACCCGCAAGACCTGA
CGTTCGGGGATCGCTTGGCTGAAGGTGCTTATGGCGTGGTTTGGCTCGCT
CGAATGCGTCGACCTCGTCGTGCTTCAGTAGGAGAGAAGGAGGAAGAGGT
GGCTGTGAAAGTGCAAAGAGTTCCATGGAATGAACAAGAGCAGGCGAACC
TTTTGATTGAATTGTCGATTCTGCATGGGTTGGTGCATCCGCGGCTGGTC
CGTTACTATGGTGCAGCCTTGCTGTCGGAAGAGGAGGCGATGGGGAAGGA
AGAATGGAGGCCATTGTTACACGGGCCTAAGAATCCGTTCTGTGAGGCGA
GGGAGGAAGGATGGATTGTGGGGATGGAGAAGGAGGAGGAGAAAGGGAAG
GGGGCGGACGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGGAGGAGGG
AGAAGACACGATTCTCAAGGATAAGGTGGGCATTCACACCCTTTCCCGAC
TCCAATCTCCCACTAACAACTCCCCCGTCCCCTTTCTCGTCCTCATCGCC
ATGGAGCTGTGTCTCCACGGCTCCCTTCGCGATGCTCTCCACCCCTCCCT
CCGCCCCGCCCGCCCCCCCACCCTCCCTCTCACCTGGCTCCACAAAGTTC
GGATCGCCAGCGACATTGCCGAAGGTCTCACGTTTCTCCATGCCCATCAC
CTGCTTCATCGCGACCTGAAAACCACCAACATCCTCCTCTCCTCCCTCCC
TTCCTCCTCCTCCTCCCCCCGCGCCCAAATATGCGACCACGCATTCGTGT
CCTCCTCCCTCTCGCCTGATATTTCCCTCTTTACCTGTGGGACCTTCGAA
TTTCAAGCGCCCGAACTACTGCTGAACGAGCCTGGGGTGGTGATAGGCGA
CAAGGTTGATGTCTTCAGCCTGGGAGTGATCCTGTGTGAAATGATCACGG
GTACTATACCCGGAGGTGCTGCCGTGGGAGCGGAGGAGGGACGGGATGGA
TGTGAGGAAGAGGGTGACATCAATACGAGGATAACCCTCCATGATTTGGC
CGAGGGCGGGAGGGAGCGCGGGGTGGGGGGAATCTTCATGGAGCGCAGAG
CCGAGGAGTTGTTCGCAGTCCGGGGGGAGGAGGTGGAGGAGAGAGTGTTG
GAAGGTTGCCCCCCGTCGTTGTTGATGCTGGCGTTGCAGTGTGTGGGGCA
GGAATGGGAGGACAGACCGACGGCCAGGGAGGCTTGGGAGTGGGCCGAGG
CGCTGTGGAAGGAGATGAAGGAGGAGGAGGAGGGAGGGAGGGAGAGAGGG
GTGCCGGTGGTGGAGGACGAGAGGTCGCCGTCGGAGGGAGGGGAGGAGGA
AGGGAGGGGGGAAGGAGGAGAATGGGAAGAGATGGACTTAGAAGCTACAG
GGGAGAGAGATGAAAGAGTGGATAGAGTGAGGGAGGTTGGCGGAAGCGGC
AGCAACATCGACCGCAATCAGAGGCGTGCTGAGAGGAAGCGGAAGAAGAA
ACGACGACAACAGCAACGACGACAGCGGCTGCTTCAGCAGCAGCAGCAGC
AGCAGCAGCAACAACAACAACAACAGCAGCAACAACTCCAACAAGAGAGT
AGAGGTGAAGGTGAAGATGAAAAGCAGCAGCAGCGTCAGTTGAAGGATGA
TGCTTCCCAGAAACAGCCGGCGTCAACAGGAGCAGGACGGGGTGGTGGTG
TTGGTGGTGGTGGTGAAGGAGGAGTAGGAGGAGGAGGAGGAGGAGGAGGA
GAAGGAGGAGAAGAAGAACAAGAAGAAGAAGAGAGGCACCAAGGAGTAAC
CATCACAGCGCCGGCTGCAGCTGCAGATGGATTCACAGGAAAAAGAAAAG
AGGAGAAAGGGGGAGAAGGAAGAGGAGGAGAAGGAGGAGGAGGAGGAGGA
GAAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGAAGCGTCGCGGGGC
TCGACAGCGGAACAGAAAACAGGACCGTGACGAGAGCGACTTAAACCATT
