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Properties
| Property Name | Value |
|---|
| TranscriptId | 612126 |
| Track | FilteredModels2 |
| ProteinId | 612040 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_61 | supercontig | scaffold_61:42241..43378 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10652 ID=mRNA_10652|Name=jgi.p|Nanoce1779_2|612040|organism=Nannochloropsis oceanica|type=mRNA|length=687bp
GGGCGGGGTGGGGGACGAGATGGTGGTGGACGGGGACGACGTGGAGGAAG
ATGTGGTACCGACCGTCTTTCGATGGGAGCATGGCGGGCGACAGGTGTAC
ATTCAAGGGACGTTTAATAACTGGGAGCGGCAGATTCCCATGCACCGGAG
CGGGAATGACTTCACCTATATCCATAACCTGAAGCGCGGCAAGCACGCCT
TCAAGTTCATAGTAGACGACGAGTGGCGCTTCGCCCCGGATCAACTGACA
GTGGCGGATGTGGAAGGCCGCATCAACAATTTTATCGACGTGACACACTT
CAAGCCCTTCAACGAGGACTCTTCTACTCTGGACATTGCACGCAAGGAGG
AGGATCTCTACGACACCCACTACCCCGACGTGGAGGAGTACAGCGTCAAG
GAGCCTCCGCCCCTCCCGCCCCACCTTCGCCACATCATTTTGAACAAGGT
GCCGAATGAGATGAACCCGCTGTCACTGCCCGTGCCTCAGCACGTGGCGG
TGGACCACCTGTACTGCACAGCCATCAAGGACGGGATGATGGTTCTAGGC
GTCACACAGCGCTTCCGCATGAAGTTCGTCACCACTGTGTATTACTCCAT
GATGCCTTAAGGGAACTGGCGGGAAACGGGAGGAGGAGTTTGTATAGAAA
AAGAAATGGTGAGAAGTAAAGAAAACCACGTTTTCTC back to topprotein sequence of jgi.p|Nanoce1779_2|612040 >mRNA_10652-protein ID=mRNA_10652-protein|Name=jgi.p|Nanoce1779_2|612040|organism=Nannochloropsis oceanica|type=polypeptide|length=197bp
MVVDGDDVEEDVVPTVFRWEHGGRQVYIQGTFNNWERQIPMHRSGNDFTY
IHNLKRGKHAFKFIVDDEWRFAPDQLTVADVEGRINNFIDVTHFKPFNED
SSTLDIARKEEDLYDTHYPDVEEYSVKEPPPLPPHLRHIILNKVPNEMNP
LSLPVPQHVAVDHLYCTAIKDGMMVLGVTQRFRMKFVTTVYYSMMP* back to topmRNA from alignment at scaffold_61:42241..43378- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10652 ID=mRNA_10652|Name=jgi.p|Nanoce1779_2|612040|organism=Nannochloropsis oceanica|type=mRNA|length=1138bp|location=Sequence derived from alignment at scaffold_61:42241..43378- (Nannochloropsis oceanica)
GGGCGGGGTGGGGGACGAGATGGTGGTGGACGGGGACGACGTGGAGGAAG
ATGTGGTACCGACCGTCTTTCGATGGGAGCATGGCGGGCGACAGGTACGG
CGAACAGGGAGGAAAGAGGTGTAGAAGGGATGAGAGGCGTGTGGGTTTGG
TTTTGTCTGAGAGCAGGCCGCTGGATAGCGATGTTCGAGTGGCCTCTCCG
CTTCACGTCACGCTCTTTTACTCATTGCTGCTTCACTCCCCCTCTCTCCC
TCTGTTCTTTCCCTAGGTGTACATTCAAGGGACGTTTAATAACTGGGAGC
GGCAGATTCCCATGCACCGGAGCGGGAATGACTTCACCTATATCCATAAC
CTGAAGCGCGGCAAGCACGTACGTCCAGGGGGGCTAAGAAAGGGGGGCTG
GGGTGAGGAGGGTATAAAGGAGCAGCAGGGTTAGTGTGCTTTTCTATCCT
GTGCCGTCCATATCACTCACTCTCAGTCTTTCCCTACCTACCTCCCACAC
TCCTCTTTTCCCAGGCCTTCAAGTTCATAGTAGACGACGAGTGGCGCTTC
GCCCCGGATCAACTGACAGTGGCGGATGTGGAAGGCCGCATCAACAATTT
TATCGACGTGACACACTTCAAGCCCTTCAACGAGGACTCTTCTACTCTGG
ACATTGCACGCAAGGAGGAGGATCTCTACGACACCCACTACCCCGACGTG
GAGGAGTACAGCGTCAAGGAGCCTCCGCCCCTCCCGCCCCACCTTCGCCA
CATCATTTTGAACAAGGTAAGTAGTAGAGGGGACGGATGGTAGGAGGAAA
TAGAGTGCTTTATCATTTTGTAGGGAGGTTGAATGAGTGAGCAGCCCTGT
ATAAAGACAAAAGGTGCTGAAGAGAACACTTGACCCTCCCCCCTTCCAGG
TGCCGAATGAGATGAACCCGCTGTCACTGCCCGTGCCTCAGCACGTGGCG
GTGGACCACCTGTACTGCACAGCCATCAAGGACGGGATGATGGTTCTAGG
