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Properties
| Property Name | Value |
|---|
| TranscriptId | 622488 |
| Track | FilteredModels2 |
| ProteinId | 622402 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1107768..1108860 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1055 ID=mRNA_1055|Name=jgi.p|Nanoce1779_2|622402|organism=Nannochloropsis oceanica|type=mRNA|length=735bp
ATGGCCGCCGCCCTTCTTGCAGACTATCAAAAAACCTGCACGGACTTGTC
CGCCGCCATTTTTAAGTGGGCTGACCCTGCGGGCGCCATGGTCAAGGCGC
CCACTCGCACCTGGCCCTTGGCGGGTTTGGACGTGGCCCTGGCTATCGCG
GCTTTCTACCTCATCATTGTCTTTGTGGGTTCGGCTGCCATTCAGGCCTA
CCGTAACAACTACACCTTCCTCCCTTGCGAGCCGTTCAATGCTACCAACC
CACCAATCGCCCCTCTCCTGTGGCTCTTCTACGTCTCCAAGGTCTTCGAC
TTCGCCGACACCGTCTTCATCATCCTGGGAAAGAAGTGGAACCAGCTATC
ATTTCTGCATGTGTACCACCACGTGACCATCTTTTTGGTGTATTGGTTGA
ATTTGAATGCGGGATATGATGGCGATATTTTCCTGACAGTCATTCTTAAC
GGGGCAATCCACACGGTAATGTACACTTACTACTTCCTCTCCATGCACAC
CAAGGACATTTGGTGGAAGAAGTACTTGACACTGTTCCAGATTATTCAGT
TCCTGACCATGAATGCTCAGGCGATCTACTTGTTATGTGTGGGTTGCAAG
GGGTTCTCGCCTCAGATTACGAAGCTGTATCTTGGGTACATCCTGTCGCT
GTTGGTGCTTTTCCTCAATTTTTACTTCAAATCGTATTCTGGTGTGAAGC
CCAATGGTAAGAAGCCGGTTTCCAAGAAGGCTTAA back to topprotein sequence of jgi.p|Nanoce1779_2|622402 >mRNA_1055-protein ID=mRNA_1055-protein|Name=jgi.p|Nanoce1779_2|622402|organism=Nannochloropsis oceanica|type=polypeptide|length=245bp
MAAALLADYQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIA
AFYLIIVFVGSAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFD
FADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILN
GAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCK
GFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA* back to topmRNA from alignment at scaffold_2:1107768..1108860- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1055 ID=mRNA_1055|Name=jgi.p|Nanoce1779_2|622402|organism=Nannochloropsis oceanica|type=mRNA|length=1093bp|location=Sequence derived from alignment at scaffold_2:1107768..1108860- (Nannochloropsis oceanica)
ATGGCCGCCGCCCTTCTTGCAGACTATCAAAAAACCTGCACGGACTTGTC
CGCCGCCATTTTTAAGTGGGCTGACCCTGCGGGCGCCATGGTCAAGGCGC
CCACTCGCACCTGGCCCTTGGCGGGTTTGGACGTGGCCCTGGCTATCGCG
GCTTTCTACCTCATCATTGTCTTTGTGGGTTCGGTACGTCTTTGGAATAC
CGTGTGTATAGAAAGAGAGATTAGGCGTCGATAAATAGAGTTAGACTGCG
TAGCGTATCCAGAGCTGCAACATCTCAGCAGGCGCTTCCACCTCTCTTAT
CCCCTGTTCTCCACCTATCTTCTACCTCCCCTCCCCAAAGGCCATGATGA
AGAACGCACAGCCAGTAAAATTGTACGGCTTGCAATTCTAAATCTCCAGG
TCGCCTATGCTAAATCGAGGCTGCCATTCAGGCCTACCGTAACGTAGGTC
CTCCATCCACCCTTTTCCTCCTTACCATCTCCAATTCCCGCCCCCTCCCT
TTGTGTTTTAAGTGAAGAAATACAAAATAGCAAAACTTACTTTCGCCTCT
GCTAAAATCTAACAGAACTACACCTTCCTCCCTTGCGAGCCGTTCAATGC
TACCAACCCACCAATCGCCCCTCTCCTGTGGCTCTTCTACGTCTCCAAGG
TCTTCGACTTCGCCGACACCGTCTTCATCATCCTGGGAAAGAAGTGGAAC
CAGCTATCATTTCTGCATGTGTACCACCACGTGACCATCTTTTTGGTGTA
TTGGTTGAATTTGAATGCGGGATATGATGGCGATATTTTCCTGACAGTCA
TTCTTAACGGGGCAATCCACACGGTAATGTACACTTACTACTTCCTCTCC
