NO30G01250.1, NO30G01250.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO30G01250.1
Unique Name	NO30G01250.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3189
Alignment location	chr30:452477..457887 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr30	genome	chr30:452477..457887 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO30G01250.1 vs.
Match: CEL97677.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 261.5 bits (667), Expect = 7.000e-66
Identity = 223/632 (35.28%), Postives = 301/632 (47.63%), Query Frame = 0

Query:   25 WWGKTAVEVIEALKNGEVTPLELLDVAEARIRATDDVLNATPILCVDRAREHARRISTPSSLSPSFLPSSSSTSSSLKFPRGYLHGLPLLVKDV-TAVAGVPFTKGSSVIAAAAAVAPPPSPPFVRLLEEKGGVIMGKTNTPELGAGAQTFNSVFGTTNNPWDVRLTPGGSSGGTAAALAGGQAWLATGSDLGGSLRIPASFCGVVGLRPTPGRVA--GAA--HPW----LQQQQQERKERKEGGREKLMVVEKRKKKREEEEEEEGKDEEEEEEEEEGMLDPRHAFLAGVEGPMARNVGDLAYFFDSMVPRRTVEEKAWGGRERGREGGG-----REGGRGLRLAFSADMGLSDTALIEPEVLALCEKAAVWFAAGEGGRDGGREGGGRSGGNCGGGGGGGGGGGGVSEGIKIFHVLRARAFASMYGGHA--LYRDPIQRLAVKPEVIWNVEEGLRLSEEAVEEAKTQHQAYVGRW-LAFFQD-FDFLLTPTVMLPAFDARLRYPTRIASTFLPSYIDWLRLSSVVTLSCGPALSLPCGLTHDG--RPVGLQIIGPPYSEARLLALAALYEQAHP-FHALVPREPAHTADEEETIPTMTATTAAAAGAAGAAGAAVKPLPFYPGPRTTEEA 636
            WW   A EV+ AL+  +VTP  L++    R   TD ++NATP+ C DRA E A                    +  +      L GLP+++KD+  AV G+ + +GS +     A     +   V  +E +GG+++GKTN PE GA  QTFN+VFG T NP+D RLT  GSSGG+AAALA GQ WLA G+DLGGSLR PA++  V+GLRP+PG VA  GA    PW             +R   G    +                     ++E+ +EG        L    GPMAR   D+A F D M  R T   +  G    G   GG      +G + L         L D   ++ EV+ +C +A  W   G+G     RE                G   G+ E  ++F  LR+  F     G    + RD  + L VKPEV+WN  +GL  S E    A+ QH+ +V +    FF+D  DF+L P   +P FD R+RYP+RI S   P Y +W RL+S+++LSC P LSLP G T      P+GLQ++ PP+ E  LL  A+LYE+AHP     V  E     D  + I T  +  A                    GPRT EEA
Sbjct:    7 WWKLPAHEVVTALQKKQVTPAALVNECRKRWELTDGLINATPLPCFDRAMERA--------------------AVGVDSAEDVLSGLPVMIKDLGEAVEGLRWVEGSLIYEKRTADRTTAT---VAHIERRGGIVVGKTNIPEFGAECQTFNAVFGVTCNPFDTRLTASGSSGGSAAALAVGQVWLAHGNDLGGSLRSPAAYNNVIGLRPSPGLVATPGALPHPPWHDSTAPPPPPPAHQRLHSGGHWWVC--------------------KDEDGQEGWF---KLGLYAQNGPMARCAKDVALFLDGM--RGTEGWRELGFHHPGAAAGGFLRYLTDGPKQLPRKVLWMGSLGDLMEVDSEVMRVCWEAIDW-VKGQGVE--VRE----------------GQLAGIGEMPQVFRTLRSEIFEEKAQGETPIVLRDEYRDL-VKPEVLWNTRDGLETSPEDRRWARDQHRHFVSQLDQLFFRDGVDFILLPCAPIPPFDHRIRYPSRIGSMTFPFYTEWFRLTSIMSLSCCPTLSLPVGFTSTSPPLPIGLQVVAPPFREKSLLQFASLYEEAHPSISGRVSLEHPVVCDPGDVISTHGSCLA------------------IDGPRTAEEA 552

The following BLAST results are available for this feature:

BLAST of NO30G01250.1 vs.

