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Properties
| Property Name | Value |
|---|
| TranscriptId | 608652 |
| Track | FilteredModels2 |
| ProteinId | 608566 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_42 | supercontig | scaffold_42:53963..55580 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10018 ID=mRNA_10018|Name=jgi.p|Nanoce1779_2|608566|organism=Nannochloropsis oceanica|type=mRNA|length=1479bp
ACAGGTTCCGCACCCAAGCACCTTGGGAAGGACCGCAAGCATGCAGCCGA
GTAGCAGCAGCAGCGGCAGCAGGTGCCTATTGGCGCTCTGCCTAACTCTT
TGCCTAATAGCCATGGAGGAGGCGGGGGAGGAGGTAGTGGCAGCAGCAGC
AGCAGCAACAGCGACTACAGGCTGCTGCTGTCGCATGGGTGCAATTTGAG
GGCGTGTTAGTTGCTTCTTGTGCGGTGTTCAAAAAATTGTCAGTCCAGCA
AATGCGGGTTTAGCTTGAGATAAAGATTGATTCTGCCCCATAAACATACA
CGAGCGGCCACATCATATGCACTCACCATCCCTTCCTCCCTCCATCCCTC
CCCTCCTTCCCCCCCGACAAACCAGGTCAGCGCCTTCCTGACCGCCCCCA
CCCTCCCCTCCAGACTTTCGTCCGCCTCCTCCACCACCTCCTCAATAAGA
ACATACAGCACGCGCCCCCCCTTCCCCCGCCCTCCCGGTGGTGGTGGAGG
ACCAGGCCGTCCCCCCTTCCGTCCTGGCGGCCCCCCTCGTCCCGGGGGAG
GAGGCGGTCAACGCAATCGTTGGGGTCCGCCGGAAGTGGATCCAGACAGG
CCACCGATGAATGATGCTCTCTTGAGGCTGGCGCCGAACAACGTCCGTGT
GGTGATATCGAACCCGGAGGAGGGGGACGAGATGGCGGGGGTGATGGCCA
CCAAGGAGGCATTGATGAAAGCCAAGGAGATGGGGCTAGACCTGATCATG
ATCTCCGAGACGGCCGACCCCCCCGTGGTGAAGATCATCGACTACGGCAA
GTTCAAGTACTCGCTGGAGAAGAAGAAGAAGGAGCAGAAGAAGAAGGCCA
AGACGACGGAGGTTAAGGAGGTGAAGATGTCGTACAAGATCGAGACGCAC
GACTATGGGGTGCGCATGAAGCAGATGACCCGATTCTTGGAGGAGGGGGA
CAAAGTTAAGGTGATGGTTCAATTCCGTGGTCGTGAGCAGCAGCACATTG
ACCTGGGCCACGAGCTGCTCGGGAAGATTAAGGTGGATTTTGTGGAGCTG
GCGGTGCAGGAGGGGGACGTACGGAGGGAGGGAGGGAGGTTGATTGCCAT
GTTCAAGCCGAAGAAGACGATTTAAAGGGAAGGAAAGAGGGAAGGAGGGA
GTGAGGGGGGGGCGAAAACAGAAATAAATATGAAGAGTGTGGAGACACAG
CACCAGCAGCACACAAGGCTGAGGATAGATGAGGCTGGAACAGGGAGGGA
GGAGAAAGAGGGAAGAAGAGTTCGAAGACGATCGAGAGGTGAGAGAGACA
GGTGAGGAGCCTGTATTCCTCCGCTCCCTCCCTTCTTCCCTCCCTTACTC
ACTCTCTATGGATAAACGCAGCCCAAGGCCCCTCTCGCTCTCCCTGGAAG
GGATGGGCGGACGTGGGGGAAGGGAAGAAGAAGGAGCTTACAAGAAGAAT
TAAGTACGTGCGAGGGAAAACGACGAGAA back to topprotein sequence of jgi.p|Nanoce1779_2|608566 >mRNA_10018-protein ID=mRNA_10018-protein|Name=jgi.p|Nanoce1779_2|608566|organism=Nannochloropsis oceanica|type=polypeptide|length=173bp
MNDALLRLAPNNVRVVISNPEEGDEMAGVMATKEALMKAKEMGLDLIMIS
ETADPPVVKIIDYGKFKYSLEKKKKEQKKKAKTTEVKEVKMSYKIETHDY
GVRMKQMTRFLEEGDKVKVMVQFRGREQQHIDLGHELLGKIKVDFVELAV
QEGDVRREGGRLIAMFKPKKTI* back to topmRNA from alignment at scaffold_42:53963..55580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10018 ID=mRNA_10018|Name=jgi.p|Nanoce1779_2|608566|organism=Nannochloropsis oceanica|type=mRNA|length=1618bp|location=Sequence derived from alignment at scaffold_42:53963..55580- (Nannochloropsis oceanica)
