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Properties
| Property Name | Value |
|---|
| TranscriptId | 608985 |
| Track | FilteredModels2 |
| ProteinId | 608899 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_43 | supercontig | scaffold_43:100699..104286 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10133 ID=mRNA_10133|Name=jgi.p|Nanoce1779_2|608899|organism=Nannochloropsis oceanica|type=mRNA|length=2193bp
GGGCGGTATTGCATCCTCTTTGTACCGGTTTAGCGTCTCTTTGCTCGGCA
TGGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGAGAACGAGGAAGGG
AGAGAGGAAAGGGGGAAGCAGCATTCTTCCCCTCCCTTGAACAAGAGGGT
GACGGATCCGCTGCTGCTGCCGGCGTCAAACCCCTATTTTGGGAGCACCG
AGTCTCTCCTTCCATCCTACCCGGATTTACGCAAGCAAGCTGGCCTGGCC
TGCGTCTACACCACGCCTCCTCTCGTCTTGACACGGGCTCGGACCCCTTT
CGCGCCTTGCCAGCAGCTGACGTACCGCTTTCGATTGGCCCTACCTGCGC
ACCTCCTTCCCTCCTACAATCGAGGCACAGGCGCCCGTTTCTTCTACATG
TGTACGGTGGCCGTCGGCGGGCAAGGGCAAGAACGGCCCATGCGCTACAT
CCACATTCCCTTTACTGTCCTCTCCTCGGGCTTCATGGACCTCCCCATGC
CCCCTTCAAATTACGTGGCTGTGGGTTTCCTCGAGGGGGAAGAAGTTCAC
TCCCGGCTAATCGGAGAAGAAGAAAGGAGAGAGATTTACGGGGAAGGCGG
TAACGACCAGGACGAAGGCGAGCGTGGATTTTGCTGGAGGCGCTTCTCAG
CCAAGTATCTACGGAATGCCAACGAGGAGGTCATCCCTCACAACTACCAC
GATGACTCTGACAATGAGGAGGAGGAGGAATGGAAGGATGATCGCAACGA
CGTCTACATGGCGGGGCTGACCTTCCGCCCTTCCTCCCTCCCACCCTCGT
CCTCCCTCCCGTCCTCGCCGGCCAGAAGAGGAGGCCCTGCATGCACGATT
TATGCTATCCGAAACGGGACCGCTAATTTAGGTTTGGGGGGCAGGGAAGG
AGGGAGGGAGGGACGAGGGGAAAAGGGAGCCAGAAAGGGAGGAATAGACA
GGCTCCTCTCTTGCGTACACTTACTTTCTGCTAACGATATCCTTTTATGC
TTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCCTTCCCTTCCT
CTTGCGCAAGGCAAGTTTGTGACGTACTCACAGGCGTATCGGCCAGGGGC
TCCATTTGATGGAGTCTTCGACTTCTCGGATGGGATCCTGCGGTGTTACC
AGATATCTGCATGCATGGTCCGCGAAGAGTGGACTTATCACGCTCAACCC
ACACAGCGCAAGTTGTTGGCGCGCACAGTCGAAGATACTTTCCACGAACT
CACTGCATCGTGTTTGTCGTGCGCGGTCTTTCTCAAGGTCCCTATCGATG
CCTCTCCTACTTTTTCCACGCCGTTTACGTGCTTGGAATGGAAAGTGTGC
TTCGAGTTTGTCACTAGCAAGGAAGAGGACGCTCTGCGCGAAGCAGCGCT
CATCGAAGAAGAGAAGCAGGCAAGGATCGAGGAGCTTCGCGACCTCCTAC