BLAST of NO30G01250.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CEL97677.1	7.000e-66	35.28	unnamed protein product [Vitrella brassicaformis C...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO30G01250	NO30G01250	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO30G01250.1	NO30G01250.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO30G01250.1.cds1	NO30G01250.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds2	NO30G01250.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds3	NO30G01250.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds4	NO30G01250.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds5	NO30G01250.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds6	NO30G01250.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds7	NO30G01250.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds8	NO30G01250.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds9	NO30G01250.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds10	NO30G01250.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds11	NO30G01250.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds12	NO30G01250.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01250.1.cds13	NO30G01250.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr30:452477..457887-
coding sequence from alignment at chr30:452477..457887-

mRNA sequence

>NO30G01250.1 ID=NO30G01250.1|Name=NO30G01250.1|organism=Nannochloropsis oceanica|type=mRNA|length=3189bp
GCTGCTGCTGCTGCTGCTGCTGCTACTACTACCACGCTTAGTAATACGTG
CATGGTGTGTGGGCGCGTTCAGCGGCACATTACGAAGGGTCTAAGCACGG
CAGCAAGAGTCCAATTGCTCAAACAGGTCAAAATAAAGCGAGGGTGGTAC
GTGTCCTCGCCCATGTACAATTGGACCACGAGAGTTTTAAAAAAAAACTG
AAAAGACAAAGGTATGTCGTAATTCCATGCACAAGGATATAGACCTAAGA
TCGTGATTTGTGATTTCCCTCGTTTTTGATGGCAAGGAAGAGAGCTGGCC
ACCGTCGCAATTCCAACCCTCTTCCAGCCTGACTGATATACGCACGAGAT
GCAGGACCGTGTCACGATGTTTTGCAAAGCCAAAGAAAGGTTAACATAGT
CCAGAGCTGAACCTATTGTCGCAGGGGTGTGTGTTTAAACTTTCTACATG
CAGTGGGTACGCAGTTTGTGCCGCATGTCCGACGACGTTCTCTCGCACTA
