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Properties
| Property Name | Value |
|---|
| TranscriptId | 608911 |
| Track | FilteredModels2 |
| ProteinId | 608825 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_43 | supercontig | scaffold_43:46258..47684 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10120 ID=mRNA_10120|Name=jgi.p|Nanoce1779_2|608825|organism=Nannochloropsis oceanica|type=mRNA|length=786bp
TCCCTCCCTCTTTAGATACTCCACTTCAAGGAGAATCCCACAGTGCTCTT
CCTCCGCAGCGAAACCCTGACTGCTCGGCAGGAGGCGGAGGGCCTCAAGA
AACAAGTCGCAGCTCTCCAGCAGCAGCTGCAGCAGCAACAGCAGCAGCAC
ATGTCGATGTCCTCTGCCTCCTCGCTGGGCGGGGACGAGAGTGGGGGAGG
AGGAGGAGGGGGAGGGCTTGGAGTGAGCATGATGATGGTGGGCGAGACAG
TGGACTCGAGCAAGTACCATCAGCGCCTCAAGGAGGCCTTCAAGCAGCGG
ATCAACCTCTTCCGCGACTGCTGCTACCAGCTGACGGGCTACATGATCAC
CCTTTCCACAGACCGAGAGTTTCCCCAAGTGACCCTCCGCTCCATGTACG
CCGAGAGCCAGGAGGATTGCCTCCTCTTCCAATGGCGGGGCGAGACGTTG
GAAATGCTCGAAACGGCCTTTACCAAACACAAGCTCCGCGCATCCCTTTT
GGACACCCTCCGCCGCTACAACTCCCTCCCTCTTTTTCTGGCAGGCATAA
CACAGGAGCTGTTTGAGACAAGCACCATGCACTGATGAAGTCCAGTGATG
GGGAGGGAGGAGAGAGGGAGGGTTGCGGATTGGCACGCGATGATGACGTT
TTTTGGGTGCCACGAGGAGGGAGAGGAGGGGGAGGGGGCGGAGGAGGAGA
AGGAAAAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGTTGGCAAGAGATGA
CAGCCAAATGAGTAGAGACGATGTTTCTCCGTACAC back to topprotein sequence of jgi.p|Nanoce1779_2|608825 >mRNA_10120-protein ID=mRNA_10120-protein|Name=jgi.p|Nanoce1779_2|608825|organism=Nannochloropsis oceanica|type=polypeptide|length=145bp
MSMSSASSLGGDESGGGGGGGGLGVSMMMVGETVDSSKYHQRLKEAFKQR
INLFRDCCYQLTGYMITLSTDREFPQVTLRSMYAESQEDCLLFQWRGETL
EMLETAFTKHKLRASLLDTLRRYNSLPLFLAGITQELFETSTMH* back to topmRNA from alignment at scaffold_43:46258..47684+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10120 ID=mRNA_10120|Name=jgi.p|Nanoce1779_2|608825|organism=Nannochloropsis oceanica|type=mRNA|length=1427bp|location=Sequence derived from alignment at scaffold_43:46258..47684+ (Nannochloropsis oceanica)
TCCCTCCCTCTTTAGATACTCCACTTCAAGGAGAATCCCACAGTGCTCTT
CCTCCGCAGCGAAACCCTGACTGCTCGGCAGGAGGCGGAGGGCCTCAAGG
TACGTCTGCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAACCTCTG
GCTTGGTAGGGAGGTTTCGGCCAACTCCCCCCCTCCCTCCCTCCCTCCCT
TATTCCCTCCCTCCCTCCCTTCCTCACCCACCCTGGCAGAAACAAGTCGC
AGCTCTCCAGCAGCAGCTGCAGCAGCAACAGCAGCAGCACATGTCGATGT
CCTCTGCCTCCTCGCTGGGCGGGGACGAGAGTGGGGGAGGAGGAGGAGGG
GGAGGGCTTGGAGTGAGCATGATGATGGTGGGCGAGACAGGTAGGTTTGA
GGAAAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAAAGG
GACAGACGGAAGGTTGTTGTGATCTCCACTTGGATGCGCGCTCGACCACA
AACTCTTCCCTCTTTTCCTCCCTCCCTCCCTCCCTCCAGTGGACTCGAGC
AAGTACCATCAGCGCCTCAAGGAGGCCTTCAAGCAGCGGATCAACCTCTT
CCGCGACTGCTGCTACCAGCTGACGGGCTACATGATCACCCTTTCCACAG
ACCGAGAGGTACTTGTCTTCCCTCCCTCCCTCCCTCCTTTCCCTAAGGTT
GCACGGTTACTCTCGTGACAGATCGAGAGGGACGTGCGCTCCTTCCCTCC
CTCCCTCGCTCCCTCCCTCCCTCCCTCCTTTCAGTTTCTATATTCTGCCG
