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Properties
| Property Name | Value |
|---|
| TranscriptId | 374293 |
| Track | FilteredModels2 |
| ProteinId | 374207 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_60 | supercontig | scaffold_60:38770..42472 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10308 ID=mRNA_10308|Name=jgi.p|Nanoce1779_2|374207|organism=Nannochloropsis oceanica|type=mRNA|length=1793bp
GAGGGAGGGGGAGGGAATGGGTGGGAACGATGGTGAGGAGCAGATGGATC
GAGCTTTGGGGGCATTGGAGGGGAGGGAGGCAGAGGTTGGAGTAGGAGTA
ATGTCGGCCCTGAAAGAGGCGCGTGCCTTGCTGCCCCCCCCGCCGTCAAG
GAAGCAGGAGGAGAAAGGAAAGGAGGATGAGACAGCCCTGCATCAAGCGG
TGGAAGGGGCGCTGCTGGCATTGGAGATGTACCAGAGTAACTTGCTCGAG
GGTGGAGTGTGGAAGGAGCTGGAAACGGACCCCATTGCTGGGTCTCTCCA
GAGGGGAGGGCAGCAGCAGCAGCAGCAGGAGCAGCAGCAACAACAGCAGC
TGGATGACGAGGAGGACGAGCTGTTGGTTCCGAATGGAGATGGAGGGGAA
GAAGGAAGCGTGCAGAGCCGTTGTAGCTGCGGTAAAAGGTGAGGAGGACG
AGGGAGAGAATAAGGAGGGCGCTGGAGCTACTTCCCCTCCCCCTTCCCTC
AAGCGAGAGATGACGAGCGAGTCTCTCGTCTCGCTGAGCGCAGCCCTCCG
CCAGCTCCACAACGGGTGATATGCCGCCTCCCCCTCCCTCCCTCCCGCCC
TCTGCCTCCTCCCTTGGCGTAGACCTGCAGCATTCGATCTCTCGATCCAC
AGGGAGCATGGACACGGACTCCGTAGGTAGTGGGTCTCGTCGCTCTTCCA
TGGGAGACGGGGACGAAGACGAGGAGGATGAAGATGATATTGATGCCTAT
CGCGATATCACCCCGGAAGACTTTGAGGATAAGCCCGAGGTCGTCCAACG
GTGCTATGCAATCTTGCAGGCGCTCATGCACGCCAAGGGAGGGTCGCAAT
TTAAGTATCAACCACACATTGAAGGTTATCATGACGTGGTGGCCCGCCCG
CTGGGTCTTATGGACGTCACTCGGAACTTGAGGAACGGCATGTATGATTC
GAGTGTGGGGCAATTCGCGGCGGATGTGCGGTTGGTGTTTGTGAATTGCG
CCTTGTTCAATGCGGAGAATGACGTGATCATGCATGATGCCGATCGTCTC
GTGGCCCGCTTTGACCGGCTGTTGCTTCAGTGGGTGTTGGATGGAGAGGC
CCCGCCGATAGGGGACTTAGGCTGGACACGACGTGTTTGGTGTGCCGAGA
CCCCATGCCGCAGTCAGTGGAGGTGGAGTTGGTGGGCGGGATCAAGGAAT
GGCGACCCGTGGCTCCGCAGCAGTGCAAACCGCTGCGACGCCTGCTTCCA
CCCGGACTGCGTGAAGATGCCCATCGTACACCCTAATGTCCGCAACGCCT
CGGAGACGGGGAAGGAGAAGGAGTACTGGTTCTGCTCCGACTGTGTGCGC
GAAAAGAAGGCCGCGACATCGACCCTTACCTCCGCCTCCGTGTCATCAAG
CACTTCCCCGGCACGGGCGCCTATGCCGGCCGCGTGGTCTCGGTCCGGTA
CAACGAGGAAGACGTGTCAGATGATGAGGAGTACGTGCGGCGGCAGAAGG
AGGCGTTGTTGTTGAAGAAGAAAAGAGGGGTCCCAACGATGCGGAAGGGG
