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Properties
| Property Name | Value |
|---|
| TranscriptId | 609061 |
| Track | FilteredModels2 |
| ProteinId | 608975 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_43 | supercontig | scaffold_43:135075..138346 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10144 ID=mRNA_10144|Name=jgi.p|Nanoce1779_2|608975|organism=Nannochloropsis oceanica|type=mRNA|length=2314bp
GTCAAGTTGTGGGGGTCCTTTTATCCGGGCTGGCATCATAAATGTGCCTT
CCCTGTCTGTGTGTGGTTGTAAATGGGTGCAGGGGGGGGGGTGCGTGAGG
GAGGCCTCAAAAGGAAAGAGGACACTGGGCATTGACTCAGGCTCAAATGA
TGACGGCGTTGGCGAGGCAGGGGAATGGGGGAGGATGTTGCGCTGGTTGC
AGTGAAATATTACGGCTGATGAAAAGGCTATTTGCGATCTCTCTTGATGA
GTGTGCATTTTGTGGTTGAGGAGTGGTAACTGGGCTTCTGTGTGTTTTTT
GGGGGGCCTGCCGGTGGTGTGGTCTGTGGTCAATCAGTAGGCTGGGAAAG
GTGGGAGAAGAAACACACGCACGCCTCTAATGTTGCCCTTGGCCACGGCA
CACATCCTTGACCTCGAATAATCCACCCACCTGCACACGGATCACACATT
CAAAGACAGGTCGGTTTACAAACACTTATGCTAGCGCCGCGTCAAGAGGG
CTACGCTTGCTTCGACCCGCCATTATCTTGTATTATAGCCCTGTCTCTCC
GACAGTGTCCAAACGCGTCGTTGCTTGAGGTCACCATTCCCCCCCCCCTC
CTCTCATGCGGGATAGACGCACAACCGTCGCGTGATCACAAGATTCAATG
CTCCACGTGTTGTCATGATCATGTTGTTGTTGCTGTTGGTGTTGAGACCG
GGCTATGCAAACTAGATTCCTATTGAGCATTCCTCTCTCCCCTGGTTTCA
CACACATGCCACACATGCTTGCGTAATAAGCCTTGCCCAACCCACCCACC
ACTCTATGACACAACCAAACACAGCTCTATCAAAACATGCGGGTTACCGT
CCTTTTCATGTCGCTTTTGGCCTCCAGCAAGGCTTTTCTGGTCCCTACCC
CACTGCGTCGATCATTGACTGCTATGACCAGCAGCAGCAAGGACGACACT
GCTCCTTTCTCCATCCCCGCCTCCCTACCTTCCTTTCTCCCTAAGCTTGC
CATTGCCTCCCTCCTTTCTTCCTTCGTTCTTCCCTCCGCATTCATGCCCC
CTCTTCCTGCACTTGCCGATGGTGCGACGACCCGCTTTATTCTCCCGCCC
GTGGATATGAAAGACACACAAAGGTGTCAATTTAAGTCCTCCAATATGGG
CCAGGCCAATGCCGCCCGGGACAAGCTGTACGATTTGCGCTTCTGTGACA
TGAGCGGGAAAGATGCCGCTGGCTTTGATTTGTCGGGGGCCATAATGGCC
GAGGGCACTTTCACAGGCGTTAATTTCAAGGAAGCCGTGCTTAGCAAGGC
CTACGCCAAGAGTGCCAACTTTGAGAATGCAGATTTCAGTAACGCAGTGG
TGGATCGCGCGTCTTTTGATGGGTCCAAGATGAAGGGCTCCATTTTCAGC
AATGCCGTCTTGTCAGGCACCTCTTTCGCCGGCGCCGATTTGACAGACAG
CGATTTCACAGACACCTACATGGGCGAGTTTGATTTGAAAAATCTTTGCA
