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Properties
| Property Name | Value |
|---|
| TranscriptId | 608838 |
| Track | FilteredModels2 |
| ProteinId | 608752 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_42 | supercontig | scaffold_42:175941..177886 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10052 ID=mRNA_10052|Name=jgi.p|Nanoce1779_2|608752|organism=Nannochloropsis oceanica|type=mRNA|length=888bp
CAGCTACAAGGCTCATTCAGTATTCAAACAACCATGCGCATTTTTCTTCC
CCTCGCCCTCTTTGCCGCCATGGCCCTGACTTTTACCGCCGCCGTGGAAG
ACCCCCAGCAAGACACTTCCGCCGCTCCTGCTGCCCCGGCTACTTCTGAC
ACGCCCGTGGACCCTGCTGCTGTCCCTGAGGTCCCTGCAACGCCTGCAGC
TACGACATCCACCGCGTCTGAGGCCCGCCCTCATAAATCAGACGACCCCA
AGCTGCGAGGAACTGAGCCTGAGGATGCCCTGCCTGCCCCGGCTCCGGTC
GAGAAGGATATAGGTCCCGACGGCACCAAGCTCAAGATGTTGATCAATTG
CTTTGCCTGGTATCTGCCCGATGCTGCCTATCGAGGAGACAATAGCAAGG
TCCACGGGTGCGACGAATCGACCATTCAGTTCTGCAAGACGGATAGCGGG
AACAACGACCACATGTGCAAATTCGACGGCTCCAATCACTTGCGGGATGC
TCGGGGCGAAAATCCCGCCTGCTACTTCAATTGCCAGGTAAAGCCATCAC
CGTCTTCCCTTCCTTCGCTCTTTTCCTCCATCACCGTCTTCCCTTCCTTC
CTTCCTTCGCTCTTTTCCTCCTCATTCCTTTCGTCTTAACCCTTTCCCCG
CTGCTTTTGCCCCTCCCTCCCTTTCTGCCTCCCCCCCTCCTCGTCGTTCT
CCCCCTCCCTAGATGGAGACCTGTGACAGCTGGGGAAGTCCCTCCACAGA
TGCCACCAGAGCCTGTGTCGCCGCTTTAGGCCATTAGAAAAAATATGAGA
CTGGAAGGAGAGCAGGAGGGAGGGAGGGAGGGAGGAAGGGAGGCTGGTGC
ATTAGTCTTCGTGAGCGCGAGAATTTAAAGGAAGACAC back to topprotein sequence of jgi.p|Nanoce1779_2|608752 >mRNA_10052-protein ID=mRNA_10052-protein|Name=jgi.p|Nanoce1779_2|608752|organism=Nannochloropsis oceanica|type=polypeptide|length=202bp
MRIFLPLALFAAMALTFTAAVEDPQQDTSAAPAAPATSDTPVDPAAVPEV
PATPAATTSTASEARPHKSDDPKLRGTEPEDALPAPAPVEKDIGPDGTKL
KMLINCFAWYLPDAAYRGDNSKVHGCDESTIQFCKTDSGNNDHMCKFDGS
NHLRDARGENPACYFNCQVKPSPSSLPSLFSSITVFPSFLPSLFSSSFLS
S* back to topmRNA from alignment at scaffold_42:175941..177886- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10052 ID=mRNA_10052|Name=jgi.p|Nanoce1779_2|608752|organism=Nannochloropsis oceanica|type=mRNA|length=1946bp|location=Sequence derived from alignment at scaffold_42:175941..177886- (Nannochloropsis oceanica)