AGTATGATCATGCATGAATGTTGCGCGGACGCGTTGATGGAAGCCAAGGC
GGCGGGGGAGGCGAGGGTGAGGAAAGGAGAGAGGAAGGAGGCGGTGGAGG
GGATGGCGTTCACGGGGAGGGGGAGGACGACGAATTTGGGCCAGGATAGG
AAGGGGAGGTTCTACTGGCAATTGGCGGGGGAGCCGTCGTATTGTTCGTT
CAGCCGTGGGATAGACAAGGGCAGTTGGAGGGGAACGGGGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|374207 >mRNA_10308-protein ID=mRNA_10308-protein|Name=jgi.p|Nanoce1779_2|374207|organism=Nannochloropsis oceanica|type=polypeptide|length=315bp
MPPPPPSLPPSASSLGVDLQHSISRSTGSMDTDSVGSGSRRSSMGDGDED
EEDEDDIDAYRDITPEDFEDKPEVVQRCYAILQALMHAKGGSQFKYQPHI
EGYHDVVARPLGLMDVTRNLRNGMYDSSVGQFAADVRLVFVNCALFNAEN
DVIMHDADRLVARFDRLLLQWVLDGEAPPIGDLGWTRRVWCAETPCRSQW
RWSWWAGSRNGDPWLRSSANRCDACFHPDCVKMPIVHPNVRNASETGKEK
EYWFCSDCVREKKAATSTLTSASVSSSTSPARAPMPAAWSRSGTTRKTCQ
MMRSTCGGRRRRCC* back to topmRNA from alignment at scaffold_60:38770..42472- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10308 ID=mRNA_10308|Name=jgi.p|Nanoce1779_2|374207|organism=Nannochloropsis oceanica|type=mRNA|length=3703bp|location=Sequence derived from alignment at scaffold_60:38770..42472- (Nannochloropsis oceanica)
GAGGGAGGGGGAGGGAATGGGTGGGAACGATGGTGAGGAGCAGATGGATC
GAGCTTTGGGGGCATTGGAGGGGAGGGAGGCAGAGGTTGGAGTAGGAGTA
ATGTCGGCCCTGAAAGAGGCGCGTGCCTTGCTGCCCCCCCCGCCGTCAAG
GAAGCAGGAGGAGAAAGGAAAGGAGGATGAGACAGCCCTGCATCAAGCGG
TGGAAGGGGCGCTGCTGGCATTGGAGATGTACCAGAGTAACTTGCTCGAG
GGTGGAGTGTGGAAGGAGCTGGAAACGGACCCCATTGCTGGGTCTCTCCA
GAGGGGAGGGCAGCAGCAGCAGCAGCAGGAGCAGCAGCAACAACAGCAGC
TGGATGACGAGGAGGACGAGCTGTTGGTTCCGAATGGAGATGGAGGGGAA
GAAGGAAGCGTGCAGAGCCGTTGTAGCTGCGGTAAAAGGTGAGGAGGACG
AGGGAGAGAATAAGGAGGGCGCTGGAGCTACTTCCCCTCCCCCTTCCCTC
AAGCGAGAGATGACGAGCGAGTCTCTCGTCTCGCTGAGCGCAGCCCTCCG
CCAGCTCCACAACGGGTGATATGCCGCCTCCCCCTCCCTCCCTCCCGCCC
TCTGCCTCCTCCCTTGGCGTAGACCTGCAGCATTCGATCTCTCGATCCAC
AGGGAGCATGGACACGGACTCCGTAGGTAGTGGGTCTCGTCGCTCTTCCA
TGGGAGACGGGAAGAAGGGGGGGGGGGAAGAGGGGGAGGAATGGGAAGGG
GAAGCGACTGTCCTTGATTGAAGGAGAGGACGGATGGGAGGAGGAGGGAG
AGGAGGAAGAGGAGGAGGGGAAGGAAGGGGAGGACGAGGATAACGAGGAC
GAGGACGAGGACGGGGACGAAGACGAGGAGGATGAAGATGATATTGATGC
CTATCGCGATATCACCCCGGAAGACTTTGAGGATAAGCCCGAGGTCGTCC
