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Properties
Property Name | Value |
TranscriptId | 609071 |
Track | FilteredModels2 |
ProteinId | 608985 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_43 | supercontig | scaffold_43:145164..148166 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10146 ID=mRNA_10146|Name=jgi.p|Nanoce1779_2|608985|organism=Nannochloropsis oceanica|type=mRNA|length=1983bp GAAGGAGGTGCAGGAGCAGCCTCCAGAACCACTGCCGCCATCACTGCTGC ATTCCTTTGTATTCCAAGTGGCAGCAGCCTCGTCAACGTATTCAGAAGAC CATACAGTCGACATACTCTTTCCTCCCCTCTTCCCTCCGCTTTCCCCTCC GTTACCACCAGCCTCGCTGCCGCAGCCGCTGGACGGGGACAGCCCAGCGA CCCCAAGGACGAAGATAATCGCCGTTGTCCTCCCCATCAAGGAGGAGCGG GAGCAGGAGGAGCAGCAGGAGCACCAGCAGGAGGAGCAGGACAAAGAAAT ACGATGACAAGCGGAATACGGGTCAATAAATGCTTTGCCTCCTTTGCGTC TCGACGTGAGGCGGACCGTCTCGTGGCCGCAGGCCGCGTCAAGATCAATG GCAAGGTGGCCGAGCCTGGAATCAGGGTTAATCCCGGAGACACCGTCACG CTCGACAACAAGCGTGTCGCCTGGGAAGCCCATGTCATCCTTCCCACTTC CTCCACCTCCCCCTCCTCGTCCTCGTCCTCGTCCTCGTCCTCGTCATCCT CTCCTACGAAAGAGTTGATCTACATCAAGTACTGGAAGCCGCGGGGCGTG ATCTGCACCACCGACGAGACCATCCCCGACAACATCATCTCCACGCTCGA TTTCCCCCAACGGATCTTCCCCGTGGGTCGCCTCGACAAGGAGAGCACAG GACTTATTCTATTGACAAACGACGGACGGGTGCCAAACGCCGTCCTCCGT TCTTCCCTCTTCCATCGTAAGACCTACAAGGTACGAGTAGATCAGCCCCT GACAGCTGACGACCTGCAGGCGTTGAGGGAGGGCATCGTTATCAGCACCC CCGTCCAGCGGGACCGCATCGATCGTGTCCTGACGGCCAAGACTCTGCCG TGTGAGGTGTCCATGTTGTCATTAAGGAATACCGCGAAGAGTGATAATAA TGGCAATCAGAACAATCAAAATGCTAATAAAAAGACTATCCAGGAAAATA GCGCGGCGACTACCGACGATTCCGACCTTGCCTTCCTCCGTAATTCGCGG TATTCGAACAACATGCACTCCAACACACGTGCGTGTTTTACCATTACCCT GAGAGAAGGCCGAAACCGTCAAATTCGACGGATGTGCGAGGCCCTCGGAT TGCGTGTGTTGGAGCTGCACCGTGAGAGCGTCATGGGTATTGGGCTCCAA GGGCTGCAAGGAGAGGGGTGGTGGGCGTACCTGACGGAGGAGGAGGAGGA GAAGGCGGCGTCATCCAAGCTAAGTCCCAACGGCTAATTGAACTTTGACG TAACGGAGAGTCTCATATCATCAATTGAATAATCAATCTTACCGTTAGGA TTTGTCACAAAGCACACACTCAAACCCTTGTGTAGATATGAAATAATAGG CATCTTTTGACAATCACTTTGACCAGCCATCCGCCGAGAGAGAATACCAG GACATCTCCCACACGCATGTGCGTTTTTTGGGAGTGAAAAAGGACCAGAA