TTTCTTCCACCTCTGACAATGAGACGGAAACGGAAGATGATACTTTGATT
TTGGAAGAGACGGAGGTCGTGGACGAAGACGAGGGAGGAGAAGGGCAACC
TAGGAAAAGTGGATGTCCCGAGACGGTGACTGCTCTCCATACCTCCAAGC
TGCGGTGGACATTTCCCATTCGCGTGATCCCGCCGAATGACACGGATCCA
ACTGACTTATTTTTGGATTATCATGTGGCTCGCTGCTCGATGGAAATGCA
TATTTAGTGGGGAGGATGGAAAGGCGAGGAGGGGAGAGTTACTTGAATGA
TGAATCAAAACGAAATGGTATTTTTGACACGTGCTGAAAGAATTTCTTTG
AGAGTGGAGCATGTGGTCCTTTGCTGCCGACTGGGCAAATAAAAGAGGTC
TCTGGACGTAAATGTTACTCTTGTAAACGCCTTTTATTGGATACGGGCTG
ATCGGAACATATCGATGTTTTCTTTTTTTTTTTACTTATAGAGGACGGGC
CTGCATCAGAGCCGCACAAGCCCCGAGGTGCCGGAATGCATAAGATTATA
TCGCCGTGATCAAGAGATTGTGTTGCACAGTACAGTGTCGGCCTGCTTCA
GCACTCGCCGTATGAAGCCCTCCCGAGGGTGCCCTCTGATGAAAAAAGGT
TGACTTGGTCGGTTTTGAACACCTTGTGATGCCGTCTGCTTCCGCCAAGC
AGAGTTTGGAAAGTTTTGATAGCACTTAATCTACTACTGATGT back to topprotein sequence of jgi.p|Nanoce1779_2|608899 >mRNA_10133-protein ID=mRNA_10133-protein|Name=jgi.p|Nanoce1779_2|608899|organism=Nannochloropsis oceanica|type=polypeptide|length=237bp
MLPSLPPFLPPSLLPSLPLAQGKFVTYSQAYRPGAPFDGVFDFSDGILRC
YQISACMVREEWTYHAQPTQRKLLARTVEDTFHELTASCLSCAVFLKVPI
DASPTFSTPFTCLEWKVCFEFVTSKEEDALREAALIEEEKQARIEELRDL
LLSSTSDNETETEDDTLILEETEVVDEDEGGEGQPRKSGCPETVTALHTS
KLRWTFPIRVIPPNDTDPTDLFLDYHVARCSMEMHI* back to topmRNA from alignment at scaffold_43:100699..104286+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10133 ID=mRNA_10133|Name=jgi.p|Nanoce1779_2|608899|organism=Nannochloropsis oceanica|type=mRNA|length=3588bp|location=Sequence derived from alignment at scaffold_43:100699..104286+ (Nannochloropsis oceanica)
GGGCGGTATTGCATCCTCTTTGTACCGGTTTAGCGTCTCTTTGCTCGGCA
TGGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGAGAACGAGGAAGGG
AGAGAGGAAAGGGGGAAGCAGCATTCTTCCCCTCCCTTGAACAAGAGGGT
GACGGATCCGCTGCTGCTGCCGGCGTCAAACCCCTATTTTGGGAGCACCG
AGGTAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGCGGGATGGAGGGAG
GGAGGGACGGGTATGAACGGTCCTGGCCTTATTACTTCCTTCCTTCCTCC
TCTCGTCCCTCCTTCCCTCCCTCAGTCTCTCCTTCCATCCTACCCGGATT
TACGCAAGCAAGCTGGCCTGGCCTGCGTCTACACCACGCCTCCTCTCGTC