TGTGACAGTGTGTTTGTCTGACATAATTGTCAGATAATCAAAGGCACTGT
CTGTCTCTCGATCTCTCGCACGGATAAACGCATACGCGACCCCAATCAAC
ACCAAGGCTTCCTATCGTTTCTTCGTTATATCATTTTGTCTTTTTCCTTT
CGTGCTGTGGCTACGGCTACCGCTGGCTCTACCGCTCGGAATCGGAGGAT
GCCCCTGCTGGATGTACTTATCCAGGTTCAACGGGGTCTGAAAGTTATGT
CGTCTTGCTTCTTTGAGCCTCTTCGCTTATGGGTCCTGTCCCAAGGCCCT
ATCTTAGACAGTACTCTTTCCTTTGTCAGCATTAGTCCTTGTGTGTTTGC
AGCCTTGGTGTGCTGTCAGAATGGCTTTTAATCAACCTCCTCTCTTCCAT
TACCCCTCCACTTGAACCACCTCACCCTCCGACGTCTCCTTCGGCCATCA
CACCGAAGTGTTTGAATGTTGCTCCCCCAAAATAAGCTGGGCATCGTCTC
ATTCCTCCACCTACTTTAGTCCGCCCCTTTACTTTTACTCGATGTAAATA
CTTCCACCCTCTTCTCAGAGCGCTCACCCTTCCCTTCTCCCTTCGCCCCC
CCCCCTCCTTCTTCCTCTTTCTTCCGGCAGAGACGCTACACAGAAAAGTC
GAGGCTGTATGGACGACACAATCGCAGGAACAGGCGAAGTTGAGTCTGCC
CGTATCCTGGCAGCCGCTGGAACCGGAACGTGGTGGGGCAAGACAGCCGT
CGAGGTTATCGAGGCCTTGAAAAACGGCGAAGTCACGCCCTTGGAGCTCT
TGGACGTGGCCGAGGCCCGCATACGCGCGACTGATGACGTCCTGAACGCC
ACGCCCATCCTCTGTGTGGACCGTGCGCGTGAACATGCCCGTCGAATCTC
CACCCCTTCCTCTCTCTCGCCCTCCTTCCTGCCCTCTTCCTCATCCACCT
CCTCCTCGTTGAAGTTCCCGAGAGGATACTTGCATGGCTTACCCTTGTTG
GTCAAGGACGTGACAGCTGTCGCTGGGGTGCCATTTACCAAGGGCAGCTC
TGTGATTGCTGCTGCTGCTGCCGTTGCCCCCCCTCCTTCCCCTCCATTCG
TGCGCCTGCTCGAGGAGAAGGGAGGGGTGATAATGGGGAAGACAAACACT
CCCGAGCTGGGAGCGGGAGCACAGACCTTTAACTCTGTGTTTGGCACGAC
AAACAACCCGTGGGATGTGAGGTTGACGCCGGGGGGCAGCAGCGGAGGCA
CTGCAGCAGCGCTCGCAGGAGGACAGGCTTGGCTCGCTACCGGCAGCGAC
CTAGGAGGGAGTCTGCGCATCCCTGCGTCTTTCTGCGGAGTCGTCGGCCT
GCGACCCACACCTGGACGAGTGGCTGGAGCAGCCCATCCGTGGCTGCAGC
AGCAGCAGCAGGAGAGGAAGGAGAGGAAGGAGGGAGGGAGGGAAAAACTG
ATGGTGGTGGAAAAGAGGAAGAAGAAGAGGGAGGAGGAGGAGGAGGAGGA
AGGAAAAGACGAAGAAGAAGAAGAAGAGGAGGAGGAGGGTATGCTTGATC
CGCGGCATGCGTTTTTGGCCGGTGTGGAGGGACCTATGGCTCGAAATGTG
GGAGATCTGGCTTATTTTTTCGACAGCATGGTGCCCCGTCGGACTGTAGA
GGAGAAGGCTTGGGGGGGAAGGGAAAGGGGGAGGGAAGGGGGGGGGAGGG
AGGGAGGGAGAGGTCTTCGCCTGGCGTTTTCGGCGGACATGGGCTTAAGC
GACACCGCTCTCATCGAGCCCGAGGTTCTAGCGCTGTGCGAGAAGGCCGC
CGTCTGGTTTGCTGCCGGGGAAGGAGGGAGGGACGGAGGGAGGGAAGGAG
GGGGAAGAAGCGGTGGAAACTGTGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGCGTCTCGGAAGGAATCAAGATATTCCACGTCCTGAGGGCTCG