AGGACTCAAAAACCAAGATAAGGCCAGGCGAGACAGACAGAGAGCGAACA ATTCGATGAATACAAATGAAAAATATGATTTAATTGAGGGGGAAATTCGT GCTCGGGTTCGGAACAAAATTATCATTGAGCTTTTTTTGGAGGGGGTGGG TAGATTAAGAGTGTTGTTCGTTTGTCGTGCTCGTGAGTGCCTTGCGTCAA GGATCCAGTTGAATTTCGTGTGTGTGTCCGTGTCCTCTACGAGGGTGCTT CTGTTCTTTTGACTGCAGCTTTGAGCCCGAGTCACAGATGCTCCCTGCAC TCTCACTGTAGCAGCTTGTCTGGGACTTGGCGGAAACAATGGCGGTGCGA GGTGCGATCAAGTCGGGCTTGATACGGCCATCTTTGATGCTAGGTCCGAT GGAAGAGAGAAGAGAGAAGTAACGGACTATACAGAAAGTTATGTAGTTTT TTTGCTCTTTTTACTTTTTTGGGGTTTTAACCA back to topprotein sequence of jgi.p|Nanoce1779_2|608985 >mRNA_10146-protein ID=mRNA_10146-protein|Name=jgi.p|Nanoce1779_2|608985|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp MTSGIRVNKCFASFASRREADRLVAAGRVKINGKVAEPGIRVNPGDTVTL DNKRVAWEAHVILPTSSTSPSSSSSSSSSSSSSPTKELIYIKYWKPRGVI CTTDETIPDNIISTLDFPQRIFPVGRLDKESTGLILLTNDGRVPNAVLRS SLFHRKTYKVRVDQPLTADDLQALREGIVISTPVQRDRIDRVLTAKTLPC EVSMLSLRNTAKSDNNGNQNNQNANKKTIQENSAATTDDSDLAFLRNSRY SNNMHSNTRACFTITLREGRNRQIRRMCEALGLRVLELHRESVMGIGLQG LQGEGWWAYLTEEEEEKAASSKLSPNG* back to topmRNA from alignment at scaffold_43:145164..148166+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10146 ID=mRNA_10146|Name=jgi.p|Nanoce1779_2|608985|organism=Nannochloropsis oceanica|type=mRNA|length=3003bp|location=Sequence derived from alignment at scaffold_43:145164..148166+ (Nannochloropsis oceanica) GAAGGAGGTGCAGGAGCAGCCTCCAGAACCACTGCCGCCATCACTGCTGC
ATTCCTTTGTATTCCAAGTGGCAGCAGCCTCGTCAACGTATTCAGAAGAC
CATACAGTCGGTATGTCGCAAGAGGTCGAGGGTATGTTCACTCTCCCTCC
CTCCCTCCCTTCCTCCCACCCTCCCCCCCTTCCCTCCCTCCCTCCCTCTC
CCTCTCCCTTCGCTTGTGTACACATGCTCACCTATCCGTACCGTATTCCT
CCATAGACATACTCTTTCCTCCCCTCTTCCCTCCGCTTTCCCCTCCGTTA
CCACCAGCCTCGCTGCCGCAGCCGCTGGACGGGGACAGCCCAGCGACCCC
AAGGACGAAGATAATCGCCGTTGTCCTCCCCATCAAGGAGGAGCGGGAGC
AGGAGGAGCAGCAGGAGCACCAGCAGGAGGAGCAGGACAAAGAAATACGA
TGACAAGCGGAATACGGGTCAATAAATGCTTTGCCTCCTTTGCGTCTCGA
CGTGAGGCGGACCGTCTCGTGGCCGCAGGCCGCGTCAAGATCAATGGCAA
GGTACGTTTGCATTGCCCTCCCTCCCTCGCTCCTTCTCTCCCTTGAACCC
