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Properties
| Property Name | Value |
|---|
| TranscriptId | 610176 |
| Track | FilteredModels2 |
| ProteinId | 610090 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_48 | supercontig | scaffold_48:86224..88188 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10182 ID=mRNA_10182|Name=jgi.p|Nanoce1779_2|610090|organism=Nannochloropsis oceanica|type=mRNA|length=1123bp
TCCCCCTCCTCCTTCTCCTCCTCCCACTCCCACTCGAACTGCAGCGACTG
ATTGCCGCGGTATGCTTCCTTCAGCGCATCGGGAATACGGTTGGTCACCC
AGGCGTTGAAGCCCATCATCGTCATCAAGGCGGGCGTCCAGGCCGAGGGT
CCGAACGGATCGATCTGCCACCCTATTTTGGGCAGCATCCTCTCCTGAGA
GGCGGCAGGGAGGGACCGAAGGAGGGACCGAAGGAGGCTGTGTCCACTTT
GCATGTTGTGGATCTGAGTCTCGTAGCTGGCTATGGCCTCGTCGTGCATG
ACCCATCCCCCCCCCACCAGCTCCAGCCGGCCTTCCTCCACCAGATGCAG
GAAGTTTGCTTTGCGCTCGGGGAGAGTGGCAGGGTCGATCCACCACCGCC
AGAGGTAGGAGGCTTCGGCCCATACGAATCGGTAGTCGGGGTGGGCGGTC
AGGGCATCCGTGACGCTGTTGAGGACGGATTGAACCTCGGTTAGATAGTA
TCCTTCCACTGTCTTCTTGTACCCTGCGTCGCAGTGACTGTGTGGAATGA
CGTAGATCTCGTAGATCAAATCTTCTACACCCTTCTCCACATTTGCATCT
TCATGAATGGGAAGCAGGGAGGAAGGCGGGTTGGAGGGGGAGGTAGGGGG
AAAGCGACGGGTGCGGAGGGAGGGGTGGGCCGAGAGGAGCTGGGCGGGGA
GGAGGGTGGGAAGGAGGAGGACAAGGAAATGGAGGAGGAAGGACTGCGAG
AGGGACGCTGGCATCTTCTTTCAAGTGGTAGTATTGGCTTGGTTTACAAA
TTGGTTCGATTTTCTTCTTTCCCCTCTCGTCCACTATTGCTTCTGTGGCT
GGCTCGGAGGCGCCTGTTTATTCTGCTGTGTTTGCTGGGCGCGGGCCTGT
GCCGCCGCTTGCTGAGCGCGGGGATCGACCTTGACGAGGAGCACCCGCGG
TTGGTTCTTGTCGAGGAAAGTGGGTGTACGGATGGAGCTGCCGTCAGACA
ACACGACTGTCTGCATGAAGGAGCGGAGACGATGTCGCATTTGCTGGAGA
AGGGGTGTAAAGGTGTAGGCGTGGGTAGATGGTCGTGGTTGAAAAGGGCT
CTGCGATGCAATACAAGAAGCTG back to topprotein sequence of jgi.p|Nanoce1779_2|610090 >mRNA_10182-protein ID=mRNA_10182-protein|Name=jgi.p|Nanoce1779_2|610090|organism=Nannochloropsis oceanica|type=polypeptide|length=103bp
MGSREEGGLEGEVGGKRRVRREGWAERSWAGRRVGRRRTRKWRRKDCERD
AGIFFQVVVLAWFTNWFDFLLSPLVHYCFCGWLGGACLFCCVCWARACAA
AC* back to topmRNA from alignment at scaffold_48:86224..88188- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10182 ID=mRNA_10182|Name=jgi.p|Nanoce1779_2|610090|organism=Nannochloropsis oceanica|type=mRNA|length=1965bp|location=Sequence derived from alignment at scaffold_48:86224..88188- (Nannochloropsis oceanica)
TCCCCCTCCTCCTTCTCCTCCTCCCACTCCCACTCGAACTGCAGCGACTG
ATTGCCGCGGTATGCTTCCTTCAGCGCATCGGGAATACGGTTGGTCACCC
AGGCGTTGAAGCCTGTGAGGAAAGGGAGAGAGGGAGGGAGGGAGGGAGGG
AGCGAGCGAGGGAAAGCGTATGAAGACTACTGAGCGCATGCTTTCGCTCC
TCGACTCTTCCCTCCCTCCTTTCTTGCCCCCCTCCTTCCCTACCCATCAT
CGTCATCAAGGCGGGCGTCCAGGCCGAGGGTCCGAACGGATCGATCTGCC
ACCCTATTTTGGGCAGCATCCTCTCCTGAGAGGCGGCAGGGAGGGACCGA
AGGAGGGACCGAAGGAGGCTGTGTCCACTTTGCATGTTGTGGATCTGAGT
