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Properties
Property Name | Value |
TranscriptId | 379408 |
Track | FilteredModels2 |
ProteinId | 379322 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_62 | supercontig | scaffold_62:6912..11201 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10609 ID=mRNA_10609|Name=jgi.p|Nanoce1779_2|379322|organism=Nannochloropsis oceanica|type=mRNA|length=2046bp CTCCCTTTGCCTCGGCCTCGCTCCTCCTCTTCCATCGCCTCCCTGACCTC TGTCACGGGACCTTTCGTCCCCTCCCTCTCCCCCTCCTCCTTTGGTGCTA TGCCCTCCCCCGGCGCCTCGCCCCTTCCCCTTCACCACCACCCCTGCGGA GGGGAGGGCGGGGGGGAGGGAGGGGGCGTGAACTGCACCAACAGCAATAA TAGCAGCTTGCGTAACACCAACTACCACCACCCGCCGCAGCAGCAGCAGC AACAACAACCACAACAACAACCACAACAACCACAACAACCACAACAACCA CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA ACAACAACAACAGCAACAGCAGCAGCAGCAGCAGCGCCATTATCAAGGAG AGGGAATGGCCAACAGAGGAGGTCTAGGAGGGCAACAGCCTCTCCGTCCT GTCTTCCGGGTAGCAGCCCCTCCTCTGGAGGGAGGCGACAATGTGCACCA GCAGCACCAGCAGCACCAGCAGCCTTTTTCATCACATCATAATCATCATC ATCAGCAGCAGCAGCAGCAGCAGCGGTTGGAGGAGAGTGAGGAGAGACCT CGTGCGGACTCGCTCTCCTCCATTTCCACCATCGGAAGCGTCACCTCCGA TAATTCACCCTACTCCCACCACCACCAGCAGCAGCAGCAGCAGCAACAGC AGCAACAGCATCATGATCATCATTCCTCCTATCAGCAGCCACCGCAGCAC CACCAGCAGCACCAACAACAACAGAGCTATTACGATCCTCATCCTCCCTC CATCACTCCAGCTCCTGGCGGCCTCTCCCTCCTCCCCTCCTCCTACTCCT ACCCTCACCCTTCCTCCCTCCCGGCTCCCCCCTCCTCTCCGGTTGAAAAC TCATTTCCTTCGGCTCTTCCTCCTCCCTTATCGGGTCCTGGACCTTCCTT CCCAGGCCGCCATTCCCCTTTGACCACCCCCTACATCACCACCGCTCCTT CCGCCGCCAGCAGGAGCAGCAGTAGCAGCAGCAACAACAAGAAGCGACCT CGGCCCTCCCACTCTTCTTCAAAGTCTGTTGAGGAAGAGGAGGGGAGGGA GGGAGACCACCACTACCACCAGCAACAGCAGCACCACCACTATCAGCGGC AGCAGCAGCAGCAGCAGCATGAGCGAATGGGCGCCAAGCCCAGTCCAAAT AGGGGGGTTACCAACATCAGCACCAACAGCGGCAACGAGGAGGAAGAGGA GGAGGAAGAGCAGGAGGAGGAGGGGAGAAAGAGGGATGACGTGGAGCACC TCGTCGTCGCCACTGCTCTTCAGAAGCTTCAGGAGTCTTCCCCTCCCTCT GCTAGCTCTCCCTCTTCCGACCTTCTCTCCTCTTCCCCACCCTCCCTCGG CACCACCATCCCCGGCAGCATAAACGATGCTCGAGAAGGACATAACATCA CCCACGGCAACCACCACCACCACCACAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGCGATAGGATTGAGGA CGTGGTCATCCCCTGCCTCAGCGACGCTCATCAGATTGTGTCCGACTTTT CGACTGCTACTTCCGCCTCGGGCGAAACCAAGAACCCCACAAAAGCGCTG TCAAACTCATCCTCCTCTTCTTACCTTCGAGATATGAATGAAGAGAGCGG GATAGAAGGCACCACCGACAACCTCAGTCGACGAGAATCGCACTCCCTCC TTCCCTCCCTCCCTCCCTTTTCGGAAGAGCAGGAGACAATAAGGCTGTAA AAAGTTGAAGGAGGGAGGTAGAGAAGATAGGAGGGAGGGCGGGAGGGTTG ATAGCATCATGTACAGTTGTGGCCGCTGAGTGGTTTGGGCCGGAGAGGAG GAAGGAAGGGAGAAGGAGATTTCTGGAGGAAGTGTTCATGTTTAGTAAAG AGTAGTAGTAGTAGTGAGGAGGAGGACGACGACGACGAGGACGACGACGA GAAGGAGGCGATAGGGATAGGGATAATATAATAATTGACAGTGCAA back to topprotein sequence of jgi.p|Nanoce1779_2|379322 >mRNA_10609-protein ID=mRNA_10609-protein|Name=jgi.p|Nanoce1779_2|379322|organism=Nannochloropsis oceanica|type=polypeptide|length=567bp MPSPGASPLPLHHHPCGGEGGGEGGGVNCTNSNNSSLRNTNYHHPPQQQQ QQQPQQQPQQPQQPQQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQRHYQG EGMANRGGLGGQQPLRPVFRVAAPPLEGGDNVHQQHQQHQQPFSSHHNHH HQQQQQQQRLEESEERPRADSLSSISTIGSVTSDNSPYSHHHQQQQQQQQ QQQHHDHHSSYQQPPQHHQQHQQQQSYYDPHPPSITPAPGGLSLLPSSYS YPHPSSLPAPPSSPVENSFPSALPPPLSGPGPSFPGRHSPLTTPYITTAP SAASRSSSSSSNNKKRPRPSHSSSKSVEEEEGREGDHHYHQQQQHHHYQR QQQQQQHERMGAKPSPNRGVTNISTNSGNEEEEEEEEQEEEGRKRDDVEH LVVATALQKLQESSPPSASSPSSDLLSSSPPSLGTTIPGSINDAREGHNI THGNHHHHHSSSSSSSSSSSSSSSSSSSCDRIEDVVIPCLSDAHQIVSDF STATSASGETKNPTKALSNSSSSSYLRDMNEESGIEGTTDNLSRRESHSL LPSLPPFSEEQETIRL* back to topmRNA from alignment at scaffold_62:6912..11201+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10609 ID=mRNA_10609|Name=jgi.p|Nanoce1779_2|379322|organism=Nannochloropsis oceanica|type=mRNA|length=4290bp|location=Sequence derived from alignment at scaffold_62:6912..11201+ (Nannochloropsis oceanica) CTCCCTTTGCCTCGGCCTCGGTCTCCTCTGTGGACGGACGAGGAGGAGGA
GGAGGAGGGCAGGCGCACTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGGAGGGAGAGCTTGGGCTGGTGCATCATGAGCCGCAGCTGCACC
AACAACGCAGCTATCAACAGTCCCTGGATCATCAGCAACAGCAACAGCAG
CAACAGCAACAGGGATCTTCCTCCTCCACCCTCCCTGCATTGCATGAATT
TTTCCTCGATCCCATGCGGACTGGTGAGGGAGGGAGGGATGGAGGGAGGA
