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Properties
| Property Name | Value |
|---|
| TranscriptId | 575235 |
| Track | FilteredModels2 |
| ProteinId | 575149 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1105787..1108899 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1054 ID=mRNA_1054|Name=jgi.p|Nanoce1779_2|575149|organism=Nannochloropsis oceanica|type=mRNA|length=2780bp
CAGGCAGCCCTCACTTGTCCCATCACCATAAAAAGCATCATGGCCGCCGC
CCTTCTTGCAGACTATCAAAAAACCTGCACGGACTTGTCCGCCGCCATTT
TTAAGTGGGCTGACCCTGCGGGCGCCATGGTCAAGGCGCCCACTCGCACC
TGGCCCTTGGCGGGTTTGGACGTGGCCCTGGCTATCGCGGCTTTCTACCT
CATCATTGTCTTTGTGGGTTCGGCCATGATGAAGAACGCACAGCCAGTAA
AATTGTACGGCTTGCAATTCTAACTACACCTTCCTCCCTTGCGAGCCGTT
CAATGCTACCAACCCACCAATCGCCCCTCTCCTGTGGCTCTTCTACGTCT
CCAAGGTCTTCGACTTCGCCGACACCGTCTTCATCATCCTGGGAAAGAAG
TGGAACCAGCTATCATTTCTGCATGTGTACCACCACGTGACCATCTTTTT
GGTGTATTGGTTGAATTTGAATGCGGGATATGATGGCGATATTTTCCTGA
CAGTCATTCTTAACGGGGCAATCCACACGGTAATGTACACTTACTACTTC
CTCTCCATGCACACCAAGGACATTTGGTGGAAGAAGTACTTGACACTGTT
CCAGATTATTCAGTTCCTGACCATGAATGCTCAGGCGATCTACTTGTTAT
GTGTGGGTTGCAAGGGGTTCTCGCCTCAGATTACGAAGCTGTATCTTGGG
TACATCCTGTCGCTGTTGGTGCTTTTCCTCAATTTTTACTTCAAATCGTA
TTCTGGTGTGAAGCCCAATGGTAAGAAGCCGGTTTCCAAGAAGGCTTAAC
CAGAGAATGGATATTGTAGGTTCGGTGGAAATGGAAGGGAGAGAATTGAT
GCGAGAGGAGAGCGAGGCCAATCGCACATGCGACGACGACGGAACGATAT
GGACAACAACATCAACAAACTGCAAGATGGTACACGTCTCTGAGAAGAGG
CGTAGTGGCTTCTATATGCGTACATATTTACAGATGACTTCAATCTCATA
CAAAAAAAGGAAGGGAAAAATGGGTAGAGTTTCAAGTCACTGGCTGGGGA
AATAGCTGGGGGAGTAAGAGTAAAAACTACACATTAAGGAAAGCCTTCCG
GCTGCAGGATGTTTCCCCAAAGGGTTCTTATACATGCAAAAGAAGAAGAA
GGACTTTTCGCACACGCAAATTCTCTTGCTCATAATCATTTGTTCGCAAA
AAACCTCCCCACCCACCGAACATAACTCGTTGAACGCCACGCACGCACTT
CATTCCACGCCATCCCCTTGGCCAGCACATGCCAGATACCTCACAGCGCA
CATACATAACGCCACGTAGACAAGCATGGGCAATGCACAAGGTGGTGGCA
AGGGAGGAGGCGGCGGGAGCGACATTCCCATTCCAGCAGGCGCAGGGGGA
GCAGCATCGTCATCAGGCGGCTGTCCGATCAAAGGCAAGTCCGCGTCTTC
CGCCATAACACCCGCTGCGTCCGCTGCTGCAGCGCCCGGATGCCCCGTCA
AAGGCAAGAGTGAGAGCAAGGCGATGACAGGAACGGTCTACAACGTGTAT
AGCCAGCCCATTGACCCCACAAACCAAATGCCTGCCAACGCCAACAACAA
ACCCGCCCCTGGCCAGATGGCGCCCCTGAGCACGGACCGGGTGTCCTCGC
GCATCCCCAAGGGTGGCACCGAGGCTGAGACATGGACATACCCCAGCCCA
CAAATGTTCTGGAACGCTCTGGTTCGGAAAGGTAAGGCGGAAGGGGCGAC
GGAGGAGGATATGGCGGTAGTGGTGGCTATTCACAACAACATGAACGAGA
ATACCTGGCGCAAGGTCTGTGAGTGGGAAGCGCTCCACGCCCCCCCTTCA
