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Properties
Property Name | Value |
TranscriptId | 311222 |
Track | FilteredModels2 |
ProteinId | 311136 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_43 | supercontig | scaffold_43:130703..131869 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10142 ID=mRNA_10142|Name=jgi.p|Nanoce1779_2|311136|organism=Nannochloropsis oceanica|type=mRNA|length=1167bp GTTTTACTTTGCATCGGGGAGACCCCGGCATGGCCCACGGCCTAACAGCG GCCATTCTCGTTGAAATTTATCCTCCTCGTCCTACTACCATTCCCTCCTC TCCGTCGCTGTTCGGTAACTTGCCGTCCATGCACTGGTATTTGATTACCA TGAGATTCTTCACCGTTTCTTCGTGAATTCCCTGTCTGAGCAGTCCGCAC TGAGAGAAAGACGCACTCCGCACCAGGAGTGGAGCGAATGTGCGCTGTTA TCCACAAGAAACGAGGGTATTGGATTTTCCTGTATCCCTTGGCCCACAAC CCCAGGGGGGCCACGTCGTAGTCGGATCTGAAGACCATGAGCTACCTGTC CAGCTCCAAGAAGGCAAATTCTTGTGCTCGGCCAAAGTCAACTTCGGGTC TTGTTCACCGCCTCCCTCCCCCATAGATGTGGACACACCTTCAGCAGCAG CTTTTTTTCTGTCCCGAGTTTGCTCAATTTCTACCGCACGTAGTTTTACA GGCTTTTTAGCACCGACTTCCCTGCAATGGCGCAGTGCCCACTCTCTTCC TCCTCACCACGTCCTTATTCCTTGTCTTTTCTCCATCTCCTTCCCCTTGT CTTTCTCTTCTCCGCGCTGCGAACACAGCACAGAATTCGTCAGTATGATC ACATTGGCTGCCATGGCGCTTATGGCATTATGAATGCCATCATGATACTT GGGATGGTAGGACGCGATAGTGGCCAAGTGGCGCTTGGTGGGGTCGTTGT AGGCCGCGTAGTGGAACCCGTTGATGCTTTTCTTATAAATATAATTACCG TGACAGAAGCGTCTCTGTATCATGACCAAGAAAGCCGCGTGCATTACCCT CACTTCTTCATGCATAACCTCCATTTCGATTGCCACGGCCTGCTCCGTCC TCCTCCTCCGAAAGCTTGTCCGCCTTCTTCTCCTTCCTCTCCGCATCTAC CCCCTTCTCCTCCTCCAATTCAAAATCTGAGTTTAGCACTTCATCCTTTG TACTTGAAAACTGGAAGTGGCGCAGCGGGATGAGGTCGATCATTTCTGCT TCTTCACTGCTCGAGCTGGAGACCTCCTCTCTAGTCACCCGGGAGGGAGA AGAATGGCCTGCACACGCTGCCGCTGTTGCCATGGCTTTATCAGTTGTAG TCTTTGGTATATGATTT back to topprotein sequence of jgi.p|Nanoce1779_2|311136 >mRNA_10142-protein ID=mRNA_10142-protein|Name=jgi.p|Nanoce1779_2|311136|organism=Nannochloropsis oceanica|type=polypeptide|length=169bp MAQCPLSSSSPRPYSLSFLHLLPLVFLFSALRTQHRIRQYDHIGCHGAYG IMNAIMILGMVGRDSGQVALGGVVVGRVVEPVDAFLINIITVTEASLYHD QESRVHYPHFFMHNLHFDCHGLLRPPPPKACPPSSPSSPHLPPSPPPIQN LSLALHPLYLKTGSGAAG* back to topmRNA from alignment at scaffold_43:130703..131869+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10142 ID=mRNA_10142|Name=jgi.p|Nanoce1779_2|311136|organism=Nannochloropsis oceanica|type=mRNA|length=1167bp|location=Sequence derived from alignment at scaffold_43:130703..131869+ (Nannochloropsis oceanica) GTTTTACTTTGCATCGGGGAGACCCCGGCATGGCCCACGGCCTAACAGCG