CGTCACACAGCGCTTCCGCATGAAGTTCGTCACCACTGTGTATTACTCCA
TGATGCCTTAAGGGAACTGGCGGGAAACGGGAGGAGGAGTTTGTATAGAA
AAAGAAATGGTGAGAAGTAAAGAAAACCACGTTTTCTC back to topCoding sequence (CDS) from alignment at scaffold_61:42241..43378- >mRNA_10652 ID=mRNA_10652|Name=jgi.p|Nanoce1779_2|612040|organism=Nannochloropsis oceanica|type=CDS|length=2364bp|location=Sequence derived from alignment at scaffold_61:42241..43378- (Nannochloropsis oceanica)
GTGCCGAATGAGATGAACCCGCTGTCACTGCCCGTGCCTCAGCACGTGGC
GGTGGACCACCTGTACTGCACAGCCATCAAGGACGGGATGATGGTTCTAG
GCGTCACACAGCGCTTCCGCATGAAGTTCGTCACCACTGTGTATTACTCC
ATGATGCCTTAAGCCTTCAAGTTCATAGTAGACGACGAGTGGCGCTTCGC
CCCGGATCAACTGACAGTGGCGGATGTGGAAGGCCGCATCAACAATTTTA
TCGACGTGACACACTTCAAGCCCTTCAACGAGGACTCTTCTACTCTGGAC
ATTGCACGCAAGGAGGAGGATCTCTACGACACCCACTACCCCGACGTGGA
GGAGTACAGCGTCAAGGAGCCTCCGCCCCTCCCGCCCCACCTTCGCCACA
TCATTTTGAACAAGGTGTACATTCAAGGGACGTTTAATAACTGGGAGCGG
CAGATTCCCATGCACCGGAGCGGGAATGACTTCACCTATATCCATAACCT
GAAGCGCGGCAAGCACATGGTGGTGGACGGGGACGACGTGGAGGAAGATG
TGGTACCGACCGTCTTTCGATGGGAGCATGGCGGGCGACAGGTGCCGAAT
GAGATGAACCCGCTGTCACTGCCCGTGCCTCAGCACGTGGCGGTGGACCA
CCTGTACTGCACAGCCATCAAGGACGGGATGATGGTTCTAGGCGTCACAC
AGCGCTTCCGCATGAAGTTCGTCACCACTGTGTATTACTCCATGATGCCT
TAAGCCTTCAAGTTCATAGTAGACGACGAGTGGCGCTTCGCCCCGGATCA
ACTGACAGTGGCGGATGTGGAAGGCCGCATCAACAATTTTATCGACGTGA
CACACTTCAAGCCCTTCAACGAGGACTCTTCTACTCTGGACATTGCACGC
AAGGAGGAGGATCTCTACGACACCCACTACCCCGACGTGGAGGAGTACAG
CGTCAAGGAGCCTCCGCCCCTCCCGCCCCACCTTCGCCACATCATTTTGA
ACAAGGTGTACATTCAAGGGACGTTTAATAACTGGGAGCGGCAGATTCCC
ATGCACCGGAGCGGGAATGACTTCACCTATATCCATAACCTGAAGCGCGG
CAAGCACATGGTGGTGGACGGGGACGACGTGGAGGAAGATGTGGTACCGA
CCGTCTTTCGATGGGAGCATGGCGGGCGACAGGTGCCGAATGAGATGAAC
CCGCTGTCACTGCCCGTGCCTCAGCACGTGGCGGTGGACCACCTGTACTG
CACAGCCATCAAGGACGGGATGATGGTTCTAGGCGTCACACAGCGCTTCC
GCATGAAGTTCGTCACCACTGTGTATTACTCCATGATGCCTTAAGCCTTC
AAGTTCATAGTAGACGACGAGTGGCGCTTCGCCCCGGATCAACTGACAGT
GGCGGATGTGGAAGGCCGCATCAACAATTTTATCGACGTGACACACTTCA
AGCCCTTCAACGAGGACTCTTCTACTCTGGACATTGCACGCAAGGAGGAG
GATCTCTACGACACCCACTACCCCGACGTGGAGGAGTACAGCGTCAAGGA
GCCTCCGCCCCTCCCGCCCCACCTTCGCCACATCATTTTGAACAAGGTGT
ACATTCAAGGGACGTTTAATAACTGGGAGCGGCAGATTCCCATGCACCGG
AGCGGGAATGACTTCACCTATATCCATAACCTGAAGCGCGGCAAGCACAT
GGTGGTGGACGGGGACGACGTGGAGGAAGATGTGGTACCGACCGTCTTTC
GATGGGAGCATGGCGGGCGACAGGTGCCGAATGAGATGAACCCGCTGTCA
CTGCCCGTGCCTCAGCACGTGGCGGTGGACCACCTGTACTGCACAGCCAT
CAAGGACGGGATGATGGTTCTAGGCGTCACACAGCGCTTCCGCATGAAGT
TCGTCACCACTGTGTATTACTCCATGATGCCTTAAGCCTTCAAGTTCATA
GTAGACGACGAGTGGCGCTTCGCCCCGGATCAACTGACAGTGGCGGATGT
GGAAGGCCGCATCAACAATTTTATCGACGTGACACACTTCAAGCCCTTCA
ACGAGGACTCTTCTACTCTGGACATTGCACGCAAGGAGGAGGATCTCTAC
GACACCCACTACCCCGACGTGGAGGAGTACAGCGTCAAGGAGCCTCCGCC
CCTCCCGCCCCACCTTCGCCACATCATTTTGAACAAGGTGTACATTCAAG
GGACGTTTAATAACTGGGAGCGGCAGATTCCCATGCACCGGAGCGGGAAT
GACTTCACCTATATCCATAACCTGAAGCGCGGCAAGCACATGGTGGTGGA
CGGGGACGACGTGGAGGAAGATGTGGTACCGACCGTCTTTCGATGGGAGC
ATGGCGGGCGACAG back to top
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