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Properties
| Property Name | Value |
|---|
| TranscriptId | 643537 |
| Track | FilteredModels2 |
| ProteinId | 643451 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:79153..82696 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10634 ID=mRNA_10634|Name=jgi.p|Nanoce1779_2|643451|organism=Nannochloropsis oceanica|type=mRNA|length=1440bp
ATGCCGCGGGTGCGTGCCGTGGCCATCCGCTTGGCCAAGGAAGGGCGTAT
CGACATAACACAAAAGGGGCAAGTTGTGGTGGTGGAAACAGAGGAGGATA
TTCAAGGGCCGATTCGTTTAAGACTGCGAAAGCAGGAGGGTATGGAGATT
CGGAAGCAGGAGGGCATGGAGGAGACTGAGCTGAAGGACAGAATAGAAAA
AGGTGGCACAAACAGTTGGATTCGCGAGAGCAGGAACGCGTATCCCGATG
CTGAAGATGTGAAAAGAGTAGACCAGAGAAACATCAACAGCGCTACATCT
CCTTACTCAATCCAACGCAACAATTCCTCTGACGTCTCCACCAAGCCTCC
CGTCTTGGACGCCATCTCCTCATTCTTCGCCCTCCCCCTCGAGCAAAAGC
AAGCCCTGCCCTCGGTCCATTCCGACGGTTTCTCAAGGGGCTATATCCCC
TTGATGGGCGAGAGTGGTCTCAAAGCTCAGTATTGTGAATGGAAGGAGGG
GTTCAGCCTGGGGTACGAAGAAAAGGACGAAGAGAAAGTAAAGGACAAAG
GGAAGGAGGAAGGGGAGAGTTGTGTCGCTTCCCACAGCAGTATTGAAAAG
AGCAAGGGAGAGAAGCAGCAGCAGCCGCCACAACAGCCCCAGCGACGTTC
CTCCAACCCTTTGGAAGGGCCCAACGTGTGGCCTTCCTCTCCCACCGCCC
TCAAGGCCCTCCGAGGAGGAGGAAGAGGAGGAGGGGAGGGATGGAAGGAG
GAGTTAATGACGTTCTTTCGAGACCTGATCATTCTCAGTGAGGCTTTGAC
TCGCGCGTTGTCTTTGGCACTTTATCAAGAGGAAGAGTGGCTCGGAGCGG
TGGGCTCGAGCCCGCACACGGACTGGGGGTTGTTTACTATCATTCTGGAG
GAGGGAGGGGGGGAAGATGTGGAGGAGGGAGGGCTGCAGATCCGCCGTCG
ACGACTACAGCGGCAACAAGAGGAGGAGGGAGGGGGAGAGGGAATGGAGG
AGGAGTTTGAGTGGGTGGGAGTGCGAGCCGCGCCGGGAACGCTGATTGTG
AACTGTGGTGATTTTTTGTCGTTGGTTTCCAGGCGGGTGCTGGGCGGGAT
GGAAGGGAGAAGAGAGGGAGGGATGGGAGACAAGGAAGAGGAGGAAAGCG
GGAGGGAGGGCAGGGAGGGCAGGGCGCCATTTTTTCAATCGCCGGTGCAC
CGGGTAATTCTAGCCAAGGAGCAGCACCGGACGTCGCTTGTCTTCTTTTA
TTATCCTTCCTTTGACGCGGTCATGCAGGAGGGAGGGAGGGAGGAAAGAA
GAGTAGGAGAGCCATATAACACACTATTGCAGGTGGAGGAGGAGGATGGG
GGGGAGAAGCGAGGGAGGGAGAGGGAGAGGAGGACTGCGATTTTCGGAGA