TTGACACGGGCTCGGACCCCTTTCGCGCCTTGCCAGCAGCTGACGTACCG
CTTTCGATTGGCCCTACCTGCGCACCTCCTTCCCTCCTACAATCGAGGTA
GGCGTTGGGTTTGTTATCTGTTTCCAGCTTCTTTTTTCCTTTTTCTCTTT
CTTTTTCTTGTCCTGTTCGTCGTCTCGACGCAGTTTGGCACTAACTTCCT
CCCTCCCTCCCTCCCTTCCCAGGCACAGGCGCCCGTTTCTTCTACATGTG
TACGGTGGCCGTCGGCGGGCAAGGGCAAGAACGGCCCATGCGCTACATCC
ACATTCCCTTTACTGTCCTCTCCTCGGGCTTCATGGGTACGTCCTCCCGC
CCTCCCGCCCTCCCGTCCTCCCTCCCTCCTTCCTTCCACCCCGTCTCCGC
CTCACCGATATCCATTCCCTCCCTCCCGCCCTCCTTCCCTCTTTCCCCCC
CTCCCTCCCCTCCTCCCTCCAGACCTCCCCATGCCCCCTTCAAATTACGT
GGCTGTGGGTTTCCTCGAGGGGGAAGAAGTTCACTCCCGGCTAATCGGAG
AAGAAGAAAGGAGAGAGATTTACGGGGAAGGTAGAGAAGGAAGGAGGGAG
AGAGGGGGGGAGGGAGGACCGATAGATTCCGTCCTGTGTCAACTGTAATT
TTAAATACCCCCCTGATTTCTACCTCCAACGACAATCCGTTAATAAACAG
GCGGTAACGACCAGGACGAAGGCGAGCGTGGATTTTGCTGGAGGCGCTTC
TCAGCCAAGGTACGAAAAATATCCCTACCCTCCTTCCCTCCCTTCCTCCT
TCCTTCCTTGCCATTTTTCCCTCCCTCCATTCCTCCCGGCTTTGCACCGA
CTGATCCTCTCTCCCCCCCGCAGTATCTACGGAATGCCAACGAGGAGGTC
ATCCCTCACAACTACCACGATGACTCTGACAATGAGGAGGAGGAGGAATG
GAAGGATGATCGGTAAGAAAAGAGGAAGGGAGGGAGGAAGGGAAGAAGAG
AGGGAGGAAAGCCGTGATATCGATAGGAGGGGAGACAGAAGAGGAGAAGC
AGATAGGATAATTCTAATATTTTTTCTTTCTTTTCCTCCCTCCCTCCCTC
CCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCCACTTCTCCAGC
AACGACGTCTACATGGCGGGGCTGACCTTCCGCCCTTCCTCCCTCCCACC
CTCGTCCTCCCTCCCGTCCTCGCCGGCCAGAAGAGGAGGCCCTGCATGCA
CGATTTATGCTATCCGAAACGGGACCGCTAATTTAGGTTTGGGGGGCAGG
GAAGGAGGGAGGGAGGGACGAGGGGAAAAGGGAGCCAGAAAGGGAGGAAT
AGACAGGCTCCTCTCTTGCGTACACTTACTTTCTGCTAACGATATCCTTT
TATGCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCCTTCCC
TTCCTCTTGCGCAAGGCAAGTTTGTGACGTACTCACAGGCGTATCGGCCA
GGGGCTCCATTTGATGGAGTCTTCGACTTCTCGGATGGGATCCTGCGGTG
TTACCAGGTAGGGATAACGCGAAGCAGGGAGAGAGTGAGGGAGGGAGGGA
GGGGATGCGGGACGAGAGGCCGATTGGTTCTCTGTCATTCTGCTCTCTCC
TAGGTTTCTGTGCATCGAGCTCGAGAAATATGACTCTATCAAGGATCTGC
TTGTCCAATACAAATTATTGCGTAGCACAAATATTTTCCTTTGTTCCTCC
TCTATGTCTCTTCCTCCTCTTCCCCCCGTCTGATCGCTTATGCGTGTCAG
GTCCACGAGGAGAGGACCTTGTCACACTCGGCCGGCCGTCGCGCACACAC
