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Properties
| Property Name | Value |
|---|
| TranscriptId | 575114 |
| Track | FilteredModels2 |
| ProteinId | 575028 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1015822..1017326 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1013 ID=mRNA_1013|Name=jgi.p|Nanoce1779_2|575028|organism=Nannochloropsis oceanica|type=mRNA|length=1505bp
GAATTAACGGGCATCAAGGGCACCATTTCAAGCCCCTTAACCACACGGAG
ACATGGGCTTGATGGAAGGCGGAACACCTAAGGAGCCTGGGCCCATCTGA
TTTCATAAAAGAAACCTCCCGCCCCTTGCGACAATGCCTCAAAATCCCAC
ACCACACTGCGCAACACAGGCTTCGCACACAGCACACCCCGTAATCAAGG
TCATTGATGAGCCGTGGAAGCCATGGCTTTGATCATGGAACTTGCAGTCG
TTAAGTAATTGTCTTCCCGGTACACTGTCTTTCAGCCACAGCCACAGCCA
CAGCCATAGCACACAAGTATGCGAGCATGTCCAGCACTGCGGCAGTAATT
GCTACCCTGGAAGCCGCCGTGCAGCGGGACGAGGGTAAACGAGGCTTGAC
TGACCTGGTGCTGCCAGCGGGCGAGCTGGAGACGGCTGCCAGTGCTCTCT
ACCATGCCCCAGGCCCCATCGCCATCCTCACCGGATTCCCCTGCATGCTC
GACCACATCCCGCCCACCGAGACAGATGGCCCACCAGGCGCATTAGCCAT
TATCCAAGCTTGTCTTGCGCTCAACAAACCTTGCATTCTATTGGTTGAGG
AAAGCAATGCTGCCGTGCTTAGTGCTGGCGTGGCCGCTGTCGAGGACATG
TCAGTCAATCTGCGCGTAGAGGTCTTTCCACCCAAAACAAAGTGGGGACC
GACTGAAGACGCCCGCCTTTGCCAGCTTGCTCAAGAAATTACTTTCGTGG
TGGCCATCGAGCGGACGGGCCCGGGAGCTAGCGATGGGCATTACTATACG
ATGCGCGGAAAACAAATGGATGAGGTGGTGGCTCCCCTGGAACGATTGCT
GGATTTAGTGCCGGAGTCTGTGCACAGCATCGGCATCGGAGACGGAGGAA
ATGAAGTAGGGATGGGCAAAGTTTTGGACCGAATATTGGCTTCAACAATC
ATATCAAAGGCGAGGCAGATTGCGTGTTGCACAAGCACGTCGTGGTTGCT
GGCGGCCTCGGTCAGTAATTGGGGTGGATACGCTTTATGCTGCGCACTGG
CAGCAGTGGCAGCAGAAGTAGAAGCAACATATACAACTGCCAAGAGGGGG
AAAGATGGAGATAAGATCAAGACTGACTGCATGTCTAACGCTAAAGGCAT
GAGAAACCCGGCAAATGATGGGATGGGCAGAAGAAGGGGGAAATGGGTAG
AGCGGTTGGTAGTATCCGAGGCACAAGATCAAAGAGTGCTTGAGGCGATT
GTGGCAGCAGGGGCTAGGGATGGAATCACCGGAGAGAGAAAAGAATGGGT
GGATGGGATGCCGAAAGAGACCTCTTCGGCTATGCTGCGAGAGCTGCGGG
AGATTGCGAGGAGCAATTAGATGTAAATGTACAATTGGTTGTGGATGAAG
ATTGACGCTCTCCTTTTCAGAATCAACATAACTTCAGAGCAGCTGCTGTG
CCCTTATTCCGATAAAGAAATCTGTTTCCTCTCTCTCTCTCTTCTCTCTC
TCTCT back to topprotein sequence of jgi.p|Nanoce1779_2|575028 >mRNA_1013-protein ID=mRNA_1013-protein|Name=jgi.p|Nanoce1779_2|575028|organism=Nannochloropsis oceanica|type=polypeptide|length=348bp
MSSTAAVIATLEAAVQRDEGKRGLTDLVLPAGELETAASALYHAPGPIAI
LTGFPCMLDHIPPTETDGPPGALAIIQACLALNKPCILLVEESNAAVLSA
GVAAVEDMSVNLRVEVFPPKTKWGPTEDARLCQLAQEITFVVAIERTGPG
ASDGHYYTMRGKQMDEVVAPLERLLDLVPESVHSIGIGDGGNEVGMGKVL
DRILASTIISKARQIACCTSTSWLLAASVSNWGGYALCCALAAVAAEVEA
TYTTAKRGKDGDKIKTDCMSNAKGMRNPANDGMGRRRGKWVERLVVSEAQ
DQRVLEAIVAAGARDGITGERKEWVDGMPKETSSAMLRELREIARSN* back to topmRNA from alignment at scaffold_2:1015822..1017326- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1013 ID=mRNA_1013|Name=jgi.p|Nanoce1779_2|575028|organism=Nannochloropsis oceanica|type=mRNA|length=1505bp|location=Sequence derived from alignment at scaffold_2:1015822..1017326- (Nannochloropsis oceanica)
GAATTAACGGGCATCAAGGGCACCATTTCAAGCCCCTTAACCACACGGAG
