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Properties
| Property Name | Value |
|---|
| TranscriptId | 611716 |
| Track | FilteredModels2 |
| ProteinId | 611630 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_57 | supercontig | scaffold_57:99636..101211 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10470 ID=mRNA_10470|Name=jgi.p|Nanoce1779_2|611630|organism=Nannochloropsis oceanica|type=mRNA|length=1555bp
AGGATGCGGTGCTGAGAGGAGAGGTGGAGAAGAAGGATGCGGTGCTGAGA
GGAGAGGTGGAGAAGAAGGATGCGGTGCTGAGAGGAGAGATTGAGAAGAA
GGATGTAATGCGGGGAAAATTTGAAATTGATAGAGGAAATGGAAAAGAAG
GATGCGTTGCGGGCGGGGAGGTGGACAGACGGATCTTAGACCTCTTGATG
CGGGGGGGATTATGATCGGGCTCGGATACTGTAGGAGGAGCGAGCGGACG
GGCACCTGACTGGTCTGCCCTCTTCTCCTCCCGCTCCTTCTTCTTCCACC
CAGGGGAATCTTTCATGCTTAGAATGGTCTGCAGCCTCATTCCCTCCATA
ACGTCTATCTCTGACTTTCACCGACGTGACAGAGCGCCAGAGAGAAGAAG
ACTGAGACCGATGCGAGAAAAGAAGAGAGGGAGGAAAGGGTACGTAAATA
GAGGACATAGAATGCAGAGGCTGCTGGTACAAAGACGTTTGTGGAAAGTG
TAATGTTGTGACTATAAGTAGGCTTTGGGGTCTTCAGCGCTAAAACCCCA
ATTGGAAATGGGTGCTCTATCGGTGCTGGGATGGGTCCTGAGTTTATCTC
AATTATATCATCTTTCCGTCTGCACTTCCTACCCCTCCCCCTACCGCATG
TCTTATCTCTTGCTTGGATATATCATGATGACCGGTATCCTTTTTTTTCT
GTGTGCTTGTGTGCCATGTTTCGTCCTTTCCATTTCTTCTTCCCCTTCTA
TCTTCTCCTTCTCTTCTCATATTCTTCATGCGATCTACATCGATACCCCT
TCTTTCTCTCCCCAGACGAAATATCGCTCGGTGTGTGTCGATCGCATGCT
CGCGTCTTTACACCGTCGTTGTCACGTGAGGGACGCGACCAATGGATTTC
TTGCGGTACCATTTCACCACGAGTCGCAATTTGACCTGGCAATGTTGAAA
GCGTTGGTAGTCCATTCCAAGCCGGGACGGTGCAAAAAAACAATGATGAC
TAAGAAGATCCTTTTGAATCGCTGGTGTAGTAGCATAAGTATGTATGTAT
GGTGGTGCATGTGATTGAGGAGGTGTTTATGTGGTGAGATGGTGTCTCAT
GTGGCATTGATGAGGGGGGAAGGGCATCCAAAGCGACAGGAAGCTGGCTG
GTATGTCGCTGTGGTATAGCTGGGAGAAGGCGGATAGCGTTTCCTATCAC
TGGTGTAGTAGCATAAGTATGTGTGTATGGTGGTCGGTGTGATTGAGGAC
GTATTCATGTGCGGTTTGGGGAAATGCGTGTAAACAAGTGGTGTACGGGC
TGCTTGACTGGACAGGAAAGGGATACACGAGGGCTGTATTCATGGTGTGG
ATAGGAAAGGGATACACAAGGGCTGTATTCATGTTGAGCCCAATGGCTTT
GGCCCTCTCAGGTGTGGTTAAGGGAAAGAGGGAACAAAGGGAAAGGAGGG
TTAGGTAATAGGTTGTGTATGTTTCTCTTTAGATGTAAGATTGATGTTGT
GAATAGAATAATGAGTCCCAGGCTGAAGTATAAGCAGTGGTTCATGAAAG
TTGAC back to topprotein sequence of jgi.p|Nanoce1779_2|611630 >mRNA_10470-protein ID=mRNA_10470-protein|Name=jgi.p|Nanoce1779_2|611630|organism=Nannochloropsis oceanica|type=polypeptide|length=169bp
MGALSVLGWVLSLSQLYHLSVCTSYPSPYRMSYLLLGYIMMTGILFFLCA
CVPCFVLSISSSPSIFSFSSHILHAIYIDTPSFSPQTKYRSVCVDRMLAS
LHRRCHVRDATNGFLAVPFHHESQFDLAMLKALVVHSKPGRCKKTMMTKK
ILLNRWCSSISMYVWWCM* back to topmRNA from alignment at scaffold_57:99636..101211+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10470 ID=mRNA_10470|Name=jgi.p|Nanoce1779_2|611630|organism=Nannochloropsis oceanica|type=mRNA|length=1576bp|location=Sequence derived from alignment at scaffold_57:99636..101211+ (Nannochloropsis oceanica)