CAGCTACAAGGCTCATTCAGTATTCAAACAACCATGCGCATTTTTCTTCC
CCTCGCCCTCTTTGCCGCCATGGCCCTGACTTTTACCGCCGCCGTGGAAG
ACCCCCAGCAAGACACTTCCGCCGCTCCTGCTGCCCCGGCTACTTCTGAC
ACGCCCGTGGACCCTGCTGCTGTCCCTGAGGTCCCTGCAACGCCTGCAGG
TGAGCTCATTCCTACATCAATCATTTCTTTATCCCCTCAACATCGTCCAT
TCATATATACTCCTGTATTTTATTCAAATCTGCTCGTACATTTGCCTGTG
TCTGCTGGCATCAATTTCCTCCGCTTAAAGCTGTCGATCCATCCCTCCAC
ATCAGCGGTCCCTGCGACATCTGTGGGTACACCATGAGTGACATGGATGA
AATAGATTGAGAGGGATCAACAAACGGGGGGTTAGTCCGTAGAAAATGCC
AACTTGCAGGGAATTAATGTATCCCTCCCTCCCTTCCTTCCTTCCTCCCT
CTCCCCCTCCCTCCCTTTCTCGTGTCTGTTGTTCCCGAAATCCCAGCTAC
GACATCCACCGCGTCTGAGGCCCGCCCTCATAAATCAGACGACCCCAAGC
TGCGAGGAACTGAGCCTGAGGGTGAGTTGAAGGGGGGAAGAGAGCGAGGG
GGGGGCAGCGAGGGAAGGAGGGAAGGAATGTGACTGCGTCTGGGGCACTT
ATATTCTTAGAGTGGCATCTTCTCCCCCTTTGGCCTATGTGCCGTGTTGT
TGCATTGGCAACTGCCCTTGGTTATGATCCATCCTGTAATACCTTCCTTC
CTTGCACATAACTCCCTCCCTCCCTAGATGCCCTGCCTGCCCCGGCTCCG
GTCGAGAAGGATATAGGTCCCGACGGCACCAAGCTCAAGATGTTGATCAA
TTGCTTTGCCTGGTAATAGATCGAGGGAAGGGAGGAGGGAGGGAAGTTTG
GAGGGTAAGAGAGAGGAGAGAGAATTTTCCCTCGTGCTGAAATGAGAGAT
GCGTCCTCTACATGCACCCCTTATACCTACCTGTCCCTCCCTGCCTCCCT
CTACCCTCCCTCCCTCCCCTTTTCCTTTCTTTCCAAGGTATCTGCCCGAT
GCTGCCTATCGAGGAGACAATAGCAAGGTCCACGGGTGCGACGAATCGAC
CATTCAGGTGAGTCCTCTTCCTTCCCTCCCTCCCTCCCTCCCTCCCCTTC
TCGCTACCTTCCTACCCTACCCACTCCCATCTTCCGATCCATAAAAAATG
TCTCAGTCGTCCCCTCCCTCCGTCCTCTTCCCCCTCCTTCGATCCCTCCT
CCCCTCCCTCCCTCCCTCCCTCATCAGTTCTGCAAGACGGATAGCGGGAA
CAACGACCACATGTGCAAATTCGACGGCTCCAATCACTTGCGGGTGAGGG
CGGGAGAGCGGGAGGGAGGAAGGAAGGGAGGGAGGGAGGGATTGAGTTGT
CGTCATTCGCTCATCCTTCATTCCCTCCCTCCCTCCCCTCCTCACTCCCT
CTCCCGCAGGATGCTCGGGGCGAAAATCCCGCCTGCTACTTCAATTGCCA
GGTAAAGCCATCACCGTCTTCCCTTCCTTCGCTCTTTTCCTCCATCACCG
TCTTCCCTTCCTTCCTTCCTTCGCTCTTTTCCTCCTCATTCCTTTCGTCT
TAACCCTTTCCCCGCTGCTTTTGCCCCTCCCTCCCTTTCTGCCTCCCCCC
CTCCTCGTCGTTCTCCCCCTCCCTAGATGGAGACCTGTGACAGCTGGGGA
AGTCCCTCCACAGATGCCACCAGAGCCTGTGTCGCCGCTTTAGGCCATTA
GAAAAAATATGAGACTGGAAGGAGAGCAGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGAGATGGAGAGAGGGAGGGAGGAAGGGAG