GGGCATGAAATATACCCACATCCATCACACACACGGCTCTCCGAGTCGAG
AATCTTATACTCTTCTCTTCCCTCCCTCCTTCCCTCCCGTCCTTCCTCCC
TTCCTCCCTCTCCCTTACTTAGCCAATATCAACCGTCGCAAGCTTCTGAT
CGTCCTCAGGGCCTGGGGAATGCTCGCGGCCAAGACATTGACCAAATCCA
CTTCTTCTTTCCCTCCCTCCTTCCCTCCCCATCACCCACCCGGAGGCATG
AACCTCAGTGGGGTCAATGGACAGGTGAGTCCCTCCCTCCCTCCCTCCTT
CCATCCCTCTCACTATCTTCCCATCGGTCATGGTCTCATCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGTTCTTCCGCAT
CCTCCAAGGCGTGGCCAGCACCTTCGGGCTCGATCTTCAGGTAAGAAGAG
AGGGAGGGAGGGAGGGAGGCAGCGAGGGAAGGAGGATGGTGATGCTTTGC
CTCGAATCACTCGTTAATAGCTGTGTCCCTGACCATGCCACCCCCTCCCT
CCTTCCCGCCCTCCCTCCCTCCCTCAGGATGTCCTCCACCTGGAGCCAGA
GGTGTACGCAGCACTGTGTGAGGGGAATGGAAGGAACGAGCGGAGAGGGA
CCGCGGGAGGGGCCCCGCGCGAGGTGCCCATGTACATCAAGGTGGGGAGG
GAGGGAGGGGAGGAGGGTGACTTTTTGAATTTTCGAATATGGGCATGACG
TTCGAATCTCATTGTTCTTCCCCAGCTCTCAAGGAAGGAGTCCTTGTTCT
CAAGCATGCACCTATCTTGCCTTCCCTTCCTCCTTCCCCCCCTCCCTCAG
GCCCTGGACTGCGAGGCGTTCGCCGTCTCTCGACGTGTGCTTTGCCAGGG
GGAGAGCAGCTACACCTGCAACGAGGTGTTTTCCTCCATGTTTGCAACCA
AGGCCATGGCTGAACGGAGTCCGGAGCGAGCGACGGGTATTGATATCTGG
CTAGGGTGAGTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCGCCAGGTCCTCCCCTTCCCTTTGGTACATGAAGCCTTAATCTCCCTCC
CTCCCTCCCTCCCTCCTCAGCTGCATCGATTCGGAGGACCGCAAGGAGTT
TCTGCATTCCTTCCTCTCCACCCTTCTCGCCTCCCCCTCCCCCTGCACCG
AGACGGCCGGAATCTTCAAGGTACGTGTGGAGGAGAGGGAGAAAAAGGTG
GGAAAAGAAGGATGGAAAAAAGGAGGGAGAGAAGGAAAGCGCGGAGGAGT
GAGAGGGAGTAGAACGGATGCTCGTCACGAAACAAAGTGAAAAGAGGAAG
GCCAATGTTCCCAAGCCCTCAAGCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCTAGTGCAAGGACAAGAACGGTCGCGTCATAGCAACCCACC
TCAGGCTGCGTTCCTATTACTCCCAAGCGGGCGACTACGTCGCTTATTCC
CTCTTCCTTGCCCCGCTTCCTCCTGTCCGCCTGGGCTCCCTCCTTGCTCC
TCCTGCACACGCACCCACGCTACTGCCGCACCCACGGCAGGTACGCCCTC
CTTCGTGCCTTCCCCCGCTGCCTCACTCTTTCCCTCTTCTTCCATTCCTT
TTTGTCTTCCTTCTTTCTTCGCTCCGTCTTTTCTCAACCACTCTCTCTCT
TTCTCTCTCACACACACTCTCACACTCTCTCACTCACTCACTCACTCTCT
CCCTATTACTCTCTCTCTGTCTCTCTCTCTCTCTTACACACACACTTTCT
CTCTCTTTGCGGGACCCTAGCAGATGGCCAGCCATATCCCTCCCTCCTCC
TCCTCCTCCTCTTCCATCGCCTCCCTGACCTCTGTCACGGGACCTTTCGT
