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Properties
| Property Name | Value |
|---|
| TranscriptId | 612332 |
| Track | FilteredModels2 |
| ProteinId | 612246 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_62 | supercontig | scaffold_62:77643..78854 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10633 ID=mRNA_10633|Name=jgi.p|Nanoce1779_2|612246|organism=Nannochloropsis oceanica|type=mRNA|length=1042bp
CAGCAGCAACAGCAACATCAACAACGACAACAACAACAACAGCAGCAGCT
GCAGCAGCAACAGCAGCAACAGTAGACACACAGCAACACGCTCCCAGGCA
AACAATCCTATCATGCCTCCCACCCCAACCCCCAATGCACCTTCCACCCT
CGCCGCCGCGACCTCTGCTGTCGCCCCCTCTTCGGTCAATGCCTCATCTT
CCCCTCCCGAACCATCCCTCCGTGCTTCACTGCCCTCCACCTTGCCGACT
GAGCTCTTTTTCGACAGAGACCTCGAAGCAACCATCCCCGCCGGCATGGC
CTTGAGTGAATGGAAAGCTCGCGTGGAACTTGCCTGCATGTACCGTGTCT
TTTTTGCACGTGGCTGGGACGAGGAGGTGATAAATCATATTACGTTGCGC
GTGCCCGGTCCAGACGCACACTTTCTCATCAATCCTTTCGGGCTCTACTA
CGGCGAAGTCACGGCGTTGAATCTGGTGAAGATTGACTTGAGCGGACGAG
AGGTCGACCCGAGTCCATACACTGTCAACCGGGCAGGCTTTGTGATCCAC
TCGGCCATCCACGGTGCCAGGCCCGACGACGCCCACTGCGTGATTCACAC
ACACAGTACTCCCGGGGTCGCCGTCGCATGCAAGGAAGAAGGCCTGCGGA
TGGACAACTTTTACTCCATTTTCCTCCACGGCCAGGTGGCCTACCACCCC
TTTGAAGGTGTGACCGTGCGCATGGGCGAGCAGGAACGCCTCGTGGCCAA
CATGGGCCACAAGTCCGTCCTCATCCTCCAGAACCACGGCCTGCTCGTCG
CGGGGCCCTCCACCGCTCGAGCATTCTTCACCTATTACGCCCTCCACCGT
GCCTGTGAGATTCAGTGCGCCACCCAATCCATGCCCGGGCGGAACGTCCC
CATCTCCGAAGCCGTGGCCGTGGGCGGACTTCAAGGCGCGGAGGACGCTG
ATCCGGAAGGTGCATTGCACTGGAAAATCTTCGCGGGGGCGGTCAGAAGG
GCGGGCATTCGGCGGGTGGAGGACGTGACGGGGTGAAGGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|612246 >mRNA_10633-protein ID=mRNA_10633-protein|Name=jgi.p|Nanoce1779_2|612246|organism=Nannochloropsis oceanica|type=polypeptide|length=308bp
MPPTPTPNAPSTLAAATSAVAPSSVNASSSPPEPSLRASLPSTLPTELFF
DRDLEATIPAGMALSEWKARVELACMYRVFFARGWDEEVINHITLRVPGP
DAHFLINPFGLYYGEVTALNLVKIDLSGREVDPSPYTVNRAGFVIHSAIH
GARPDDAHCVIHTHSTPGVAVACKEEGLRMDNFYSIFLHGQVAYHPFEGV
TVRMGEQERLVANMGHKSVLILQNHGLLVAGPSTARAFFTYYALHRACEI
QCATQSMPGRNVPISEAVAVGGLQGAEDADPEGALHWKIFAGAVRRAGIR
RVEDVTG* back to topmRNA from alignment at scaffold_62:77643..78854+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10633 ID=mRNA_10633|Name=jgi.p|Nanoce1779_2|612246|organism=Nannochloropsis oceanica|type=mRNA|length=1212bp|location=Sequence derived from alignment at scaffold_62:77643..78854+ (Nannochloropsis oceanica)
CAGCAGCAACAGCAACATCAACAACGACAACAACAACAACAGCAGCAGCT
GCAGCAGCAACAGCAGCAACAGTAGACACACAGCAACACGCTCCCAGGCA
AACAATCCTATCATGCCTCCCACCCCAACCCCCAATGCACCTTCCACCCT
CGCCGCCGCGACCTCTGCTGTCGCCCCCTCTTCGGTCAATGCCTCATCTT
CCCCTCCCGAACCATCCCTCCGTGCTTCACTGCCCTCCACCTTGCCGACT
GAGCTCTTTTTCGACAGAGACCTCGAAGCAACCATCCCCGCCGGCATGGC
CTTGAGTGAATGGAAAGCTCGCGTGGAACTTGCCTGCATGTACCGTGTCT
TTTTTGCACGTGGCTGGGACGAGGAGGTGATAAATCATATTACGTTGCGC
GTGCCCGGTCCAGACGCACACTTTCTCATCAATCCTTTCGGGCTCTACTA
CGGCGAAGTCACGGCGTTGAATCTGGTGAAGATTGACTTGAGCGGACGAG
AGGTCGACCCGAGTCCATACACTGTCAACCGGGCAGGCTTTGTGATCCAC