GCTGGTGCATTAGTCTTCGTGAGCGCGAGAATTTAAAGGAAGACAC back to topCoding sequence (CDS) from alignment at scaffold_42:175941..177886- >mRNA_10052 ID=mRNA_10052|Name=jgi.p|Nanoce1779_2|608752|organism=Nannochloropsis oceanica|type=CDS|length=3636bp|location=Sequence derived from alignment at scaffold_42:175941..177886- (Nannochloropsis oceanica)
GATGCTCGGGGCGAAAATCCCGCCTGCTACTTCAATTGCCAGGTAAAGCC
ATCACCGTCTTCCCTTCCTTCGCTCTTTTCCTCCATCACCGTCTTCCCTT
CCTTCCTTCCTTCGCTCTTTTCCTCCTCATTCCTTTCGTCTTAATTCTGC
AAGACGGATAGCGGGAACAACGACCACATGTGCAAATTCGACGGCTCCAA
TCACTTGCGGGTATCTGCCCGATGCTGCCTATCGAGGAGACAATAGCAAG
GTCCACGGGTGCGACGAATCGACCATTCAGATGCCCTGCCTGCCCCGGCT
CCGGTCGAGAAGGATATAGGTCCCGACGGCACCAAGCTCAAGATGTTGAT
CAATTGCTTTGCCTGCTACGACATCCACCGCGTCTGAGGCCCGCCCTCAT
AAATCAGACGACCCCAAGCTGCGAGGAACTGAGCCTGAGGATGCGCATTT
TTCTTCCCCTCGCCCTCTTTGCCGCCATGGCCCTGACTTTTACCGCCGCC
GTGGAAGACCCCCAGCAAGACACTTCCGCCGCTCCTGCTGCCCCGGCTAC
TTCTGACACGCCCGTGGACCCTGCTGCTGTCCCTGAGGTCCCTGCAACGC
CTGCAGGATGCTCGGGGCGAAAATCCCGCCTGCTACTTCAATTGCCAGGT
AAAGCCATCACCGTCTTCCCTTCCTTCGCTCTTTTCCTCCATCACCGTCT
TCCCTTCCTTCCTTCCTTCGCTCTTTTCCTCCTCATTCCTTTCGTCTTAA
TTCTGCAAGACGGATAGCGGGAACAACGACCACATGTGCAAATTCGACGG
CTCCAATCACTTGCGGGTATCTGCCCGATGCTGCCTATCGAGGAGACAAT
AGCAAGGTCCACGGGTGCGACGAATCGACCATTCAGATGCCCTGCCTGCC
CCGGCTCCGGTCGAGAAGGATATAGGTCCCGACGGCACCAAGCTCAAGAT
GTTGATCAATTGCTTTGCCTGCTACGACATCCACCGCGTCTGAGGCCCGC
CCTCATAAATCAGACGACCCCAAGCTGCGAGGAACTGAGCCTGAGGATGC
GCATTTTTCTTCCCCTCGCCCTCTTTGCCGCCATGGCCCTGACTTTTACC
GCCGCCGTGGAAGACCCCCAGCAAGACACTTCCGCCGCTCCTGCTGCCCC
GGCTACTTCTGACACGCCCGTGGACCCTGCTGCTGTCCCTGAGGTCCCTG
CAACGCCTGCAGGATGCTCGGGGCGAAAATCCCGCCTGCTACTTCAATTG
CCAGGTAAAGCCATCACCGTCTTCCCTTCCTTCGCTCTTTTCCTCCATCA
CCGTCTTCCCTTCCTTCCTTCCTTCGCTCTTTTCCTCCTCATTCCTTTCG
TCTTAATTCTGCAAGACGGATAGCGGGAACAACGACCACATGTGCAAATT
CGACGGCTCCAATCACTTGCGGGTATCTGCCCGATGCTGCCTATCGAGGA
GACAATAGCAAGGTCCACGGGTGCGACGAATCGACCATTCAGATGCCCTG
CCTGCCCCGGCTCCGGTCGAGAAGGATATAGGTCCCGACGGCACCAAGCT
CAAGATGTTGATCAATTGCTTTGCCTGCTACGACATCCACCGCGTCTGAG
GCCCGCCCTCATAAATCAGACGACCCCAAGCTGCGAGGAACTGAGCCTGA
GGATGCGCATTTTTCTTCCCCTCGCCCTCTTTGCCGCCATGGCCCTGACT