ACACATAATGCGGAAATGGGCAGGGGTAAAGTCGTCTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|643451 >mRNA_10634-protein ID=mRNA_10634-protein|Name=jgi.p|Nanoce1779_2|643451|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp
MPRVRAVAIRLAKEGRIDITQKGQVVVVETEEDIQGPIRLRLRKQEGMEI
RKQEGMEETELKDRIEKGGTNSWIRESRNAYPDAEDVKRVDQRNINSATS
PYSIQRNNSSDVSTKPPVLDAISSFFALPLEQKQALPSVHSDGFSRGYIP
LMGESGLKAQYCEWKEGFSLGYEEKDEEKVKDKGKEEGESCVASHSSIEK
SKGEKQQQPPQQPQRRSSNPLEGPNVWPSSPTALKALRGGGRGGGEGWKE
ELMTFFRDLIILSEALTRALSLALYQEEEWLGAVGSSPHTDWGLFTIILE
EGGGEDVEEGGLQIRRRRLQRQQEEEGGGEGMEEEFEWVGVRAAPGTLIV
NCGDFLSLVSRRVLGGMEGRREGGMGDKEEEESGREGREGRAPFFQSPVH
RVILAKEQHRTSLVFFYYPSFDAVMQEGGREERRVGEPYNTLLQVEEEDG
GEKRGRERERRTAIFGEHIMRKWAGVKSS* back to topmRNA from alignment at scaffold_62:79153..82696- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10634 ID=mRNA_10634|Name=jgi.p|Nanoce1779_2|643451|organism=Nannochloropsis oceanica|type=mRNA|length=3544bp|location=Sequence derived from alignment at scaffold_62:79153..82696- (Nannochloropsis oceanica)
ATGCCGCGGGTGCGTGCCGTGGCCATCCGCTTGGCCAAGGAAGGGCGTAT
CGACATAACACAAAAGGGGCAAGTTGTGGTGGTGGAAACAGAGGAGGATA
TTCAAGGGCCGATTCGTTTAAGACTGCGAAAGCAGGAGGGTATGGAGATT
CGGAAGCAGGAGGGCATGGAGGAGACTGAGCTGAAGGACAGAATAGAAAA
AGGTGGCACAAACAGTAAGCGGGATTCACCGGCTGCGCCTATAGAGCACT
TTGTTGATAGAATAAAATGAAAATAGCATGGGCGATCAAGACCTGATCAA
AGTCAATCAGGCTGCCTTGTGTATTTACTTTGTTCACATATTCTTTACAC
ACCTTTTGGATGTCTCACCCATCTGTCATTTCATACCCTTGTCTGGAAGC
TCCACCATCCATCCGCCGACACCACAACTATAACAACTATCTAAACCAAT
CTCTATCTCCCTTCCCTTATTCCCTCGCCTTTATCTCTTTCCAAACCTTC
AAAAGACACCGATGCCTTCACATCCTCTCTCCTCTTTCTCCCATCCACTG
GGTCACACCCCCGCTCCCATACCCCGCACTTCCCTCCCCAGTTCTCTTAC
CACACTCCCTCCATCCTCCTCCTTATCGACAAGAAGGATCCCTTGCAGCA
ATTAATGATCCGCATATGTCGATGCTGCGACGAATGAATGGTCCATGTGA
AGCACAGGCGAGTTCGGCCCCGATCACGCAAAGGGCTTGCCGACCTTGGG
GGCTTGCTGCCTGCCATCCTGCCGTTCTTCTTTTTATCCTCTATAATCCT
TCTTTCTTATAGAGTACATGGGTCCGAGGTGGGGACGAAGCGGAGGAAGA