GGAATCAAGAAGATTGCTTCCTCCCCATCCTCCCTCCCCCCCTTCCTCCC
TCCCTCCCTCTCCCTCTCCAGTTTCCCCAAGTGACCCTCCGCTCCATGTA
CGCCGAGAGCCAGGAGGATTGCCTCCTCTTCCAATGGCGGGGCGAGACGT
TGGAAATGCTCGAAACGGCCTTTACCAAACACAAGCTCCGCGCAGTAGGT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTGCTCACATCTCC
ATCTACTCTCCTACCTGCTGGGCCGCGTCAACTCACCCTTCCTTCCGTCC
CTCCCTCTTTCCCTCCCTCCCTCCCTCCCACAGTCCCTTTTGGACACCCT
CCGCCGCTACAACTCCCTCCCTCTTTTTCTGGCAGGCATAACACAGGAGC
TGTTTGAGACAAGCACCATGCACTGATGAAGTCCAGTGATGGGGAGGGAG
GAGAGAGGGAGGGTTGCGGATTGGCACGCGATGATGACGTTTTTTGGGTG
CCACGAGGAGGGAGAGGAGGGGGAGGGGGCGGAGGAGGAGAAGGAAAAGG
AGGAGGAAGAGGAGGAGGAGGAGGAGGTTGGCAAGAGATGACAGCCAAAT
GAGTAGAGACGATGTTTCTCCGTACAC back to topCoding sequence (CDS) from alignment at scaffold_43:46258..47684+ >mRNA_10120 ID=mRNA_10120|Name=jgi.p|Nanoce1779_2|608825|organism=Nannochloropsis oceanica|type=CDS|length=1740bp|location=Sequence derived from alignment at scaffold_43:46258..47684+ (Nannochloropsis oceanica)
ATGTCGATGTCCTCTGCCTCCTCGCTGGGCGGGGACGAGAGTGGGGGAGG
AGGAGGAGGGGGAGGGCTTGGAGTGAGCATGATGATGGTGGGCGAGACAG
TGGACTCGAGCAAGTACCATCAGCGCCTCAAGGAGGCCTTCAAGCAGCGG
ATCAACCTCTTCCGCGACTGCTGCTACCAGCTGACGGGCTACATGATCAC
CCTTTCCACAGACCGAGAGTTTCCCCAAGTGACCCTCCGCTCCATGTACG
CCGAGAGCCAGGAGGATTGCCTCCTCTTCCAATGGCGGGGCGAGACGTTG
GAAATGCTCGAAACGGCCTTTACCAAACACAAGCTCCGCGCATCCCTTTT
GGACACCCTCCGCCGCTACAACTCCCTCCCTCTTTTTCTGGCAGGCATAA
CACAGGAGCTGTTTGAGACAAGCACCATGCACTGAATGTCGATGTCCTCT
GCCTCCTCGCTGGGCGGGGACGAGAGTGGGGGAGGAGGAGGAGGGGGAGG
GCTTGGAGTGAGCATGATGATGGTGGGCGAGACAGTGGACTCGAGCAAGT
ACCATCAGCGCCTCAAGGAGGCCTTCAAGCAGCGGATCAACCTCTTCCGC
GACTGCTGCTACCAGCTGACGGGCTACATGATCACCCTTTCCACAGACCG
AGAGTTTCCCCAAGTGACCCTCCGCTCCATGTACGCCGAGAGCCAGGAGG
ATTGCCTCCTCTTCCAATGGCGGGGCGAGACGTTGGAAATGCTCGAAACG
GCCTTTACCAAACACAAGCTCCGCGCATCCCTTTTGGACACCCTCCGCCG
CTACAACTCCCTCCCTCTTTTTCTGGCAGGCATAACACAGGAGCTGTTTG
AGACAAGCACCATGCACTGAATGTCGATGTCCTCTGCCTCCTCGCTGGGC
GGGGACGAGAGTGGGGGAGGAGGAGGAGGGGGAGGGCTTGGAGTGAGCAT
GATGATGGTGGGCGAGACAGTGGACTCGAGCAAGTACCATCAGCGCCTCA
AGGAGGCCTTCAAGCAGCGGATCAACCTCTTCCGCGACTGCTGCTACCAG
CTGACGGGCTACATGATCACCCTTTCCACAGACCGAGAGTTTCCCCAAGT
GACCCTCCGCTCCATGTACGCCGAGAGCCAGGAGGATTGCCTCCTCTTCC
AATGGCGGGGCGAGACGTTGGAAATGCTCGAAACGGCCTTTACCAAACAC
AAGCTCCGCGCATCCCTTTTGGACACCCTCCGCCGCTACAACTCCCTCCC
TCTTTTTCTGGCAGGCATAACACAGGAGCTGTTTGAGACAAGCACCATGC
ACTGAATGTCGATGTCCTCTGCCTCCTCGCTGGGCGGGGACGAGAGTGGG
GGAGGAGGAGGAGGGGGAGGGCTTGGAGTGAGCATGATGATGGTGGGCGA
GACAGTGGACTCGAGCAAGTACCATCAGCGCCTCAAGGAGGCCTTCAAGC
AGCGGATCAACCTCTTCCGCGACTGCTGCTACCAGCTGACGGGCTACATG
ATCACCCTTTCCACAGACCGAGAGTTTCCCCAAGTGACCCTCCGCTCCAT
GTACGCCGAGAGCCAGGAGGATTGCCTCCTCTTCCAATGGCGGGGCGAGA
CGTTGGAAATGCTCGAAACGGCCTTTACCAAACACAAGCTCCGCGCATCC
CTTTTGGACACCCTCCGCCGCTACAACTCCCTCCCTCTTTTTCTGGCAGG
CATAACACAGGAGCTGTTTGAGACAAGCACCATGCACTGA back to top
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