GGCCTTCGCCTCTATGTATGGAGGACATGCCCTGTACCGGGACCCCATTC
AACGGCTGGCCGTTAAACCGGAGGTTATCTGGAACGTTGAGGAGGGCCTG
AGACTGAGTGAGGAGGCGGTGGAGGAGGCCAAGACGCAGCACCAAGCCTA
TGTAGGGCGATGGCTGGCGTTCTTCCAAGATTTTGACTTCTTGCTCACAC
CCACCGTGATGCTCCCTGCCTTCGACGCACGCCTGCGTTATCCTACCCGG
ATAGCTTCCACCTTCCTTCCTTCCTACATCGACTGGCTGCGTCTCTCATC
GGTCGTCACGCTCTCCTGTGGACCTGCACTCTCCCTGCCCTGCGGTCTCA
CGCACGACGGACGGCCGGTGGGACTGCAAATCATAGGCCCTCCCTACAGC
GAGGCCCGGCTGCTGGCTCTAGCGGCTCTCTATGAACAAGCACATCCCTT
CCACGCGCTTGTGCCACGCGAGCCCGCGCACACCGCCGACGAAGAGGAAA
CGATTCCAACCATGACGGCAACGACAGCAGCAGCAGCGGGAGCAGCGGGA
GCAGCGGGAGCAGCGGTGAAGCCTCTTCCTTTCTACCCCGGGCCGAGGAC
GACGGAAGAGGCGGCGGAGCTGTGTGGATTTAGGGTGCCACAGGAGGGAG
TGCAAAGGGAAGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGGGGTAGGGGAGTGGGAAGATCATTTCTGTGA

protein sequence of NO30G01250.1

>NO30G01250.1-protein ID=NO30G01250.1-protein|Name=NO30G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=677bp
MDDTIAGTGEVESARILAAAGTGTWWGKTAVEVIEALKNGEVTPLELLDV
AEARIRATDDVLNATPILCVDRAREHARRISTPSSLSPSFLPSSSSTSSS
LKFPRGYLHGLPLLVKDVTAVAGVPFTKGSSVIAAAAAVAPPPSPPFVRL
LEEKGGVIMGKTNTPELGAGAQTFNSVFGTTNNPWDVRLTPGGSSGGTAA
ALAGGQAWLATGSDLGGSLRIPASFCGVVGLRPTPGRVAGAAHPWLQQQQ
QERKERKEGGREKLMVVEKRKKKREEEEEEEGKDEEEEEEEEEGMLDPRH
AFLAGVEGPMARNVGDLAYFFDSMVPRRTVEEKAWGGRERGREGGGREGG
RGLRLAFSADMGLSDTALIEPEVLALCEKAAVWFAAGEGGRDGGREGGGR
SGGNCGGGGGGGGGGGGVSEGIKIFHVLRARAFASMYGGHALYRDPIQRL
AVKPEVIWNVEEGLRLSEEAVEEAKTQHQAYVGRWLAFFQDFDFLLTPTV
MLPAFDARLRYPTRIASTFLPSYIDWLRLSSVVTLSCGPALSLPCGLTHD
GRPVGLQIIGPPYSEARLLALAALYEQAHPFHALVPREPAHTADEEETIP
TMTATTAAAAGAAGAAGAAVKPLPFYPGPRTTEEAAELCGFRVPQEGVQR
EDGGGGGGGGGGGGGGGGRGVGRSFL*

mRNA from alignment at chr30:452477..457887-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO30G01250.1 ID=NO30G01250.1|Name=NO30G01250.1|organism=Nannochloropsis oceanica|type=mRNA|length=5411bp|location=Sequence derived from alignment at chr30:452477..457887- (Nannochloropsis oceanica)
GCTGCTGCTGCTGCTGCTGCTGCTACTACTACCACGCTTAGTAATACGTG
CATGGTGTGTGGGCGCGTTCAGCGGCACATTACGAAGGGTCTAAGCACGG