AAGCCAGGAAGGCTCTCTTGGAGAAGGAAAGAGAGGAGGAAGGCGAAGTC
ATTGCTGAGCGTGTAGCCAAGGAAGGAGGTAATGCAAAGGGCCACAAGGG
GGGTGGTTTTCTGCCATCTTTCCTAATTGCTTTAGCAGCAGCGACAATGA
CAACACTGTAACATCCAGCACACATCTCTCAGCATCAACTCCACACCTTC
TGCTTCCTCCTTCCGCTAACACTTAGAAATAGCGCCACAGTAAATAAAAA
GTGGCCACCTTTCTCACCGGTATCTACTGGGTCTCAAACACATTGATTCT
TACCCTTTGCTTTTCTTCCTTCTCCTCCTTCTCCTCCTCCTCCTCCTCCT
CCTCTTTCTCCTCCTCTTCCTGATGGCCTTTCTACAGTGACTCTTTCGTT
AACCCCCCTCCCACTCTTCCTCCTCCTCCTTTTCTGCTTTGATGATCACC
GCCACAAACTGATCATCATCCTGCTCGAATCCGTGACATTCGATCGTCAT
GCCGAAATTTACGAAGTGGTAGGCGCCATTACGTCCGTCGTTGTCGCTGA
TCGTACAGGTGCTACAACTGAGGCTTGCATACCCCTCTTCTCTGTCGTTT
CGACTCTGCTTGTCTTGACCCCTAGGATTCAGCAGGACTGCTACCGTACA
TTATAGGGGCGCTGAGTGTGGTACCTCTATCCTTTTCCCTGCGTAGAATA
GTGTGGGAGGGTGGAATTCGAATAGGAGGGGGGGTGGGGAGGTAAAGCAG
GAAGAGGTGGGAAGATGCAAGGTAAGAATGTCAGTGTTAGGTCCAAAAAT
CGTCCTATCTTCAGATGTCATCTACCTTGTTTTAAAAAGGCGCAGATATG
GAATATTTTGCCAAAGGAAAAGGCGCGTGAGGACATGGACGAAGGCCGTG
AGACTCGGACATGCCCCGCAGTCTGAGATTGAAGGCTGGGGCTGCTTTGG
TGGGGCATGAAGGTGGCAGTGGACATGATGAAAAATTCACTACAACAACC
TCATTGACTCTAATCCTCATCGACATTACTACTCTGATCCTCATTGACAC
TAATCCAAGCATAGAAACATGCATTGCTGCCGGATTGGAGCTACTGAAAT
AGTCTAAGGGTAGCATTTTACGGCGCAGACCCATCGCTCGCTCCGTCAAT
CGTATCCCTTGCATTAGCTTCTTTTCCGCACGCAGTCCTTTCTCTACACT
CTAAAAATGCCCACCACCACCACTTCTTCTTCGTGGCAACCGATTCGAAT
CGACCTCTTTCCGTTCCTCCATTCTTCATCTTCACCACTAAATACCGAGG
CAAAGCAAGCCACGGTCGTGGCGCTGCGTCATGCTTGCAAGACGGACGGT
CTCTTTCTCCTCGACTACAAAGGTTGGATTCGCGAGAGCAGGAACGCGTA
TCCCGATGCTGAAGATGTGAAAAGAGTAGACCAGAGAAACATCAACAGCG
CTACATCTCCTTACTCAATCCAACGCAACAATTCCTCTGACGTCTCCACC
AAGCCTCCCGTCTTGGACGCCATCTCCTCATTCTTCGCCCTCCCCCTCGA
GCAAAAGCAAGCCCTGCCCTCGGTCCATTCCGACGGTTTCTCAAGGGGCT
ATATCCCCTTGATGGGCGAGAGTGGTCTCAAAGCTCAGTATTGTGAATGG
AAGGAGGGGTTCAGCCTGGGGTACGAAGAAAAGGACGAAGAGAAAGTAAA
GGACAAAGGGAAGGAGGAAGGGGAGAGTTGTGTCGCTTCCCACAGCAGTA
TTGAAAAGAGCAAGGGAGAGAAGCAGCAGCAGCCGCCACAACAGCCCCAG
CGACGTTCCTCCAACCCTTTGGAAGGGCCCAACGTGTGGCCTTCCTCTCC