CTCGTAGCTGGGGAGGGAGGGGAGTAGCTTGAGCGCGGCATGGTTACCTT
CTCTGTATTTCCCTACCTATCTATCTATCTACCTCTACCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTACCTGGCTATGGCCTCGTCGTGCA
TGACCCATCCCCCCCCCACCAGCTCCAGCCGGCCTTCCTCCACCAGATGC
AGGAAGTTTGCTTTGCGCTCTACAGGTGGAGGGTAAGGGGCGGGGGGAGG
AAGGAGGAAGGTGATGTTAGTCCGATGCGATGCTGCAACGAACGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCACGCACCGGGGAGAGTGGC
AGGGTCGATCCACCACCGCCAGAGGTAGGAGGCTTCGGCCCATACGAATC
GGTAGTCGGGGTGGGCGGTCAGGGCATCCGTGACGCTGTTGAGGACGGAT
TGAACCTGGGGAAGGGAGGGCGGGAGGGAGGGAGGGAAGGAGAGGGGGAG
GGAGGGAAGGAGGGAAGGAGGGTGGTGGGATGAATGGCATGCACTGATTT
CGGAGGCACTAGAAAGACGTGTTGTGGCCGGCGGACGAGGAAGAACAGTG
GTGAATATGGATATGGATGGAGGGGAGGGGAGGAGGGAGGGAGGAACGAA
GGGAGAGCGAAAAGGAGGGCGTACCTCGGTTAGATAGTATCCTTCCACTG
TCTTCTTGTACCCTGCGTCGCAGTGACTGTGTGGAATGACGTAGATCTCG
TAGATCAAATCTTCTACACCCTTCTCCACATTTGCATCTTCATGAATGGG
AAGCAGGGAGGAAGGCGGGTTGGAGGGGGAGGTAGGGGGAAAGCGACGGG
TGCGGAGGGAGGGGTGGGCCGAGAGGAGCTGGGCGGGGAGGAGGGTGGGA
AGGAGGAGGACAAGGAAATGGAGGAGGAAGGACTGCGAGAGGGACGCTGG
CATCTTCTTTCAAGTGGTAGTATTGGCTTGGTTTACAAATTGGTTCGATT
TTCTTCTTTCCCTGCAAGAGGTGTGATGTACAAATTGTGCACTGTCAGCA
CTTTTCCCTCCCCTCCGTTGAGGCACACATGACATACAGACAGTAAGGCA
CGCACCCTCTCGTCCACTATTGCTTCTGTGGCTGGCTCGGAGGCGCCTGT
TTATTCTGCTGTGTTTGCTGGGCGCGGGCCTGTGCCGCCGCTTGCTGAGC
GCGGGGATCGACCTGTGGAGGGGAACGATGGTGTCAGTGACATCGCGGCC
GTCTACTATTAGGACAGCCTCGCAGGAAGCATATCCATGCCCATCGGCTC
TCTCTCTATATATATATACAATGCATTACATCCCATCCTCTTGGAGTCCC
ACCCCTGTGCCTTTCACGTACCTTGACGAGGAGCACCCGCGGTTGGTTCT
TGTCGAGGAAAGTGGGTGTACGGATGGAGCTGCCGTCAGACAACACGACT
GTCTGCATGAAGGAGCGGAGACGATGTCGCATTTGCTGGAGAAGGGGTGT
AAAGGTGTAGGCGTGGGTAGATGGTCGTGGTTGAAAAGGGCTCTGCGATG
CAATACAAGAAGCTG back to topCoding sequence (CDS) from alignment at scaffold_48:86224..88188- >mRNA_10182 ID=mRNA_10182|Name=jgi.p|Nanoce1779_2|610090|organism=Nannochloropsis oceanica|type=CDS|length=618bp|location=Sequence derived from alignment at scaffold_48:86224..88188- (Nannochloropsis oceanica)
CCTCTCGTCCACTATTGCTTCTGTGGCTGGCTCGGAGGCGCCTGTTTATT
CTGCTGTGTTTGCTGGGCGCGGGCCTGTGCCGCCGCTTGCTGAATGGGAA
GCAGGGAGGAAGGCGGGTTGGAGGGGGAGGTAGGGGGAAAGCGACGGGTG
CGGAGGGAGGGGTGGGCCGAGAGGAGCTGGGCGGGGAGGAGGGTGGGAAG
GAGGAGGACAAGGAAATGGAGGAGGAAGGACTGCGAGAGGGACGCTGGCA
TCTTCTTTCAAGTGGTAGTATTGGCTTGGTTTACAAATTGGTTCGATTTT
CTTCTTTCCCCTCTCGTCCACTATTGCTTCTGTGGCTGGCTCGGAGGCGC
CTGTTTATTCTGCTGTGTTTGCTGGGCGCGGGCCTGTGCCGCCGCTTGCT
GAATGGGAAGCAGGGAGGAAGGCGGGTTGGAGGGGGAGGTAGGGGGAAAG
CGACGGGTGCGGAGGGAGGGGTGGGCCGAGAGGAGCTGGGCGGGGAGGAG
GGTGGGAAGGAGGAGGACAAGGAAATGGAGGAGGAAGGACTGCGAGAGGG
ACGCTGGCATCTTCTTTCAAGTGGTAGTATTGGCTTGGTTTACAAATTGG
TTCGATTTTCTTCTTTCC back to top
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