AGAACCCGACTTTGTCAGGGACCAACCCAAAGACGCAGGCGCCGACGAAG
GAGAGTGCGGGTTGCAAGTGAGGGAGGGAAAGAGGAAAGGAGGGGGGGAC
GGGGAAGGAAGAAGGGAGGCGTAGATGGGACACACATCATGGATGGTAGA
GCTTTGAATCGCGAGTGAATTCAAAGAGCAAAACAAAAGAAAAAGTGGCG
CGAAAAGAAGCCAGCGTCTCCGGAAGACATCTCTGAGCATTTTCATCAAC
CCCAGTCCTGGTTCCTCCTCCCTACAAAAAAGTATATTGCTGCTATTATT
TTCTTCGTTTCGTTGAGGAACTCTGTGGTACTTCGCTTGATGACGGGATC
TTTATGTCATTTGATTAAATGTATTGATTTTGATTTCTCGAACAAAACAA
AAACACTCGTAACAGCCAGTCAGGCGCCTTCAATTTTCGCGAAGGCAGCC
CCCAGCCCTTCACCTCAAAAACTTACTCGCTTTCAAATTTTGTCCGTTAC
TGTCATTATTATAAATCTGTTTTTTTAACCGCTGTATTTTCGCTTCATCT
TGTCTGTGTTTCTCTCGCATGTCGTATTTTTGGCCGGCTCCTCTAAAGGA
GAAGCACTTGCTGGTCCAACAACCGTAAACGGAGTGTCCTTCCTGCGCTC
CATCTTGATTGTTCATCCGTTTCTCTCATCCTCATCCGTTTCTCTCATCC
TCCTCCCTTCGCTCTTCCCATTCCTCCTCCTCTTCCTCTTCCTCCTCCTC
CACCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCTTCGCTCGATGGTACCA
CATGCTGCGAAGGC back to topprotein sequence of jgi.p|Nanoce1779_2|608975 >mRNA_10144-protein ID=mRNA_10144-protein|Name=jgi.p|Nanoce1779_2|608975|organism=Nannochloropsis oceanica|type=polypeptide|length=245bp
MRVTVLFMSLLASSKAFLVPTPLRRSLTAMTSSSKDDTAPFSIPASLPSF
LPKLAIASLLSSFVLPSAFMPPLPALADGATTRFILPPVDMKDTQRCQFK
SSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFTGVNFKEA
VLSKAYAKSANFENADFSNAVVDRASFDGSKMKGSIFSNAVLSGTSFAGA
DLTDSDFTDTYMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGCK* back to topmRNA from alignment at scaffold_43:135075..138346- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10144 ID=mRNA_10144|Name=jgi.p|Nanoce1779_2|608975|organism=Nannochloropsis oceanica|type=mRNA|length=3272bp|location=Sequence derived from alignment at scaffold_43:135075..138346- (Nannochloropsis oceanica)
GTCAAGTTGTGGGGGTCCTTTTATCCGGGCTGGCATCATAAATGTGCCTT
CCCTGTCTGTGTGTGGTTGTAAATGGGTGCAGGGGGGGGGGTGCGTGAGG
GAGGCCTCAAAAGGAAAGAGGACACTGGGCATTGACTCAGGCTCAAATGA
TGACGGCGTTGGCGAGGCAGGGGAATGGGGGAGGATGTTGCGCTGGTTGC
AGTGAAATATTACGGCTGATGAAAAGGCTATTTGCGATCTCTCTTGATGA
GTGTGCATTTTGTGGTTGAGGAGTGGTAACTGGGCTTCTGTGTGTTTTTT