CACCGCCCTCAAGGCCCTCCGAGGAGGAGGAAGAGGAGGAGGGGAGGGAT
GGAAGGAGGAGTTAATGACGTTCTTTCGAGACCTGATCATTCTCAGTGAG
GCTTTGACTCGCGCGTTGTCTTTGGCACTTTATCAAGAGGAAGAGTGGCT
CGGAGGTGTGTGTGGGAAAGGCGGGGAAAGAATATCCCTCCTGCGAGCAT
TCCACTACTTCCCCTCTTCCTCCCTCCCGCCCTCCATCCCACCCTCACGA
GCGGTGGGCTCGAGCCCGCACACGGACTGGGGGTTGTTTACTATCATTCT
GGAGGAGGGAGGGGGGGAAGATGTGGAGGAGGGAGGGCTGCAGATCCGCC
GTCGACGACTACAGCGGCAACAAGAGGAGGAGGGAGGGGGAGAGGGAATG
GAGGAGGAGTTTGAGTGGGTGGGAGTGCGAGCCGCGCCGGGAACGCTGAT
TGTGAACTGTGGTGATTTTTTGTCGTTGGTTTCCAGGCGGGTGCTGGGCG
GGATGGAAGGGAGAAGAGAGGGAGGGATGGGAGACAAGGAAGAGGAGGAA
AGCGGGAGGGAGGGCAGGGAGGGCAGGGCGCCATTTTTTCAATCGCCGGT
GCACCGGGTAATTCTAGCCAAGGAGCAGCACCGGACGTCGCTTGTCTTCT
TTTATTATCCTTCCTTTGACGCGGTCATGCAGGAGGGAGGGAGGGAGGAA
AGAAGAGTAGGAGAGCCATATAACACACTATTGCAGGTGGAGGAGGAGGA
TGGGGGGGAGAAGCGAGGGAGGGAGAGGGAGAGGAGGACTGCGATTTTCG
GAGAACACATAATGCGGAAATGGGCAGGGGTAAAGTCGTCTTGA back to topCoding sequence (CDS) from alignment at scaffold_62:79153..82696- >mRNA_10634 ID=mRNA_10634|Name=jgi.p|Nanoce1779_2|643451|organism=Nannochloropsis oceanica|type=CDS|length=4320bp|location=Sequence derived from alignment at scaffold_62:79153..82696- (Nannochloropsis oceanica)
CGGTGGGCTCGAGCCCGCACACGGACTGGGGGTTGTTTACTATCATTCTG
GAGGAGGGAGGGGGGGAAGATGTGGAGGAGGGAGGGCTGCAGATCCGCCG
TCGACGACTACAGCGGCAACAAGAGGAGGAGGGAGGGGGAGAGGGAATGG
AGGAGGAGTTTGAGTGGGTGGGAGTGCGAGCCGCGCCGGGAACGCTGATT
GTGAACTGTGGTGATTTTTTGTCGTTGGTTTCCAGGCGGGTGCTGGGCGG
GATGGAAGGGAGAAGAGAGGGAGGGATGGGAGACAAGGAAGAGGAGGAAA
GCGGGAGGGAGGGCAGGGAGGGCAGGGCGCCATTTTTTCAATCGCCGGTG
CACCGGGTAATTCTAGCCAAGGAGCAGCACCGGACGTCGCTTGTCTTCTT
TTATTATCCTTCCTTTGACGCGGTCATGCAGGAGGGAGGGAGGGAGGAAA
GAAGAGTAGGAGAGCCATATAACACACTATTGCAGGTGGAGGAGGAGGAT
GGGGGGGAGAAGCGAGGGAGGGAGAGGGAGAGGAGGACTGCGATTTTCGG
AGAACACATAATGCGGAAATGGGCAGGGGTAAAGTCGTCTTGAGTTGGAT
TCGCGAGAGCAGGAACGCGTATCCCGATGCTGAAGATGTGAAAAGAGTAG
ACCAGAGAAACATCAACAGCGCTACATCTCCTTACTCAATCCAACGCAAC