CTCGGGGAATACACTCTTTTATCACTTCACCCTTCACTCTTTTATCACTT
CAACCTTCTCACCCCGTTTTCTCCTTGCCCTCATTCATTTTCCAGATATC
TGCATGCATGGTCCGCGAAGAGTGGACTTATCACGCTCAACCCACACAGC
GCAAGTTGTTGGCGCGCACAGTCGAAGATACTTTCCACGAACTCACTGCA
TCGTGTTTGTCGTGCGCGGTCTTTCTCAAGGTACGACCAGGGAGGCTAAC
CAAGGTGTAATGGTCATGGATGGGTTTCCAAAGCAGAAACAGAAAGTAAA
GACTGAGGAAATAGTTGTCACAGGGTAGAATAATGAGGGGACGATGGATA
CGCGTGCAATGCATGGGAATAGACCTCGATGTCACCCATTTATCTACTGA
CTCCTCGTTCCCTCCCCCTCTTAATCATACAGGTCCCTATCGATGCCTCT
CCTACTTTTTCCACGCCGTTTACGTGCTTGGAATGGAAAGTGTGCTTCGA
GTTTGTCACTAGCAAGGAAGAGGACGCTCTGCGCGAAGCAGCGCTCATCG
AAGAAGAGAAGCAGGCAAGGATCGAGGAGCTTCGCGACCTCCTACTTTCT
TCCACCTCTGACAATGAGACGGAAACGGAAGATGATACTTTGATTTTGGA
AGAGACGGAGGTCGTGGACGAAGACGAGGGAGGAGAAGGGCAACCTAGGA
AAAGTGGATGTCCCGAGACGGTGACTGCTCTCCATACCTCCAAGCTGCGG
TGGACATTTCCCATTCGCGTGATCCCGCCGAATGACACGGATCCAACTGA
CTTATTTTTGGATTATCATGTGGCTCGCTGCTCGATGGAAATGCATATTT
AGTGGGGAGGATGGAAAGGCGAGGAGGGGAGAGTTACTTGAATGATGAAT
CAAAACGAAATGGTATTTTTGACACGTGCTGAAAGAATTTCTTTGAGAGT
GGAGCATGTGGTCCTTTGCTGCCGACTGGGCAAATAAAAGAGGTCTCTGG
ACGTAAATGTTACTCTTGTAAACGCCTTTTATTGGATACGGGCTGATCGG
AACATATCGATGTTTTCTTTTTTTTTTTACTTATAGAGGACGGGCCTGCA
TCAGAGCCGCACAAGCCCCGAGGTGCCGGAATGCATAAGATTATATCGCC
GTGATCAAGAGATTGTGTTGCACAGTACAGTGTCGGCCTGCTTCAGCACT
CGCCGTATGAAGCCCTCCCGAGGGTGCCCTCTGATGAAAAAAGGTTGACT
TGGTCGGTTTTGAACACCTTGTGATGCCGTCTGCTTCCGCCAAGCAGAGT
TTGGAAAGTTTTGATAGCACTTAATCTACTACTGATGT back to topCoding sequence (CDS) from alignment at scaffold_43:100699..104286+ >mRNA_10133 ID=mRNA_10133|Name=jgi.p|Nanoce1779_2|608899|organism=Nannochloropsis oceanica|type=CDS|length=2133bp|location=Sequence derived from alignment at scaffold_43:100699..104286+ (Nannochloropsis oceanica)
ATGCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCCTTCCCT
TCCTCTTGCGCAAGGCAAGTTTGTGACGTACTCACAGGCGTATCGGCCAG
GGGCTCCATTTGATGGAGTCTTCGACTTCTCGGATGGGATCCTGCGGTGT
TACCAGATATCTGCATGCATGGTCCGCGAAGAGTGGACTTATCACGCTCA
ACCCACACAGCGCAAGTTGTTGGCGCGCACAGTCGAAGATACTTTCCACG
AACTCACTGCATCGTGTTTGTCGTGCGCGGTCTTTCTCAAGGTCCCTATC