CAGCAAGAGTCCAATTGCTCAAACAGGTCAAAATAAAGCGAGGGTGGTAC
GTGTCCTCGCCCATGTACAATTGGACCACGAGAGTTTTAAAAAAAAACTG
AAAAGACAAAGGTATGTCGTAATTCCATGCACAAGGATATAGACCTAAGA
TCGTGATTTGTGATTTCCCTCGTTTTTGATGGCAAGGAAGAGAGCTGGCC
ACCGTCGCAATTCCAACCCTCTTCCAGCCTGACTGATATACGCACGAGAT
GCAGGACCGTGTCACGATGTTTTGCAAAGCCAAAGAAAGGTTAACATAGT
CCAGAGCTGAACCTATTGTCGCAGGGGTGTGTGTTTAAACTTTCTACATG
CAGTGGGTACGCAGTTTGTGCCGCATGTCCGACGACGTTCTCTCGCACTA
TGTGACAGTGTGTTTGTCTGACATAATTGTCAGATAATCAAAGGCACTGT
CTGTCTCTCGATCTCTCGCACGGATAAACGCATACGCGACCCCAATCAAC
ACCAAGGCTTCCTATCGTTTCTTCGTTATATCATTTTGTCTTTTTCCTTT
CGTGCTGTGGCTACGGCTACCGCTGGCTCTACCGCTCGGAATCGGAGGAT
GCCCCTGCTGGATGTACTTATCCAGGTTCAACGGGGTCTGAAAGTTATGT
CGTCTTGCTTCTTTGAGCCTCTTCGCTTATGGGTCCTGTCCCAAGGCCCT
ATCTTAGACAGTACTCTTTCCTTTGTCAGCATTAGTCCTTGTGTGTTTGC
AGCCTTGGTGTGCTGTCAGAATGGCTTTTAATCAACCTCCTCTCTTCCAT
TACCCCTCCACTTGAACCACCTCACCCTCCGACGTCTCCTTCGGCCATCA
CACCGAAGTGTTTGAATGTTGCTCCCCCAAAATAAGCTGGGCATCGTCTC
ATTCCTCCACCTACTTTAGTCCGCCCCTTTACTTTTACTCGATGTAAATA
CTTCCACCCTCTTCTCAGAGCGCTCACCCTTCCCTTCTCCCTTCGCCCCC
CCCCCTCCTTCTTCCTCTTTCTTCCGGCAGAGACGCTACACAGAAAAGTC
GAGGCTGTATGGACGACACAATCGCAGGAACAGGCGAAGTTGAGTCTGCC
CGTATCCTGGCAGCCGCTGGAACCGGAACGTGGTGGGGCAAGACAGCCGT
CGAGGTAAGAAGCGGGGAGGAAGGGGGGATAGTAAACGCGAAGCCGGCTC
TTTCCTTATCCTTCTCTCTTCTTCGCGATTAATTCCTTTTAATTTGCTCC
ATGCGCTGCTTTATTTCTCAATTGAAGTAGCTTCAGCTGCAAGCTACTTC
CCCACCCCCCCTCCCTTTCCCTCTCCCCTCCTCCCCCTCCCCCCCCTTGC
CAGGTTATCGAGGCCTTGAAAAACGGCGAAGTCACGCCCTTGGAGCTCTT
GGACGTGGCCGAGGCCCGCATACGGTGAGTCTCGTCATCCCTCCCTCCCT
GAGAACGGTTAAAGGAAAAAAGGATGGTGTCATTCACACCCTCTCGTCCT
CCCTCCCTCCCTCCCTCCCCCCTCCCTCGCTTAGCGCGACTGATGACGTC
CTGAACGCCACGCCCATCCTCTGTGTGGACCGTGCGCGTGAACATGCCCG
TCGAATCTCCACCCCTTCCTCTCTCTCGCCCTCCTTCCTGCCCTCTTCCT
CATCCACCTCCTCCTCGTTGAAGTTCCCGAGAGGATACTTGCATGGCTTA
CCCTTGTTGGTCAAGGTGAGCCTCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCTTCCTTCCTTCCCTTTTCTCCCATCAACATATCCTCATGGTCGCC
TCCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGACGTGACA
GCTGTCGCTGGGGTGCCATTTACCAAGGGCAGCTCTGTGATTGCTGCTGC
