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Properties
| Property Name | Value |
|---|
| TranscriptId | 643308 |
| Track | FilteredModels2 |
| ProteinId | 643222 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_52 | supercontig | scaffold_52:34878..36538 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10481 ID=mRNA_10481|Name=jgi.p|Nanoce1779_2|643222|organism=Nannochloropsis oceanica|type=mRNA|length=570bp
ATGGGCGCTACGAGATCAAAAGGTGCCACGGGTGTAAGGGCCTCTACCGG
TGCTATGGGTACCACTGATGCCACGGATGCTACGAGGGCACTTATGCAGC
AGGTGTTACAGGTTATTACAGGCGATATCGGGTTTATGGGTGCCAAGGTG
GCTACCGGTTTGACAGATGCCACAAGCGCCACAGAAGCTACCGATGATAC
GAGAGCAACTAGAGCCATCGATGCTACGGGGACCATCGGGGCAATAGGTA
CCACGGGTACCGCGGGGTCTAAGGAGGGTCACGGACTCCAGGGACTGGAA
ACACGTGGTGGCGTGGGGATCGTGGATGGAGGTTCCGTGGGGATCGTGGA
CGGTGGTTTCATGGGGATCGGTGTTCGTGTCATGCAGAAATACTTGCTGG
CCCTGATTTTGTCTTTCTCATTCAAACGCGCTTTCCCCGGCAACATCATG
TGTCGCGCCCTTTTTCTGCTTGCCTTTGGCATCACACTCGCCCTCGCGGC
AGCTCAGCCAACGTTGACCCTAACCTCCATCAAGGCTGTCGACGTGGTCA
GGGCGAGCAAAGACCAATGA back to topprotein sequence of jgi.p|Nanoce1779_2|643222 >mRNA_10481-protein ID=mRNA_10481-protein|Name=jgi.p|Nanoce1779_2|643222|organism=Nannochloropsis oceanica|type=polypeptide|length=190bp
MGATRSKGATGVRASTGAMGTTDATDATRALMQQVLQVITGDIGFMGAKV
ATGLTDATSATEATDDTRATRAIDATGTIGAIGTTGTAGSKEGHGLQGLE
TRGGVGIVDGGSVGIVDGGFMGIGVRVMQKYLLALILSFSFKRAFPGNIM
CRALFLLAFGITLALAAAQPTLTLTSIKAVDVVRASKDQ* back to topmRNA from alignment at scaffold_52:34878..36538+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10481 ID=mRNA_10481|Name=jgi.p|Nanoce1779_2|643222|organism=Nannochloropsis oceanica|type=mRNA|length=1661bp|location=Sequence derived from alignment at scaffold_52:34878..36538+ (Nannochloropsis oceanica)
ATGGGCGCTACGAGATCAAAAGGTGCCACGGGTGTAAGGGCCTCTACCGG
TGCTATGGGTACCACTGATGCCACGGATGCTACGAGGGCACTTATGCAGC
AGGTGTTACAGGTTATTACAGGCGATATCGGGTTTATGGGTGCCAAGGTG
GCTACCGGTTTGACAGATGCCACAAGCGCCACAGAAGCTACCGATGATAC
GAGAGCAACTAGAGCCATCGATGCTACGGGGACCATCGGGGCAATAGGTA
CCACGGGTACCGCGGGGTCTAAGGAGGGTCACGGACTCCAGGGACTGGAA
ACGTGAAAATATTGTGTATGTGCATCAGATCTAAACCTGAACTTGCTCTT
TGCTTTTGGGAGGACTTTCGATTGATGCTCTTTGCTTTGAGAGGACTTTG
GGATCGATTTCCACACACATACATTTTTGTCTGTCTGTCTATTGCGCGCT
CAAATCGATGTTTTTCCGCATTCTTCTCTCCCCACAAACGACCAACGCAC
TTGCATGTTTAGCAACATATGATGATGAAGAAAAATACAATGTACAAGAC
TCCATAGTAGTCTTTGTGACGTCATCCAGTGTTTGGTGTGGTTTTGAGCT
TCCAGTCCCTCAATTTAGAGTGCTCCGCGGCCCGCGGGTCCACTAATAAT
CACTCCCCCTCCAGCTCCCTTCGAGTCAATCTCCTCTTCCCTCAACCCCT
CACAAATGAACTAAGCATTATAAGAGCGCACACCCATTTGCTGACCATGC
ACTGAGTAGTGTAGCTGCATTCTTTGCCCTTATCTATGTTTATTGAGGGA
TGGAGAGGAGGGAGGAGGGTGATATTGATGATGACGCATTCAAATTATGC
GCATTGGCTATGGGCCTTCACAAGACACAACACACGCCTTGCATCTTTCC
CCTCGCGTAATCCAGACGTGGTGGCGTGGGGATCGTGGATGGAGGTTCCG
TGGGGATCGTGGACGGTGGTTTCATGGGGATCGGTGTTCGTGTCATGCAG