ATGCACACCAAGGACATTTGGTGGAAGAAGTACTTGACACTGTTCCAGAT
TATTCAGTTCCTGACCATGAATGCTCAGGCGATCTACTTGTTATGTGTGG
GTTGCAAGGGGTTCTCGCCTCAGATTACGAAGCTGTATCTTGGGTACATC
CTGTCGCTGTTGGTGCTTTTCCTCAATTTTTACTTCAAATCGTATTCTGG
TGTGAAGCCCAATGGTAAGAAGCCGGTTTCCAAGAAGGCTTAA back to topCoding sequence (CDS) from alignment at scaffold_2:1107768..1108860- >mRNA_1055 ID=mRNA_1055|Name=jgi.p|Nanoce1779_2|622402|organism=Nannochloropsis oceanica|type=CDS|length=2205bp|location=Sequence derived from alignment at scaffold_2:1107768..1108860- (Nannochloropsis oceanica)
AACTACACCTTCCTCCCTTGCGAGCCGTTCAATGCTACCAACCCACCAAT
CGCCCCTCTCCTGTGGCTCTTCTACGTCTCCAAGGTCTTCGACTTCGCCG
ACACCGTCTTCATCATCCTGGGAAAGAAGTGGAACCAGCTATCATTTCTG
CATGTGTACCACCACGTGACCATCTTTTTGGTGTATTGGTTGAATTTGAA
TGCGGGATATGATGGCGATATTTTCCTGACAGTCATTCTTAACGGGGCAA
TCCACACGGTAATGTACACTTACTACTTCCTCTCCATGCACACCAAGGAC
ATTTGGTGGAAGAAGTACTTGACACTGTTCCAGATTATTCAGTTCCTGAC
CATGAATGCTCAGGCGATCTACTTGTTATGTGTGGGTTGCAAGGGGTTCT
CGCCTCAGATTACGAAGCTGTATCTTGGGTACATCCTGTCGCTGTTGGTG
CTTTTCCTCAATTTTTACTTCAAATCGTATTCTGGTGTGAAGCCCAATGG
TAAGAAGCCGGTTTCCAAGAAGGCTTAAGCTGCCATTCAGGCCTACCGTA
ACATGGCCGCCGCCCTTCTTGCAGACTATCAAAAAACCTGCACGGACTTG
TCCGCCGCCATTTTTAAGTGGGCTGACCCTGCGGGCGCCATGGTCAAGGC
GCCCACTCGCACCTGGCCCTTGGCGGGTTTGGACGTGGCCCTGGCTATCG
CGGCTTTCTACCTCATCATTGTCTTTGTGGGTTCGAACTACACCTTCCTC
CCTTGCGAGCCGTTCAATGCTACCAACCCACCAATCGCCCCTCTCCTGTG
GCTCTTCTACGTCTCCAAGGTCTTCGACTTCGCCGACACCGTCTTCATCA
TCCTGGGAAAGAAGTGGAACCAGCTATCATTTCTGCATGTGTACCACCAC
GTGACCATCTTTTTGGTGTATTGGTTGAATTTGAATGCGGGATATGATGG
CGATATTTTCCTGACAGTCATTCTTAACGGGGCAATCCACACGGTAATGT
ACACTTACTACTTCCTCTCCATGCACACCAAGGACATTTGGTGGAAGAAG
TACTTGACACTGTTCCAGATTATTCAGTTCCTGACCATGAATGCTCAGGC
GATCTACTTGTTATGTGTGGGTTGCAAGGGGTTCTCGCCTCAGATTACGA
AGCTGTATCTTGGGTACATCCTGTCGCTGTTGGTGCTTTTCCTCAATTTT
TACTTCAAATCGTATTCTGGTGTGAAGCCCAATGGTAAGAAGCCGGTTTC
CAAGAAGGCTTAAGCTGCCATTCAGGCCTACCGTAACATGGCCGCCGCCC
TTCTTGCAGACTATCAAAAAACCTGCACGGACTTGTCCGCCGCCATTTTT
AAGTGGGCTGACCCTGCGGGCGCCATGGTCAAGGCGCCCACTCGCACCTG
GCCCTTGGCGGGTTTGGACGTGGCCCTGGCTATCGCGGCTTTCTACCTCA
TCATTGTCTTTGTGGGTTCGAACTACACCTTCCTCCCTTGCGAGCCGTTC
AATGCTACCAACCCACCAATCGCCCCTCTCCTGTGGCTCTTCTACGTCTC
CAAGGTCTTCGACTTCGCCGACACCGTCTTCATCATCCTGGGAAAGAAGT
GGAACCAGCTATCATTTCTGCATGTGTACCACCACGTGACCATCTTTTTG
GTGTATTGGTTGAATTTGAATGCGGGATATGATGGCGATATTTTCCTGAC
AGTCATTCTTAACGGGGCAATCCACACGGTAATGTACACTTACTACTTCC
TCTCCATGCACACCAAGGACATTTGGTGGAAGAAGTACTTGACACTGTTC
CAGATTATTCAGTTCCTGACCATGAATGCTCAGGCGATCTACTTGTTATG
TGTGGGTTGCAAGGGGTTCTCGCCTCAGATTACGAAGCTGTATCTTGGGT
ACATCCTGTCGCTGTTGGTGCTTTTCCTCAATTTTTACTTCAAATCGTAT
TCTGGTGTGAAGCCCAATGGTAAGAAGCCGGTTTCCAAGAAGGCTTAAGC
TGCCATTCAGGCCTACCGTAACATGGCCGCCGCCCTTCTTGCAGACTATC
AAAAAACCTGCACGGACTTGTCCGCCGCCATTTTTAAGTGGGCTGACCCT
GCGGGCGCCATGGTCAAGGCGCCCACTCGCACCTGGCCCTTGGCGGGTTT
GGACGTGGCCCTGGCTATCGCGGCTTTCTACCTCATCATTGTCTTTGTGG
GTTCG back to top
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