CGCCTCCTTCCCTCCCTCCTCCCCTACCTCTATCTGACCCCTCGCCATCC
CTCTTTCGCTTCCCTTTTCTCCACGCTCGACAGCCGATATCGAGCCATGA
GGTCTCCCCCCACTACATCGGCACCTTTCTAACCCCCCCCCTCCCGTCCT
CCCTCCCACTCTCCCTCCCCCCTCCCTCCCTCCCTTCAGGTGGCCGAGCC
TGGAATCAGGGTTAATCCCGGAGACACCGTCACGCTCGACAACAAGCGTG
TCGCCTGGGAAGCCCATGTCATCCTTCCCACTTCCTCCACCTCCCCCTCC
TCGTCCTCGTCCTCGTCCTCGTCCTCGTCATCCTCTCCTACGAAAGAGTT
GATCTACATCAAGTACTGGAAGCCGCGGTACGTCGTATTGGTCTCCAATC
CCTCTCCTTCCCCTCCCTCTCTCCCTCCATTCCTCCCTCCCTCCCTCCCT
CCCTCCTCCCCATCGGCGTGCCGCCCGTCACCCACCTCCCGCCTCCTATC
CCTCCCTCCCTCCCTCCCCCCAGGGGCGTGATCTGCACCACCGACGAGAC
CATCCCCGACAACATCATCTCCACGCTCGATTTCCCCCAACGGATCTTCC
CCGTGGGTCGCCTCGACAAGGAGAGCACAGGACTTATTCTATTGACAAAC
GACGGACGGGTGCCAAACGCCGTCCTCCGTTCTTCCCTCTTCCATCGTAA
GACCTACAAGGTACGCACGTCCTGCGTATCGTACCCCCCCCTTCCCTTCC
TTCCCTCGCTTGCCTCCCTTCCCTTCCCTCCTTGCATGCGAGATGCATAG
ACTTTCCCCCTTTATCTCTGGGCAATGAACAGCCTAGCCTTGTGGACTTG
ATCGGCGCCCTTCCCCCTCATTCCCTCCTTCCCCTTCCGTCGGACTTTGG
GGAGGGGCGTCCCATGAGATCAGCACCCTTCCAACCCTTCCCGCCCTCCC
TCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCAGGTACGAGTAGATC
AGCCCCTGACAGCTGACGACCTGCAGGCGTTGAGGGAGGGCATCGTTATC
AGCACCCCCGTCCAGCGGGACCGCATCGATCGTGTCCTGACGGCCAAGAC
TCTGCCGTGTGAGGTGTCCATGTTGTCATTAAGGAATACCGCGAAGAGTG
ATAATAATGGCAATCAGAACAATCAAAATGCTAATAAAAAGACTATCCAG
GAAAATAGCGCGGCGACTACCGACGATTCCGACCTTGCCTTCCTCCGTAA
TTCGCGGTATTCGAACAACATGCACTCCAACACACGTGCGTGTTTTACCA
TTACCCTGAGAGAAGGCCGAAACCGTCAAATTCGACGGATGTGCGAGGCC
CTCGGATTGCGTGTGTTGGAGCTGCACCGTGAGAGCGTCATGGGTATTGG
GCTCCAAGGGCTGCAAGGAGAGGGGTGGTGGGCGTACCTGACGGAGGAGG
AGGAGGAGAAGGTGAGCGAAGCGGTAGAGCAATGGGAGCGGAAGGAGGGG
GTTAGGTTGTCATCGGTGCAGGAAGAGGAGAGGAAGGAAGAGGAAGAGGA
GGAGGAGGAGGAGTAAGCGATCTATGGAGCTTCCCCTCTTCCCTTTCTTC
GCTATTTTTGAACAAAATTCATTCCTATTATCATTCCTCACCTGTGACCT
GTACCAATAATCTGATCAAGCCAGGCGGCGTCATCCAAGCTAAGTCCCAA
CGGCTAATTGAACTTTGACGTAACGGAGAGTCTCATATCATCAATTGAAT
AATCAATCTTACCGTTAGGATTTGTCACAAAGCACACACTCAAACCCTTG
TGTAGATATGAAATAATAGGCATCTTTTGACAATCACTTTGACCAGCCAT
CCGCCGAGAGAGAATACCAGGACATCTCCCACACGCATGTGCGTTTTTTG
