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Properties
Property Name | Value |
TranscriptId | 608734 |
Track | FilteredModels2 |
ProteinId | 608648 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_42 | supercontig | scaffold_42:113858..116493 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10035 ID=mRNA_10035|Name=jgi.p|Nanoce1779_2|608648|organism=Nannochloropsis oceanica|type=mRNA|length=1301bp ACAGGTAGTTCTACCATACCTCTCGCATGGCTCCTTCATTGTTACGCACC CCGCCTCCTCCGACGCCTCGTCGCGACGGCTTTCACCGGGTGCGTTTTAG CCTCCTCACTCCGCGCATTCTGCCTACAGTCTCACCCTCCATGTCTTGCT GCCCCTGTCCCGCCGTCTCTCCTCGCCCTTTCCTCTTGTGCCCTAATTTG TAATTTCTCACATTCATTTCGCTTTCTATCTTCCCATTTTCTGCTTTCAC GCAATGAAAAAGACCTCTTCCGGCCCAGCGGCATGGCAAGATCGAAGCCA AGCCCTTGGGCTGACCGACGTCATTTATCGCGTCGCACCGCAAGAGGGTA TCGCCAAGCTCAGCATTAACCGCCCGTCAGTTAGAAATGCGTTTCGTCCC ACTACCATTCGGGAGCTCAAGCGCTGCGTGGCTTTGGCCCAGGATGACTT GCAAGTGGGCGTTATCATACTGACTGGGGAAGGCGACGAGGCCTTCTGTT CCGGCGGCGATCAAAGTGTGCGGGGAGAGGGGGGGTACGACGATGGGAGC GAGGAGGCACCGAGGCTTACGGTGTTGGATTTGCAGGTGCAAATGCGGCG GTGTCCTAAGCCTGTGGTTGCCATGGTGGCTGGGTATGCCATTGGGGGCG GGCACATTTTGCACATGTTGTGCGATTTGACGATAAGCGCCGACAACGCC GTCTTTGGACAGACAGGGCCTCGGGTTGGCAGTTTCGATGCAGGCTACGG CAGCAGCCATATGGCCCGCCTGGTGGGACAGAAAAAAGCCCGCGAAATTT GGTTTCTGTGTCGGTTTTATTCAGCGCAAGAGGCGCTTGAGATGGGGCTG GTAAATACCGTCGTGCCCTTGGCGTCCCTGGAGGGCGAGACGCTCAAGTG GTGCCGGCGGATAATGGAGAATTCCCCCACGGCCATCGCATGCTGCAAGG CTGCACTCAACGCGGATGAGGACGGAGCGGCGGGCATCATGGAGCTGGCG GGCAATGCCACGCGGTTATTTTATTTGAGCGAGGAAGGAAAAGAGGGTCG CAACGCGTTTTTGCAGAAACGGAAGCCCGCCTTTCGATCCTTGCCCACCT CGAAGCTGTGAAGAGGCGTGAGAAGGTGGTGGAATGAGGGATAGGAGGGG CGAGGCATGTGTGATGTGAAGGGGAGGAGGGACGAGATATAGGGAGGGGG AGGCATGGGTACAGGAGAAGACTGTGAAGGAGGAAGGGAGGGAGAAGGGA GGGAGGGAGTGGGGGGGAAGCCAGTGAAATTTTCTCTGCCTTTGGACAGA A back to topprotein sequence of jgi.p|Nanoce1779_2|608648 >mRNA_10035-protein ID=mRNA_10035-protein|Name=jgi.p|Nanoce1779_2|608648|organism=Nannochloropsis oceanica|type=polypeptide|length=286bp