CCCCTCCCTCTCCCCCTCCTCCTTTGGTGCTATGCCCTCCCCCGGCGCCT
CGCCCCTTCCCCTTCACCACCACCCCTGCGGAGGGGAGGGCGGGGGGGAG
GGAGGGGGCGTGAACTGCACCAACAGCAATAATAGCAGCTTGCGTAACAC
CAACTACCACCACCCGCCGCAGCAGCAGCAGCAACAACAACCACAACAAC
AACCACAACAACCACAACAACCACAACAACCACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAGCAACA
GCAGCAGCAGCAGCAGCGCCATTATCAAGGAGAGGGAATGGCCAACAGAG
GAGGTCTAGGAGGGCAACAGCCTCTCCGTCCTGTCTTCCGGGTAGCAGCC
CCTCCTCTGGAGGGAGGCGACAATGTGCACCAGCAGCACCAGCAGCACCA
GCAGCCTTTTTCATCACATCATAATCATCATCATCAGCAGCAGCAGCAGC
AGCAGCGGTTGGAGGAGAGTGAGGAGAGACCTCGTGCGGACTCGCTCTCC
TCCATTTCCACCATCGGAAGCGTCACCTCCGATAATTCACCCTACTCCCA
CCACCACCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCATCATGATC
ATCATTCCTCCTATCAGCAGCCACCGCAGCACCACCAGCAGCACCAACAA
CAACAGAGCTATTACGATCCTCATCCTCCCTCCATCACTCCAGCTCCTGG
CGGCCTCTCCCTCCTCCCCTCCTCCTACTCCTACCCTCACCCTTCCTCCC
TCCCGGCTCCCCCCTCCTCTCCGGTTGAAAACTCATTTCCTTCGGCTCTT
CCTCCTCCCTTATCGGGTCCTGGACCTTCCTTCCCAGGCCGCCATTCCCC
TTTGACCACCCCCTACATCACCACCGCTCCTTCCGCCGCCAGCAGGAGCA
GCAGTAGCAGCAGCAACAACAAGAAGCGACCTCGGCCCTCCCACTCTTCT
TCAAAGTCTGTTGAGGAAGAGGAGGGGAGGGAGGGAGACCACCACTACCA
CCAGCAACAGCAGCACCACCACTATCAGCGGCAGCAGCAGCAGCAGCAGC
ATGAGCGAATGGGCGCCAAGCCCAGTCCAAATAGGGGGGTTACCAACATC
AGCACCAACAGCGGCAACGAGGAGGAAGAGGAGGAGGAAGAGCAGGAGGA
GGAGGGGAGAAAGAGGGATGACGTGGAGCACCTCGTCGTCGCCACTGCTC
TTCAGAAGCTTCAGGAGTCTTCCCCTCCCTCTGCTAGCTCTCCCTCTTCC
GACCTTCTCTCCTCTTCCCCACCCTCCCTCGGCACCACCATCCCCGGCAG
CATAAACGATGCTCGAGAAGGACATAACATCACCCACGGCAACCACCACC
ACCACCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGTTGCGATAGGATTGAGGACGTGGTCATCCCCTGCCT
CAGCGACGCTCATCAGATTGTGTCCGACTTTTCGACTGCTACTTCCGCCT
CGGGCGAAACCAAGGTTAGTCCTCCCTCCCTCCCTCCCTCCCTTTCTTTA
TTTGCTTTCTTTTTCCCCCACCTCTAGTCTCATTGCCTATTCCTTCTTCC
TTCCCTCCCTCACTCCCTCCCTACAGAACCCCACAAAAGCGCTGTCAAAC
TCATCCTCCTCTTCTTACCTTCGAGATATGAATGAAGAGAGCGGGATAGA
AGGCACCACCGACAACCTCAGTCGACGAGAATCGCACTCCCTCCTTCCCT
CCCTCCCTCCCTTTTCGGAAGAGCAGGAGACAATAAGGCTGTAAAAAGTT
GAAGGAGGGAGGTAGAGAAGATAGGAGGGAGGGCGGGAGGGTTGATAGCA
TCATGTACAGTTGTGGCCGCTGAGTGGTTTGGGCCGGAGAGGAGGAAGGA