ACAGGTTCCGCACCCAAGCACCTTGGGAAGGACCGCAAGCATGCAGCCGA
GTAGCAGCAGCAGCGGCAGCAGGTGCCTATTGGCGCTCTGCCTAACTCTT
TGCCTAATAGCCATGGTACGTGCGTAGGCCGGTCATGTGTCTCATAGTCT
GTATGTATGTACAGGAGCCCAAGAGCGGTGGCATGTAGTCCCAGCAACAG
CAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACACCA
CTAGGAGGAGGCGGGGGAGGAGGTAGTGGCAGCAGCAGCAGCAGCAACAG
CGACTACAGGCTGCTGCTGTCGCATGGGTGCAATTTGAGGGCGTGTTAGT
TGCTTCTTGTGCGGTGTTCAAAAAATTGTCAGTCCAGCAAATGCGGGTTT
AGCTTGAGATAAAGATTGATTCTGCCCCATAAACATACACGAGCGGCCAC
ATCATATGCACTCACCATCCCTTCCTCCCTCCATCCCTCCCCTCCTTCCC
CCCCGACAAACCAGGTCAGCGCCTTCCTGACCGCCCCCACCCTCCCCTCC
AGACTTTCGTCCGCCTCCTCCACCACCTCCTCAATAAGAACATACAGCAC
GCGCCCCCCCTTCCCCCGCCCTCCCGGTGGTGGTGGAGGACCAGGCCGTC
CCCCCTTCCGTCCTGGCGGCCCCCCTCGTCCCGGGGGAGGAGGCGGTCAA
CGCAATCGTTGGGGTCCGCCGGAAGTGGATCCAGACAGGCCACCGATGAA
TGATGCTCTCTTGAGGCTGGCGCCGAACAACGTCCGTGTGGTGATATCGA
ACCCGGAGGAGGGGGACGAGATGGCGGGGGTGATGGCCACCAAGGAGGCA
TTGATGAAAGCCAAGGAGATGGGGCTAGACCTGATCATGATCTCCGAGAC
GGCCGACCCCCCCGTGGTGAAGATCATCGACTACGGCAAGTTCAAGTACT
CGCTGGAGAAGAAGAAGAAGGAGCAGAAGAAGAAGGCCAAGACGACGGAG
GTTAAGGAGGTGAAGATGTCGTACAAGATCGAGACGCACGACTATGGGGT
GCGCATGAAGCAGATGACCCGATTCTTGGAGGAGGGGGACAAAGTTAAGG
TGATGGTTCAATTCCGTGGTCGTGAGCAGCAGCACATTGACCTGGGCCAC
GAGCTGCTCGGGAAGATTAAGGTGGATTTTGTGGAGCTGGCGGTGCAGGA
GGGGGACGTACGGAGGGAGGGAGGGAGGTTGATTGCCATGTTCAAGCCGA
AGAAGACGATTTAAAGGGAAGGAAAGAGGGAAGGAGGGAGTGAGGGGGGG
GCGAAAACAGAAATAAATATGAAGAGTGTGGAGACACAGCACCAGCAGCA
CACAAGGCTGAGGATAGATGAGGCTGGAACAGGGAGGGAGGAGAAAGAGG
GAAGAAGAGTTCGAAGACGATCGAGAGGTGAGAGAGACAGGTGAGGAGCC
TGTATTCCTCCGCTCCCTCCCTTCTTCCCTCCCTTACTCACTCTCTATGG
ATAAACGCAGCCCAAGGCCCCTCTCGCTCTCCCTGGAAGGGATGGGCGGA
CGTGGGGGAAGGGAAGAAGAAGGAGCTTACAAGAAGAATTAAGTACGTGC
GAGGGAAAACGACGAGAA back to topCoding sequence (CDS) from alignment at scaffold_42:53963..55580- >mRNA_10018 ID=mRNA_10018|Name=jgi.p|Nanoce1779_2|608566|organism=Nannochloropsis oceanica|type=CDS|length=519bp|location=Sequence derived from alignment at scaffold_42:53963..55580- (Nannochloropsis oceanica)
ATGAATGATGCTCTCTTGAGGCTGGCGCCGAACAACGTCCGTGTGGTGAT
ATCGAACCCGGAGGAGGGGGACGAGATGGCGGGGGTGATGGCCACCAAGG
AGGCATTGATGAAAGCCAAGGAGATGGGGCTAGACCTGATCATGATCTCC
GAGACGGCCGACCCCCCCGTGGTGAAGATCATCGACTACGGCAAGTTCAA
GTACTCGCTGGAGAAGAAGAAGAAGGAGCAGAAGAAGAAGGCCAAGACGA
CGGAGGTTAAGGAGGTGAAGATGTCGTACAAGATCGAGACGCACGACTAT
GGGGTGCGCATGAAGCAGATGACCCGATTCTTGGAGGAGGGGGACAAAGT
TAAGGTGATGGTTCAATTCCGTGGTCGTGAGCAGCAGCACATTGACCTGG
GCCACGAGCTGCTCGGGAAGATTAAGGTGGATTTTGTGGAGCTGGCGGTG
CAGGAGGGGGACGTACGGAGGGAGGGAGGGAGGTTGATTGCCATGTTCAA
GCCGAAGAAGACGATTTAA back to top
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