GATGCCTCTCCTACTTTTTCCACGCCGTTTACGTGCTTGGAATGGAAAGT
GTGCTTCGAGTTTGTCACTAGCAAGGAAGAGGACGCTCTGCGCGAAGCAG
CGCTCATCGAAGAAGAGAAGCAGGCAAGGATCGAGGAGCTTCGCGACCTC
CTACTTTCTTCCACCTCTGACAATGAGACGGAAACGGAAGATGATACTTT
GATTTTGGAAGAGACGGAGGTCGTGGACGAAGACGAGGGAGGAGAAGGGC
AACCTAGGAAAAGTGGATGTCCCGAGACGGTGACTGCTCTCCATACCTCC
AAGCTGCGGTGGACATTTCCCATTCGCGTGATCCCGCCGAATGACACGGA
TCCAACTGACTTATTTTTGGATTATCATGTGGCTCGCTGCTCGATGGAAA
TGCATATTTAGATGCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTC
CTTCCTTCCCTTCCTCTTGCGCAAGGCAAGTTTGTGACGTACTCACAGGC
GTATCGGCCAGGGGCTCCATTTGATGGAGTCTTCGACTTCTCGGATGGGA
TCCTGCGGTGTTACCAGATATCTGCATGCATGGTCCGCGAAGAGTGGACT
TATCACGCTCAACCCACACAGCGCAAGTTGTTGGCGCGCACAGTCGAAGA
TACTTTCCACGAACTCACTGCATCGTGTTTGTCGTGCGCGGTCTTTCTCA
AGGTCCCTATCGATGCCTCTCCTACTTTTTCCACGCCGTTTACGTGCTTG
GAATGGAAAGTGTGCTTCGAGTTTGTCACTAGCAAGGAAGAGGACGCTCT
GCGCGAAGCAGCGCTCATCGAAGAAGAGAAGCAGGCAAGGATCGAGGAGC
TTCGCGACCTCCTACTTTCTTCCACCTCTGACAATGAGACGGAAACGGAA
GATGATACTTTGATTTTGGAAGAGACGGAGGTCGTGGACGAAGACGAGGG
AGGAGAAGGGCAACCTAGGAAAAGTGGATGTCCCGAGACGGTGACTGCTC
TCCATACCTCCAAGCTGCGGTGGACATTTCCCATTCGCGTGATCCCGCCG
AATGACACGGATCCAACTGACTTATTTTTGGATTATCATGTGGCTCGCTG
CTCGATGGAAATGCATATTTAGATGCTTCCCTCCCTCCCTCCCTTCCTCC
CTCCCTCCCTCCTTCCTTCCCTTCCTCTTGCGCAAGGCAAGTTTGTGACG
TACTCACAGGCGTATCGGCCAGGGGCTCCATTTGATGGAGTCTTCGACTT
CTCGGATGGGATCCTGCGGTGTTACCAGATATCTGCATGCATGGTCCGCG
AAGAGTGGACTTATCACGCTCAACCCACACAGCGCAAGTTGTTGGCGCGC
ACAGTCGAAGATACTTTCCACGAACTCACTGCATCGTGTTTGTCGTGCGC
GGTCTTTCTCAAGGTCCCTATCGATGCCTCTCCTACTTTTTCCACGCCGT
TTACGTGCTTGGAATGGAAAGTGTGCTTCGAGTTTGTCACTAGCAAGGAA
GAGGACGCTCTGCGCGAAGCAGCGCTCATCGAAGAAGAGAAGCAGGCAAG
GATCGAGGAGCTTCGCGACCTCCTACTTTCTTCCACCTCTGACAATGAGA
CGGAAACGGAAGATGATACTTTGATTTTGGAAGAGACGGAGGTCGTGGAC
GAAGACGAGGGAGGAGAAGGGCAACCTAGGAAAAGTGGATGTCCCGAGAC
GGTGACTGCTCTCCATACCTCCAAGCTGCGGTGGACATTTCCCATTCGCG
TGATCCCGCCGAATGACACGGATCCAACTGACTTATTTTTGGATTATCAT
GTGGCTCGCTGCTCGATGGAAATGCATATTTAG back to top
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