GGGGGGCCTGCCGGTGGTGTGGTCTGTGGTCAATCAGTAGGCTGGGAAAG
GTGGGAGAAGAAACACACGCACGCCTCTAATGTTGCCCTTGGCCACGGCA
CACATCCTTGACCTCGAATAATCCACCCACCTGCACACGGATCACACATT
CAAAGACAGGTCGGTTTACAAACACTTATGCTAGCGCCGCGTCAAGAGGG
CTACGCTTGCTTCGACCCGCCATTATCTTGTATTATAGCCCTGTCTCTCC
GACAGTGTCCAAACGCGTCGTTGCTTGAGGTCACCATTCCCCCCCCCCTC
CTCTCATGCGGGATAGACGCACAACCGTCGCGTGATCACAAGATTCAATG
CTCCACGTGTTGTCATGATCATGTTGTTGTTGCTGTTGGTGTTGAGACCG
GGCTATGCAAACTAGATTCCTATTGAGCATTCCTCTCTCCCCTGGTTTCA
CACACATGCCACACATGCTTGCGTAATAAGCCTTGCCCAACCCACCCACC
ACTCTATGACACAACCAAACACAGCTCTATCAAAACATGCGGGTTACCGT
CCTTTTCATGTCGCTTTTGGCCTCCAGCAAGGCTTTTCTGGTCCCTACCC
CACTGCGTCGGTAAGTTGTTGTTCTGTGGTGGCCCCCTTTCCTTCCCCCC
CCCTCCTCCCCTCCCGTTGTTCCGTTTCGAAGACATTTCCCCACTCTTCC
ATTATCCCTCGTTCTCACTTGACCCTTTCCTATAGATCATTGACTGCTAT
GACCAGCAGCAGCAAGGACGACACTGCTCCTTTCTCCATCCCCGCCTCCC
TACCTTCCTTTCTCCCTAAGCTTGCCATTGCCTCCCTCCTTTCTTCCTTC
GTTCTTCCCTCCGCATTCATGCCCCCTCTTCCTGCACTTGCCGATGGTGC
GACGACCCGCTTTATTCTCCCGCCCGTGGATATGAAAGACACACAAAGGT
AGGGAGGGAGGAGAGGAGGGAGGGAGAGGAGGAGGGAGGGAGAGAAGGAG
GGAGGGGAGGAGGGAAGGTGATGGTGGTAGGCTGTATTCGTTGCTCCCGG
ATTCTCATATGATTTAATTTAATTTAAGAGTCGATGGTCTATCTATCACT
AACTTCTATATAATCACCATGACTCCGTCCCTCCCTGCCTCCCTCCGTCC
CCAGGTGTCAATTTAAGTCCTCCAATATGGGCCAGGCCAATGCCGCCCGG
GACAAGCTGTACGATTTGCGCTTCTGTGACATGAGGTGAAAATGGAGGGG
AGCGAAAAGAGGGAGAGAGGGAGGAAGAGCTTTGTAGATGCTCAAGACGA
CGGTGACTGTCGTTATGTGAAAGCAACAATCATCCTTTGCGGTTGCCCGA
GCCGCCATCCCTCCCTCATTCTTACTCATCCATCCAAACTACCCTCCCTT
CCTCCCTCCCTCCCTCCCTCCCTCCATACAGCGGGAAAGATGCCGCTGGC
TTTGATTTGTCGGGGGCCATAATGGCCGAGGGCACTTTCACAGGCGTTAA
TTTCAAGGAAGCCGTGCTTAGCAAGGCCTACGCCAAGGTACCTTGCCCTC
CCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTTCCTTCC
TCCATCCCTGCATTTAAAATACGTGTCGACCCAAAATATCGATTATCCAC
CTGCCGTCTTTGCTTTTCCCTGTCCGTCTTTCCCTCCCTCCTCCCTCCGT
CCCGCAGAGTGCCAACTTTGAGAATGCAGATTTCAGTAACGCAGTGGTGG
ATCGCGCGTCTTTTGATGGGTCCAAGATGAAGGTAGGAAAGGAGGGAGGG
AGGGAGGGAGGAAAGAATAGTGAGTGGGAGATATAGATGGACAACACTTA
TTTCTGATGCTCTGCATACACTGATTTGTTTACGTTCTTGATCTTTTTTT
AATTTATTGGTTTATAAACTCCAAAATGTTATGAGTTTATGTGTTTATGT