MKKTSSGPAAWQDRSQALGLTDVIYRVAPQEGIAKLSINRPSVRNAFRPT TIRELKRCVALAQDDLQVGVIILTGEGDEAFCSGGDQSVRGEGGYDDGSE EAPRLTVLDLQVQMRRCPKPVVAMVAGYAIGGGHILHMLCDLTISADNAV FGQTGPRVGSFDAGYGSSHMARLVGQKKAREIWFLCRFYSAQEALEMGLV NTVVPLASLEGETLKWCRRIMENSPTAIACCKAALNADEDGAAGIMELAG NATRLFYLSEEGKEGRNAFLQKRKPAFRSLPTSKL* back to topmRNA from alignment at scaffold_42:113858..116493- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10035 ID=mRNA_10035|Name=jgi.p|Nanoce1779_2|608648|organism=Nannochloropsis oceanica|type=mRNA|length=2636bp|location=Sequence derived from alignment at scaffold_42:113858..116493- (Nannochloropsis oceanica) ACAGGTAGTTCTACCATACCTCTCGCATGGCTCCTTCATTGTTACGCACC
CCGCCTCCTCCGACGCCTCGTCGCGACGGCTTTCACCGGGTGCGTTTTAG
CCTCCTCACTCCGCGCATTCTGCCTACAGTCTCACCCTCCATGTCTTGCT
GCCCCTGTCCCGCCGTCTCTCCTCGCCCTTTCCTCTTGTGCCCTAATTTG
TAATTTCTCACATTCATTTCGCTTTCTATCTTCCCATTTTCTGCTTTCAC
GCAATGAAAAAGACCTCTTCCGGCCCAGCGGCATGGCAAGATCGAAGCCA
AGCCCTTGGGCTGACCGACGTCATTTATCGCGTCGCACCGCAAGAGGGTA
ATAACGCGAAAGAGAAAGGGAAAAGGGTGAAGAAGGAGCGGAGAGATAGC
AACTAAGAAGGGGAAATGGGAACCACGAGCTCCAGCTTCCTCAACCTGTC
ATCCATCGCATTCATTCTTCCCTCCCTCCCTCCCTCCCTCCCTCGCTCCC
TTCCTCCCCTCTCTTTCCTGGTTTCAGGTATCGCCAAGCTCAGCATTAAC
CGCCCGTCAGTTAGAAATGCGTTTCGTCCCACTACCATTCGGGAGCTCAA
GCGCTGCGTGGCTTTGGCCCAGGATGACTTGCAAGTGGGCGTTATCATAC
TGACTGGTAGGCAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGG
TGGCTGCAAAGATCCATCTCTGAAATTTAAGATGGCTGTCTATTTATTCT
TAGTCGTAATTGTAATCATTATTTGGGTCTTAGCATCGATTTTAACCTCT
ACCTTAGTCTCAACTTTACATCTTGCCCTTCCTACTACTATTTTCCTTCT
CGCACAGGGGAAGGCGACGAGGCCTTCTGTTCCGGCGGCGATCAAAGTGT
GCGGGGAGAGGGGGGGTACGACGATGGGAGCGAGGAGGCACCGAGGCTTA
CGGTGTTGGATTTGCAGGTAGAGAGGGAGGGAGGAAGAGAGGAAGGGAGG
GAGAGAAGGAGGGAAAAGGAATGGCACCAGGCTATGTCCGGGCATCTTAT
CAAGACTCCGCCCTCTATCCTTTTCTCTCTCCCTCCTTCCCTCCCTCCCT
CAGGTGCAAATGCGGCGGTGTCCTAAGCCTGTGGTTGCCATGGTGGCTGG
GTATGCCATTGGGGGCGGGCACATTTTGCACATGTTGTGCGATTTGACGA
TAAGCGCCGACAACGCCGTCTTTGGACAGACAGGGCCTCGGGTTGGCAGG
TGGGGTGGACGAGTGGATGGTTGAATGGGTGGGGGTGTGTGGGTAGGTGG