TGCTGCCGTTGCCCCCCCTCCTTCCCCTCCATTCGTGCGCCTGCTCGAGG
AGAAGGGAGGGGTGATAATGGGGAAGACAAACACTCCCGAGGTAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGCGAGGGAGGGAGGGAGCGA
GGGAGGGAGGAGCAGAATGTCGCCTGAACAAGGAGAAATACGCAATTGCA
CACAGCTATCCCTCCCTTCCTCCCGCCCCCAGCCCTCCCTTCCTCCCTTC
CTCCTCCCCTTCCTCCCTCCTTTCTCCTTCCTGTCCCTATATATCTGAGC
GCGGTTGCCCAGGCCTTCGATGCTGTCTTCGGTACGACAAACACCCACCC
TCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCTTTTCTCTCGCACTCATAC
ATACGTAGCTGGGAGCGGGAGCACAGACCTTTAACTCTGTGTTTGGCACG
ACAAACAACCCGTGGGATGTGAGGTTGACGCCGGGGGGCAGCAGCGGAGG
CACTGCAGCAGCGCTCGCAGGAGGACAGGCTTGGCTCGCTACCGGTATAG
ATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGTCTC
TTCCACTCTCCTTCCGCATTCCCTCTCCTTCCTTTTTCCCTTTCTGCAGC
AGCAGCAACAGCATCAAGATGTGAAGACGCCACCCTATAAATGCCCCTCC
TTCCCCCCTCCCTCCCTCCCTCCCTCCCTCAGGCAGCGACCTAGGAGGGA
GTCTGCGCATCCCTGCGTCTTTCTGCGGAGTCGTCGGCCTGCGACCCACA
CCTGGACGAGTGGCTGGAGCAGCCCATCCGTGGCTGCAGCAGCAGCAGCA
GGAGAGGAAGGAGAGGAAGGAGGGAGGGAGGGAAAAACTGATGGTGGTGG
AAAAGAGGAAGAAGAAGAGGGAGGAGGAGGAGGAGGAGGAAGGAAAAGAC
GAAGAAGAAGAAGAAGAGGAGGAGGAGGGTATGCTTGATCCGCGGCATGC
GTTTTTGGCCGGTGTGGAGGGACCTATGGCTCGAAATGTGGGAGATCTGG
CTTATTTTTTCGACAGCATGTGAGGAGAAAGGGAGGGAGGGAGGGAGGGA
GGGGGGGGGGCTGGAATGGGCTGCTATTCTTGCGAGGGAGGGAGGGAGGG
AGAAAGAATGGCAGGGGACGGATAGACAAGGACCTCCCTCCCTTCCTCCC
TCTCTTCCGTCCCTTCGCATTGTCCTGGGCTCATCCCTCCCTCCCTTCCT
TCCTCCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTC
CTCCCTTCCTTCCTTCCTTCCTTCCCCCCTCTCTCCCTCCCTCCCTCCCT
CCCTCGCTCAGGGTGCCCCGTCGGACTGTAGAGGAGAAGGCTTGGGGTCC
CTCCTTCCACGCGACTGTCCTCCGGGTAGTCAGGGACGGGTTTCGCGCCC
TCTCTCTCCAACCACCCACCCACATGAAGGGGGAAGGGAAAGGGGGAGGG
AAGGGGGGGGGAGGGAGGGAGGGAGAGGTCTTCGCCTGGCGTTTTCGGCG
GACATGGGCTTAAGCGGTGGGTGGAATGGTTTCGAACCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCCACGAGATGG
ACATTTTGTCGTATACTGACCCACGTCTATCCCCCTTTCCAAAAATTCAC
CGACTTTACGCCCGGCACACTCACTTTCTTCTATCCTCCCTCCGCCCTTT
CCTCCTTCCTTCCCTCCCTCCTTCCCTTCCTCAAGACACCGCTCTCATCG
AGCCCGAGGTTCTAGCGCTGTGCGAGAAGGCCGCCGTCTGGTTTGCTGCC
GGGGAAGGAGGGAGGGACGGAGGGAGGGAAGGAGGGGGAAGAAGCGGTGG
AAACTGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGTCTCGG
TCGGTTCTTCACCCTGTCAAGGAGGGAGGGATGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGGCGAGTGACCTTGACCATGGGAGCCTGTCC
TCTCAATCTACAGGAAGGAATCAAGATATTCCACGTCCTGAGGGCTCGGG
CCTTCGCCTCTATGTATGGAGGACATGCCCTGTACCGGGACCCCATTCAA
CGGCTGGCCGTTAAACCGGAGGTTATCTGGAACGTTGAGGAGGGCCTGAG
ACTGAGTGAGGAGGCGGTGGAGGAGGTAAGGGAGGAGAGGAGGGAGGGAG
AGAGGGCGGGAGGGAAGTGAAGGAAAGGAAAGGGAGGCGCGTGGATGAAA
GCGACTCGATGCGGAGATTTAAAACGTTTCTTCCTCCTTCCTTCCTTCCC
TCCCTCCCTTTCTCCCTTCTTCCCTCCCATCCTCCCTCCCTCCCTCCAGG
CCAAGACGCAGCACCAAGCCTATGTAGGGCGATGGCTGGCGTTCTTCCAA
GATTTTGACTTCTTGCTCACACCCACCGTGATGGTGAGGGAGGGAGGGAG
AAAAAGAGGGAGGGAGGGAAGGAGGAAAAGAGGGAGGAAGTGTGGAAAGG
GGGAGGGTGTAAAATGTATGGAGTGTTTTTAACCCTCCCTCCTAGATTGA
CACTTCTCCATTTCCTCCCTTTCTCCTTCATTCCCTCCCTCTCTTCCTCT
TTCCCTCCCTCCCAGCTCCCTGCCTTCGACGCACGCCTGCGTTATCCTAC
CCGGATAGCTTCCACCTTCCTTCCTTCCTACATCGACTGGCTGCGTCTCT
CATCGGTCGTCACGCTCTCCTGTGGACCTGCACTCTCCCTGCCCTGCGGT
CTCACGCACGACGGACGGCCGGTGGGACTGCAAATCATAGGTCAAGAAGG
GAGGGAGGAAGGGAGGGAGAGAGGGAGTGAAGGAGAAAAAAGGAAATCGG
GCGCTGTATACAAATAATCGTTTCCACCTTTCTCTCAACGTCTCTCAACG
GATGAACATTGAAAACTCATGCTGAGTAGACTTAGAGCAATTACTCTCCG
TAACTCTCCTTTTCTCTTCCCTTCTCTCACCCCCCTCTTCCTTCCCTTCC
TCGTCCAGGCCCTCCCTACAGCGAGGCCCGGCTGCTGGCTCTAGCGGCTC
TCTATGAACAAGCACATCCCTTCCACGCGCTTGTGCCACGCGAGCCCGCG
CACACCGCCGACGAAGAGGAAACGATTCCAACCATGACGGCAACGACAGC
AGCAGCAGCGGGAGCAGCGGGAGCAGCGGGAGCAGCGGTGAAGCCTCTTC
CTTTCTACCCCGGGCCGAGGACGACGGAAGAGGCGGCGGAGCTGTGTGGA
TTTAGGGTGCCACAGGAGGGAGTGCAAAGGGAAGATGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGTAGGGGAGTGGGAAGAT
CATTTCTGTGA

Coding sequence (CDS) from alignment at chr30:452477..457887-

>NO30G01250.1 ID=NO30G01250.1|Name=NO30G01250.1|organism=Nannochloropsis oceanica|type=CDS|length=2031bp|location=Sequence derived from alignment at chr30:452477..457887- (Nannochloropsis oceanica)
ATGGACGACACAATCGCAGGAACAGGCGAAGTTGAGTCTGCCCGTATCCT
GGCAGCCGCTGGAACCGGAACGTGGTGGGGCAAGACAGCCGTCGAGGTTA
TCGAGGCCTTGAAAAACGGCGAAGTCACGCCCTTGGAGCTCTTGGACGTG