ATGTATTTTATCTTATCTTTTTTACGATTGAGTCAATACAATTCATCTAT
TTACTTGTTCGTTTCTTCTTCTTCACTTGGATGCACACTCCAGGGCTCCA
TTTTCAGCAATGCCGTCTTGTCAGGCACCTCTTTCGCCGGCGCCGATTTG
ACAGACAGCGATTTCACAGACACCTACATGGGCGAGTTTGATTTGAAAAA
TCTTTGCAAGAACCCGACTTTGTCAGGGACCAACCCAAAGACGCAGGCGC
CGACGAAGGAGAGTGCGGGTTGCAAGTGAGGGAGGGAAAGAGGAAAGGAG
GGGGGGACGGGGAAGGAAGAAGGGAGGCGTAGATGGGACACACATCATGG
ATGGTAGAGCTTTGAATCGCGAGTGAATTCAAAGAGCAAAACAAAAGAAA
AAGTGGCGCGAAAAGAAGCCAGCGTCTCCGGAAGACATCTCTGAGCATTT
TCATCAACCCCAGTCCTGGTTCCTCCTCCCTACAAAAAAGTATATTGCTG
CTATTATTTTCTTCGTTTCGTTGAGGAACTCTGTGGTACTTCGCTTGATG
ACGGGATCTTTATGTCATTTGATTAAATGTATTGATTTTGATTTCTCGAA
CAAAACAAAAACACTCGTAACAGCCAGTCAGGCGCCTTCAATTTTCGCGA
AGGCAGCCCCCAGCCCTTCACCTCAAAAACTTACTCGCTTTCAAATTTTG
TCCGTTACTGTCATTATTATAAATCTGTTTTTTTAACCGCTGTATTTTCG
CTTCATCTTGTCTGTGTTTCTCTCGCATGTCGTATTTTTGGCCGGCTCCT
CTAAAGGAGAAGCACTTGCTGGTCCAACAACCGTAAACGGAGTGTCCTTC
CTGCGCTCCATCTTGATTGTTCATCCGTTTCTCTCATCCTCATCCGTTTC
TCTCATCCTCCTCCCTTCGCTCTTCCCATTCCTCCTCCTCTTCCTCTTCC
TCCTCCTCCACCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCTTCGCTCGA
TGGTACCACATGCTGCGAAGGC back to topCoding sequence (CDS) from alignment at scaffold_43:135075..138346- >mRNA_10144 ID=mRNA_10144|Name=jgi.p|Nanoce1779_2|608975|organism=Nannochloropsis oceanica|type=CDS|length=4410bp|location=Sequence derived from alignment at scaffold_43:135075..138346- (Nannochloropsis oceanica)
GGCTCCATTTTCAGCAATGCCGTCTTGTCAGGCACCTCTTTCGCCGGCGC
CGATTTGACAGACAGCGATTTCACAGACACCTACATGGGCGAGTTTGATT
TGAAAAATCTTTGCAAGAACCCGACTTTGTCAGGGACCAACCCAAAGACG
CAGGCGCCGACGAAGGAGAGTGCGGGTTGCAAGTGAAGTGCCAACTTTGA
GAATGCAGATTTCAGTAACGCAGTGGTGGATCGCGCGTCTTTTGATGGGT
CCAAGATGAAGCGGGAAAGATGCCGCTGGCTTTGATTTGTCGGGGGCCAT
AATGGCCGAGGGCACTTTCACAGGCGTTAATTTCAAGGAAGCCGTGCTTA
GCAAGGCCTACGCCAAGGTGTCAATTTAAGTCCTCCAATATGGGCCAGGC
CAATGCCGCCCGGGACAAGCTGTACGATTTGCGCTTCTGTGACATGAGAT
CATTGACTGCTATGACCAGCAGCAGCAAGGACGACACTGCTCCTTTCTCC
ATCCCCGCCTCCCTACCTTCCTTTCTCCCTAAGCTTGCCATTGCCTCCCT
CCTTTCTTCCTTCGTTCTTCCCTCCGCATTCATGCCCCCTCTTCCTGCAC