GCAGGTGGATGGGAGGTATGCGCGGTAGATGGCGATGTTTTCTTCCTTTT
CCTCCCTCCCTCGTTCCCTCCTTCCCTCCTTTCCTCCTTCCCTGCCTGCT
CATCTCCTTCTCTGCCCTCACACCTCCCCCATGCCATGCCTCTAAAATTC
TCACGTGTCATTTTCCCCCTTCCTCTTTCCTTTCTTGTCCATTCCTCTTT
TCCTCCCTCCCCCCTCCTCAAGTTTCGATGCAGGCTACGGCAGCAGCCAT
ATGGCCCGCCTGGTGGGACAGAAAAAAGCCCGCGAAATTTGGTTTCTGTG
TCGGTTTTATTCAGCGCAAGAGGCGCTTGAGATGGGGGTAAGGAGGCAGA
GAGAGAGAAAGGGAAGAAGGGAGGGGAAGCGTCTTTCTTGTTCCATTTGT
GAGTGGTGACCACCATCGCCCCCCTGACTTTACCCTCCCTCCCTCCCTCC
CTGCCTGCCTCCCCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGCTGGTAA
ATACCGTCGTGCCCTTGGCGTCCCTGGAGGGCGAGACGCTCAAGTGGTGC
CGGCGGATAATGGAGAATTCCCCCACGGCCATCGCATGCTGCAAGGCTGC
ACTCAACGCGGATGAGGACGGAGCGGCGGGGTAAGGAGGGAAGGAAGGAA
GAAGGGAAGGAAGGAAAGGAGGATAAGCGACTCTCTCACTCTATTTAAGT
CTTGTTACTCACACCCCCGTACTCACACACCCACTCACCTCCCTTTAACC
CCACACCTATAACCCTCGGGGATAAGCGATTTTCTCACTCCATTTAAGTC
TCCCCCTCTCACCCTCCCCCTCTTCCATCTATCTGCCGGTGGTGACAAGG
CGGGCCGCCGTCCTCCTCTTCCTTTCATCCCTCCGCGATAGTCGAACCTC
CCTCCTCAAACCCACACCTAACCCTCAGTCCCCCCCCACACCCTCCCACT
CATTTTCCCCCTCACACAGCATCATGGAGCTGGCGGGCAATGCCACGCGG
TTATTTTATTTGAGCGAGGAAGGAAAAGAGGGTCGCAACGCGTTTTTGCA
GAAACGGAAGCCCGCCTTTCGATCCTTGCCCACCTCGAAGCTGTGAAGAG
GCGTGAGAAGGTGGTGGAATGAGGGATAGGAGGGGCGAGGCATGTGTGAT
GTGAAGGGGAGGAGGGACGAGATATAGGGAGGGGGAGGCATGGGTACAGG
AGAAGACTGTGAAGGAGGAAGGGAGGGAGAAGGGAGGGAGGGAGTGGGGG
GGAAGCCAGTGAAATTTTCTCTGCCTTTGGACAGAA back to topCoding sequence (CDS) from alignment at scaffold_42:113858..116493- >mRNA_10035 ID=mRNA_10035|Name=jgi.p|Nanoce1779_2|608648|organism=Nannochloropsis oceanica|type=CDS|length=6006bp|location=Sequence derived from alignment at scaffold_42:113858..116493- (Nannochloropsis oceanica) CATCATGGAGCTGGCGGGCAATGCCACGCGGTTATTTTATTTGAGCGAGG AAGGAAAAGAGGGTCGCAACGCGTTTTTGCAGAAACGGAAGCCCGCCTTT CGATCCTTGCCCACCTCGAAGCTGTGACTGGTAAATACCGTCGTGCCCTT GGCGTCCCTGGAGGGCGAGACGCTCAAGTGGTGCCGGCGGATAATGGAGA ATTCCCCCACGGCCATCGCATGCTGCAAGGCTGCACTCAACGCGGATGAG GACGGAGCGGCGGGTTTCGATGCAGGCTACGGCAGCAGCCATATGGCCCG CCTGGTGGGACAGAAAAAAGCCCGCGAAATTTGGTTTCTGTGTCGGTTTT