GGAGTGAAAAAGGACCAGAAAGGACTCAAAAACCAAGATAAGGCCAGGCG
AGACAGACAGAGAGCGAACAATTCGATGAATACAAATGAAAAATATGATT
TAATTGAGGGGGAAATTCGTGCTCGGGTTCGGAACAAAATTATCATTGAG
CTTTTTTTGGAGGGGGTGGGTAGATTAAGAGTGTTGTTCGTTTGTCGTGC
TCGTGAGTGCCTTGCGTCAAGGATCCAGTTGAATTTCGTGTGTGTGTCCG
TGTCCTCTACGAGGGTGCTTCTGTTCTTTTGACTGCAGCTTTGAGCCCGA
GTCACAGATGCTCCCTGCACTCTCACTGTAGCAGCTTGTCTGGGACTTGG
CGGAAACAATGGCGGTGCGAGGTGCGATCAAGTCGGGCTTGATACGGCCA
TCTTTGATGCTAGGTCCGATGGAAGAGAGAAGAGAGAAGTAACGGACTAT
ACAGAAAGTTATGTAGTTTTTTTGCTCTTTTTACTTTTTTGGGGTTTTAA
CCA back to topCoding sequence (CDS) from alignment at scaffold_43:145164..148166+ >mRNA_10146 ID=mRNA_10146|Name=jgi.p|Nanoce1779_2|608985|organism=Nannochloropsis oceanica|type=CDS|length=4920bp|location=Sequence derived from alignment at scaffold_43:145164..148166+ (Nannochloropsis oceanica) ATGACAAGCGGAATACGGGTCAATAAATGCTTTGCCTCCTTTGCGTCTCG ACGTGAGGCGGACCGTCTCGTGGCCGCAGGCCGCGTCAAGATCAATGGCA AGGTGGCCGAGCCTGGAATCAGGGTTAATCCCGGAGACACCGTCACGCTC GACAACAAGCGTGTCGCCTGGGAAGCCCATGTCATCCTTCCCACTTCCTC CACCTCCCCCTCCTCGTCCTCGTCCTCGTCCTCGTCCTCGTCATCCTCTC CTACGAAAGAGTTGATCTACATCAAGTACTGGAAGCCGCGGGGCGTGATC TGCACCACCGACGAGACCATCCCCGACAACATCATCTCCACGCTCGATTT CCCCCAACGGATCTTCCCCGTGGGTCGCCTCGACAAGGAGAGCACAGGAC TTATTCTATTGACAAACGACGGACGGGTGCCAAACGCCGTCCTCCGTTCT TCCCTCTTCCATCGTAAGACCTACAAGGTACGAGTAGATCAGCCCCTGAC AGCTGACGACCTGCAGGCGTTGAGGGAGGGCATCGTTATCAGCACCCCCG TCCAGCGGGACCGCATCGATCGTGTCCTGACGGCCAAGACTCTGCCGTGT GAGGTGTCCATGTTGTCATTAAGGAATACCGCGAAGAGTGATAATAATGG CAATCAGAACAATCAAAATGCTAATAAAAAGACTATCCAGGAAAATAGCG CGGCGACTACCGACGATTCCGACCTTGCCTTCCTCCGTAATTCGCGGTAT TCGAACAACATGCACTCCAACACACGTGCGTGTTTTACCATTACCCTGAG AGAAGGCCGAAACCGTCAAATTCGACGGATGTGCGAGGCCCTCGGATTGC GTGTGTTGGAGCTGCACCGTGAGAGCGTCATGGGTATTGGGCTCCAAGGG CTGCAAGGAGAGGGGTGGTGGGCGTACCTGACGGAGGAGGAGGAGGAGAA GGCGGCGTCATCCAAGCTAAGTCCCAACGGCTAAATGACAAGCGGAATAC GGGTCAATAAATGCTTTGCCTCCTTTGCGTCTCGACGTGAGGCGGACCGT CTCGTGGCCGCAGGCCGCGTCAAGATCAATGGCAAGGTGGCCGAGCCTGG AATCAGGGTTAATCCCGGAGACACCGTCACGCTCGACAACAAGCGTGTCG