GCCATTCTCGTTGAAATTTATCCTCCTCGTCCTACTACCATTCCCTCCTC
TCCGTCGCTGTTCGGTAACTTGCCGTCCATGCACTGGTATTTGATTACCA
TGAGATTCTTCACCGTTTCTTCGTGAATTCCCTGTCTGAGCAGTCCGCAC
TGAGAGAAAGACGCACTCCGCACCAGGAGTGGAGCGAATGTGCGCTGTTA
TCCACAAGAAACGAGGGTATTGGATTTTCCTGTATCCCTTGGCCCACAAC
CCCAGGGGGGCCACGTCGTAGTCGGATCTGAAGACCATGAGCTACCTGTC
CAGCTCCAAGAAGGCAAATTCTTGTGCTCGGCCAAAGTCAACTTCGGGTC
TTGTTCACCGCCTCCCTCCCCCATAGATGTGGACACACCTTCAGCAGCAG
CTTTTTTTCTGTCCCGAGTTTGCTCAATTTCTACCGCACGTAGTTTTACA
GGCTTTTTAGCACCGACTTCCCTGCAATGGCGCAGTGCCCACTCTCTTCC
TCCTCACCACGTCCTTATTCCTTGTCTTTTCTCCATCTCCTTCCCCTTGT
CTTTCTCTTCTCCGCGCTGCGAACACAGCACAGAATTCGTCAGTATGATC
ACATTGGCTGCCATGGCGCTTATGGCATTATGAATGCCATCATGATACTT
GGGATGGTAGGACGCGATAGTGGCCAAGTGGCGCTTGGTGGGGTCGTTGT
AGGCCGCGTAGTGGAACCCGTTGATGCTTTTCTTATAAATATAATTACCG
TGACAGAAGCGTCTCTGTATCATGACCAAGAAAGCCGCGTGCATTACCCT
CACTTCTTCATGCATAACCTCCATTTCGATTGCCACGGCCTGCTCCGTCC
TCCTCCTCCGAAAGCTTGTCCGCCTTCTTCTCCTTCCTCTCCGCATCTAC
CCCCTTCTCCTCCTCCAATTCAAAATCTGAGTTTAGCACTTCATCCTTTG
TACTTGAAAACTGGAAGTGGCGCAGCGGGATGAGGTCGATCATTTCTGCT
TCTTCACTGCTCGAGCTGGAGACCTCCTCTCTAGTCACCCGGGAGGGAGA
AGAATGGCCTGCACACGCTGCCGCTGTTGCCATGGCTTTATCAGTTGTAG
TCTTTGGTATATGATTT back to topCoding sequence (CDS) from alignment at scaffold_43:130703..131869+ >mRNA_10142 ID=mRNA_10142|Name=jgi.p|Nanoce1779_2|311136|organism=Nannochloropsis oceanica|type=CDS|length=507bp|location=Sequence derived from alignment at scaffold_43:130703..131869+ (Nannochloropsis oceanica) ATGGCGCAGTGCCCACTCTCTTCCTCCTCACCACGTCCTTATTCCTTGTC TTTTCTCCATCTCCTTCCCCTTGTCTTTCTCTTCTCCGCGCTGCGAACAC AGCACAGAATTCGTCAGTATGATCACATTGGCTGCCATGGCGCTTATGGC ATTATGAATGCCATCATGATACTTGGGATGGTAGGACGCGATAGTGGCCA AGTGGCGCTTGGTGGGGTCGTTGTAGGCCGCGTAGTGGAACCCGTTGATG CTTTTCTTATAAATATAATTACCGTGACAGAAGCGTCTCTGTATCATGAC CAAGAAAGCCGCGTGCATTACCCTCACTTCTTCATGCATAACCTCCATTT CGATTGCCACGGCCTGCTCCGTCCTCCTCCTCCGAAAGCTTGTCCGCCTT CTTCTCCTTCCTCTCCGCATCTACCCCCTTCTCCTCCTCCAATTCAAAAT CTGAGTTTAGCACTTCATCCTTTGTACTTGAAAACTGGAAGTGGCGCAGC GGGATGA back to top
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