|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 608671 |
| Track | FilteredModels2 |
| ProteinId | 608585 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_42 | supercontig | scaffold_42:69617..70756 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10021 ID=mRNA_10021|Name=jgi.p|Nanoce1779_2|608585|organism=Nannochloropsis oceanica|type=mRNA|length=972bp
GAGGGAGGGAGGGAGGAAGAAGAAGTGGAGGGGACGATGAAGTTGTATCT
AACTTACCGGCCGTTACTGAATGAAAGCGGACCCGTGATAGAGGAGGCAG
ATGTCCTCGTGGTGAATTTTGGTCTGCACTACCTGATCGACAAACGGCAC
GTCTTCCAGGAGGAGATGTGTGCGCTTCTCAAGAGGCTCCGAGATTTTGG
GAAGACGGAGGGGAAGCAGCTGGTTTGGCGTGAGACGTCTGCCCAGCACC
ACTTCAACGAAGGCGGCGAGTTTCCTCTCACCATCGACCCTGAGCGTTTC
GGCGTTCCTCGCAAGGACTACAAGGCAACGATGGATAGATGTTTCCCCAT
CCATTTTGGACCCTACATCCATCCTCAATGGCGGGACAAGCTGTTTCTGG
CCTTGGCAAGGGAGGAAGGGTGGGACGTACGGTTTTTGGGGGAGTATGAT
GAGGGGGAAGAGGGAGGGGAGGGAGTAACCGCCGAGAGGCGGCCGCGGCG
ACGACGAGGGGCGGACACTGCGTGTGGGGCTCGGGGAAAGAGCGAGGGGG
CAAAGGCAGCGGCAGTGGTAGGAGTGGATGGGGGAATGAGCATGCATGAG
GAGGAAGTGGAGAGGGACGGAAGGGGGGGAGAAGGGAAGAAGCCGGTGTT
GTATTGGATGCCTTTTTACCGCATCACGAGCGAGAGGTTGGACTTGCATC
CGTACAATGAATGGAAGGGGAAGTATGACTGTACTCATTATTGCTACACC
CCCTTTCTGTGGGACCCTTTGGTGGATGGATTGGGAAGGGCGGTGGAGGA
GGGGGCGGAGGAGGGGAGAGAGTGTCAGGAGGGAGAGGGAGTGGGAGGAT
AATAGGAGGGAGGGGGAAAGGGAAACTCTGCAGTGATGTATAAATGTAGG
TGTTTCTGTATAAAGCTATGCGAACGGGTAAAAATGAAAGAACGATTGTG
ATGCTTGTACGAATTAGGTGGA back to topprotein sequence of jgi.p|Nanoce1779_2|608585 >mRNA_10021-protein ID=mRNA_10021-protein|Name=jgi.p|Nanoce1779_2|608585|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp
MKLYLTYRPLLNESGPVIEEADVLVVNFGLHYLIDKRHVFQEEMCALLKR
LRDFGKTEGKQLVWRETSAQHHFNEGGEFPLTIDPERFGVPRKDYKATMD
RCFPIHFGPYIHPQWRDKLFLALAREEGWDVRFLGEYDEGEEGGEGVTAE
RRPRRRRGADTACGARGKSEGAKAAAVVGVDGGMSMHEEEVERDGRGGEG
KKPVLYWMPFYRITSERLDLHPYNEWKGKYDCTHYCYTPFLWDPLVDGLG
RAVEEGAEEGRECQEGEGVGG* back to topmRNA from alignment at scaffold_42:69617..70756- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10021 ID=mRNA_10021|Name=jgi.p|Nanoce1779_2|608585|organism=Nannochloropsis oceanica|type=mRNA|length=1140bp|location=Sequence derived from alignment at scaffold_42:69617..70756- (Nannochloropsis oceanica)
GAGGGAGGGAGGGAGGAAGAAGAAGTGGAGGGGACGATGAAGTTGTATCT
AACTTACCGGCCGTTACTGAATGAAAGCGGACCCGTGATAGAGGAGGCAG
ATGTCCTCGTGGTGAATTTTGGTCTGCACTACCTGATCGACAAACGGCAC
GTCTTCCAGGAGGAGATGTGTGCGCTTCTCAAGAGGCTCCGAGATTTTGG
GAAGACGGAGGGGAAGCAGCTGGTTTGGCGTGAGGTCGGTTTCTTTTTCC
TCCCTTTTTTCTCCCTTCCCCCCACCCCGCCGCTGCTTTAAAACCCGAAA
AGCCATGAAAGTACACCATGCCTCTCGTTAATTCCTTAAATCCCACACAT
AGAAACATACATATACATACATATATACACACACATACACACACGCATAC
AGACGTCTGCCCAGCACCACTTCAACGAAGGCGGCGAGTTTCCTCTCACC
ATCGACCCTGAGCGTTTCGGCGTTCCTCGCAAGGACTACAAGGCAACGAT