ACATGGGCTTGATGGAAGGCGGAACACCTAAGGAGCCTGGGCCCATCTGA
TTTCATAAAAGAAACCTCCCGCCCCTTGCGACAATGCCTCAAAATCCCAC
ACCACACTGCGCAACACAGGCTTCGCACACAGCACACCCCGTAATCAAGG
TCATTGATGAGCCGTGGAAGCCATGGCTTTGATCATGGAACTTGCAGTCG
TTAAGTAATTGTCTTCCCGGTACACTGTCTTTCAGCCACAGCCACAGCCA
CAGCCATAGCACACAAGTATGCGAGCATGTCCAGCACTGCGGCAGTAATT
GCTACCCTGGAAGCCGCCGTGCAGCGGGACGAGGGTAAACGAGGCTTGAC
TGACCTGGTGCTGCCAGCGGGCGAGCTGGAGACGGCTGCCAGTGCTCTCT
ACCATGCCCCAGGCCCCATCGCCATCCTCACCGGATTCCCCTGCATGCTC
GACCACATCCCGCCCACCGAGACAGATGGCCCACCAGGCGCATTAGCCAT
TATCCAAGCTTGTCTTGCGCTCAACAAACCTTGCATTCTATTGGTTGAGG
AAAGCAATGCTGCCGTGCTTAGTGCTGGCGTGGCCGCTGTCGAGGACATG
TCAGTCAATCTGCGCGTAGAGGTCTTTCCACCCAAAACAAAGTGGGGACC
GACTGAAGACGCCCGCCTTTGCCAGCTTGCTCAAGAAATTACTTTCGTGG
TGGCCATCGAGCGGACGGGCCCGGGAGCTAGCGATGGGCATTACTATACG
ATGCGCGGAAAACAAATGGATGAGGTGGTGGCTCCCCTGGAACGATTGCT
GGATTTAGTGCCGGAGTCTGTGCACAGCATCGGCATCGGAGACGGAGGAA
ATGAAGTAGGGATGGGCAAAGTTTTGGACCGAATATTGGCTTCAACAATC
ATATCAAAGGCGAGGCAGATTGCGTGTTGCACAAGCACGTCGTGGTTGCT
GGCGGCCTCGGTCAGTAATTGGGGTGGATACGCTTTATGCTGCGCACTGG
CAGCAGTGGCAGCAGAAGTAGAAGCAACATATACAACTGCCAAGAGGGGG
AAAGATGGAGATAAGATCAAGACTGACTGCATGTCTAACGCTAAAGGCAT
GAGAAACCCGGCAAATGATGGGATGGGCAGAAGAAGGGGGAAATGGGTAG
AGCGGTTGGTAGTATCCGAGGCACAAGATCAAAGAGTGCTTGAGGCGATT
GTGGCAGCAGGGGCTAGGGATGGAATCACCGGAGAGAGAAAAGAATGGGT
GGATGGGATGCCGAAAGAGACCTCTTCGGCTATGCTGCGAGAGCTGCGGG
AGATTGCGAGGAGCAATTAGATGTAAATGTACAATTGGTTGTGGATGAAG
ATTGACGCTCTCCTTTTCAGAATCAACATAACTTCAGAGCAGCTGCTGTG
CCCTTATTCCGATAAAGAAATCTGTTTCCTCTCTCTCTCTCTTCTCTCTC
TCTCT back to topCoding sequence (CDS) from alignment at scaffold_2:1015822..1017326- >mRNA_1013 ID=mRNA_1013|Name=jgi.p|Nanoce1779_2|575028|organism=Nannochloropsis oceanica|type=CDS|length=1044bp|location=Sequence derived from alignment at scaffold_2:1015822..1017326- (Nannochloropsis oceanica)
ATGTCCAGCACTGCGGCAGTAATTGCTACCCTGGAAGCCGCCGTGCAGCG
GGACGAGGGTAAACGAGGCTTGACTGACCTGGTGCTGCCAGCGGGCGAGC
TGGAGACGGCTGCCAGTGCTCTCTACCATGCCCCAGGCCCCATCGCCATC
CTCACCGGATTCCCCTGCATGCTCGACCACATCCCGCCCACCGAGACAGA
TGGCCCACCAGGCGCATTAGCCATTATCCAAGCTTGTCTTGCGCTCAACA
AACCTTGCATTCTATTGGTTGAGGAAAGCAATGCTGCCGTGCTTAGTGCT
GGCGTGGCCGCTGTCGAGGACATGTCAGTCAATCTGCGCGTAGAGGTCTT
TCCACCCAAAACAAAGTGGGGACCGACTGAAGACGCCCGCCTTTGCCAGC
TTGCTCAAGAAATTACTTTCGTGGTGGCCATCGAGCGGACGGGCCCGGGA
GCTAGCGATGGGCATTACTATACGATGCGCGGAAAACAAATGGATGAGGT
GGTGGCTCCCCTGGAACGATTGCTGGATTTAGTGCCGGAGTCTGTGCACA
GCATCGGCATCGGAGACGGAGGAAATGAAGTAGGGATGGGCAAAGTTTTG
GACCGAATATTGGCTTCAACAATCATATCAAAGGCGAGGCAGATTGCGTG
TTGCACAAGCACGTCGTGGTTGCTGGCGGCCTCGGTCAGTAATTGGGGTG
GATACGCTTTATGCTGCGCACTGGCAGCAGTGGCAGCAGAAGTAGAAGCA
ACATATACAACTGCCAAGAGGGGGAAAGATGGAGATAAGATCAAGACTGA
CTGCATGTCTAACGCTAAAGGCATGAGAAACCCGGCAAATGATGGGATGG
GCAGAAGAAGGGGGAAATGGGTAGAGCGGTTGGTAGTATCCGAGGCACAA
GATCAAAGAGTGCTTGAGGCGATTGTGGCAGCAGGGGCTAGGGATGGAAT
CACCGGAGAGAGAAAAGAATGGGTGGATGGGATGCCGAAAGAGACCTCTT
CGGCTATGCTGCGAGAGCTGCGGGAGATTGCGAGGAGCAATTAG back to top
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