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Properties
| Property Name | Value |
|---|
| TranscriptId | 575231 |
| Track | FilteredModels2 |
| ProteinId | 575145 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1104124..1105419 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1053 ID=mRNA_1053|Name=jgi.p|Nanoce1779_2|575145|organism=Nannochloropsis oceanica|type=mRNA|length=1296bp
CAGGGATCCTTTCACCCATGCCGCGGCGTCAGATGTTGGCGGTGGCAGCC
GCAGCCTCGTGCTGTTGCCTGGCAGCGGCCTTCGTGCAGCAGTCTTCCTT
GCCCTCCTTGCACTTGTCGACAGGCCGGGTCGCGGACCACTTCTCCATGC
CAGTCCGCTCAAGAGTAGCAGCATTTCCTGTACGCATAACGAAGTTACCG
ACAATGATAAACTCGAACTTCGATAGCTTGCAGCCCGGGATCACAGCTCC
ATCGTCTTCCTCCTCTACCTTTGCCCCTCCTGCCTCGGGCGTTGTCTCCG
CCAAAGTCTCGACACCCAGCGCCGCCACGCCAAAGAAAAAGGGAAGCTTG
CAGACGAGGATCCTCACGGGGATAGTGCTTGGAGCATTGGCGACGTATTG
GGTATTTGGTGGAAAGTGGGTCTTTATGTCGGGCTTTCTTGTGCAAGCTA
TCTTGGCCCAACGCGAGTACTACAGGATGTGTTCCAAGGCCGGGGCGACG
CCTGCCCGTCGGATCAGCTTTGTCAGTACCTTGCTTATGTACATCATTGC
GTGTCAAATACCCGCATATCACGAGATGGTCTTGCCTTTGGGAGGGACCG
CAGTCATGATTTGGTTGCTGATGATGCGGAAGGCCCCGGCAAAAATTACG
GAGGTCTCCACAACCATTCTGGGGATGTTTTACATTGGTTATCTCCCGTC
GTTTTGGATCCGTTTGCGTGCCTTAGGCGATGTAATGCCCAGCACATTTG
CCACAATTTTGACGAAATTTTGGCCGGCGTGGATTCCCTTGCATTTGATT
CCTGACCCGCAGATGTGGACGGAAGGAGCGATAGTGATTTGGTGGACATA
CCTAACAATTATTTGTTCTGATATTGGGGCGTTTGCCACGGGAAAGACGT
TTGGGAGGAATAAATTGTCGACCGTGAGTACGGCTGCGGGACAAACATCA
CCGAATAAGACGGTGGAGGGCGTGCTGGGGGGGTTTGTGAGTGCCACGGC
CGTTGCAACGATCATGTCGAGGTTGCTTAATTGGCCTTTATGGTGGCTGA
GTGGTCCGGCGTACGGGTTAATGCTGGGGGTTGTGGCGTTGGTAGGAGAT
TTGACTGCGTCGATGTTCAAGCGGGACGCGGGGATGAAAGATTCGGGTGG
GCTATTACCCGGTCACGGGGGCATTTTGGATCGCATCGACTCGTTCATGT
TCACGGGTCCTTGTGCGTTTTTGTTTGTGAAGGTAGGCTTACCGGTGGCG
AGGAGGATTGCGGTGACCAAGGGGTGGGGTGCCTAGGAGAGTATTT back to topprotein sequence of jgi.p|Nanoce1779_2|575145 >mRNA_1053-protein ID=mRNA_1053-protein|Name=jgi.p|Nanoce1779_2|575145|organism=Nannochloropsis oceanica|type=polypeptide|length=423bp
MPRRQMLAVAAAASCCCLAAAFVQQSSLPSLHLSTGRVADHFSMPVRSRV
AAFPVRITKLPTMINSNFDSLQPGITAPSSSSSTFAPPASGVVSAKVSTP
SAATPKKKGSLQTRILTGIVLGALATYWVFGGKWVFMSGFLVQAILAQRE
YYRMCSKAGATPARRISFVSTLLMYIIACQIPAYHEMVLPLGGTAVMIWL
LMMRKAPAKITEVSTTILGMFYIGYLPSFWIRLRALGDVMPSTFATILTK
FWPAWIPLHLIPDPQMWTEGAIVIWWTYLTIICSDIGAFATGKTFGRNKL
STVSTAAGQTSPNKTVEGVLGGFVSATAVATIMSRLLNWPLWWLSGPAYG
LMLGVVALVGDLTASMFKRDAGMKDSGGLLPGHGGILDRIDSFMFTGPCA
FLFVKVGLPVARRIAVTKGWGA* back to topmRNA from alignment at scaffold_2:1104124..1105419+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1053 ID=mRNA_1053|Name=jgi.p|Nanoce1779_2|575145|organism=Nannochloropsis oceanica|type=mRNA|length=1296bp|location=Sequence derived from alignment at scaffold_2:1104124..1105419+ (Nannochloropsis oceanica)
CAGGGATCCTTTCACCCATGCCGCGGCGTCAGATGTTGGCGGTGGCAGCC
GCAGCCTCGTGCTGTTGCCTGGCAGCGGCCTTCGTGCAGCAGTCTTCCTT
GCCCTCCTTGCACTTGTCGACAGGCCGGGTCGCGGACCACTTCTCCATGC
