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Properties
| Property Name | Value |
|---|
| TranscriptId | 612132 |
| Track | FilteredModels2 |
| ProteinId | 612046 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_61 | supercontig | scaffold_61:43926..45408 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10653 ID=mRNA_10653|Name=jgi.p|Nanoce1779_2|612046|organism=Nannochloropsis oceanica|type=mRNA|length=1483bp
GCAGCAGCAGCAGCAGCAGCAGCGACATCGCAAGGCAACTTTTCGAGGTG
AAACAGCAGGAAAAAGGAAAGAAGAAGCCACGCAAGGAGGTGTAGGGAGG
GGGAATGACAGAAAGAAGAGAAGGGGAATAGAGGGTGTAGCTAAAGGTGG
AAGGATCGCCACGTGCGTTGAGGACGAATTGGTCTTCCTGCCATTGGCAG
ATGAGGGCCGAAGGGGGAATTGGAAAAAGGAAGAAAAGGGGAAGGGGAAG
GAGGGCAGGACGGGGCCTTATAGTAATGATGGGAGCATCCTAGGCTCGGG
TGTACACGGGGAGGCTCAAAGCTGGGCGAGCAAGGCCGAAGAAGACGGAG
GAAACGGGGCTGGAGAGAGGAAAGGTGGGCAGATGAAGGGGGCCGGCAGC
AGCTGTAGCAAAGCGTCGCCCTCGAGGACAGCCAAGATCACGACCAGCAG
CAGCAGCAGCAGCAGCAGCACGACCACCACCGCCAGCACCAGTTGTTCGA
ATAGGATAAAGAGGCCTTTGACGATGGCCAAGGGAGGCTGCAAGAGGAAG
AAAATCAGCTGGTCTCCTGGTTCACTTCTCGACCGAAACACCTGCCTTCT
CCCTTCCACTGTGACGCCGTATGTCACCCCCCTCCTTCTTCGCAACCCCG
ACGACCTTCTCCTCTTCGAAACTGCCAAGAGAGCCAGAAGGGCGGCAGCA
GATGCGAAGGCGAAGACAGCTGCAAAAGTGAGGGCTGCTGCTGTAGCGGC
TGCGACAAATGTTAGGGCAGTTGCTGCTGCAGCAGAACTAGTCGTGCACG
CGTTGCCTGGTGGAGAAGAGGGAAAGGGGGAGAAAGGAAAACAGAAAGCG
ATGCCGCTGAGCGTACCCGAAATAATTATGCCCCCGCCTTTGATCGTAAA
TGGGGAAGGACGCTTCCGGCAATCACAACAGCAGCCACTGCAGCAGCACA
TGCTACTGCATCATATAGCCGTTATCTCAGGTGATGGGGAGAAAGACGAA
GGAGAAGGAAGAGGAGGAGCAGGAGGAGCAAGAGAAGAGGAGCAAGGAGA
GGAAATTTTGGAGCGGAATATCATGGTGTCTCAGCACCAGGAAGAGAGAT
CTCAAAAGCATCAAGTCGGGTTTCCAGGGATGGGGGATATGAAGGATATG
CAAATAGATTTCCCTAGGCTGGCAGGGGAGATAGAGCACCAGTCGAGATG
TCAAAGGGGAGAAGGAGTTTTGGCAACGAGTGATTGTAGAGATATAACCT
GTGTTGTTGCTGTCTGAGAAAAGGGAAGAGTTTGGCAAGAAGGGTGTGAA
ATATATCGAATGAAATAAAAATGAACACACAAAAAGCGCGTTTATTTTTA
GGTATGCGAAATGGCATGAGAAAGCACAGAGAATGCGACAAAGAGAAAAA
AGACACTCCCGTAATCCAGGATATAAAGCATATTTGCGGCACGTGGGAGG
GTACTTGTCCGTGTACGGCCGCAACCCACGACT back to topprotein sequence of jgi.p|Nanoce1779_2|612046 >mRNA_10653-protein ID=mRNA_10653-protein|Name=jgi.p|Nanoce1779_2|612046|organism=Nannochloropsis oceanica|type=polypeptide|length=295bp
MKGAGSSCSKASPSRTAKITTSSSSSSSSTTTTASTSCSNRIKRPLTMAK
GGCKRKKISWSPGSLLDRNTCLLPSTVTPYVTPLLLRNPDDLLLFETAKR
ARRAAADAKAKTAAKVRAAAVAAATNVRAVAAAAELVVHALPGGEEGKGE
KGKQKAMPLSVPEIIMPPPLIVNGEGRFRQSQQQPLQQHMLLHHIAVISG
DGEKDEGEGRGGAGGAREEEQGEEILERNIMVSQHQEERSQKHQVGFPGM
GDMKDMQIDFPRLAGEIEHQSRCQRGEGVLATSDCRDITCVVAV* back to topmRNA from alignment at scaffold_61:43926..45408- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10653 ID=mRNA_10653|Name=jgi.p|Nanoce1779_2|612046|organism=Nannochloropsis oceanica|type=mRNA|length=1483bp|location=Sequence derived from alignment at scaffold_61:43926..45408- (Nannochloropsis oceanica)
