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Properties
| Property Name | Value |
|---|
| TranscriptId | 533725 |
| Track | FilteredModels2 |
| ProteinId | 533639 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_42 | supercontig | scaffold_42:48418..49589 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10015 ID=mRNA_10015|Name=jgi.p|Nanoce1779_2|533639|organism=Nannochloropsis oceanica|type=mRNA|length=702bp
ATGATTCGGAAAGGATTGGACACGCTGGGCAAGGCGTTGCGGGAGACCGG
TCAAGCTTTGGACCGAGCAGGCCTCGAGGCTTTGGGTACGGAGAAGCACA
AGGAGCTTTGGTCACGACACCGCCAAGTCTCCAACCTTTTCGACCAACGC
CCGCGCGTCGCCAGCAATGCCTTCGTCGCCCCATCGGCCACGGTCGTGGG
TGAAGTCGAGCTCTGGGACAAGGTCTCCATCTGGTACGGCGCTGTCATCC
GCGGCGATCGCAACAGCGTCAAGATCGGGAATTGTACCAATGTGCAAGAC
CACGCGGTTATCACCACAGTCCCCACACTCGATACGGGCTTTCCCGCCAA
GGTTGACATCGGACACATGGTCACTATCGGCCACGGCGCGACCATCACCT
CAGCCACCATCCAAGACAAAGCACTCATCGGGATCGGGAGCGTCGTCTCC
GAAGGCGCGCTTGTCGAAACCGGCGCCCAGCTCGCGGCCGGTTCCGTGGT
CCCGCCCGGGCGCCGCATCCCTGCAGGAGAGCTCTGGGGCGGCAACCCCG
TCAAATTTATCCGTAAGCTGGAGGATGAGGAGGTAGTGGCAAATGTGACG
GCAGCAGAGGCCTACCATGCCTTGGCTCGCACCCATGAGAATGAGTTCCA
ACCCTTTGGGGCTGCTTACCTGGACGCGGAGAAGGCGAAGCTGTCTGAGT
AG back to topprotein sequence of jgi.p|Nanoce1779_2|533639 >mRNA_10015-protein ID=mRNA_10015-protein|Name=jgi.p|Nanoce1779_2|533639|organism=Nannochloropsis oceanica|type=polypeptide|length=234bp
MIRKGLDTLGKALRETGQALDRAGLEALGTEKHKELWSRHRQVSNLFDQR
PRVASNAFVAPSATVVGEVELWDKVSIWYGAVIRGDRNSVKIGNCTNVQD
HAVITTVPTLDTGFPAKVDIGHMVTIGHGATITSATIQDKALIGIGSVVS
EGALVETGAQLAAGSVVPPGRRIPAGELWGGNPVKFIRKLEDEEVVANVT
AAEAYHALARTHENEFQPFGAAYLDAEKAKLSE* back to topmRNA from alignment at scaffold_42:48418..49589- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10015 ID=mRNA_10015|Name=jgi.p|Nanoce1779_2|533639|organism=Nannochloropsis oceanica|type=mRNA|length=1172bp|location=Sequence derived from alignment at scaffold_42:48418..49589- (Nannochloropsis oceanica)
ATGATTCGGAAAGGATTGGACACGCTGGGCAAGGCGTTGCGGGAGACCGG
TCAAGCTTTGGACCGAGCAGGCCTCGAGGCTTTGGGTACGGAGAAGCACA
AGGAGCTTTGTAAGTACTCTTGCGCGTTTGGATCAGTGCATGCTCTTGAC
CTCGATGTGAATTTATAGGCTTGTAGATGTGCTTGGATTCTACAGGCCCC
TGCTAGTGCTCCTGTGCCGTCTCGTGACGTGTATGACAGGAAGGCTTCCG
CATCCCCTCCTCTCTCTTCCCCTCTCCCGTTCTCATCCCCTCTTTCTCGG
TCTGTTCACCCATCATCCATGTCTGTGCAACAGGGTCACGACACCGCCAA
GTCTCCAACCTTTTCGACCAACGCCCGCGCGTCGCCAGCAATGCCTTCGT
CGCCCCATCGGCCACGGTCGTGGGTGAAGTCGAGCTCTGGGACAAGGTCT
CCATCTGGTACGGCGCTGTCATCCGCGGCGATCGCAACAGCGTCAAGATC
GGGAATTGTACCAATGTGCAAGACCACGCGGTTATCACCACAGTCCCCAC
ACTCGATACGGGCTTTCCCGCCAAGGTTGACATCGGACACATGGTCACTA
TCGGTAAGTCTTTTTTGAGGAGGTGTGATGCTTCTCCCTCCCTCTCAGTG
CAACATGTGTCGACTCTACCTTTCTAGTTCTCATTCTCCGGCCCTTATCG
TCTGCTCAGTGTTGACGAAATCTCCCTCCCCTGTCTTCTCTCTCCCTTGG
CGCTTGGGCGTGACTATCACCTCCGCCACCATCCACGAAAAGGCTCTCAT
CAGCACCCTCACCACCCTCCCTCCCTTCCTCCCTCTCCTAACCCCGCAGG
CCACGGCGCGACCATCACCTCAGCCACCATCCAAGACAAAGCACTCATCG