GCTGGAACCAGCGTTGCGGATGACAATGAGGCATCTGATCCCCGCCTTTC
TCGATTTTTGGGGAAGCCTGACGATATCTCCCCGAAGGCATGGTTTAAGA
GTTTGTTTGGTCACCCCCTGCCTTTCGATCGACACGATTGGGTCATTCAA
CGACCTGACGGAACCGAAGTTCGCTACATCATCGATTACTACCACGACGA
CGTCGCAGCGAAGGAAAACCGAATCCCTCAGGGGCTGCATGATGAGAAGG
CTGTGAAATCTATTTCTGTCGATGTGCGACCGGCCCTGGATTCGGTACAT
GCAATTATAGACCGAGGGGTGCGCATGCCCATCAGTCGCGCTGCGGGCAA
CTCGCCCTTTCAGCCATTGCCATTTTTTTGGGCCGGCAGCAAGGACATGA
AAGGTGGGCATAGTGATGGAACCAAAAATCAGATTGCCGAGGCGGCAGCT
GCGCCTGCTACGGCCTTTGCTGCAGTTGCTTCTGGGGCAGCGACGACGAA
AGTTGCCGCCGCCGCTGCTGCGCTTCCTGTCGCTCCAGCTGGTTGTGGAA
AGCAGGAAGAAATTTTAGACTTGACGGCATTATCGAAACAAGTACGTCTA
TCGTGCGCGGAGCATTTTGCAGCGTTGCAAAGATGTAAGGACGAGGCAGA
CTGCGCGAGGACCGCTGTGGCCTTGTCGTACTGTATGGGTAGTTTGTTAT
GTAAACCAGAAACGGCAGCCTTTGACCAAGCGATGGCGGCACCAGGGAGT
GGAGACAAGCATGATGCGGTGATTGAGGCGGCGTTTGGGAGGATGAGGAC
ATGTTTAGATGGGTTTGAGAGTAAGGCAGGGAAAGAGAGGGCGGAAGGGG
GACAAAGATAAGAGAGTATCAAGTGTGTGAAAAATCACCAAGAAATGTCC
ATAAACCCCCCTCAAATTAAATCTGTGTAT back to topprotein sequence of jgi.p|Nanoce1779_2|575149 >mRNA_1054-protein ID=mRNA_1054-protein|Name=jgi.p|Nanoce1779_2|575149|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MGNAQGGGKGGGGGSDIPIPAGAGGAASSSGGCPIKGKSASSAITPAASA
AAAPGCPVKGKSESKAMTGTVYNVYSQPIDPTNQMPANANNKPAPGQMAP
LSTDRVSSRIPKGGTEAETWTYPSPQMFWNALVRKGKAEGATEEDMAVVV
AIHNNMNENTWRKVCEWEALHAPPSAGTSVADDNEASDPRLSRFLGKPDD
ISPKAWFKSLFGHPLPFDRHDWVIQRPDGTEVRYIIDYYHDDVAAKENRI
PQGLHDEKAVKSISVDVRPALDSVHAIIDRGVRMPISRAAGNSPFQPLPF
FWAGSKDMKGGHSDGTKNQIAEAAAAPATAFAAVASGAATTKVAAAAAAL
PVAPAGCGKQEEILDLTALSKQVRLSCAEHFAALQRCKDEADCARTAVAL
SYCMGSLLCKPETAAFDQAMAAPGSGDKHDAVIEAAFGRMRTCLDGFESK
AGKERAEGGQR* back to topmRNA from alignment at scaffold_2:1105787..1108899- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1054 ID=mRNA_1054|Name=jgi.p|Nanoce1779_2|575149|organism=Nannochloropsis oceanica|type=mRNA|length=3113bp|location=Sequence derived from alignment at scaffold_2:1105787..1108899- (Nannochloropsis oceanica)
CAGGCAGCCCTCACTTGTCCCATCACCATAAAAAGCATCATGGCCGCCGC
CCTTCTTGCAGACTATCAAAAAACCTGCACGGACTTGTCCGCCGCCATTT
TTAAGTGGGCTGACCCTGCGGGCGCCATGGTCAAGGCGCCCACTCGCACC
TGGCCCTTGGCGGGTTTGGACGTGGCCCTGGCTATCGCGGCTTTCTACCT
CATCATTGTCTTTGTGGGTTCGGTACGTCTTTGGAATACCGTGTGTATAG
AAAGAGAGATTAGGCGTCGATAAATAGAGTTAGACTGCGTAGCGTATCCA
GAGCTGCAACATCTCAGCAGGCGCTTCCACCTCTCTTATCCCCTGTTCTC