AATTCCTCTGACGTCTCCACCAAGCCTCCCGTCTTGGACGCCATCTCCTC
ATTCTTCGCCCTCCCCCTCGAGCAAAAGCAAGCCCTGCCCTCGGTCCATT
CCGACGGTTTCTCAAGGGGCTATATCCCCTTGATGGGCGAGAGTGGTCTC
AAAGCTCAGTATTGTGAATGGAAGGAGGGGTTCAGCCTGGGGTACGAAGA
AAAGGACGAAGAGAAAGTAAAGGACAAAGGGAAGGAGGAAGGGGAGAGTT
GTGTCGCTTCCCACAGCAGTATTGAAAAGAGCAAGGGAGAGAAGCAGCAG
CAGCCGCCACAACAGCCCCAGCGACGTTCCTCCAACCCTTTGGAAGGGCC
CAACGTGTGGCCTTCCTCTCCCACCGCCCTCAAGGCCCTCCGAGGAGGAG
GAAGAGGAGGAGGGGAGGGATGGAAGGAGGAGTTAATGACGTTCTTTCGA
GACCTGATCATTCTCAGTGAGGCTTTGACTCGCGCGTTGTCTTTGGCACT
TTATCAAGAGGAAGAGTGGCTCGGAGATGCCGCGGGTGCGTGCCGTGGCC
ATCCGCTTGGCCAAGGAAGGGCGTATCGACATAACACAAAAGGGGCAAGT
TGTGGTGGTGGAAACAGAGGAGGATATTCAAGGGCCGATTCGTTTAAGAC
TGCGAAAGCAGGAGGGTATGGAGATTCGGAAGCAGGAGGGCATGGAGGAG
ACTGAGCTGAAGGACAGAATAGAAAAAGGTGGCACAAACACGGTGGGCTC
GAGCCCGCACACGGACTGGGGGTTGTTTACTATCATTCTGGAGGAGGGAG
GGGGGGAAGATGTGGAGGAGGGAGGGCTGCAGATCCGCCGTCGACGACTA
CAGCGGCAACAAGAGGAGGAGGGAGGGGGAGAGGGAATGGAGGAGGAGTT
TGAGTGGGTGGGAGTGCGAGCCGCGCCGGGAACGCTGATTGTGAACTGTG
GTGATTTTTTGTCGTTGGTTTCCAGGCGGGTGCTGGGCGGGATGGAAGGG
AGAAGAGAGGGAGGGATGGGAGACAAGGAAGAGGAGGAAAGCGGGAGGGA
GGGCAGGGAGGGCAGGGCGCCATTTTTTCAATCGCCGGTGCACCGGGTAA
TTCTAGCCAAGGAGCAGCACCGGACGTCGCTTGTCTTCTTTTATTATCCT
TCCTTTGACGCGGTCATGCAGGAGGGAGGGAGGGAGGAAAGAAGAGTAGG
AGAGCCATATAACACACTATTGCAGGTGGAGGAGGAGGATGGGGGGGAGA
AGCGAGGGAGGGAGAGGGAGAGGAGGACTGCGATTTTCGGAGAACACATA
ATGCGGAAATGGGCAGGGGTAAAGTCGTCTTGAGTTGGATTCGCGAGAGC
AGGAACGCGTATCCCGATGCTGAAGATGTGAAAAGAGTAGACCAGAGAAA
CATCAACAGCGCTACATCTCCTTACTCAATCCAACGCAACAATTCCTCTG
ACGTCTCCACCAAGCCTCCCGTCTTGGACGCCATCTCCTCATTCTTCGCC
CTCCCCCTCGAGCAAAAGCAAGCCCTGCCCTCGGTCCATTCCGACGGTTT
CTCAAGGGGCTATATCCCCTTGATGGGCGAGAGTGGTCTCAAAGCTCAGT
ATTGTGAATGGAAGGAGGGGTTCAGCCTGGGGTACGAAGAAAAGGACGAA
GAGAAAGTAAAGGACAAAGGGAAGGAGGAAGGGGAGAGTTGTGTCGCTTC
CCACAGCAGTATTGAAAAGAGCAAGGGAGAGAAGCAGCAGCAGCCGCCAC
AACAGCCCCAGCGACGTTCCTCCAACCCTTTGGAAGGGCCCAACGTGTGG
CCTTCCTCTCCCACCGCCCTCAAGGCCCTCCGAGGAGGAGGAAGAGGAGG