TTGCCGATGGTGCGACGACCCGCTTTATTCTCCCGCCCGTGGATATGAAA
GACACACAAAGATGCGGGTTACCGTCCTTTTCATGTCGCTTTTGGCCTCC
AGCAAGGCTTTTCTGGTCCCTACCCCACTGCGTCGGGCTCCATTTTCAGC
AATGCCGTCTTGTCAGGCACCTCTTTCGCCGGCGCCGATTTGACAGACAG
CGATTTCACAGACACCTACATGGGCGAGTTTGATTTGAAAAATCTTTGCA
AGAACCCGACTTTGTCAGGGACCAACCCAAAGACGCAGGCGCCGACGAAG
GAGAGTGCGGGTTGCAAGTGAAGTGCCAACTTTGAGAATGCAGATTTCAG
TAACGCAGTGGTGGATCGCGCGTCTTTTGATGGGTCCAAGATGAAGCGGG
AAAGATGCCGCTGGCTTTGATTTGTCGGGGGCCATAATGGCCGAGGGCAC
TTTCACAGGCGTTAATTTCAAGGAAGCCGTGCTTAGCAAGGCCTACGCCA
AGGTGTCAATTTAAGTCCTCCAATATGGGCCAGGCCAATGCCGCCCGGGA
CAAGCTGTACGATTTGCGCTTCTGTGACATGAGATCATTGACTGCTATGA
CCAGCAGCAGCAAGGACGACACTGCTCCTTTCTCCATCCCCGCCTCCCTA
CCTTCCTTTCTCCCTAAGCTTGCCATTGCCTCCCTCCTTTCTTCCTTCGT
TCTTCCCTCCGCATTCATGCCCCCTCTTCCTGCACTTGCCGATGGTGCGA
CGACCCGCTTTATTCTCCCGCCCGTGGATATGAAAGACACACAAAGATGC
GGGTTACCGTCCTTTTCATGTCGCTTTTGGCCTCCAGCAAGGCTTTTCTG
GTCCCTACCCCACTGCGTCGGGCTCCATTTTCAGCAATGCCGTCTTGTCA
GGCACCTCTTTCGCCGGCGCCGATTTGACAGACAGCGATTTCACAGACAC
CTACATGGGCGAGTTTGATTTGAAAAATCTTTGCAAGAACCCGACTTTGT
CAGGGACCAACCCAAAGACGCAGGCGCCGACGAAGGAGAGTGCGGGTTGC
AAGTGAAGTGCCAACTTTGAGAATGCAGATTTCAGTAACGCAGTGGTGGA
TCGCGCGTCTTTTGATGGGTCCAAGATGAAGCGGGAAAGATGCCGCTGGC
TTTGATTTGTCGGGGGCCATAATGGCCGAGGGCACTTTCACAGGCGTTAA
TTTCAAGGAAGCCGTGCTTAGCAAGGCCTACGCCAAGGTGTCAATTTAAG
TCCTCCAATATGGGCCAGGCCAATGCCGCCCGGGACAAGCTGTACGATTT
GCGCTTCTGTGACATGAGATCATTGACTGCTATGACCAGCAGCAGCAAGG
ACGACACTGCTCCTTTCTCCATCCCCGCCTCCCTACCTTCCTTTCTCCCT
AAGCTTGCCATTGCCTCCCTCCTTTCTTCCTTCGTTCTTCCCTCCGCATT
CATGCCCCCTCTTCCTGCACTTGCCGATGGTGCGACGACCCGCTTTATTC
TCCCGCCCGTGGATATGAAAGACACACAAAGATGCGGGTTACCGTCCTTT
TCATGTCGCTTTTGGCCTCCAGCAAGGCTTTTCTGGTCCCTACCCCACTG
CGTCGGGCTCCATTTTCAGCAATGCCGTCTTGTCAGGCACCTCTTTCGCC
GGCGCCGATTTGACAGACAGCGATTTCACAGACACCTACATGGGCGAGTT
TGATTTGAAAAATCTTTGCAAGAACCCGACTTTGTCAGGGACCAACCCAA
AGACGCAGGCGCCGACGAAGGAGAGTGCGGGTTGCAAGTGAAGTGCCAAC
TTTGAGAATGCAGATTTCAGTAACGCAGTGGTGGATCGCGCGTCTTTTGA
TGGGTCCAAGATGAAGCGGGAAAGATGCCGCTGGCTTTGATTTGTCGGGG
GCCATAATGGCCGAGGGCACTTTCACAGGCGTTAATTTCAAGGAAGCCGT