GGATCGGGAGCGTCGTCTCCGAAGGCGCGCTTGTCGAAACCGGCGCCCAG
CTCGCGGCCGGTTCCGTGGTCCCGCCCGGGCGCCGCATCCCTGCAGGAGA
GCTCTGGGGCGGCAACCCCGTCAAATTTATCCGTAAGCTGGAGGATGAGG
AGGTAGTGGCAAATGTGACGGCAGCAGAGGCCTACCATGCCTTGGCTCGC
ACCCATGAGAATGAGTTCCAACCCTTTGGGGCTGCTTACCTGGACGCGGA
GAAGGCGAAGCTGTCTGAGTAG back to topCoding sequence (CDS) from alignment at scaffold_42:48418..49589- >mRNA_10015 ID=mRNA_10015|Name=jgi.p|Nanoce1779_2|533639|organism=Nannochloropsis oceanica|type=CDS|length=2106bp|location=Sequence derived from alignment at scaffold_42:48418..49589- (Nannochloropsis oceanica)
GCCACGGCGCGACCATCACCTCAGCCACCATCCAAGACAAAGCACTCATC
GGGATCGGGAGCGTCGTCTCCGAAGGCGCGCTTGTCGAAACCGGCGCCCA
GCTCGCGGCCGGTTCCGTGGTCCCGCCCGGGCGCCGCATCCCTGCAGGAG
AGCTCTGGGGCGGCAACCCCGTCAAATTTATCCGTAAGCTGGAGGATGAG
GAGGTAGTGGCAAATGTGACGGCAGCAGAGGCCTACCATGCCTTGGCTCG
CACCCATGAGAATGAGTTCCAACCCTTTGGGGCTGCTTACCTGGACGCGG
AGAAGGCGAAGCTGTCTGAGTAGGGTCACGACACCGCCAAGTCTCCAACC
TTTTCGACCAACGCCCGCGCGTCGCCAGCAATGCCTTCGTCGCCCCATCG
GCCACGGTCGTGGGTGAAGTCGAGCTCTGGGACAAGGTCTCCATCTGGTA
CGGCGCTGTCATCCGCGGCGATCGCAACAGCGTCAAGATCGGGAATTGTA
CCAATGTGCAAGACCACGCGGTTATCACCACAGTCCCCACACTCGATACG
GGCTTTCCCGCCAAGGTTGACATCGGACACATGGTCACTATCGATGATTC
GGAAAGGATTGGACACGCTGGGCAAGGCGTTGCGGGAGACCGGTCAAGCT
TTGGACCGAGCAGGCCTCGAGGCTTTGGGTACGGAGAAGCACAAGGAGCT
TTGCCACGGCGCGACCATCACCTCAGCCACCATCCAAGACAAAGCACTCA
TCGGGATCGGGAGCGTCGTCTCCGAAGGCGCGCTTGTCGAAACCGGCGCC
CAGCTCGCGGCCGGTTCCGTGGTCCCGCCCGGGCGCCGCATCCCTGCAGG
AGAGCTCTGGGGCGGCAACCCCGTCAAATTTATCCGTAAGCTGGAGGATG
AGGAGGTAGTGGCAAATGTGACGGCAGCAGAGGCCTACCATGCCTTGGCT
CGCACCCATGAGAATGAGTTCCAACCCTTTGGGGCTGCTTACCTGGACGC
GGAGAAGGCGAAGCTGTCTGAGTAGGGTCACGACACCGCCAAGTCTCCAA
CCTTTTCGACCAACGCCCGCGCGTCGCCAGCAATGCCTTCGTCGCCCCAT
CGGCCACGGTCGTGGGTGAAGTCGAGCTCTGGGACAAGGTCTCCATCTGG
TACGGCGCTGTCATCCGCGGCGATCGCAACAGCGTCAAGATCGGGAATTG
TACCAATGTGCAAGACCACGCGGTTATCACCACAGTCCCCACACTCGATA
CGGGCTTTCCCGCCAAGGTTGACATCGGACACATGGTCACTATCGATGAT
TCGGAAAGGATTGGACACGCTGGGCAAGGCGTTGCGGGAGACCGGTCAAG
CTTTGGACCGAGCAGGCCTCGAGGCTTTGGGTACGGAGAAGCACAAGGAG
CTTTGCCACGGCGCGACCATCACCTCAGCCACCATCCAAGACAAAGCACT
CATCGGGATCGGGAGCGTCGTCTCCGAAGGCGCGCTTGTCGAAACCGGCG
CCCAGCTCGCGGCCGGTTCCGTGGTCCCGCCCGGGCGCCGCATCCCTGCA
GGAGAGCTCTGGGGCGGCAACCCCGTCAAATTTATCCGTAAGCTGGAGGA
TGAGGAGGTAGTGGCAAATGTGACGGCAGCAGAGGCCTACCATGCCTTGG
CTCGCACCCATGAGAATGAGTTCCAACCCTTTGGGGCTGCTTACCTGGAC
GCGGAGAAGGCGAAGCTGTCTGAGTAGGGTCACGACACCGCCAAGTCTCC
AACCTTTTCGACCAACGCCCGCGCGTCGCCAGCAATGCCTTCGTCGCCCC
ATCGGCCACGGTCGTGGGTGAAGTCGAGCTCTGGGACAAGGTCTCCATCT
GGTACGGCGCTGTCATCCGCGGCGATCGCAACAGCGTCAAGATCGGGAAT
TGTACCAATGTGCAAGACCACGCGGTTATCACCACAGTCCCCACACTCGA
TACGGGCTTTCCCGCCAAGGTTGACATCGGACACATGGTCACTATCGATG
ATTCGGAAAGGATTGGACACGCTGGGCAAGGCGTTGCGGGAGACCGGTCA
AGCTTTGGACCGAGCAGGCCTCGAGGCTTTGGGTACGGAGAAGCACAAGG
AGCTTT back to top
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