ATTCAGCGCAAGAGGCGCTTGAGATGGGGGTGCAAATGCGGCGGTGTCCT AAGCCTGTGGTTGCCATGGTGGCTGGGTATGCCATTGGGGGCGGGCACAT TTTGCACATGTTGTGCGATTTGACGATAAGCGCCGACAACGCCGTCTTTG GACAGACAGGGCCTCGGGTTGGCAGGGGAAGGCGACGAGGCCTTCTGTTC CGGCGGCGATCAAAGTGTGCGGGGAGAGGGGGGGTACGACGATGGGAGCG AGGAGGCACCGAGGCTTACGGTGTTGGATTTGCAGGTATCGCCAAGCTCA GCATTAACCGCCCGTCAGTTAGAAATGCGTTTCGTCCCACTACCATTCGG GAGCTCAAGCGCTGCGTGGCTTTGGCCCAGGATGACTTGCAAGTGGGCGT TATCATACTGACTGATGAAAAAGACCTCTTCCGGCCCAGCGGCATGGCAA GATCGAAGCCAAGCCCTTGGGCTGACCGACGTCATTTATCGCGTCGCACC GCAAGAGGCATCATGGAGCTGGCGGGCAATGCCACGCGGTTATTTTATTT GAGCGAGGAAGGAAAAGAGGGTCGCAACGCGTTTTTGCAGAAACGGAAGC CCGCCTTTCGATCCTTGCCCACCTCGAAGCTGTGACTGGTAAATACCGTC GTGCCCTTGGCGTCCCTGGAGGGCGAGACGCTCAAGTGGTGCCGGCGGAT AATGGAGAATTCCCCCACGGCCATCGCATGCTGCAAGGCTGCACTCAACG CGGATGAGGACGGAGCGGCGGGTTTCGATGCAGGCTACGGCAGCAGCCAT ATGGCCCGCCTGGTGGGACAGAAAAAAGCCCGCGAAATTTGGTTTCTGTG TCGGTTTTATTCAGCGCAAGAGGCGCTTGAGATGGGGGTGCAAATGCGGC GGTGTCCTAAGCCTGTGGTTGCCATGGTGGCTGGGTATGCCATTGGGGGC GGGCACATTTTGCACATGTTGTGCGATTTGACGATAAGCGCCGACAACGC CGTCTTTGGACAGACAGGGCCTCGGGTTGGCAGGGGAAGGCGACGAGGCC TTCTGTTCCGGCGGCGATCAAAGTGTGCGGGGAGAGGGGGGGTACGACGA TGGGAGCGAGGAGGCACCGAGGCTTACGGTGTTGGATTTGCAGGTATCGC CAAGCTCAGCATTAACCGCCCGTCAGTTAGAAATGCGTTTCGTCCCACTA CCATTCGGGAGCTCAAGCGCTGCGTGGCTTTGGCCCAGGATGACTTGCAA GTGGGCGTTATCATACTGACTGATGAAAAAGACCTCTTCCGGCCCAGCGG CATGGCAAGATCGAAGCCAAGCCCTTGGGCTGACCGACGTCATTTATCGC GTCGCACCGCAAGAGGCATCATGGAGCTGGCGGGCAATGCCACGCGGTTA TTTTATTTGAGCGAGGAAGGAAAAGAGGGTCGCAACGCGTTTTTGCAGAA ACGGAAGCCCGCCTTTCGATCCTTGCCCACCTCGAAGCTGTGACTGGTAA ATACCGTCGTGCCCTTGGCGTCCCTGGAGGGCGAGACGCTCAAGTGGTGC CGGCGGATAATGGAGAATTCCCCCACGGCCATCGCATGCTGCAAGGCTGC ACTCAACGCGGATGAGGACGGAGCGGCGGGTTTCGATGCAGGCTACGGCA GCAGCCATATGGCCCGCCTGGTGGGACAGAAAAAAGCCCGCGAAATTTGG TTTCTGTGTCGGTTTTATTCAGCGCAAGAGGCGCTTGAGATGGGGGTGCA AATGCGGCGGTGTCCTAAGCCTGTGGTTGCCATGGTGGCTGGGTATGCCA TTGGGGGCGGGCACATTTTGCACATGTTGTGCGATTTGACGATAAGCGCC GACAACGCCGTCTTTGGACAGACAGGGCCTCGGGTTGGCAGGGGAAGGCG