AGGATGCGGTGCTGAGAGGAGAGGTGGAGAAGAAGGATGCAGAACTAGAA
AGGAAGGATGCGGTGCTGAGAGGAGAGGTGGAGAAGAAGGATGCGGTGCT
GAGAGGAGAGATTGAGAAGAAGGATGTAATGCGGGGAAAATTTGAAATTG
ATAGAGGAAATGGAAAAGAAGGATGCGTTGCGGGCGGGGAGGTGGACAGA
CGGATCTTAGACCTCTTGATGCGGGGGGGATTATGATCGGGCTCGGATAC
TGTAGGAGGAGCGAGCGGACGGGCACCTGACTGGTCTGCCCTCTTCTCCT
CCCGCTCCTTCTTCTTCCACCCAGGGGAATCTTTCATGCTTAGAATGGTC
TGCAGCCTCATTCCCTCCATAACGTCTATCTCTGACTTTCACCGACGTGA
CAGAGCGCCAGAGAGAAGAAGACTGAGACCGATGCGAGAAAAGAAGAGAG
GGAGGAAAGGGTACGTAAATAGAGGACATAGAATGCAGAGGCTGCTGGTA
CAAAGACGTTTGTGGAAAGTGTAATGTTGTGACTATAAGTAGGCTTTGGG
GTCTTCAGCGCTAAAACCCCAATTGGAAATGGGTGCTCTATCGGTGCTGG
GATGGGTCCTGAGTTTATCTCAATTATATCATCTTTCCGTCTGCACTTCC
TACCCCTCCCCCTACCGCATGTCTTATCTCTTGCTTGGATATATCATGAT
GACCGGTATCCTTTTTTTTCTGTGTGCTTGTGTGCCATGTTTCGTCCTTT
CCATTTCTTCTTCCCCTTCTATCTTCTCCTTCTCTTCTCATATTCTTCAT
GCGATCTACATCGATACCCCTTCTTTCTCTCCCCAGACGAAATATCGCTC
GGTGTGTGTCGATCGCATGCTCGCGTCTTTACACCGTCGTTGTCACGTGA
GGGACGCGACCAATGGATTTCTTGCGGTACCATTTCACCACGAGTCGCAA
TTTGACCTGGCAATGTTGAAAGCGTTGGTAGTCCATTCCAAGCCGGGACG
GTGCAAAAAAACAATGATGACTAAGAAGATCCTTTTGAATCGCTGGTGTA
GTAGCATAAGTATGTATGTATGGTGGTGCATGTGATTGAGGAGGTGTTTA
TGTGGTGAGATGGTGTCTCATGTGGCATTGATGAGGGGGGAAGGGCATCC
AAAGCGACAGGAAGCTGGCTGGTATGTCGCTGTGGTATAGCTGGGAGAAG
GCGGATAGCGTTTCCTATCACTGGTGTAGTAGCATAAGTATGTGTGTATG
GTGGTCGGTGTGATTGAGGACGTATTCATGTGCGGTTTGGGGAAATGCGT
GTAAACAAGTGGTGTACGGGCTGCTTGACTGGACAGGAAAGGGATACACG
AGGGCTGTATTCATGGTGTGGATAGGAAAGGGATACACAAGGGCTGTATT
CATGTTGAGCCCAATGGCTTTGGCCCTCTCAGGTGTGGTTAAGGGAAAGA
GGGAACAAAGGGAAAGGAGGGTTAGGTAATAGGTTGTGTATGTTTCTCTT
TAGATGTAAGATTGATGTTGTGAATAGAATAATGAGTCCCAGGCTGAAGT
ATAAGCAGTGGTTCATGAAAGTTGAC back to topCoding sequence (CDS) from alignment at scaffold_57:99636..101211+ >mRNA_10470 ID=mRNA_10470|Name=jgi.p|Nanoce1779_2|611630|organism=Nannochloropsis oceanica|type=CDS|length=507bp|location=Sequence derived from alignment at scaffold_57:99636..101211+ (Nannochloropsis oceanica)
ATGGGTGCTCTATCGGTGCTGGGATGGGTCCTGAGTTTATCTCAATTATA
TCATCTTTCCGTCTGCACTTCCTACCCCTCCCCCTACCGCATGTCTTATC
TCTTGCTTGGATATATCATGATGACCGGTATCCTTTTTTTTCTGTGTGCT
TGTGTGCCATGTTTCGTCCTTTCCATTTCTTCTTCCCCTTCTATCTTCTC
CTTCTCTTCTCATATTCTTCATGCGATCTACATCGATACCCCTTCTTTCT
CTCCCCAGACGAAATATCGCTCGGTGTGTGTCGATCGCATGCTCGCGTCT
TTACACCGTCGTTGTCACGTGAGGGACGCGACCAATGGATTTCTTGCGGT
ACCATTTCACCACGAGTCGCAATTTGACCTGGCAATGTTGAAAGCGTTGG
TAGTCCATTCCAAGCCGGGACGGTGCAAAAAAACAATGATGACTAAGAAG
ATCCTTTTGAATCGCTGGTGTAGTAGCATAAGTATGTATGTATGGTGGTG
CATGTGA back to top
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