GCAGCAGCAGCAGCAGCAGCAGCGACATCGCAAGGCAACTTTTCGAGGTG
AAACAGCAGGAAAAAGGAAAGAAGAAGCCACGCAAGGAGGTGTAGGGAGG
GGGAATGACAGAAAGAAGAGAAGGGGAATAGAGGGTGTAGCTAAAGGTGG
AAGGATCGCCACGTGCGTTGAGGACGAATTGGTCTTCCTGCCATTGGCAG
ATGAGGGCCGAAGGGGGAATTGGAAAAAGGAAGAAAAGGGGAAGGGGAAG
GAGGGCAGGACGGGGCCTTATAGTAATGATGGGAGCATCCTAGGCTCGGG
TGTACACGGGGAGGCTCAAAGCTGGGCGAGCAAGGCCGAAGAAGACGGAG
GAAACGGGGCTGGAGAGAGGAAAGGTGGGCAGATGAAGGGGGCCGGCAGC
AGCTGTAGCAAAGCGTCGCCCTCGAGGACAGCCAAGATCACGACCAGCAG
CAGCAGCAGCAGCAGCAGCACGACCACCACCGCCAGCACCAGTTGTTCGA
ATAGGATAAAGAGGCCTTTGACGATGGCCAAGGGAGGCTGCAAGAGGAAG
AAAATCAGCTGGTCTCCTGGTTCACTTCTCGACCGAAACACCTGCCTTCT
CCCTTCCACTGTGACGCCGTATGTCACCCCCCTCCTTCTTCGCAACCCCG
ACGACCTTCTCCTCTTCGAAACTGCCAAGAGAGCCAGAAGGGCGGCAGCA
GATGCGAAGGCGAAGACAGCTGCAAAAGTGAGGGCTGCTGCTGTAGCGGC
TGCGACAAATGTTAGGGCAGTTGCTGCTGCAGCAGAACTAGTCGTGCACG
CGTTGCCTGGTGGAGAAGAGGGAAAGGGGGAGAAAGGAAAACAGAAAGCG
ATGCCGCTGAGCGTACCCGAAATAATTATGCCCCCGCCTTTGATCGTAAA
TGGGGAAGGACGCTTCCGGCAATCACAACAGCAGCCACTGCAGCAGCACA
TGCTACTGCATCATATAGCCGTTATCTCAGGTGATGGGGAGAAAGACGAA
GGAGAAGGAAGAGGAGGAGCAGGAGGAGCAAGAGAAGAGGAGCAAGGAGA
GGAAATTTTGGAGCGGAATATCATGGTGTCTCAGCACCAGGAAGAGAGAT
CTCAAAAGCATCAAGTCGGGTTTCCAGGGATGGGGGATATGAAGGATATG
CAAATAGATTTCCCTAGGCTGGCAGGGGAGATAGAGCACCAGTCGAGATG
TCAAAGGGGAGAAGGAGTTTTGGCAACGAGTGATTGTAGAGATATAACCT
GTGTTGTTGCTGTCTGAGAAAAGGGAAGAGTTTGGCAAGAAGGGTGTGAA
ATATATCGAATGAAATAAAAATGAACACACAAAAAGCGCGTTTATTTTTA
GGTATGCGAAATGGCATGAGAAAGCACAGAGAATGCGACAAAGAGAAAAA
AGACACTCCCGTAATCCAGGATATAAAGCATATTTGCGGCACGTGGGAGG
GTACTTGTCCGTGTACGGCCGCAACCCACGACT back to topCoding sequence (CDS) from alignment at scaffold_61:43926..45408- >mRNA_10653 ID=mRNA_10653|Name=jgi.p|Nanoce1779_2|612046|organism=Nannochloropsis oceanica|type=CDS|length=885bp|location=Sequence derived from alignment at scaffold_61:43926..45408- (Nannochloropsis oceanica)
ATGAAGGGGGCCGGCAGCAGCTGTAGCAAAGCGTCGCCCTCGAGGACAGC
CAAGATCACGACCAGCAGCAGCAGCAGCAGCAGCAGCACGACCACCACCG
CCAGCACCAGTTGTTCGAATAGGATAAAGAGGCCTTTGACGATGGCCAAG
GGAGGCTGCAAGAGGAAGAAAATCAGCTGGTCTCCTGGTTCACTTCTCGA
CCGAAACACCTGCCTTCTCCCTTCCACTGTGACGCCGTATGTCACCCCCC
TCCTTCTTCGCAACCCCGACGACCTTCTCCTCTTCGAAACTGCCAAGAGA
GCCAGAAGGGCGGCAGCAGATGCGAAGGCGAAGACAGCTGCAAAAGTGAG
GGCTGCTGCTGTAGCGGCTGCGACAAATGTTAGGGCAGTTGCTGCTGCAG
CAGAACTAGTCGTGCACGCGTTGCCTGGTGGAGAAGAGGGAAAGGGGGAG
AAAGGAAAACAGAAAGCGATGCCGCTGAGCGTACCCGAAATAATTATGCC
CCCGCCTTTGATCGTAAATGGGGAAGGACGCTTCCGGCAATCACAACAGC
AGCCACTGCAGCAGCACATGCTACTGCATCATATAGCCGTTATCTCAGGT
GATGGGGAGAAAGACGAAGGAGAAGGAAGAGGAGGAGCAGGAGGAGCAAG
AGAAGAGGAGCAAGGAGAGGAAATTTTGGAGCGGAATATCATGGTGTCTC
AGCACCAGGAAGAGAGATCTCAAAAGCATCAAGTCGGGTTTCCAGGGATG
GGGGATATGAAGGATATGCAAATAGATTTCCCTAGGCTGGCAGGGGAGAT
AGAGCACCAGTCGAGATGTCAAAGGGGAGAAGGAGTTTTGGCAACGAGTG
ATTGTAGAGATATAACCTGTGTTGTTGCTGTCTGA back to top
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