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Properties
| Property Name | Value |
|---|
| TranscriptId | 609921 |
| Track | FilteredModels2 |
| ProteinId | 609835 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:68034..69102 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10266 ID=mRNA_10266|Name=jgi.p|Nanoce1779_2|609835|organism=Nannochloropsis oceanica|type=mRNA|length=888bp
GGGAAGGAGGGCAATGTCGTCACCGCTCTTAACGGCAAGCGGAATCGGCC
GAACACTACACCCGGCGGGGGGGGCGGGCGACGTCGGCAGCGGGGGGTAA
AGAAGGTCATAGAAAGTCTGCGGCGTTTCGGACCCCTCCACTTGATGGAA
GGGGACGCCACGACGGACGTGTGCCTGCAACTCGCAGGCTTGGGACGTGC
GCAGTCGTGTGTGATGATGGCAGATAAGGGGAACAGGATGATTGATGGGC
ATCTGGTGGACAACTCGTCGTTAAGGCGTTTTTTGAGTGTACAGAAGTTC
ATGTTTGAAGCTGTGGGGAAGCAGAACGTCCGAGCCGACTTCAGATTTGT
CTGCGAGGTTCAGAATTCCTCGACTCTCAAGATCATGAGCAGGTACCAAG
AGAAAATCAAGACAGCTTCCCGCGACGTCCTACTTCACTCCCTCCGAGAA
CTCTCCTTCCACCCCTCCCTCGTTCCAACTCCGCCTCCGGGCCGCCACCG
TGGCTCCCACCGCTGGGCGTGTCACAAGTGCAGTATCAACAGCATCAGCA
ACAGCTTCAGTGGGAAGGTTGCCGGAGAAACCTGTCTCTTCATTCCTTGC
GGGCGACGAGCTCGAAAGCCATCGGCCCGAGGTCTCAAATGGCGTTCATT
TTGGGGTGAAAGAAGTCTACCTCTGTCCTTTTTTTGCGAGTGGAAAAGGC
TTTCTCACGCACATCTTCGACACGTTGCAGGTACAATTTTATTATGCGCC
GGTCGTGACGAGGTTTGTGCAGCTGCTTGTCGGTCACGTGCTTGACGTGG
AGCACCCCGACGGGCCTTGGGGGGGGAGGGGGCCCAGTGGAGGGAGGGAG
GGAGGAAGGACAGGAGGAGGAGGAAGAGGAGGAGGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|609835 >mRNA_10266-protein ID=mRNA_10266-protein|Name=jgi.p|Nanoce1779_2|609835|organism=Nannochloropsis oceanica|type=polypeptide|length=217bp
MEGDATTDVCLQLAGLGRAQSCVMMADKGNRMIDGHLVDNSSLRRFLSVQ
KFMFEAVGKQNVRADFRFVCEVQNSSTLKIMSRYQEKIKTASRDVLLHSL
RELSFHPSLVPTPPPGRHRGSHRWACHKCSINSISNSFSGKVAGETCLFI
PCGRRARKPSARGLKWRSFWGERSLPLSFFCEWKRLSHAHLRHVAGTILL
CAGRDEVCAAACRSRA* back to topmRNA from alignment at scaffold_47:68034..69102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10266 ID=mRNA_10266|Name=jgi.p|Nanoce1779_2|609835|organism=Nannochloropsis oceanica|type=mRNA|length=1069bp|location=Sequence derived from alignment at scaffold_47:68034..69102- (Nannochloropsis oceanica)
GGGAAGGAGGGCAATGTCGTCACCGCTCTTAACGGCAAGCGGAATCGGCC
GAACACTACACCCGGCGGGGGGGGCGGGCGACGTCGGCAGCGGGGGGTAA
AGAAGGTCATAGAAAGTCTGCGGCGTTTCGGACCCCTCCACTTGATGGAA
GGGGACGCCACGACGGACGTGTGCCTGCAACTCGCAGGCTTGGGACGTGC
GCAGTCGTGTGTGATGATGGCAGATAAGGGGAACAGGATGATTGATGGGC
ATCTGGTGGACAACTCGTCGTTAAGGCGTTTTTTGAGTGTACAGAAGTTC
ATGTTTGAAGCTGTGGGGAAGCAGAACGTCCGAGCCGACTTCAGATTTGT
CTGCGAGGTTCAGAATTCCTCGACTCTCAAGATCATGAGCAGGTAGGTCT
TGTCGATCCTTCCCCCTCCCTCCTTTCTTGCCTTAGGTTCGAAGGTTTAT
TGGTGGCTCTTCCCCCTCCCCCTCCTCGAGCTATTTTTTAATTCCATACG
TCCCATTTGGTCCCTTTAACCTCCTACCTGCTTGTCCAACCCCCTTCTTA
TAGGTACCAAGAGAAAATCAAGACAGCTTCCCGCGACGTCCTACTTCACT
CCCTCCGAGAACTCTCCTTCCACCCCTCCCTCCTTCCCTCCCTCCCTCCC
TCGTTCCAACTCCGCCTCCGGGCCGCCACCGTGGCTCCCACCGCTGGGCG