CATCCTCTATTCCTGGCATTCCTCCTCTTCCTCCCCCCTCGACCTCCCCC
TCCCCCTCCTCCTCCCCCCCCCCTTCCCTCCCATCCCCTTCTTCCCCCCC
TGCCCCCTCCGTGGAGCAACCCATCACCCAAGGGAGTGTGTTAGACTGCA
AGATGCACTCGAAGCCTACCTCCTCATCCCGCTCCTCCTCCTCCTCTTTC
CCTTCTTCCATCAAATTGGAAGATCCTCCCATCAACCATCCTCCACCTCC
ATCTGAAGAGGAGAGGGAAGGGCGACAGGGGGGGAAAGAGGGGGAGGACT
ACAGCCCCCTTCTCTCTTGTTGTCTTCAGTCCTGGGAGGAGCAATTGATG
GTGGTCCAAAAGAAGATGGAGGGCGGGATAGATGCACTGAGGGAGGAAGC
GGATGAGGGACTGAGGGAGGATGCCAGTGGGAGGTTGAGGAGGGTGCAAG
GGATGATGAGGGAGGAAGTGTTGCCGTTGGTGGTGGCCATGCAGCAGGGG
ATGGCGGCGATGCGTGCGAGGGTGGGGTAGAAGGAGGAGGAGGGAGGGAG
GGAAGGGGCGAGGGGATTGTATTTTAACTATTCACATGGGAGTAGAAGTG
AAGATAACAACAGCAGCGGCAGCAGTAGCAGCAGCAGTAGTAGTAGCAGC
AGCAGCAGCAGCCGCTCCCGTTGCCTTCTTTGCTACTCGATGAAAGTCCG
T back to topCoding sequence (CDS) from alignment at scaffold_2:1138268..1141368+ >mRNA_1066 ID=mRNA_1066|Name=jgi.p|Nanoce1779_2|150333|organism=Nannochloropsis oceanica|type=CDS|length=2838bp|location=Sequence derived from alignment at scaffold_2:1138268..1141368+ (Nannochloropsis oceanica) ATGTCCTCCCGGCCGCCCACAACGCCTTCCCGTGGAAACAGCGCCCCCCT CATGTGCAGTCCTTTTACGCCCAGGGCACGGCAGACAGCTTTGGACCGAT TGCCGCACCATTTGGGCTCCCTGAGCTTTGACACGGAGGATGGAGATGAC GAGGATGTGGAGGAGATGATGTCCATGACCCCTTTGGAGTCGCAGCAGCA GCAGCCCCACCTAACACTCAACAAAACACGCACTGTGTTGCCATTACCCG CAGCGTCGCCCACCACACAGCAGGCTCTGTCCCCGCGTGCATGGTCTCCG TCGTTCCGCCCGTCGACCCCGGTGGGGAAGGGGTTTCACCTGAACCCGCA AGACCTGACGTTCGGGGATCGCTTGGCTGAAGGTGCTTATGGCGTGGTTT GGCTCGCTCGAATGCGTCGACCTCGTCGTGCTTCAGTAGGAGAGAAGGAG GAAGAGGTGGCTGTGAAAGTGCAAAGAGTTCCATGGAATGAACAAGAGCA GGCGAACCTTTTGATTGAATTGTCGATTCTGCATGGGTTGGTGCATCCGC GGCTGGTCCGTTACTATGGTGCAGCCTTGCTGTCGGAAGAGGAGGCGATG GGGAAGGAAGAATGGAGGCCATTGTTACACGGGCCTAAGAATCCGTTCTG TGAGGCGAGGGAGGAAGGATGGATTGTGGGGATGGAGAAGGAGGAGGAGA AAGGGAAGGGGGCGGACGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAG GAGGAGGGAGAAGACACGATTCTCAAGGATAAGGTGGGCATTCACACCCT TTCCCGACTCCAATCTCCCACTAACAACTCCCCCGTCCCCTTTCTCGTCC TCATCGCCATGGAGCTGTGTCTCCACGGCTCCCTTCGCGATGCTCTCCAC CCCTCCCTCCGCCCCGCCCGCCCCCCCACCCTCCCTCTCACCTGGCTCCA