GGATAGATGTTTCCCCATCCATTTTGGACCCTACATCCATCCTCAATGGC
GGGACAAGCTGTTTCTGGCCTTGGCAAGGGAGGAAGGGTGGGACGTACGG
TTTTTGGGGGAGTATGATGAGGGGGAAGAGGGAGGGGAGGGAGTAACCGC
CGAGAGGCGGCCGCGGCGACGACGAGGGGCGGACACTGCGTGTGGGGCTC
GGGGAAAGAGCGAGGGGGCAAAGGCAGCGGCAGTGGTAGGAGTGGATGGG
GGAATGAGCATGCATGAGGAGGAAGTGGAGAGGGACGGAAGGGGGGGAGA
AGGGAAGAAGCCGGTGTTGTATTGGATGCCTTTTTACCGCATCACGAGCG
AGAGGTTGGACTTGCATCCGTACAATGAATGGAAGGGGAAGTATGACTGT
ACTCATTATTGCTACACCCCCTTTCTGTGGGACCCTTTGGTGGATGGATT
GGGAAGGGCGGTGGAGGAGGGGGCGGAGGAGGGGAGAGAGTGTCAGGAGG
GAGAGGGAGTGGGAGGATAATAGGAGGGAGGGGGAAAGGGAAACTCTGCA
GTGATGTATAAATGTAGGTGTTTCTGTATAAAGCTATGCGAACGGGTAAA
AATGAAAGAACGATTGTGATGCTTGTACGAATTAGGTGGA back to topCoding sequence (CDS) from alignment at scaffold_42:69617..70756- >mRNA_10021 ID=mRNA_10021|Name=jgi.p|Nanoce1779_2|608585|organism=Nannochloropsis oceanica|type=CDS|length=1632bp|location=Sequence derived from alignment at scaffold_42:69617..70756- (Nannochloropsis oceanica)
ACGTCTGCCCAGCACCACTTCAACGAAGGCGGCGAGTTTCCTCTCACCAT
CGACCCTGAGCGTTTCGGCGTTCCTCGCAAGGACTACAAGGCAACGATGG
ATAGATGTTTCCCCATCCATTTTGGACCCTACATCCATCCTCAATGGCGG
GACAAGCTGTTTCTGGCCTTGGCAAGGGAGGAAGGGTGGGACGTACGGTT
TTTGGGGGAGTATGATGAGGGGGAAGAGGGAGGGGAGGGAGTAACCGCCG
AGAGGCGGCCGCGGCGACGACGAGGGGCGGACACTGCGTGTGGGGCTCGG
GGAAAGAGCGAGGGGGCAAAGGCAGCGGCAGTGGTAGGAGTGGATGGGGG
AATGAGCATGCATGAGGAGGAAGTGGAGAGGGACGGAAGGGGGGGAGAAG
GGAAGAAGCCGGTGTTGTATTGGATGCCTTTTTACCGCATCACGAGCGAG
AGGTTGGACTTGCATCCGTACAATGAATGGAAGGGGAAGTATGACTGTAC
TCATTATTGCTACACCCCCTTTCTGTGGGACCCTTTGGTGGATGGATTGG
GAAGGGCGGTGGAGGAGGGGGCGGAGGAGGGGAGAGAGTGTCAGGAGGGA
GAGGGAGTGGGAGGATAAATGAAGTTGTATCTAACTTACCGGCCGTTACT
GAATGAAAGCGGACCCGTGATAGAGGAGGCAGATGTCCTCGTGGTGAATT
TTGGTCTGCACTACCTGATCGACAAACGGCACGTCTTCCAGGAGGAGATG
TGTGCGCTTCTCAAGAGGCTCCGAGATTTTGGGAAGACGGAGGGGAAGCA
GCTGGTTTGGCGTGAGACGTCTGCCCAGCACCACTTCAACGAAGGCGGCG
AGTTTCCTCTCACCATCGACCCTGAGCGTTTCGGCGTTCCTCGCAAGGAC
TACAAGGCAACGATGGATAGATGTTTCCCCATCCATTTTGGACCCTACAT
CCATCCTCAATGGCGGGACAAGCTGTTTCTGGCCTTGGCAAGGGAGGAAG
GGTGGGACGTACGGTTTTTGGGGGAGTATGATGAGGGGGAAGAGGGAGGG
GAGGGAGTAACCGCCGAGAGGCGGCCGCGGCGACGACGAGGGGCGGACAC
TGCGTGTGGGGCTCGGGGAAAGAGCGAGGGGGCAAAGGCAGCGGCAGTGG
TAGGAGTGGATGGGGGAATGAGCATGCATGAGGAGGAAGTGGAGAGGGAC
GGAAGGGGGGGAGAAGGGAAGAAGCCGGTGTTGTATTGGATGCCTTTTTA
CCGCATCACGAGCGAGAGGTTGGACTTGCATCCGTACAATGAATGGAAGG
GGAAGTATGACTGTACTCATTATTGCTACACCCCCTTTCTGTGGGACCCT
TTGGTGGATGGATTGGGAAGGGCGGTGGAGGAGGGGGCGGAGGAGGGGAG
AGAGTGTCAGGAGGGAGAGGGAGTGGGAGGATAAATGAAGTTGTATCTAA
CTTACCGGCCGTTACTGAATGAAAGCGGACCCGTGATAGAGGAGGCAGAT
GTCCTCGTGGTGAATTTTGGTCTGCACTACCTGATCGACAAACGGCACGT
CTTCCAGGAGGAGATGTGTGCGCTTCTCAAGAGGCTCCGAGATTTTGGGA
AGACGGAGGGGAAGCAGCTGGTTTGGCGTGAG back to top
|