TCGGCCATCCACGGTGCCAGGCCCGACGACGCCCACTGCGTGATTCACAC
ACACAGTACTCCCGGGGTCGCCGTCGCATGCAAGGAAGAAGGCCTGCGGA
TGGACAACTTTTACTCCATTTTCCTCCACGGCCAGGTGGCCTACCACCCC
TTTGAAGGTGAGAGAGAGAGATCGAGCATGGACGTACTCGTGCCCTCCTT
CCCTTGCTCCATTTCTTTTCTCCTCGGCAGCATCAGCGCATTGATCGATA
GCGAAAGTGAAGGTTGAGCATCAGACGTAAAAGTGTCCTCCCTCGCTCCT
TCCCTCCCTCCTTCCCTCCCTCTACAGGTGTGACCGTGCGCATGGGCGAG
CAGGAACGCCTCGTGGCCAACATGGGCCACAAGTCCGTCCTCATCCTCCA
GAACCACGGCCTGCTCGTCGCGGGGCCCTCCACCGCTCGAGCATTCTTCA
CCTATTACGCCCTCCACCGTGCCTGTGAGATTCAGTGCGCCACCCAATCC
ATGCCCGGGCGGAACGTCCCCATCTCCGAAGCCGTGGCCGTGGGCGGACT
TCAAGGCGCGGAGGACGCTGATCCGGAAGGTGCATTGCACTGGAAAATCT
TCGCGGGGGCGGTCAGAAGGGCGGGCATTCGGCGGGTGGAGGACGTGACG
GGGTGAAGGGAG back to topCoding sequence (CDS) from alignment at scaffold_62:77643..78854+ >mRNA_10633 ID=mRNA_10633|Name=jgi.p|Nanoce1779_2|612246|organism=Nannochloropsis oceanica|type=CDS|length=1848bp|location=Sequence derived from alignment at scaffold_62:77643..78854+ (Nannochloropsis oceanica)
ATGCCTCCCACCCCAACCCCCAATGCACCTTCCACCCTCGCCGCCGCGAC
CTCTGCTGTCGCCCCCTCTTCGGTCAATGCCTCATCTTCCCCTCCCGAAC
CATCCCTCCGTGCTTCACTGCCCTCCACCTTGCCGACTGAGCTCTTTTTC
GACAGAGACCTCGAAGCAACCATCCCCGCCGGCATGGCCTTGAGTGAATG
GAAAGCTCGCGTGGAACTTGCCTGCATGTACCGTGTCTTTTTTGCACGTG
GCTGGGACGAGGAGGTGATAAATCATATTACGTTGCGCGTGCCCGGTCCA
GACGCACACTTTCTCATCAATCCTTTCGGGCTCTACTACGGCGAAGTCAC
GGCGTTGAATCTGGTGAAGATTGACTTGAGCGGACGAGAGGTCGACCCGA
GTCCATACACTGTCAACCGGGCAGGCTTTGTGATCCACTCGGCCATCCAC
GGTGCCAGGCCCGACGACGCCCACTGCGTGATTCACACACACAGTACTCC
CGGGGTCGCCGTCGCATGCAAGGAAGAAGGCCTGCGGATGGACAACTTTT
ACTCCATTTTCCTCCACGGCCAGGTGGCCTACCACCCCTTTGAAGGTGTG
ACCGTGCGCATGGGCGAGCAGGAACGCCTCGTGGCCAACATGGGCCACAA
GTCCGTCCTCATCCTCCAGAACCACGGCCTGCTCGTCGCGGGGCCCTCCA
CCGCTCGAGCATTCTTCACCTATTACGCCCTCCACCGTGCCTGTGAGATT
CAGTGCGCCACCCAATCCATGCCCGGGCGGAACGTCCCCATCTCCGAAGC
CGTGGCCGTGGGCGGACTTCAAGGCGCGGAGGACGCTGATCCGGAAGGTG
CATTGCACTGGAAAATCTTCGCGGGGGCGGTCAGAAGGGCGGGCATTCGG
CGGGTGGAGGACGTGACGGGGTGAATGCCTCCCACCCCAACCCCCAATGC
ACCTTCCACCCTCGCCGCCGCGACCTCTGCTGTCGCCCCCTCTTCGGTCA
ATGCCTCATCTTCCCCTCCCGAACCATCCCTCCGTGCTTCACTGCCCTCC
ACCTTGCCGACTGAGCTCTTTTTCGACAGAGACCTCGAAGCAACCATCCC
CGCCGGCATGGCCTTGAGTGAATGGAAAGCTCGCGTGGAACTTGCCTGCA
TGTACCGTGTCTTTTTTGCACGTGGCTGGGACGAGGAGGTGATAAATCAT
ATTACGTTGCGCGTGCCCGGTCCAGACGCACACTTTCTCATCAATCCTTT
CGGGCTCTACTACGGCGAAGTCACGGCGTTGAATCTGGTGAAGATTGACT
TGAGCGGACGAGAGGTCGACCCGAGTCCATACACTGTCAACCGGGCAGGC
TTTGTGATCCACTCGGCCATCCACGGTGCCAGGCCCGACGACGCCCACTG
CGTGATTCACACACACAGTACTCCCGGGGTCGCCGTCGCATGCAAGGAAG
AAGGCCTGCGGATGGACAACTTTTACTCCATTTTCCTCCACGGCCAGGTG
GCCTACCACCCCTTTGAAGGTGTGACCGTGCGCATGGGCGAGCAGGAACG
CCTCGTGGCCAACATGGGCCACAAGTCCGTCCTCATCCTCCAGAACCACG
GCCTGCTCGTCGCGGGGCCCTCCACCGCTCGAGCATTCTTCACCTATTAC
GCCCTCCACCGTGCCTGTGAGATTCAGTGCGCCACCCAATCCATGCCCGG
GCGGAACGTCCCCATCTCCGAAGCCGTGGCCGTGGGCGGACTTCAAGGCG
CGGAGGACGCTGATCCGGAAGGTGCATTGCACTGGAAAATCTTCGCGGGG
GCGGTCAGAAGGGCGGGCATTCGGCGGGTGGAGGACGTGACGGGGTGA back to top
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