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Properties
| Property Name | Value |
|---|
| TranscriptId | 547853 |
| Track | FilteredModels2 |
| ProteinId | 547767 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:51291..52691 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10311 ID=mRNA_10311|Name=jgi.p|Nanoce1779_2|547767|organism=Nannochloropsis oceanica|type=mRNA|length=1251bp
GACTTGCACTTGTCATGACGTCCTTCTTGGTGTTCTTTGCTCGTTCACTT
TTCCACTTTCTTGCCTTATTTTTCTTGTTGCTTGATGTGAAAATATCTCT
TTTTGGGCCCTTGTATTAGTCCTCAGTACAGATGGCGTCTTGATTTCTTC
TGAGGGACAGTAAGGCACGCCTTTCTTCTCTTCCTTTCCCAGCAGACACA
ACTCATACGCATTTCGAGATCTCCCTCAGCGTCCGCACACCGGGCAGCTC
CTTTCCGGTAGCGCGTGGTCGCGTGTTACCTTGTCCGTTCAAGCGCATGC
CCAGCACGATTTCATAGCACCACTCCCTATGAGCAGCACCGCATGCCCCA
CATGTCTGATCACCTCTCTGTTCATCCCTCCCTTCCCTCCCACACTTCCA
TTAAACGCCGCAAAATTACCACCAACCCAACAAGCGAGCAAGAATGATCC
TGGCTAAGTCCTTCGCGACCCAATCCCTGCGCCACCAGGCCACCGCCACC
GCCGCCAAGAAGCTGGCCTCCGTGCAGCTCTTCTCGACGGTTCGCGAGAC
CCTCCCCCATCACCCGTCCGATAAGGCCGCGATTGCTGAGGTGGCGGCGA
CGACCGAAAAATGGCTCAAGACCGTCACTGGCCAGAAGCCGACCAGCCCC
GCGGAGACGGCCGCCCTCTACGCTAACGACGGCGTTCTCTGGGCCACCGT
ATCCACGGAGCTGCGCGTGAACCCCAAGGAGATCCGCGACTACTTTGACG
TGTTTGCACGCCTGCCTAACCTGACCGTGACGGACTACAAGCCCTTCATC
CGCATGTATGGGGACATCGCCCTGAACGACGGCTACTACACCGTGCACTT
CGACTCCCCCGACGGCAAGAAGGTCACGACCAAGGCCCGCTACGTCTTCG
TCTACAAACGCAACGAGTCCTCGGGCGCTTGGGAGATCATTGACCACCAT
TCCTCGGCCATGCCCGTGGCACCCGCGGGACTCAAGACAGCCACCACCGT
CGCACCGCCTAGCTAGATGGCAGACTGGAAACTCGTTTTGGTCGAGTGAT
GTGGCATCTGTAGGTGTGAGCTCTTTCGTCTGTGGAGGAGGCAACGGTGT
GCAGTGACCTCGATAGAGGGTAGTAAGGTGAAAGAAGTGTACATTTACTC
CGATTCCAATTGCAGCGAACTCAAAGAATTTTTAGAACGACAGAGGTAGG
ACTATAGAACAAAAACAAGAAAAGTACAAAAGAAGAAAAACAGCTTTAGG
G back to topprotein sequence of jgi.p|Nanoce1779_2|547767 >mRNA_10311-protein ID=mRNA_10311-protein|Name=jgi.p|Nanoce1779_2|547767|organism=Nannochloropsis oceanica|type=polypeptide|length=191bp
MILAKSFATQSLRHQATATAAKKLASVQLFSTVRETLPHHPSDKAAIAEV
AATTEKWLKTVTGQKPTSPAETAALYANDGVLWATVSTELRVNPKEIRDY
FDVFARLPNLTVTDYKPFIRMYGDIALNDGYYTVHFDSPDGKKVTTKARY
VFVYKRNESSGAWEIIDHHSSAMPVAPAGLKTATTVAPPS* back to topmRNA from alignment at scaffold_60:51291..52691- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10311 ID=mRNA_10311|Name=jgi.p|Nanoce1779_2|547767|organism=Nannochloropsis oceanica|type=mRNA|length=1401bp|location=Sequence derived from alignment at scaffold_60:51291..52691- (Nannochloropsis oceanica)
GACTTGCACTTGTCATGACGTCCTTCTTGGTGTTCTTTGCTCGTTCACTT
TTCCACTTTCTTGCCTTATTTTTCTTGTTGCTTGATGTGAAAATATCTCT
TTTTGGGCCCTTGTATTAGTCCTCAGTACAGATGGCGTCTTGATTTCTTC
TGAGGGACAGTAAGGCACGCCTTTCTTCTCTTCCTTTCCCAGCAGACACA
ACTCATACGCATTTCGAGATCTCCCTCAGCGTCCGCACACCGGGCAGCTC
CTTTCCGGTAGCGCGTGGTCGCGTGTTACCTTGTCCGTTCAAGCGCATGC