CCTGGGAAGCCCATGTCATCCTTCCCACTTCCTCCACCTCCCCCTCCTCG TCCTCGTCCTCGTCCTCGTCCTCGTCATCCTCTCCTACGAAAGAGTTGAT CTACATCAAGTACTGGAAGCCGCGGGGCGTGATCTGCACCACCGACGAGA CCATCCCCGACAACATCATCTCCACGCTCGATTTCCCCCAACGGATCTTC CCCGTGGGTCGCCTCGACAAGGAGAGCACAGGACTTATTCTATTGACAAA CGACGGACGGGTGCCAAACGCCGTCCTCCGTTCTTCCCTCTTCCATCGTA AGACCTACAAGGTACGAGTAGATCAGCCCCTGACAGCTGACGACCTGCAG GCGTTGAGGGAGGGCATCGTTATCAGCACCCCCGTCCAGCGGGACCGCAT CGATCGTGTCCTGACGGCCAAGACTCTGCCGTGTGAGGTGTCCATGTTGT CATTAAGGAATACCGCGAAGAGTGATAATAATGGCAATCAGAACAATCAA AATGCTAATAAAAAGACTATCCAGGAAAATAGCGCGGCGACTACCGACGA TTCCGACCTTGCCTTCCTCCGTAATTCGCGGTATTCGAACAACATGCACT CCAACACACGTGCGTGTTTTACCATTACCCTGAGAGAAGGCCGAAACCGT CAAATTCGACGGATGTGCGAGGCCCTCGGATTGCGTGTGTTGGAGCTGCA CCGTGAGAGCGTCATGGGTATTGGGCTCCAAGGGCTGCAAGGAGAGGGGT GGTGGGCGTACCTGACGGAGGAGGAGGAGGAGAAGGCGGCGTCATCCAAG CTAAGTCCCAACGGCTAAATGACAAGCGGAATACGGGTCAATAAATGCTT TGCCTCCTTTGCGTCTCGACGTGAGGCGGACCGTCTCGTGGCCGCAGGCC GCGTCAAGATCAATGGCAAGGTGGCCGAGCCTGGAATCAGGGTTAATCCC GGAGACACCGTCACGCTCGACAACAAGCGTGTCGCCTGGGAAGCCCATGT CATCCTTCCCACTTCCTCCACCTCCCCCTCCTCGTCCTCGTCCTCGTCCT CGTCCTCGTCATCCTCTCCTACGAAAGAGTTGATCTACATCAAGTACTGG AAGCCGCGGGGCGTGATCTGCACCACCGACGAGACCATCCCCGACAACAT CATCTCCACGCTCGATTTCCCCCAACGGATCTTCCCCGTGGGTCGCCTCG ACAAGGAGAGCACAGGACTTATTCTATTGACAAACGACGGACGGGTGCCA AACGCCGTCCTCCGTTCTTCCCTCTTCCATCGTAAGACCTACAAGGTACG AGTAGATCAGCCCCTGACAGCTGACGACCTGCAGGCGTTGAGGGAGGGCA TCGTTATCAGCACCCCCGTCCAGCGGGACCGCATCGATCGTGTCCTGACG GCCAAGACTCTGCCGTGTGAGGTGTCCATGTTGTCATTAAGGAATACCGC GAAGAGTGATAATAATGGCAATCAGAACAATCAAAATGCTAATAAAAAGA CTATCCAGGAAAATAGCGCGGCGACTACCGACGATTCCGACCTTGCCTTC CTCCGTAATTCGCGGTATTCGAACAACATGCACTCCAACACACGTGCGTG TTTTACCATTACCCTGAGAGAAGGCCGAAACCGTCAAATTCGACGGATGT GCGAGGCCCTCGGATTGCGTGTGTTGGAGCTGCACCGTGAGAGCGTCATG GGTATTGGGCTCCAAGGGCTGCAAGGAGAGGGGTGGTGGGCGTACCTGAC GGAGGAGGAGGAGGAGAAGGCGGCGTCATCCAAGCTAAGTCCCAACGGCT AAATGACAAGCGGAATACGGGTCAATAAATGCTTTGCCTCCTTTGCGTCT CGACGTGAGGCGGACCGTCTCGTGGCCGCAGGCCGCGTCAAGATCAATGG