AACGGTGCTATGCAATCTTGCAGGCGCTCATGCACGCCAAGGGAGGGTCG
CAATTTAAGTATCAACCACACATTGAAGGTTATCATGACGTGGTGGCCCG
CCCGCTGGGTCTTATGGACGTCACTCGGAACTTGAGGAACGGCATGTATG
ATTCGAGTGTGGGGCAATTCGCGGCGGATGTGCGGTTGGTGTTTGTGAAT
TGCGCCTTGTTCAATGCGGAGAATGACGTGATCATGCATGATGCCGATCG
TCTCGTGGCCCGCTTTGACCGGCTGTTGCTTCAGTGGGTGTTGGATGGAG
AGGCCCCGCCGATAGGGGACTTAGGCTGGACACGACGTGTTTGGTGTGCC
GAGACCCCATGCCGCAGTCAGTGGAGGTGGAGTTGGTGGGCGGGATCAAG
GAATGGCGACCCGTGGCTCCGCAGCAGTGCAAACCGCTGCGACGCCTGCT
TCCACCCGGACTGCGTGAAGATGCCCATCGTACACCCTAATGTCCGCAAC
GCCTCGGAGACGGGGAAGGAGAAGGAGTACTGGTTCTGCTCCGACTGTGT
GCGCGAAAAGAAGGCCGCGACATCGACCCTTACCTCCGCCTCCGTGTCAT
CAAGCACTTCCCCGGCACGGGCGCCTATGCCGGCCGCGTGGTCTCGGTCC
GGTACAACGCGGGAGACGGCGATCTATTCCCTCCTCTTCCGCGATCCTTC
TCTCCCTTCCTCCTTCTTCGAACATACCCTCACTCGGCCCGCCCTCCGCT
CCCTTCTCCTGGCCCAGGGCCTGCCGCAACAGAACCCTGAGCTGGCCCGA
CTCCTCCTCCACCGCTCCCCCCCCGCCATAGACCCAAATGTGAGTTCGAG
GCCCTCGGGCACACCAAATGGGGGCTGGGATTGCTCTTGGAGGGGGAGGG
AAGGCTGCCTCGCAAGCTTGATCCTGAGGTGAGTCTGGTGGCGCGGCGGT
GGGTGAAGGGGGGTGATGTCGAGGTATTGGAGCTCCTGAGGGGATCAGGG
CGTTAGATGCAGGGGTGGGGGGGAGGAAAGGAGGGAGGGCGGGAGCGAGG
AAGGGGGGGAAAGAGTGGGGTGGCGTGCTTGGTGGCGTTGGCGGGCATGT
GCGGGGGGACAGGAAGGATGAGGGAGTACCTAGAGGGACACGAGCAAGAC
CTCAGGGGGCAGATTGGGCAGGCTTTGATAGAGGGAGGGGAAGGAGGGAA
GGAGGAAGGGGAGGAGGGAGGTATAGGAGGGGAAGGAGGAGGAGGAGAAA
AGGCACTGGTGCCTGTACATAGGACTGAAGAGAAGGAGGAGGGGGAGGAA
GAGAAGGAGGACCAGCTGTCGCAGTATGTGCCTGAGAATTTGCTGCCGGG
GGCCGGGGGAACGGCGAGGTTGGTGAAGGAGGAGGAAGACGTGTCAGATG
ATGAGGAGTACGTGCGGCGGCAGAAGGAGGCGTTGTTGTTGAAGAAGAAA
AGAGGGGTTGGACGGAGGAGGGGGTTAAGGAGGAGGAGGAAGCGCAGAGG
AGCAGCGGGAGGAGATTATGGGGAAGAGACGGAGAGTGAGGAGGAGGAGG
AGGACGACGACGACGACGAGGAGGAGGAGGACGAGGACGAGATTGAAATA
GAAGATGAGGACGAGGCGGAGGATGAGGCGGAGGACGAGGAAGAGCAGAT
TGTTAAGCGGGGACGGGGCCCGCGTGCGGAAGTCCCTCGAAGGAGAAGAG
GCAGATGCTGATGCCGCTGCTACAGCTGCTGCTGCTGGTGCTGGTGCTGC
CATGTTTTTCCTCCTCCACTATCCAAGAGCAGCAGTTCCAGCGAAATGGA
CGTGGCAGACGGCAAGGATGCCAAAGTGGGAGGGAAGCAGCAGTGGTGTT
GAGGCCAAGACAAACAAGGGGCAGTTACAATAAGCGAGAGCCGGGAATAT
TGGTGGGTCTGGATTTGTTGACAGAGGGAGGAGGAGACCTGCTCTTGCTG
GGTAAGCAGCCGTTGAGAGCACGGGAATATCAGTGTTTCGAGCAGGGGGT