AGGGAGAAGGAGATTTCTGGAGGAAGTGTTCATGTTTAGTAAAGAGTAGT
AGTAGTAGTGAGGAGGAGGACGACGACGACGAGGACGACGACGAGAAGGA
GGCGATAGGGATAGGGATAATATAATAATTGACAGTGCAA back to topCoding sequence (CDS) from alignment at scaffold_62:6912..11201+ >mRNA_10609 ID=mRNA_10609|Name=jgi.p|Nanoce1779_2|379322|organism=Nannochloropsis oceanica|type=CDS|length=3402bp|location=Sequence derived from alignment at scaffold_62:6912..11201+ (Nannochloropsis oceanica) ATGCCCTCCCCCGGCGCCTCGCCCCTTCCCCTTCACCACCACCCCTGCGG AGGGGAGGGCGGGGGGGAGGGAGGGGGCGTGAACTGCACCAACAGCAATA ATAGCAGCTTGCGTAACACCAACTACCACCACCCGCCGCAGCAGCAGCAG CAACAACAACCACAACAACAACCACAACAACCACAACAACCACAACAACC ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAACAGCAACAGCAGCAGCAGCAGCAGCGCCATTATCAAGGA GAGGGAATGGCCAACAGAGGAGGTCTAGGAGGGCAACAGCCTCTCCGTCC TGTCTTCCGGGTAGCAGCCCCTCCTCTGGAGGGAGGCGACAATGTGCACC AGCAGCACCAGCAGCACCAGCAGCCTTTTTCATCACATCATAATCATCAT CATCAGCAGCAGCAGCAGCAGCAGCGGTTGGAGGAGAGTGAGGAGAGACC TCGTGCGGACTCGCTCTCCTCCATTTCCACCATCGGAAGCGTCACCTCCG ATAATTCACCCTACTCCCACCACCACCAGCAGCAGCAGCAGCAGCAACAG CAGCAACAGCATCATGATCATCATTCCTCCTATCAGCAGCCACCGCAGCA CCACCAGCAGCACCAACAACAACAGAGCTATTACGATCCTCATCCTCCCT CCATCACTCCAGCTCCTGGCGGCCTCTCCCTCCTCCCCTCCTCCTACTCC TACCCTCACCCTTCCTCCCTCCCGGCTCCCCCCTCCTCTCCGGTTGAAAA CTCATTTCCTTCGGCTCTTCCTCCTCCCTTATCGGGTCCTGGACCTTCCT TCCCAGGCCGCCATTCCCCTTTGACCACCCCCTACATCACCACCGCTCCT TCCGCCGCCAGCAGGAGCAGCAGTAGCAGCAGCAACAACAAGAAGCGACC TCGGCCCTCCCACTCTTCTTCAAAGTCTGTTGAGGAAGAGGAGGGGAGGG AGGGAGACCACCACTACCACCAGCAACAGCAGCACCACCACTATCAGCGG CAGCAGCAGCAGCAGCAGCATGAGCGAATGGGCGCCAAGCCCAGTCCAAA TAGGGGGGTTACCAACATCAGCACCAACAGCGGCAACGAGGAGGAAGAGG AGGAGGAAGAGCAGGAGGAGGAGGGGAGAAAGAGGGATGACGTGGAGCAC CTCGTCGTCGCCACTGCTCTTCAGAAGCTTCAGGAGTCTTCCCCTCCCTC TGCTAGCTCTCCCTCTTCCGACCTTCTCTCCTCTTCCCCACCCTCCCTCG GCACCACCATCCCCGGCAGCATAAACGATGCTCGAGAAGGACATAACATC ACCCACGGCAACCACCACCACCACCACAGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGCGATAGGATTGAGG ACGTGGTCATCCCCTGCCTCAGCGACGCTCATCAGATTGTGTCCGACTTT