CAAGGTGGCCGAGCCTGGAATCAGGGTTAATCCCGGAGACACCGTCACGC TCGACAACAAGCGTGTCGCCTGGGAAGCCCATGTCATCCTTCCCACTTCC TCCACCTCCCCCTCCTCGTCCTCGTCCTCGTCCTCGTCCTCGTCATCCTC TCCTACGAAAGAGTTGATCTACATCAAGTACTGGAAGCCGCGGGGCGTGA TCTGCACCACCGACGAGACCATCCCCGACAACATCATCTCCACGCTCGAT TTCCCCCAACGGATCTTCCCCGTGGGTCGCCTCGACAAGGAGAGCACAGG ACTTATTCTATTGACAAACGACGGACGGGTGCCAAACGCCGTCCTCCGTT CTTCCCTCTTCCATCGTAAGACCTACAAGGTACGAGTAGATCAGCCCCTG ACAGCTGACGACCTGCAGGCGTTGAGGGAGGGCATCGTTATCAGCACCCC CGTCCAGCGGGACCGCATCGATCGTGTCCTGACGGCCAAGACTCTGCCGT GTGAGGTGTCCATGTTGTCATTAAGGAATACCGCGAAGAGTGATAATAAT GGCAATCAGAACAATCAAAATGCTAATAAAAAGACTATCCAGGAAAATAG CGCGGCGACTACCGACGATTCCGACCTTGCCTTCCTCCGTAATTCGCGGT ATTCGAACAACATGCACTCCAACACACGTGCGTGTTTTACCATTACCCTG AGAGAAGGCCGAAACCGTCAAATTCGACGGATGTGCGAGGCCCTCGGATT GCGTGTGTTGGAGCTGCACCGTGAGAGCGTCATGGGTATTGGGCTCCAAG GGCTGCAAGGAGAGGGGTGGTGGGCGTACCTGACGGAGGAGGAGGAGGAG AAGGCGGCGTCATCCAAGCTAAGTCCCAACGGCTAAATGACAAGCGGAAT ACGGGTCAATAAATGCTTTGCCTCCTTTGCGTCTCGACGTGAGGCGGACC GTCTCGTGGCCGCAGGCCGCGTCAAGATCAATGGCAAGGTGGCCGAGCCT GGAATCAGGGTTAATCCCGGAGACACCGTCACGCTCGACAACAAGCGTGT CGCCTGGGAAGCCCATGTCATCCTTCCCACTTCCTCCACCTCCCCCTCCT CGTCCTCGTCCTCGTCCTCGTCCTCGTCATCCTCTCCTACGAAAGAGTTG ATCTACATCAAGTACTGGAAGCCGCGGGGCGTGATCTGCACCACCGACGA GACCATCCCCGACAACATCATCTCCACGCTCGATTTCCCCCAACGGATCT TCCCCGTGGGTCGCCTCGACAAGGAGAGCACAGGACTTATTCTATTGACA AACGACGGACGGGTGCCAAACGCCGTCCTCCGTTCTTCCCTCTTCCATCG TAAGACCTACAAGGTACGAGTAGATCAGCCCCTGACAGCTGACGACCTGC AGGCGTTGAGGGAGGGCATCGTTATCAGCACCCCCGTCCAGCGGGACCGC ATCGATCGTGTCCTGACGGCCAAGACTCTGCCGTGTGAGGTGTCCATGTT GTCATTAAGGAATACCGCGAAGAGTGATAATAATGGCAATCAGAACAATC AAAATGCTAATAAAAAGACTATCCAGGAAAATAGCGCGGCGACTACCGAC GATTCCGACCTTGCCTTCCTCCGTAATTCGCGGTATTCGAACAACATGCA CTCCAACACACGTGCGTGTTTTACCATTACCCTGAGAGAAGGCCGAAACC GTCAAATTCGACGGATGTGCGAGGCCCTCGGATTGCGTGTGTTGGAGCTG CACCGTGAGAGCGTCATGGGTATTGGGCTCCAAGGGCTGCAAGGAGAGGG GTGGTGGGCGTACCTGACGGAGGAGGAGGAGGAGAAGGCGGCGTCATCCA AGCTAAGTCCCAACGGCTAA back to top
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