CAAAGTTCGGATCGCCAGCGACATTGCCGAAGGTCTCACGTTTCTCCATG CCCATCACCTGCTTCATCGCGACCTGAAAACCACCAACATCCTCCTCTCC TCCCTCCCTTCCTCCTCCTCCTCCCCCCGCGCCCAAATATGCGACCACGC ATTCGTGTCCTCCTCCCTCTCGCCTGATATTTCCCTCTTTACCTGTGGGA CCTTCGAATTTCAAGCGCCCGAACTACTGCTGAACGAGCCTGGGGTGGTG ATAGGCGACAAGGTTGATGTCTTCAGCCTGGGAGTGATCCTGTGTGAAAT GATCACGGGTACTATACCCGGAGGTGCTGCCGTGGGAGCGGAGGAGGGAC GGGATGGATGTGAGGAAGAGGGTGACATCAATACGAGGATAACCCTCCAT GATTTGGCCGAGGGCGGGAGGGAGCGCGGGGTGGGGGGAATCTTCATGGA GCGCAGAGCCGAGGAGTTGTTCGCAGTCCGGGGGGAGGAGGTGGAGGAGA GAGTGTTGGAAGGTTGCCCCCCGTCGTTGTTGATGCTGGCGTTGCAGTGT GTGGGGCAGGAATGGGAGGACAGACCGACGGCCAGGGAGGCTTGGGAGTG GGCCGAGGCGCTGTGGAAGGAGATGAAGGAGGAGGAGGAGGGAGGGAGGG AGAGAGGGGTGCCGGTGGTGGAGGACGAGAGGTCGCCGTCGGAGGGAGGG GAGGAGGAAGGGAGGGGGGAAGGAGGAGAATGGGAAGAGATGGACTTAGA AGCTACAGGGGAGAGAGATGAAAGAGTGGATAGAGTGAGGGAGGTTGGCG GAAGCGGCAGCAACATCGACCGCAATCAGAGGCGTGCTGAGAGGAAGCGG AAGAAGAAACGACGACAACAGCAACGACGACAGCGGCTGCTTCAGCAGCA GCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAGCAACAACTCCAAC AAGAGAGTAGAGGTGAAGGTGAAGATGAAAAGCAGCAGCAGCGTCAGTTG AAGGATGATGCTTCCCAGAAACAGCCGGCGTCAACAGGAGCAGGACGGGG TGGTGGTGTTGGTGGTGGTGGTGAAGGAGGAGTAGGAGGAGGAGGAGGAG GAGGAGGAGAAGGAGGAGAAGAAGAACAAGAAGAAGAAGAGAGGCACCAA GGAGTAACCATCACAGCGCCGGCTGCAGCTGCAGATGGATTCACAGGAAA AAGAAAAGAGGAGAAAGGGGGAGAAGGAAGAGGAGGAGAAGGAGGAGGAG GAGGAGGAGAAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGAAGCGT CGCGGGGCTCGACAGCGGAACAGAAAACAGGACCGTGACGAGAGCGACTT AAACCATTCATCCTCTATTCCTGGCATTCCTCCTCTTCCTCCCCCCTCGA CCTCCCCCTCCCCCTCCTCCTCCCCCCCCCCTTCCCTCCCATCCCCTTCT TCCCCCCCTGCCCCCTCCGTGGAGCAACCCATCACCCAAGGGAGTGTGTT AGACTGCAAGATGCACTCGAAGCCTACCTCCTCATCCCGCTCCTCCTCCT CCTCTTTCCCTTCTTCCATCAAATTGGAAGATCCTCCCATCAACCATCCT CCACCTCCATCTGAAGAGGAGAGGGAAGGGCGACAGGGGGGGAAAGAGGG GGAGGACTACAGCCCCCTTCTCTCTTGTTGTCTTCAGTCCTGGGAGGAGC AATTGATGGTGGTCCAAAAGAAGATGGAGGGCGGGATAGATGCACTGAGG GAGGAAGCGGATGAGGGACTGAGGGAGGATGCCAGTGGGAGGTTGAGGAG GGTGCAAGGGATGATGAGGGAGGAAGTGTTGCCGTTGGTGGTGGCCATGC AGCAGGGGATGGCGGCGATGCGTGCGAGGGTGGGGTAG back to top
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