AAATACTTGCTGGCCCTGATTTTGTCTTTCTCATTGTACTTCGTATTGGT
AGCAGAGAGATCGGCAAGGCCACCAACAGCAAGGATAGAGGTCAGAGGCG
TCGATACCATTGTGTTGCACACCTGACAGCGGAATCCACCCAACACACTG
TAGTGGGAAGATGCACTACTGGTCGTGTTATGTTTTTTCTGCACCTCAAT
CTTGGCATCTTTGGGGACCTTCTGAATCCTTTTCAGTGTCATACGAGCAT
CCCTAGCCTTGCAAATGACTCCCTCATCATTGTTGAGCAGATTTCAATCA
GCCAGCTCGAAGGCCACGGTATTCAAAGTAATATAGTTGAGTTTTCAAGG
GCCACAGTCATCCATGGCATCACCTTGTTCTTCATTGTACTTACTCAGTA
AACTCTGATCGCTGCACATATTTCTGATTAATGTCTAATTTTCTAGGAAA
CTGCCGATAGATAGGCATACAAACCCTTCGTCTACCTCTCATCTACACCT
CACACTATTACAGCAAACGCGCTTTCCCCGGCAACATCATGTGTCGCGCC
CTTTTTCTGCTTGCCTTTGGCATCACACTCGCCCTCGCGGCAGCTCAGCC
AACGTTGACCCTAACCTCCATCAAGGCTGTCGACGTGGTCAGGGCGAGCA
AAGACCAATGA back to topCoding sequence (CDS) from alignment at scaffold_52:34878..36538+ >mRNA_10481 ID=mRNA_10481|Name=jgi.p|Nanoce1779_2|643222|organism=Nannochloropsis oceanica|type=CDS|length=1710bp|location=Sequence derived from alignment at scaffold_52:34878..36538+ (Nannochloropsis oceanica)
ATGGGCGCTACGAGATCAAAAGGTGCCACGGGTGTAAGGGCCTCTACCGG
TGCTATGGGTACCACTGATGCCACGGATGCTACGAGGGCACTTATGCAGC
AGGTGTTACAGGTTATTACAGGCGATATCGGGTTTATGGGTGCCAAGGTG
GCTACCGGTTTGACAGATGCCACAAGCGCCACAGAAGCTACCGATGATAC
GAGAGCAACTAGAGCCATCGATGCTACGGGGACCATCGGGGCAATAGGTA
CCACGGGTACCGCGGGGTCTAAGGAGGGTCACGGACTCCAGGGACTGGAA
ACACGTGGTGGCGTGGGGATCGTGGATGGAGGTTCCGTGGGGATCGTGGA
CGGTGGTTTCATGGGGATCGGTGTTCGTGTCATGCAGAAATACTTGCTGG
CCCTGATTTTGTCTTTCTCATTCAAACGCGCTTTCCCCGGCAACATCATG
TGTCGCGCCCTTTTTCTGCTTGCCTTTGGCATCACACTCGCCCTCGCGGC
AGCTCAGCCAACGTTGACCCTAACCTCCATCAAGGCTGTCGACGTGGTCA
GGGCGAGCAAAGACCAATGAATGGGCGCTACGAGATCAAAAGGTGCCACG
GGTGTAAGGGCCTCTACCGGTGCTATGGGTACCACTGATGCCACGGATGC
TACGAGGGCACTTATGCAGCAGGTGTTACAGGTTATTACAGGCGATATCG
GGTTTATGGGTGCCAAGGTGGCTACCGGTTTGACAGATGCCACAAGCGCC
ACAGAAGCTACCGATGATACGAGAGCAACTAGAGCCATCGATGCTACGGG
GACCATCGGGGCAATAGGTACCACGGGTACCGCGGGGTCTAAGGAGGGTC
ACGGACTCCAGGGACTGGAAACACGTGGTGGCGTGGGGATCGTGGATGGA
GGTTCCGTGGGGATCGTGGACGGTGGTTTCATGGGGATCGGTGTTCGTGT
CATGCAGAAATACTTGCTGGCCCTGATTTTGTCTTTCTCATTCAAACGCG
CTTTCCCCGGCAACATCATGTGTCGCGCCCTTTTTCTGCTTGCCTTTGGC
ATCACACTCGCCCTCGCGGCAGCTCAGCCAACGTTGACCCTAACCTCCAT
CAAGGCTGTCGACGTGGTCAGGGCGAGCAAAGACCAATGAATGGGCGCTA
CGAGATCAAAAGGTGCCACGGGTGTAAGGGCCTCTACCGGTGCTATGGGT
ACCACTGATGCCACGGATGCTACGAGGGCACTTATGCAGCAGGTGTTACA
GGTTATTACAGGCGATATCGGGTTTATGGGTGCCAAGGTGGCTACCGGTT
TGACAGATGCCACAAGCGCCACAGAAGCTACCGATGATACGAGAGCAACT
AGAGCCATCGATGCTACGGGGACCATCGGGGCAATAGGTACCACGGGTAC
CGCGGGGTCTAAGGAGGGTCACGGACTCCAGGGACTGGAAACACGTGGTG
GCGTGGGGATCGTGGATGGAGGTTCCGTGGGGATCGTGGACGGTGGTTTC
ATGGGGATCGGTGTTCGTGTCATGCAGAAATACTTGCTGGCCCTGATTTT
GTCTTTCTCATTCAAACGCGCTTTCCCCGGCAACATCATGTGTCGCGCCC
TTTTTCTGCTTGCCTTTGGCATCACACTCGCCCTCGCGGCAGCTCAGCCA
ACGTTGACCCTAACCTCCATCAAGGCTGTCGACGTGGTCAGGGCGAGCAA
AGACCAATGA back to top
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