ACGAGGCCTTCTGTTCCGGCGGCGATCAAAGTGTGCGGGGAGAGGGGGGG TACGACGATGGGAGCGAGGAGGCACCGAGGCTTACGGTGTTGGATTTGCA GGTATCGCCAAGCTCAGCATTAACCGCCCGTCAGTTAGAAATGCGTTTCG TCCCACTACCATTCGGGAGCTCAAGCGCTGCGTGGCTTTGGCCCAGGATG ACTTGCAAGTGGGCGTTATCATACTGACTGATGAAAAAGACCTCTTCCGG CCCAGCGGCATGGCAAGATCGAAGCCAAGCCCTTGGGCTGACCGACGTCA TTTATCGCGTCGCACCGCAAGAGGCATCATGGAGCTGGCGGGCAATGCCA CGCGGTTATTTTATTTGAGCGAGGAAGGAAAAGAGGGTCGCAACGCGTTT TTGCAGAAACGGAAGCCCGCCTTTCGATCCTTGCCCACCTCGAAGCTGTG ACTGGTAAATACCGTCGTGCCCTTGGCGTCCCTGGAGGGCGAGACGCTCA AGTGGTGCCGGCGGATAATGGAGAATTCCCCCACGGCCATCGCATGCTGC AAGGCTGCACTCAACGCGGATGAGGACGGAGCGGCGGGTTTCGATGCAGG CTACGGCAGCAGCCATATGGCCCGCCTGGTGGGACAGAAAAAAGCCCGCG AAATTTGGTTTCTGTGTCGGTTTTATTCAGCGCAAGAGGCGCTTGAGATG GGGGTGCAAATGCGGCGGTGTCCTAAGCCTGTGGTTGCCATGGTGGCTGG GTATGCCATTGGGGGCGGGCACATTTTGCACATGTTGTGCGATTTGACGA TAAGCGCCGACAACGCCGTCTTTGGACAGACAGGGCCTCGGGTTGGCAGG GGAAGGCGACGAGGCCTTCTGTTCCGGCGGCGATCAAAGTGTGCGGGGAG AGGGGGGGTACGACGATGGGAGCGAGGAGGCACCGAGGCTTACGGTGTTG GATTTGCAGGTATCGCCAAGCTCAGCATTAACCGCCCGTCAGTTAGAAAT GCGTTTCGTCCCACTACCATTCGGGAGCTCAAGCGCTGCGTGGCTTTGGC CCAGGATGACTTGCAAGTGGGCGTTATCATACTGACTGATGAAAAAGACC TCTTCCGGCCCAGCGGCATGGCAAGATCGAAGCCAAGCCCTTGGGCTGAC CGACGTCATTTATCGCGTCGCACCGCAAGAGGCATCATGGAGCTGGCGGG CAATGCCACGCGGTTATTTTATTTGAGCGAGGAAGGAAAAGAGGGTCGCA ACGCGTTTTTGCAGAAACGGAAGCCCGCCTTTCGATCCTTGCCCACCTCG AAGCTGTGACTGGTAAATACCGTCGTGCCCTTGGCGTCCCTGGAGGGCGA GACGCTCAAGTGGTGCCGGCGGATAATGGAGAATTCCCCCACGGCCATCG CATGCTGCAAGGCTGCACTCAACGCGGATGAGGACGGAGCGGCGGGTTTC GATGCAGGCTACGGCAGCAGCCATATGGCCCGCCTGGTGGGACAGAAAAA AGCCCGCGAAATTTGGTTTCTGTGTCGGTTTTATTCAGCGCAAGAGGCGC TTGAGATGGGGGTGCAAATGCGGCGGTGTCCTAAGCCTGTGGTTGCCATG GTGGCTGGGTATGCCATTGGGGGCGGGCACATTTTGCACATGTTGTGCGA TTTGACGATAAGCGCCGACAACGCCGTCTTTGGACAGACAGGGCCTCGGG TTGGCAGGGGAAGGCGACGAGGCCTTCTGTTCCGGCGGCGATCAAAGTGT GCGGGGAGAGGGGGGGTACGACGATGGGAGCGAGGAGGCACCGAGGCTTA CGGTGTTGGATTTGCAGGTATCGCCAAGCTCAGCATTAACCGCCCGTCAG TTAGAAATGCGTTTCGTCCCACTACCATTCGGGAGCTCAAGCGCTGCGTG