CAGTCCGCTCAAGAGTAGCAGCATTTCCTGTACGCATAACGAAGTTACCG
ACAATGATAAACTCGAACTTCGATAGCTTGCAGCCCGGGATCACAGCTCC
ATCGTCTTCCTCCTCTACCTTTGCCCCTCCTGCCTCGGGCGTTGTCTCCG
CCAAAGTCTCGACACCCAGCGCCGCCACGCCAAAGAAAAAGGGAAGCTTG
CAGACGAGGATCCTCACGGGGATAGTGCTTGGAGCATTGGCGACGTATTG
GGTATTTGGTGGAAAGTGGGTCTTTATGTCGGGCTTTCTTGTGCAAGCTA
TCTTGGCCCAACGCGAGTACTACAGGATGTGTTCCAAGGCCGGGGCGACG
CCTGCCCGTCGGATCAGCTTTGTCAGTACCTTGCTTATGTACATCATTGC
GTGTCAAATACCCGCATATCACGAGATGGTCTTGCCTTTGGGAGGGACCG
CAGTCATGATTTGGTTGCTGATGATGCGGAAGGCCCCGGCAAAAATTACG
GAGGTCTCCACAACCATTCTGGGGATGTTTTACATTGGTTATCTCCCGTC
GTTTTGGATCCGTTTGCGTGCCTTAGGCGATGTAATGCCCAGCACATTTG
CCACAATTTTGACGAAATTTTGGCCGGCGTGGATTCCCTTGCATTTGATT
CCTGACCCGCAGATGTGGACGGAAGGAGCGATAGTGATTTGGTGGACATA
CCTAACAATTATTTGTTCTGATATTGGGGCGTTTGCCACGGGAAAGACGT
TTGGGAGGAATAAATTGTCGACCGTGAGTACGGCTGCGGGACAAACATCA
CCGAATAAGACGGTGGAGGGCGTGCTGGGGGGGTTTGTGAGTGCCACGGC
CGTTGCAACGATCATGTCGAGGTTGCTTAATTGGCCTTTATGGTGGCTGA
GTGGTCCGGCGTACGGGTTAATGCTGGGGGTTGTGGCGTTGGTAGGAGAT
TTGACTGCGTCGATGTTCAAGCGGGACGCGGGGATGAAAGATTCGGGTGG
GCTATTACCCGGTCACGGGGGCATTTTGGATCGCATCGACTCGTTCATGT
TCACGGGTCCTTGTGCGTTTTTGTTTGTGAAGGTAGGCTTACCGGTGGCG
AGGAGGATTGCGGTGACCAAGGGGTGGGGTGCCTAGGAGAGTATTT back to topCoding sequence (CDS) from alignment at scaffold_2:1104124..1105419+ >mRNA_1053 ID=mRNA_1053|Name=jgi.p|Nanoce1779_2|575145|organism=Nannochloropsis oceanica|type=CDS|length=1269bp|location=Sequence derived from alignment at scaffold_2:1104124..1105419+ (Nannochloropsis oceanica)
ATGCCGCGGCGTCAGATGTTGGCGGTGGCAGCCGCAGCCTCGTGCTGTTG
CCTGGCAGCGGCCTTCGTGCAGCAGTCTTCCTTGCCCTCCTTGCACTTGT
CGACAGGCCGGGTCGCGGACCACTTCTCCATGCCAGTCCGCTCAAGAGTA
GCAGCATTTCCTGTACGCATAACGAAGTTACCGACAATGATAAACTCGAA
CTTCGATAGCTTGCAGCCCGGGATCACAGCTCCATCGTCTTCCTCCTCTA
CCTTTGCCCCTCCTGCCTCGGGCGTTGTCTCCGCCAAAGTCTCGACACCC
AGCGCCGCCACGCCAAAGAAAAAGGGAAGCTTGCAGACGAGGATCCTCAC
GGGGATAGTGCTTGGAGCATTGGCGACGTATTGGGTATTTGGTGGAAAGT
GGGTCTTTATGTCGGGCTTTCTTGTGCAAGCTATCTTGGCCCAACGCGAG
TACTACAGGATGTGTTCCAAGGCCGGGGCGACGCCTGCCCGTCGGATCAG
CTTTGTCAGTACCTTGCTTATGTACATCATTGCGTGTCAAATACCCGCAT
ATCACGAGATGGTCTTGCCTTTGGGAGGGACCGCAGTCATGATTTGGTTG
CTGATGATGCGGAAGGCCCCGGCAAAAATTACGGAGGTCTCCACAACCAT
TCTGGGGATGTTTTACATTGGTTATCTCCCGTCGTTTTGGATCCGTTTGC
GTGCCTTAGGCGATGTAATGCCCAGCACATTTGCCACAATTTTGACGAAA
TTTTGGCCGGCGTGGATTCCCTTGCATTTGATTCCTGACCCGCAGATGTG
GACGGAAGGAGCGATAGTGATTTGGTGGACATACCTAACAATTATTTGTT
CTGATATTGGGGCGTTTGCCACGGGAAAGACGTTTGGGAGGAATAAATTG
TCGACCGTGAGTACGGCTGCGGGACAAACATCACCGAATAAGACGGTGGA
GGGCGTGCTGGGGGGGTTTGTGAGTGCCACGGCCGTTGCAACGATCATGT
CGAGGTTGCTTAATTGGCCTTTATGGTGGCTGAGTGGTCCGGCGTACGGG
TTAATGCTGGGGGTTGTGGCGTTGGTAGGAGATTTGACTGCGTCGATGTT
CAAGCGGGACGCGGGGATGAAAGATTCGGGTGGGCTATTACCCGGTCACG
GGGGCATTTTGGATCGCATCGACTCGTTCATGTTCACGGGTCCTTGTGCG
TTTTTGTTTGTGAAGGTAGGCTTACCGGTGGCGAGGAGGATTGCGGTGAC
CAAGGGGTGGGGTGCCTAG back to top
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