AGGGGAGGGATGGAAGGAGGAGTTAATGACGTTCTTTCGAGACCTGATCA
TTCTCAGTGAGGCTTTGACTCGCGCGTTGTCTTTGGCACTTTATCAAGAG
GAAGAGTGGCTCGGAGATGCCGCGGGTGCGTGCCGTGGCCATCCGCTTGG
CCAAGGAAGGGCGTATCGACATAACACAAAAGGGGCAAGTTGTGGTGGTG
GAAACAGAGGAGGATATTCAAGGGCCGATTCGTTTAAGACTGCGAAAGCA
GGAGGGTATGGAGATTCGGAAGCAGGAGGGCATGGAGGAGACTGAGCTGA
AGGACAGAATAGAAAAAGGTGGCACAAACACGGTGGGCTCGAGCCCGCAC
ACGGACTGGGGGTTGTTTACTATCATTCTGGAGGAGGGAGGGGGGGAAGA
TGTGGAGGAGGGAGGGCTGCAGATCCGCCGTCGACGACTACAGCGGCAAC
AAGAGGAGGAGGGAGGGGGAGAGGGAATGGAGGAGGAGTTTGAGTGGGTG
GGAGTGCGAGCCGCGCCGGGAACGCTGATTGTGAACTGTGGTGATTTTTT
GTCGTTGGTTTCCAGGCGGGTGCTGGGCGGGATGGAAGGGAGAAGAGAGG
GAGGGATGGGAGACAAGGAAGAGGAGGAAAGCGGGAGGGAGGGCAGGGAG
GGCAGGGCGCCATTTTTTCAATCGCCGGTGCACCGGGTAATTCTAGCCAA
GGAGCAGCACCGGACGTCGCTTGTCTTCTTTTATTATCCTTCCTTTGACG
CGGTCATGCAGGAGGGAGGGAGGGAGGAAAGAAGAGTAGGAGAGCCATAT
AACACACTATTGCAGGTGGAGGAGGAGGATGGGGGGGAGAAGCGAGGGAG
GGAGAGGGAGAGGAGGACTGCGATTTTCGGAGAACACATAATGCGGAAAT
GGGCAGGGGTAAAGTCGTCTTGAGTTGGATTCGCGAGAGCAGGAACGCGT
ATCCCGATGCTGAAGATGTGAAAAGAGTAGACCAGAGAAACATCAACAGC
GCTACATCTCCTTACTCAATCCAACGCAACAATTCCTCTGACGTCTCCAC
CAAGCCTCCCGTCTTGGACGCCATCTCCTCATTCTTCGCCCTCCCCCTCG
AGCAAAAGCAAGCCCTGCCCTCGGTCCATTCCGACGGTTTCTCAAGGGGC
TATATCCCCTTGATGGGCGAGAGTGGTCTCAAAGCTCAGTATTGTGAATG
GAAGGAGGGGTTCAGCCTGGGGTACGAAGAAAAGGACGAAGAGAAAGTAA
AGGACAAAGGGAAGGAGGAAGGGGAGAGTTGTGTCGCTTCCCACAGCAGT
ATTGAAAAGAGCAAGGGAGAGAAGCAGCAGCAGCCGCCACAACAGCCCCA
GCGACGTTCCTCCAACCCTTTGGAAGGGCCCAACGTGTGGCCTTCCTCTC
CCACCGCCCTCAAGGCCCTCCGAGGAGGAGGAAGAGGAGGAGGGGAGGGA
TGGAAGGAGGAGTTAATGACGTTCTTTCGAGACCTGATCATTCTCAGTGA
GGCTTTGACTCGCGCGTTGTCTTTGGCACTTTATCAAGAGGAAGAGTGGC
TCGGAGATGCCGCGGGTGCGTGCCGTGGCCATCCGCTTGGCCAAGGAAGG
GCGTATCGACATAACACAAAAGGGGCAAGTTGTGGTGGTGGAAACAGAGG
AGGATATTCAAGGGCCGATTCGTTTAAGACTGCGAAAGCAGGAGGGTATG
GAGATTCGGAAGCAGGAGGGCATGGAGGAGACTGAGCTGAAGGACAGAAT
AGAAAAAGGTGGCACAAACA back to top
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