TGTCACAAGTGCAGTATCAACAGCATCAGCAACAGCTTCAGTGGGAAGGT
TGCCGGAGAAACCTGTCTCTTCATTCCTTGCGGGCGACGAGCTCGAAAGC
CATCGGCCCGAGGTCTCAAATGGCGTTCATTTTGGGGTGAAAGAAGTCTA
CCTCTGTCCTTTTTTTGCGAGTGGAAAAGGCTTTCTCACGCACATCTTCG
ACACGTTGCAGGTACAATTTTATTATGCGCCGGTCGTGACGAGGTTTGTG
CAGCTGCTTGTCGGTCACGTGCTTGACGTGGAGCACCCCGACGGGCCTTG
GGGGGGGAGGGGGCCCAGTGGAGGGAGGGAGGGAGGAAGGACAGGAGGAG
GAGGAAGAGGAGGAGGAGG back to topCoding sequence (CDS) from alignment at scaffold_47:68034..69102- >mRNA_10266 ID=mRNA_10266|Name=jgi.p|Nanoce1779_2|609835|organism=Nannochloropsis oceanica|type=CDS|length=1953bp|location=Sequence derived from alignment at scaffold_47:68034..69102- (Nannochloropsis oceanica)
CCCTCCCTCGTTCCAACTCCGCCTCCGGGCCGCCACCGTGGCTCCCACCG
CTGGGCGTGTCACAAGTGCAGTATCAACAGCATCAGCAACAGCTTCAGTG
GGAAGGTTGCCGGAGAAACCTGTCTCTTCATTCCTTGCGGGCGACGAGCT
CGAAAGCCATCGGCCCGAGGTCTCAAATGGCGTTCATTTTGGGGTGAAAG
AAGTCTACCTCTGTCCTTTTTTTGCGAGTGGAAAAGGCTTTCTCACGCAC
ATCTTCGACACGTTGCAGGTACAATTTTATTATGCGCCGGTCGTGACGAG
GTTTGTGCAGCTGCTTGTCGGTCACGTGCTTGAGTACCAAGAGAAAATCA
AGACAGCTTCCCGCGACGTCCTACTTCACTCCCTCCGAGAACTCTCCTTC
CACATGGAAGGGGACGCCACGACGGACGTGTGCCTGCAACTCGCAGGCTT
GGGACGTGCGCAGTCGTGTGTGATGATGGCAGATAAGGGGAACAGGATGA
TTGATGGGCATCTGGTGGACAACTCGTCGTTAAGGCGTTTTTTGAGTGTA
CAGAAGTTCATGTTTGAAGCTGTGGGGAAGCAGAACGTCCGAGCCGACTT
CAGATTTGTCTGCGAGGTTCAGAATTCCTCGACTCTCAAGATCATGAGCA
GCCCTCCCTCGTTCCAACTCCGCCTCCGGGCCGCCACCGTGGCTCCCACC
GCTGGGCGTGTCACAAGTGCAGTATCAACAGCATCAGCAACAGCTTCAGT
GGGAAGGTTGCCGGAGAAACCTGTCTCTTCATTCCTTGCGGGCGACGAGC
TCGAAAGCCATCGGCCCGAGGTCTCAAATGGCGTTCATTTTGGGGTGAAA
GAAGTCTACCTCTGTCCTTTTTTTGCGAGTGGAAAAGGCTTTCTCACGCA
CATCTTCGACACGTTGCAGGTACAATTTTATTATGCGCCGGTCGTGACGA
GGTTTGTGCAGCTGCTTGTCGGTCACGTGCTTGAGTACCAAGAGAAAATC
AAGACAGCTTCCCGCGACGTCCTACTTCACTCCCTCCGAGAACTCTCCTT
CCACATGGAAGGGGACGCCACGACGGACGTGTGCCTGCAACTCGCAGGCT
TGGGACGTGCGCAGTCGTGTGTGATGATGGCAGATAAGGGGAACAGGATG
ATTGATGGGCATCTGGTGGACAACTCGTCGTTAAGGCGTTTTTTGAGTGT
ACAGAAGTTCATGTTTGAAGCTGTGGGGAAGCAGAACGTCCGAGCCGACT
TCAGATTTGTCTGCGAGGTTCAGAATTCCTCGACTCTCAAGATCATGAGC
AGCCCTCCCTCGTTCCAACTCCGCCTCCGGGCCGCCACCGTGGCTCCCAC
CGCTGGGCGTGTCACAAGTGCAGTATCAACAGCATCAGCAACAGCTTCAG
TGGGAAGGTTGCCGGAGAAACCTGTCTCTTCATTCCTTGCGGGCGACGAG
CTCGAAAGCCATCGGCCCGAGGTCTCAAATGGCGTTCATTTTGGGGTGAA
AGAAGTCTACCTCTGTCCTTTTTTTGCGAGTGGAAAAGGCTTTCTCACGC
ACATCTTCGACACGTTGCAGGTACAATTTTATTATGCGCCGGTCGTGACG
AGGTTTGTGCAGCTGCTTGTCGGTCACGTGCTTGAGTACCAAGAGAAAAT
CAAGACAGCTTCCCGCGACGTCCTACTTCACTCCCTCCGAGAACTCTCCT
TCCACATGGAAGGGGACGCCACGACGGACGTGTGCCTGCAACTCGCAGGC
TTGGGACGTGCGCAGTCGTGTGTGATGATGGCAGATAAGGGGAACAGGAT
GATTGATGGGCATCTGGTGGACAACTCGTCGTTAAGGCGTTTTTTGAGTG
TACAGAAGTTCATGTTTGAAGCTGTGGGGAAGCAGAACGTCCGAGCCGAC
TTCAGATTTGTCTGCGAGGTTCAGAATTCCTCGACTCTCAAGATCATGAG
CAG back to top
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