GCTTAGCAAGGCCTACGCCAAGGTGTCAATTTAAGTCCTCCAATATGGGC
CAGGCCAATGCCGCCCGGGACAAGCTGTACGATTTGCGCTTCTGTGACAT
GAGATCATTGACTGCTATGACCAGCAGCAGCAAGGACGACACTGCTCCTT
TCTCCATCCCCGCCTCCCTACCTTCCTTTCTCCCTAAGCTTGCCATTGCC
TCCCTCCTTTCTTCCTTCGTTCTTCCCTCCGCATTCATGCCCCCTCTTCC
TGCACTTGCCGATGGTGCGACGACCCGCTTTATTCTCCCGCCCGTGGATA
TGAAAGACACACAAAGATGCGGGTTACCGTCCTTTTCATGTCGCTTTTGG
CCTCCAGCAAGGCTTTTCTGGTCCCTACCCCACTGCGTCGGGCTCCATTT
TCAGCAATGCCGTCTTGTCAGGCACCTCTTTCGCCGGCGCCGATTTGACA
GACAGCGATTTCACAGACACCTACATGGGCGAGTTTGATTTGAAAAATCT
TTGCAAGAACCCGACTTTGTCAGGGACCAACCCAAAGACGCAGGCGCCGA
CGAAGGAGAGTGCGGGTTGCAAGTGAAGTGCCAACTTTGAGAATGCAGAT
TTCAGTAACGCAGTGGTGGATCGCGCGTCTTTTGATGGGTCCAAGATGAA
GCGGGAAAGATGCCGCTGGCTTTGATTTGTCGGGGGCCATAATGGCCGAG
GGCACTTTCACAGGCGTTAATTTCAAGGAAGCCGTGCTTAGCAAGGCCTA
CGCCAAGGTGTCAATTTAAGTCCTCCAATATGGGCCAGGCCAATGCCGCC
CGGGACAAGCTGTACGATTTGCGCTTCTGTGACATGAGATCATTGACTGC
TATGACCAGCAGCAGCAAGGACGACACTGCTCCTTTCTCCATCCCCGCCT
CCCTACCTTCCTTTCTCCCTAAGCTTGCCATTGCCTCCCTCCTTTCTTCC
TTCGTTCTTCCCTCCGCATTCATGCCCCCTCTTCCTGCACTTGCCGATGG
TGCGACGACCCGCTTTATTCTCCCGCCCGTGGATATGAAAGACACACAAA
GATGCGGGTTACCGTCCTTTTCATGTCGCTTTTGGCCTCCAGCAAGGCTT
TTCTGGTCCCTACCCCACTGCGTCGGGCTCCATTTTCAGCAATGCCGTCT
TGTCAGGCACCTCTTTCGCCGGCGCCGATTTGACAGACAGCGATTTCACA
GACACCTACATGGGCGAGTTTGATTTGAAAAATCTTTGCAAGAACCCGAC
TTTGTCAGGGACCAACCCAAAGACGCAGGCGCCGACGAAGGAGAGTGCGG
GTTGCAAGTGAAGTGCCAACTTTGAGAATGCAGATTTCAGTAACGCAGTG
GTGGATCGCGCGTCTTTTGATGGGTCCAAGATGAAGCGGGAAAGATGCCG
CTGGCTTTGATTTGTCGGGGGCCATAATGGCCGAGGGCACTTTCACAGGC
GTTAATTTCAAGGAAGCCGTGCTTAGCAAGGCCTACGCCAAGGTGTCAAT
TTAAGTCCTCCAATATGGGCCAGGCCAATGCCGCCCGGGACAAGCTGTAC
GATTTGCGCTTCTGTGACATGAGATCATTGACTGCTATGACCAGCAGCAG
CAAGGACGACACTGCTCCTTTCTCCATCCCCGCCTCCCTACCTTCCTTTC
TCCCTAAGCTTGCCATTGCCTCCCTCCTTTCTTCCTTCGTTCTTCCCTCC
GCATTCATGCCCCCTCTTCCTGCACTTGCCGATGGTGCGACGACCCGCTT
TATTCTCCCGCCCGTGGATATGAAAGACACACAAAGATGCGGGTTACCGT
CCTTTTCATGTCGCTTTTGGCCTCCAGCAAGGCTTTTCTGGTCCCTACCC
CACTGCGTCG back to top
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