CCAGCACGATTTCATAGCACCACTCCCTATGAGCAGCACCGCATGCCCCA
CATGTCTGATCACCTCTCTGTTCATCCCTCCCTTCCCTCCCACACTTCCA
TTAAACGCCGCAAAATTACCACCAACCCAACAAGCGAGCAAGAATGATCC
TGGCTAAGTCCTTCGCGACCCAATCCCTGCGCCACCAGGCCACCGCCACC
GCCGCCAAGGTAAGTGCTAGTAGCAGTCCCAGAACCTTGCAAGAGAGTAG
ACCAAAATTGTATACACCCGCATCCCCAGCGCCTCCTCTTCTGCCTTGTG
CATTTATGTAATCATGGTCTCCCTCCCTTTCGGACACCCTATTCAACACC
ACCCCACAGAAGCTGGCCTCCGTGCAGCTCTTCTCGACGGTTCGCGAGAC
CCTCCCCCATCACCCGTCCGATAAGGCCGCGATTGCTGAGGTGGCGGCGA
CGACCGAAAAATGGCTCAAGACCGTCACTGGCCAGAAGCCGACCAGCCCC
GCGGAGACGGCCGCCCTCTACGCTAACGACGGCGTTCTCTGGGCCACCGT
ATCCACGGAGCTGCGCGTGAACCCCAAGGAGATCCGCGACTACTTTGACG
TGTTTGCACGCCTGCCTAACCTGACCGTGACGGACTACAAGCCCTTCATC
CGCATGTATGGGGACATCGCCCTGAACGACGGCTACTACACCGTGCACTT
CGACTCCCCCGACGGCAAGAAGGTCACGACCAAGGCCCGCTACGTCTTCG
TCTACAAACGCAACGAGTCCTCGGGCGCTTGGGAGATCATTGACCACCAT
TCCTCGGCCATGCCCGTGGCACCCGCGGGACTCAAGACAGCCACCACCGT
CGCACCGCCTAGCTAGATGGCAGACTGGAAACTCGTTTTGGTCGAGTGAT
GTGGCATCTGTAGGTGTGAGCTCTTTCGTCTGTGGAGGAGGCAACGGTGT
GCAGTGACCTCGATAGAGGGTAGTAAGGTGAAAGAAGTGTACATTTACTC
CGATTCCAATTGCAGCGAACTCAAAGAATTTTTAGAACGACAGAGGTAGG
ACTATAGAACAAAAACAAGAAAAGTACAAAAGAAGAAAAACAGCTTTAGG
G back to topCoding sequence (CDS) from alignment at scaffold_60:51291..52691- >mRNA_10311 ID=mRNA_10311|Name=jgi.p|Nanoce1779_2|547767|organism=Nannochloropsis oceanica|type=CDS|length=1146bp|location=Sequence derived from alignment at scaffold_60:51291..52691- (Nannochloropsis oceanica)
AAGCTGGCCTCCGTGCAGCTCTTCTCGACGGTTCGCGAGACCCTCCCCCA
TCACCCGTCCGATAAGGCCGCGATTGCTGAGGTGGCGGCGACGACCGAAA
AATGGCTCAAGACCGTCACTGGCCAGAAGCCGACCAGCCCCGCGGAGACG
GCCGCCCTCTACGCTAACGACGGCGTTCTCTGGGCCACCGTATCCACGGA
GCTGCGCGTGAACCCCAAGGAGATCCGCGACTACTTTGACGTGTTTGCAC
GCCTGCCTAACCTGACCGTGACGGACTACAAGCCCTTCATCCGCATGTAT
GGGGACATCGCCCTGAACGACGGCTACTACACCGTGCACTTCGACTCCCC
CGACGGCAAGAAGGTCACGACCAAGGCCCGCTACGTCTTCGTCTACAAAC
GCAACGAGTCCTCGGGCGCTTGGGAGATCATTGACCACCATTCCTCGGCC
ATGCCCGTGGCACCCGCGGGACTCAAGACAGCCACCACCGTCGCACCGCC
TAGCTAGATGATCCTGGCTAAGTCCTTCGCGACCCAATCCCTGCGCCACC
AGGCCACCGCCACCGCCGCCAAGAAGCTGGCCTCCGTGCAGCTCTTCTCG
ACGGTTCGCGAGACCCTCCCCCATCACCCGTCCGATAAGGCCGCGATTGC
TGAGGTGGCGGCGACGACCGAAAAATGGCTCAAGACCGTCACTGGCCAGA
AGCCGACCAGCCCCGCGGAGACGGCCGCCCTCTACGCTAACGACGGCGTT
CTCTGGGCCACCGTATCCACGGAGCTGCGCGTGAACCCCAAGGAGATCCG
CGACTACTTTGACGTGTTTGCACGCCTGCCTAACCTGACCGTGACGGACT
ACAAGCCCTTCATCCGCATGTATGGGGACATCGCCCTGAACGACGGCTAC
TACACCGTGCACTTCGACTCCCCCGACGGCAAGAAGGTCACGACCAAGGC
CCGCTACGTCTTCGTCTACAAACGCAACGAGTCCTCGGGCGCTTGGGAGA
TCATTGACCACCATTCCTCGGCCATGCCCGTGGCACCCGCGGGACTCAAG
ACAGCCACCACCGTCGCACCGCCTAGCTAGATGATCCTGGCTAAGTCCTT
CGCGACCCAATCCCTGCGCCACCAGGCCACCGCCACCGCCGCCAAG back to top
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