TTTACCGCCGCCGTGGAAGACCCCCAGCAAGACACTTCCGCCGCTCCTGC
TGCCCCGGCTACTTCTGACACGCCCGTGGACCCTGCTGCTGTCCCTGAGG
TCCCTGCAACGCCTGCAGGATGCTCGGGGCGAAAATCCCGCCTGCTACTT
CAATTGCCAGGTAAAGCCATCACCGTCTTCCCTTCCTTCGCTCTTTTCCT
CCATCACCGTCTTCCCTTCCTTCCTTCCTTCGCTCTTTTCCTCCTCATTC
CTTTCGTCTTAATTCTGCAAGACGGATAGCGGGAACAACGACCACATGTG
CAAATTCGACGGCTCCAATCACTTGCGGGTATCTGCCCGATGCTGCCTAT
CGAGGAGACAATAGCAAGGTCCACGGGTGCGACGAATCGACCATTCAGAT
GCCCTGCCTGCCCCGGCTCCGGTCGAGAAGGATATAGGTCCCGACGGCAC
CAAGCTCAAGATGTTGATCAATTGCTTTGCCTGCTACGACATCCACCGCG
TCTGAGGCCCGCCCTCATAAATCAGACGACCCCAAGCTGCGAGGAACTGA
GCCTGAGGATGCGCATTTTTCTTCCCCTCGCCCTCTTTGCCGCCATGGCC
CTGACTTTTACCGCCGCCGTGGAAGACCCCCAGCAAGACACTTCCGCCGC
TCCTGCTGCCCCGGCTACTTCTGACACGCCCGTGGACCCTGCTGCTGTCC
CTGAGGTCCCTGCAACGCCTGCAGGATGCTCGGGGCGAAAATCCCGCCTG
CTACTTCAATTGCCAGGTAAAGCCATCACCGTCTTCCCTTCCTTCGCTCT
TTTCCTCCATCACCGTCTTCCCTTCCTTCCTTCCTTCGCTCTTTTCCTCC
TCATTCCTTTCGTCTTAATTCTGCAAGACGGATAGCGGGAACAACGACCA
CATGTGCAAATTCGACGGCTCCAATCACTTGCGGGTATCTGCCCGATGCT
GCCTATCGAGGAGACAATAGCAAGGTCCACGGGTGCGACGAATCGACCAT
TCAGATGCCCTGCCTGCCCCGGCTCCGGTCGAGAAGGATATAGGTCCCGA
CGGCACCAAGCTCAAGATGTTGATCAATTGCTTTGCCTGCTACGACATCC
ACCGCGTCTGAGGCCCGCCCTCATAAATCAGACGACCCCAAGCTGCGAGG
AACTGAGCCTGAGGATGCGCATTTTTCTTCCCCTCGCCCTCTTTGCCGCC
ATGGCCCTGACTTTTACCGCCGCCGTGGAAGACCCCCAGCAAGACACTTC
CGCCGCTCCTGCTGCCCCGGCTACTTCTGACACGCCCGTGGACCCTGCTG
CTGTCCCTGAGGTCCCTGCAACGCCTGCAGGATGCTCGGGGCGAAAATCC
CGCCTGCTACTTCAATTGCCAGGTAAAGCCATCACCGTCTTCCCTTCCTT
CGCTCTTTTCCTCCATCACCGTCTTCCCTTCCTTCCTTCCTTCGCTCTTT
TCCTCCTCATTCCTTTCGTCTTAATTCTGCAAGACGGATAGCGGGAACAA
CGACCACATGTGCAAATTCGACGGCTCCAATCACTTGCGGGTATCTGCCC
GATGCTGCCTATCGAGGAGACAATAGCAAGGTCCACGGGTGCGACGAATC
GACCATTCAGATGCCCTGCCTGCCCCGGCTCCGGTCGAGAAGGATATAGG
TCCCGACGGCACCAAGCTCAAGATGTTGATCAATTGCTTTGCCTGCTACG
ACATCCACCGCGTCTGAGGCCCGCCCTCATAAATCAGACGACCCCAAGCT
GCGAGGAACTGAGCCTGAGGATGCGCATTTTTCTTCCCCTCGCCCTCTTT
GCCGCCATGGCCCTGACTTTTACCGCCGCCGTGGAAGACCCCCAGCAAGA
CACTTCCGCCGCTCCTGCTGCCCCGGCTACTTCTGACACGCCCGTGGACC
CTGCTGCTGTCCCTGAGGTCCCTGCAACGCCTGCAG back to top
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