GCTTTGGCCCAGGATGACTTGCAAGTGGGCGTTATCATACTGACTGATGA AAAAGACCTCTTCCGGCCCAGCGGCATGGCAAGATCGAAGCCAAGCCCTT GGGCTGACCGACGTCATTTATCGCGTCGCACCGCAAGAGGCATCATGGAG CTGGCGGGCAATGCCACGCGGTTATTTTATTTGAGCGAGGAAGGAAAAGA GGGTCGCAACGCGTTTTTGCAGAAACGGAAGCCCGCCTTTCGATCCTTGC CCACCTCGAAGCTGTGACTGGTAAATACCGTCGTGCCCTTGGCGTCCCTG GAGGGCGAGACGCTCAAGTGGTGCCGGCGGATAATGGAGAATTCCCCCAC GGCCATCGCATGCTGCAAGGCTGCACTCAACGCGGATGAGGACGGAGCGG CGGGTTTCGATGCAGGCTACGGCAGCAGCCATATGGCCCGCCTGGTGGGA CAGAAAAAAGCCCGCGAAATTTGGTTTCTGTGTCGGTTTTATTCAGCGCA AGAGGCGCTTGAGATGGGGGTGCAAATGCGGCGGTGTCCTAAGCCTGTGG TTGCCATGGTGGCTGGGTATGCCATTGGGGGCGGGCACATTTTGCACATG TTGTGCGATTTGACGATAAGCGCCGACAACGCCGTCTTTGGACAGACAGG GCCTCGGGTTGGCAGGGGAAGGCGACGAGGCCTTCTGTTCCGGCGGCGAT CAAAGTGTGCGGGGAGAGGGGGGGTACGACGATGGGAGCGAGGAGGCACC GAGGCTTACGGTGTTGGATTTGCAGGTATCGCCAAGCTCAGCATTAACCG CCCGTCAGTTAGAAATGCGTTTCGTCCCACTACCATTCGGGAGCTCAAGC GCTGCGTGGCTTTGGCCCAGGATGACTTGCAAGTGGGCGTTATCATACTG ACTGATGAAAAAGACCTCTTCCGGCCCAGCGGCATGGCAAGATCGAAGCC AAGCCCTTGGGCTGACCGACGTCATTTATCGCGTCGCACCGCAAGAGGCA TCATGGAGCTGGCGGGCAATGCCACGCGGTTATTTTATTTGAGCGAGGAA GGAAAAGAGGGTCGCAACGCGTTTTTGCAGAAACGGAAGCCCGCCTTTCG ATCCTTGCCCACCTCGAAGCTGTGACTGGTAAATACCGTCGTGCCCTTGG CGTCCCTGGAGGGCGAGACGCTCAAGTGGTGCCGGCGGATAATGGAGAAT TCCCCCACGGCCATCGCATGCTGCAAGGCTGCACTCAACGCGGATGAGGA CGGAGCGGCGGGTTTCGATGCAGGCTACGGCAGCAGCCATATGGCCCGCC TGGTGGGACAGAAAAAAGCCCGCGAAATTTGGTTTCTGTGTCGGTTTTAT TCAGCGCAAGAGGCGCTTGAGATGGGGGTGCAAATGCGGCGGTGTCCTAA GCCTGTGGTTGCCATGGTGGCTGGGTATGCCATTGGGGGCGGGCACATTT TGCACATGTTGTGCGATTTGACGATAAGCGCCGACAACGCCGTCTTTGGA CAGACAGGGCCTCGGGTTGGCAGGGGAAGGCGACGAGGCCTTCTGTTCCG GCGGCGATCAAAGTGTGCGGGGAGAGGGGGGGTACGACGATGGGAGCGAG GAGGCACCGAGGCTTACGGTGTTGGATTTGCAGGTATCGCCAAGCTCAGC ATTAACCGCCCGTCAGTTAGAAATGCGTTTCGTCCCACTACCATTCGGGA GCTCAAGCGCTGCGTGGCTTTGGCCCAGGATGACTTGCAAGTGGGCGTTA TCATACTGACTGATGAAAAAGACCTCTTCCGGCCCAGCGGCATGGCAAGA TCGAAGCCAAGCCCTTGGGCTGACCGACGTCATTTATCGCGTCGCACCGC AAGAGG back to top
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