TCGACTGCTACTTCCGCCTCGGGCGAAACCAAGAACCCCACAAAAGCGCT GTCAAACTCATCCTCCTCTTCTTACCTTCGAGATATGAATGAAGAGAGCG GGATAGAAGGCACCACCGACAACCTCAGTCGACGAGAATCGCACTCCCTC CTTCCCTCCCTCCCTCCCTTTTCGGAAGAGCAGGAGACAATAAGGCTGTA AATGCCCTCCCCCGGCGCCTCGCCCCTTCCCCTTCACCACCACCCCTGCG GAGGGGAGGGCGGGGGGGAGGGAGGGGGCGTGAACTGCACCAACAGCAAT AATAGCAGCTTGCGTAACACCAACTACCACCACCCGCCGCAGCAGCAGCA GCAACAACAACCACAACAACAACCACAACAACCACAACAACCACAACAAC CACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAACAGCAACAGCAGCAGCAGCAGCAGCGCCATTATCAAGG AGAGGGAATGGCCAACAGAGGAGGTCTAGGAGGGCAACAGCCTCTCCGTC CTGTCTTCCGGGTAGCAGCCCCTCCTCTGGAGGGAGGCGACAATGTGCAC CAGCAGCACCAGCAGCACCAGCAGCCTTTTTCATCACATCATAATCATCA TCATCAGCAGCAGCAGCAGCAGCAGCGGTTGGAGGAGAGTGAGGAGAGAC CTCGTGCGGACTCGCTCTCCTCCATTTCCACCATCGGAAGCGTCACCTCC GATAATTCACCCTACTCCCACCACCACCAGCAGCAGCAGCAGCAGCAACA GCAGCAACAGCATCATGATCATCATTCCTCCTATCAGCAGCCACCGCAGC ACCACCAGCAGCACCAACAACAACAGAGCTATTACGATCCTCATCCTCCC TCCATCACTCCAGCTCCTGGCGGCCTCTCCCTCCTCCCCTCCTCCTACTC CTACCCTCACCCTTCCTCCCTCCCGGCTCCCCCCTCCTCTCCGGTTGAAA ACTCATTTCCTTCGGCTCTTCCTCCTCCCTTATCGGGTCCTGGACCTTCC TTCCCAGGCCGCCATTCCCCTTTGACCACCCCCTACATCACCACCGCTCC TTCCGCCGCCAGCAGGAGCAGCAGTAGCAGCAGCAACAACAAGAAGCGAC CTCGGCCCTCCCACTCTTCTTCAAAGTCTGTTGAGGAAGAGGAGGGGAGG GAGGGAGACCACCACTACCACCAGCAACAGCAGCACCACCACTATCAGCG GCAGCAGCAGCAGCAGCAGCATGAGCGAATGGGCGCCAAGCCCAGTCCAA ATAGGGGGGTTACCAACATCAGCACCAACAGCGGCAACGAGGAGGAAGAG GAGGAGGAAGAGCAGGAGGAGGAGGGGAGAAAGAGGGATGACGTGGAGCA CCTCGTCGTCGCCACTGCTCTTCAGAAGCTTCAGGAGTCTTCCCCTCCCT CTGCTAGCTCTCCCTCTTCCGACCTTCTCTCCTCTTCCCCACCCTCCCTC GGCACCACCATCCCCGGCAGCATAAACGATGCTCGAGAAGGACATAACAT CACCCACGGCAACCACCACCACCACCACAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTGCGATAGGATTGAG GACGTGGTCATCCCCTGCCTCAGCGACGCTCATCAGATTGTGTCCGACTT TTCGACTGCTACTTCCGCCTCGGGCGAAACCAAGAACCCCACAAAAGCGC TGTCAAACTCATCCTCCTCTTCTTACCTTCGAGATATGAATGAAGAGAGC GGGATAGAAGGCACCACCGACAACCTCAGTCGACGAGAATCGCACTCCCT CCTTCCCTCCCTCCCTCCCTTTTCGGAAGAGCAGGAGACAATAAGGCTGT AA back to top
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