GCCGAGGCCCGCATACGCGCGACTGATGACGTCCTGAACGCCACGCCCAT
CCTCTGTGTGGACCGTGCGCGTGAACATGCCCGTCGAATCTCCACCCCTT
CCTCTCTCTCGCCCTCCTTCCTGCCCTCTTCCTCATCCACCTCCTCCTCG
TTGAAGTTCCCGAGAGGATACTTGCATGGCTTACCCTTGTTGGTCAAGGA
CGTGACAGCTGTCGCTGGGGTGCCATTTACCAAGGGCAGCTCTGTGATTG
CTGCTGCTGCTGCCGTTGCCCCCCCTCCTTCCCCTCCATTCGTGCGCCTG
CTCGAGGAGAAGGGAGGGGTGATAATGGGGAAGACAAACACTCCCGAGCT
GGGAGCGGGAGCACAGACCTTTAACTCTGTGTTTGGCACGACAAACAACC
CGTGGGATGTGAGGTTGACGCCGGGGGGCAGCAGCGGAGGCACTGCAGCA
GCGCTCGCAGGAGGACAGGCTTGGCTCGCTACCGGCAGCGACCTAGGAGG
GAGTCTGCGCATCCCTGCGTCTTTCTGCGGAGTCGTCGGCCTGCGACCCA
CACCTGGACGAGTGGCTGGAGCAGCCCATCCGTGGCTGCAGCAGCAGCAG
CAGGAGAGGAAGGAGAGGAAGGAGGGAGGGAGGGAAAAACTGATGGTGGT
GGAAAAGAGGAAGAAGAAGAGGGAGGAGGAGGAGGAGGAGGAAGGAAAAG
ACGAAGAAGAAGAAGAAGAGGAGGAGGAGGGTATGCTTGATCCGCGGCAT
GCGTTTTTGGCCGGTGTGGAGGGACCTATGGCTCGAAATGTGGGAGATCT
GGCTTATTTTTTCGACAGCATGGTGCCCCGTCGGACTGTAGAGGAGAAGG
CTTGGGGGGGAAGGGAAAGGGGGAGGGAAGGGGGGGGGAGGGAGGGAGGG
AGAGGTCTTCGCCTGGCGTTTTCGGCGGACATGGGCTTAAGCGACACCGC
TCTCATCGAGCCCGAGGTTCTAGCGCTGTGCGAGAAGGCCGCCGTCTGGT
TTGCTGCCGGGGAAGGAGGGAGGGACGGAGGGAGGGAAGGAGGGGGAAGA
AGCGGTGGAAACTGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
CGTCTCGGAAGGAATCAAGATATTCCACGTCCTGAGGGCTCGGGCCTTCG
CCTCTATGTATGGAGGACATGCCCTGTACCGGGACCCCATTCAACGGCTG
GCCGTTAAACCGGAGGTTATCTGGAACGTTGAGGAGGGCCTGAGACTGAG
TGAGGAGGCGGTGGAGGAGGCCAAGACGCAGCACCAAGCCTATGTAGGGC
GATGGCTGGCGTTCTTCCAAGATTTTGACTTCTTGCTCACACCCACCGTG
ATGCTCCCTGCCTTCGACGCACGCCTGCGTTATCCTACCCGGATAGCTTC
CACCTTCCTTCCTTCCTACATCGACTGGCTGCGTCTCTCATCGGTCGTCA
CGCTCTCCTGTGGACCTGCACTCTCCCTGCCCTGCGGTCTCACGCACGAC
GGACGGCCGGTGGGACTGCAAATCATAGGCCCTCCCTACAGCGAGGCCCG
GCTGCTGGCTCTAGCGGCTCTCTATGAACAAGCACATCCCTTCCACGCGC
TTGTGCCACGCGAGCCCGCGCACACCGCCGACGAAGAGGAAACGATTCCA
ACCATGACGGCAACGACAGCAGCAGCAGCGGGAGCAGCGGGAGCAGCGGG
AGCAGCGGTGAAGCCTCTTCCTTTCTACCCCGGGCCGAGGACGACGGAAG
AGGCGGCGGAGCTGTGTGGATTTAGGGTGCCACAGGAGGGAGTGCAAAGG
GAAGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
GGGTAGGGGAGTGGGAAGATCATTTCTGTGA

Synonyms

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