CACCTATCTTCTACCTCCCCTCCCCAAAGGCCATGATGAAGAACGCACAG
CCAGTAAAATTGTACGGCTTGCAATTCTAAATCTCCAGGTCGCCTATGCT
AAATCGAGGCTGCCATTCAGGCCTACCGTAACGTAGGTCCTCCATCCACC
CTTTTCCTCCTTACCATCTCCAATTCCCGCCCCCTCCCTTTGTGTTTTAA
GTGAAGAAATACAAAATAGCAAAACTTACTTTCGCCTCTGCTAAAATCTA
ACAGAACTACACCTTCCTCCCTTGCGAGCCGTTCAATGCTACCAACCCAC
CAATCGCCCCTCTCCTGTGGCTCTTCTACGTCTCCAAGGTCTTCGACTTC
GCCGACACCGTCTTCATCATCCTGGGAAAGAAGTGGAACCAGCTATCATT
TCTGCATGTGTACCACCACGTGACCATCTTTTTGGTGTATTGGTTGAATT
TGAATGCGGGATATGATGGCGATATTTTCCTGACAGTCATTCTTAACGGG
GCAATCCACACGGTAATGTACACTTACTACTTCCTCTCCATGCACACCAA
GGACATTTGGTGGAAGAAGTACTTGACACTGTTCCAGATTATTCAGTTCC
TGACCATGAATGCTCAGGCGATCTACTTGTTATGTGTGGGTTGCAAGGGG
TTCTCGCCTCAGATTACGAAGCTGTATCTTGGGTACATCCTGTCGCTGTT
GGTGCTTTTCCTCAATTTTTACTTCAAATCGTATTCTGGTGTGAAGCCCA
ATGGTAAGAAGCCGGTTTCCAAGAAGGCTTAACCAGAGAATGGATATTGT
AGGTTCGGTGGAAATGGAAGGGAGAGAATTGATGCGAGAGGAGAGCGAGG
CCAATCGCACATGCGACGACGACGGAACGATATGGACAACAACATCAACA
AACTGCAAGATGGTACACGTCTCTGAGAAGAGGCGTAGTGGCTTCTATAT
GCGTACATATTTACAGATGACTTCAATCTCATACAAAAAAAGGAAGGGAA
AAATGGGTAGAGTTTCAAGTCACTGGCTGGGGAAATAGCTGGGGGAGTAA
GAGTAAAAACTACACATTAAGGAAAGCCTTCCGGCTGCAGGATGTTTCCC
CAAAGGGTTCTTATACATGCAAAAGAAGAAGAAGGACTTTTCGCACACGC
AAATTCTCTTGCTCATAATCATTTGTTCGCAAAAAACCTCCCCACCCACC
GAACATAACTCGTTGAACGCCACGCACGCACTTCATTCCACGCCATCCCC
TTGGCCAGCACATGCCAGATACCTCACAGCGCACATACATAACGCCACGT
AGACAAGCATGGGCAATGCACAAGGTGGTGGCAAGGGAGGAGGCGGCGGG
AGCGACATTCCCATTCCAGCAGGCGCAGGGGGAGCAGCATCGTCATCAGG
CGGCTGTCCGATCAAAGGCAAGTCCGCGTCTTCCGCCATAACACCCGCTG
CGTCCGCTGCTGCAGCGCCCGGATGCCCCGTCAAAGGCAAGAGTGAGAGC
AAGGCGATGACAGGAACGGTCTACAACGTGTATAGCCAGCCCATTGACCC
CACAAACCAAATGCCTGCCAACGCCAACAACAAACCCGCCCCTGGCCAGA
TGGCGCCCCTGAGCACGGACCGGGTGTCCTCGCGCATCCCCAAGGGTGGC
ACCGAGGCTGAGACATGGACATACCCCAGCCCACAAATGTTCTGGAACGC
TCTGGTTCGGAAAGGTAAGGCGGAAGGGGCGACGGAGGAGGATATGGCGG
TAGTGGTGGCTATTCACAACAACATGAACGAGAATACCTGGCGCAAGGTC
TGTGAGTGGGAAGCGCTCCACGCCCCCCCTTCAGCTGGAACCAGCGTTGC
GGATGACAATGAGGCATCTGATCCCCGCCTTTCTCGATTTTTGGGGAAGC
CTGACGATATCTCCCCGAAGGCATGGTTTAAGAGTTTGTTTGGTCACCCC
CTGCCTTTCGATCGACACGATTGGGTCATTCAACGACCTGACGGAACCGA
AGTTCGCTACATCATCGATTACTACCACGACGACGTCGCAGCGAAGGAAA
ACCGAATCCCTCAGGGGCTGCATGATGAGAAGGCTGTGAAATCTATTTCT
GTCGATGTGCGACCGGCCCTGGATTCGGTACATGCAATTATAGACCGAGG
GGTGCGCATGCCCATCAGTCGCGCTGCGGGCAACTCGCCCTTTCAGCCAT
TGCCATTTTTTTGGGCCGGCAGCAAGGACATGAAAGGTGGGCATAGTGAT