GAAGCAGGAGACGAAGGGGCGTTGGGCAGGGAGGGCATACGGCTGCAGAG
GCGCTTGGTGAGGAGGGGAGGTGGGGATGGAGGGGAGGACGATTATGGAG
GTAACGAGGACACGCAGGACGAGGACGGGGGGGGACGAGGAGGAGGGAGG
GGGGGGAAGGAGGTGCGGTGCGGAATGTGCGGGGAGACGGGCAATTTTTG
TGTAACGTGATGGTGCACGGACCGACAGTGGAGGACTACTACAAGCTTCC
CCCTGACGTCCGTCAGAAGCTGGAGGGCGTTCAACCAGTAGCTGTGCAGC
AGCAGTGGGAGTGGTGGTGGTGGCAGTGGTGGTGGAGGAAGGGAGGAAGG
GCCAGATCGGGCGGTATCTTGTGGCGGCCGGTGGATGACCAGGCTGGCGG
CAGAGACGGAGGCGGCCCTACGGGAGGTGTTCGCGACCGCTCCCCCTGGG
AGGGTGAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGTCCCAACGAT
GCGGAAGGGGAGTATGATCATGCATGAATGTTGCGCGGACGCGTTGATGG
AAGCCAAGGCGGCGGGGGAGGCGAGGGTGAGGAAAGGAGAGAGGAAGGAG
GCGGTGGAGGGGATGGCGTTCACGGGGAGGGGGAGGACGACGAATTTGGG
CCAGGATAGGAAGGGGAGGTTCTACTGGCAATTGGCGGGGGAGCCGTCGT
ATTGTTCGTTCAGCCGTGGGATAGACAAGGGCAGTTGGAGGGGAACGGGG
GGG back to topCoding sequence (CDS) from alignment at scaffold_60:38770..42472- >mRNA_10308 ID=mRNA_10308|Name=jgi.p|Nanoce1779_2|374207|organism=Nannochloropsis oceanica|type=CDS|length=2835bp|location=Sequence derived from alignment at scaffold_60:38770..42472- (Nannochloropsis oceanica)
GAGGAAGACGTGTCAGATGATGAGGAGTACGTGCGGCGGCAGAAGGAGGC
GTTGTTGTTGAGACGGGGACGAAGACGAGGAGGATGAAGATGATATTGAT
GCCTATCGCGATATCACCCCGGAAGACTTTGAGGATAAGCCCGAGGTCGT
CCAACGGTGCTATGCAATCTTGCAGGCGCTCATGCACGCCAAGGGAGGGT
CGCAATTTAAGTATCAACCACACATTGAAGGTTATCATGACGTGGTGGCC
CGCCCGCTGGGTCTTATGGACGTCACTCGGAACTTGAGGAACGGCATGTA
TGATTCGAGTGTGGGGCAATTCGCGGCGGATGTGCGGTTGGTGTTTGTGA
ATTGCGCCTTGTTCAATGCGGAGAATGACGTGATCATGCATGATGCCGAT
CGTCTCGTGGCCCGCTTTGACCGGCTGTTGCTTCAGTGGGTGTTGGATGG
AGAGGCCCCGCCGATAGGGGACTTAGGCTGGACACGACGTGTTTGGTGTG
CCGAGACCCCATGCCGCAGTCAGTGGAGGTGGAGTTGGTGGGCGGGATCA
AGGAATGGCGACCCGTGGCTCCGCAGCAGTGCAAACCGCTGCGACGCCTG
CTTCCACCCGGACTGCGTGAAGATGCCCATCGTACACCCTAATGTCCGCA
ACGCCTCGGAGACGGGGAAGGAGAAGGAGTACTGGTTCTGCTCCGACTGT
GTGCGCGAAAAGAAGGCCGCGACATCGACCCTTACCTCCGCCTCCGTGTC
ATCAAGCACTTCCCCGGCACGGGCGCCTATGCCGGCCGCGTGGTCTCGGT
CCGGTACAACATGCCGCCTCCCCCTCCCTCCCTCCCGCCCTCTGCCTCCT
CCCTTGGCGTAGACCTGCAGCATTCGATCTCTCGATCCACAGGGAGCATG