GGAACCAAAAATCAGATTGCCGAGGCGGCAGCTGCGCCTGCTACGGCCTT
TGCTGCAGTTGCTTCTGGGGCAGCGACGACGAAAGTTGCCGCCGCCGCTG
CTGCGCTTCCTGTCGCTCCAGCTGGTTGTGGAAAGCAGGAAGAAATTTTA
GACTTGACGGCATTATCGAAACAAGTACGTCTATCGTGCGCGGAGCATTT
TGCAGCGTTGCAAAGATGTAAGGACGAGGCAGACTGCGCGAGGACCGCTG
TGGCCTTGTCGTACTGTATGGGTAGTTTGTTATGTAAACCAGAAACGGCA
GCCTTTGACCAAGCGATGGCGGCACCAGGGAGTGGAGACAAGCATGATGC
GGTGATTGAGGCGGCGTTTGGGAGGATGAGGACATGTTTAGATGGGTTTG
AGAGTAAGGCAGGGAAAGAGAGGGCGGAAGGGGGACAAAGATAAGAGAGT
ATCAAGTGTGTGAAAAATCACCAAGAAATGTCCATAAACCCCCCTCAAAT
TAAATCTGTGTAT back to topCoding sequence (CDS) from alignment at scaffold_2:1105787..1108899- >mRNA_1054 ID=mRNA_1054|Name=jgi.p|Nanoce1779_2|575149|organism=Nannochloropsis oceanica|type=CDS|length=1386bp|location=Sequence derived from alignment at scaffold_2:1105787..1108899- (Nannochloropsis oceanica)
ATGGGCAATGCACAAGGTGGTGGCAAGGGAGGAGGCGGCGGGAGCGACAT
TCCCATTCCAGCAGGCGCAGGGGGAGCAGCATCGTCATCAGGCGGCTGTC
CGATCAAAGGCAAGTCCGCGTCTTCCGCCATAACACCCGCTGCGTCCGCT
GCTGCAGCGCCCGGATGCCCCGTCAAAGGCAAGAGTGAGAGCAAGGCGAT
GACAGGAACGGTCTACAACGTGTATAGCCAGCCCATTGACCCCACAAACC
AAATGCCTGCCAACGCCAACAACAAACCCGCCCCTGGCCAGATGGCGCCC
CTGAGCACGGACCGGGTGTCCTCGCGCATCCCCAAGGGTGGCACCGAGGC
TGAGACATGGACATACCCCAGCCCACAAATGTTCTGGAACGCTCTGGTTC
GGAAAGGTAAGGCGGAAGGGGCGACGGAGGAGGATATGGCGGTAGTGGTG
GCTATTCACAACAACATGAACGAGAATACCTGGCGCAAGGTCTGTGAGTG
GGAAGCGCTCCACGCCCCCCCTTCAGCTGGAACCAGCGTTGCGGATGACA
ATGAGGCATCTGATCCCCGCCTTTCTCGATTTTTGGGGAAGCCTGACGAT
ATCTCCCCGAAGGCATGGTTTAAGAGTTTGTTTGGTCACCCCCTGCCTTT
CGATCGACACGATTGGGTCATTCAACGACCTGACGGAACCGAAGTTCGCT
ACATCATCGATTACTACCACGACGACGTCGCAGCGAAGGAAAACCGAATC
CCTCAGGGGCTGCATGATGAGAAGGCTGTGAAATCTATTTCTGTCGATGT
GCGACCGGCCCTGGATTCGGTACATGCAATTATAGACCGAGGGGTGCGCA
TGCCCATCAGTCGCGCTGCGGGCAACTCGCCCTTTCAGCCATTGCCATTT
TTTTGGGCCGGCAGCAAGGACATGAAAGGTGGGCATAGTGATGGAACCAA
AAATCAGATTGCCGAGGCGGCAGCTGCGCCTGCTACGGCCTTTGCTGCAG
TTGCTTCTGGGGCAGCGACGACGAAAGTTGCCGCCGCCGCTGCTGCGCTT
CCTGTCGCTCCAGCTGGTTGTGGAAAGCAGGAAGAAATTTTAGACTTGAC
GGCATTATCGAAACAAGTACGTCTATCGTGCGCGGAGCATTTTGCAGCGT
TGCAAAGATGTAAGGACGAGGCAGACTGCGCGAGGACCGCTGTGGCCTTG
TCGTACTGTATGGGTAGTTTGTTATGTAAACCAGAAACGGCAGCCTTTGA
CCAAGCGATGGCGGCACCAGGGAGTGGAGACAAGCATGATGCGGTGATTG
AGGCGGCGTTTGGGAGGATGAGGACATGTTTAGATGGGTTTGAGAGTAAG
GCAGGGAAAGAGAGGGCGGAAGGGGGACAAAGATAA back to top
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