GACACGGACTCCGTAGGTAGTGGGTCTCGTCGCTCTTCCATGGGAGAGGA
AGACGTGTCAGATGATGAGGAGTACGTGCGGCGGCAGAAGGAGGCGTTGT
TGTTGAGACGGGGACGAAGACGAGGAGGATGAAGATGATATTGATGCCTA
TCGCGATATCACCCCGGAAGACTTTGAGGATAAGCCCGAGGTCGTCCAAC
GGTGCTATGCAATCTTGCAGGCGCTCATGCACGCCAAGGGAGGGTCGCAA
TTTAAGTATCAACCACACATTGAAGGTTATCATGACGTGGTGGCCCGCCC
GCTGGGTCTTATGGACGTCACTCGGAACTTGAGGAACGGCATGTATGATT
CGAGTGTGGGGCAATTCGCGGCGGATGTGCGGTTGGTGTTTGTGAATTGC
GCCTTGTTCAATGCGGAGAATGACGTGATCATGCATGATGCCGATCGTCT
CGTGGCCCGCTTTGACCGGCTGTTGCTTCAGTGGGTGTTGGATGGAGAGG
CCCCGCCGATAGGGGACTTAGGCTGGACACGACGTGTTTGGTGTGCCGAG
ACCCCATGCCGCAGTCAGTGGAGGTGGAGTTGGTGGGCGGGATCAAGGAA
TGGCGACCCGTGGCTCCGCAGCAGTGCAAACCGCTGCGACGCCTGCTTCC
ACCCGGACTGCGTGAAGATGCCCATCGTACACCCTAATGTCCGCAACGCC
TCGGAGACGGGGAAGGAGAAGGAGTACTGGTTCTGCTCCGACTGTGTGCG
CGAAAAGAAGGCCGCGACATCGACCCTTACCTCCGCCTCCGTGTCATCAA
GCACTTCCCCGGCACGGGCGCCTATGCCGGCCGCGTGGTCTCGGTCCGGT
ACAACATGCCGCCTCCCCCTCCCTCCCTCCCGCCCTCTGCCTCCTCCCTT
GGCGTAGACCTGCAGCATTCGATCTCTCGATCCACAGGGAGCATGGACAC
GGACTCCGTAGGTAGTGGGTCTCGTCGCTCTTCCATGGGAGAGGAAGACG
TGTCAGATGATGAGGAGTACGTGCGGCGGCAGAAGGAGGCGTTGTTGTTG
AGACGGGGACGAAGACGAGGAGGATGAAGATGATATTGATGCCTATCGCG
ATATCACCCCGGAAGACTTTGAGGATAAGCCCGAGGTCGTCCAACGGTGC
TATGCAATCTTGCAGGCGCTCATGCACGCCAAGGGAGGGTCGCAATTTAA
GTATCAACCACACATTGAAGGTTATCATGACGTGGTGGCCCGCCCGCTGG
GTCTTATGGACGTCACTCGGAACTTGAGGAACGGCATGTATGATTCGAGT
GTGGGGCAATTCGCGGCGGATGTGCGGTTGGTGTTTGTGAATTGCGCCTT
GTTCAATGCGGAGAATGACGTGATCATGCATGATGCCGATCGTCTCGTGG
CCCGCTTTGACCGGCTGTTGCTTCAGTGGGTGTTGGATGGAGAGGCCCCG
CCGATAGGGGACTTAGGCTGGACACGACGTGTTTGGTGTGCCGAGACCCC
ATGCCGCAGTCAGTGGAGGTGGAGTTGGTGGGCGGGATCAAGGAATGGCG
ACCCGTGGCTCCGCAGCAGTGCAAACCGCTGCGACGCCTGCTTCCACCCG
GACTGCGTGAAGATGCCCATCGTACACCCTAATGTCCGCAACGCCTCGGA
GACGGGGAAGGAGAAGGAGTACTGGTTCTGCTCCGACTGTGTGCGCGAAA
AGAAGGCCGCGACATCGACCCTTACCTCCGCCTCCGTGTCATCAAGCACT
TCCCCGGCACGGGCGCCTATGCCGGCCGCGTGGTCTCGGTCCGGTACAAC
ATGCCGCCTCCCCCTCCCTCCCTCCCGCCCTCTGCCTCCTCCCTTGGCGT
AGACCTGCAGCATTCGATCTCTCGATCCACAGGGAGCATGGACACGGACT
CCGTAGGTAGTGGGTCTCGTCGCTCTTCCATGGGA back to top
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