NO30G00930.1, NO30G00930.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO30G00930.1
Unique NameNO30G00930.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2106
Alignment locationchr30:344196..351374 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:344196..351374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO30G00930.1 vs.
Match: EWM26285.1 (uncoordinated family member (unc-43) [Nannochloropsis gaditana])

HSP 1 Score: 359.8 bits (922), Expect = 2.000e-95
Identity = 188/386 (48.70%), Postives = 251/386 (65.03%), Query Frame = 0
Query:  327 DGEDTMNGADFDSVYMLSKKLGEGAFGLVFLCIHRETKKKCAVKVVDTSRLNLDDARHMEDEIDILKSLNHVHIVELFHVFRTDRTVYIVQELCAGGELFDRIVEKTHYNEGDARELIKRVLQAVSYAHAQGIVHRDLKPENILLREPEDDVHVKLADFGLAHRLLGMEALTTICGSPGYMAPEILSEAPYNEKADVWAVGTILFCLLGGYNPFEGRSTVITIARIKAGKYSFPSPYFDHVSEDAKDLIRCMLVVNQEKRLSARACLEHKWFALAEASLQGHDLTVSKDKMREVLRGKR-AFKAAGNAVIMMNRLKMFSTGESLASGRKDIS---------------LTKSPSVASTVSLDSSGHSS--NPILEGATTKNLHSISP 695
            D ED      F+ +Y L +KLG G +  V+ C  R ++ + AVKV+   +++  +   +E+EI ILKSLNH  IV L HVFR  R +YIVQELCAGGELFD IVE++ Y+E DARE ++ +++A+SYAHA+G+VHRDLKPENILL   +D   +KL DFG++HRL GM+ L TICGSPGYMAPEI+ E PY+EK DVWA G ILFCLL GY PFE +S  + +A+IK G YS   P F  VS++AKDLI+ MLVV+  +R++ARACLEHKWFAL    L   +LT ++D ++E +  ++   K+   A+I+ NRL +  TGESL+  +  +S                T S   +S  SLDS   SS  N  L G T  + H+  P
Sbjct:   49 DFEDLPANIAFNDIYELEEKLGSGTYATVYKCRRRGSQLRRAVKVLHLQKISRQERLLIEEEISILKSLNHDGIVRLHHVFRNPRRIYIVQELCAGGELFDSIVERSRYSEADAREAMRAIMEAISYAHARGVVHRDLKPENILLASKKDPTRLKLCDFGMSHRLKGMDCLKTICGSPGYMAPEIVKEEPYDEKVDVWAAGAILFCLLAGYQPFEDKSMPMMLAKIKRGFYSLRHPVFRQVSDEAKDLIKHMLVVDPRRRVTARACLEHKWFALNSEKLD-RELTTAQDMLKEQINSRKFRLKSVAGAIILANRLSLLRTGESLSQRKSSVSDSTESSSSLTSATTRSTASSISSSNASLDSFAQSSPANSSLLGTTPSSAHASPP 433          
The following BLAST results are available for this feature:
BLAST of NO30G00930.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26285.12.000e-9548.70uncoordinated family member (unc-43) [Nannochlorop... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G00930NO30G00930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO30G00930.1NO30G00930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO30G00930.1.cds1NO30G00930.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds2NO30G00930.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds3NO30G00930.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds4NO30G00930.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds5NO30G00930.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds6NO30G00930.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds7NO30G00930.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds8NO30G00930.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds9NO30G00930.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds10NO30G00930.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds11NO30G00930.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds12NO30G00930.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds13NO30G00930.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds14NO30G00930.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds15NO30G00930.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds16NO30G00930.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds17NO30G00930.1.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO30G00930.1.cds18NO30G00930.1.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO30G00930.1 ID=NO30G00930.1|Name=NO30G00930.1|organism=Nannochloropsis oceanica|type=mRNA|length=2106bp
ATGCCTCGAGCCGCCTTCCTCCCGACCCGACACGCCATCATCTTCCTCTC
CTTCCTCCCCCTCTTCCTCCTCCTCATCCCCCTCGTCCCCGTACCCTGCG
TTTCCTCCTTCTCCTTTATCAACCCCATTTCTATTGGGAGTAGCAGCAGA
AGCGTCAGTGGCACCAGCAGGCGTAGCAGCGTTAGCAGAACCAGCAGCGA
GAAGAGCATCAGCAGCAGCAGTACAGGCATGTCCTCTTCCTTCCTTCCCT
GCCGACCATCGTTCATCGAGCCCGAGGAATTACTAGCTCTCCTCCAGGCA
CAACGACAGGGAGTTAAATCTCCCACAATAAAGATCGTAGACGTGCGTGA
CGACGACTTTGAAGTGGCCAAACTGCCGGGGGCGATAAACGTGCCAAGTG
AAGAGTGGCATGAAGACGAGCGGGTGGATACCTTGGTACAGGAACTCAAG
GACTATGACCTGGTGATCTTCCATTGCATGCTCTCTCAAGTCCGTGGTCC
CAAGTGCAGCAACCGCTTTCGAGCTCGTCTCTCAGTCTTAAAAGTAGACG
AAGAGGAAGAGGAGGAGGAAGAGGGAAGGAGGGAAGGAGGGAAAGAGGGA
GGGAGGCCTCGGGTGTTCGTTTTGAGAGGGGGCTTTCAGGGATGGTATGC
GAGGTTTTCTAAGGGGCAGCCAAAGCCAGCAAGAGCGCAAGTCGAGCAAC
AGCAGCAGCAGCGTCTTTCTATCGGTCGCGTCGCACCACCACCACAACAG
CAACAAACCCGTCGACGAGAACAGCAATTAAAAGCAATGGGCAACAAATC
AAGCAGTAGCGCCAGTAGTAGCAGGGGCGGACAGCGGAATTCTGTGGATA
AGGCAGGACTGCCAACATCCGTGCGAGCAAAGGCATCTTCAGACGCCTTA
AATCAGCACCTGGCGTCGGAGGAGGAGGAAGAGCGCAAGGACGAGGTCCC
TCACAAGGCCAGGGGGGGGAAGCGCATGGACGGGGAGGACACGATGAACG
GCGCGGACTTCGACAGTGTCTATATGCTATCCAAAAAGCTCGGCGAAGGT
GCTTTCGGGCTGGTCTTCCTCTGCATCCACCGAGAGACCAAGAAAAAGTG
TGCGGTCAAGGTCGTCGATACCTCCAGGCTGAATCTCGATGATGCCAGAC
ACATGGAGGATGAAATTGATATCCTCAAGTCCCTCAACCACGTGCATATC
GTCGAGCTCTTCCATGTTTTCCGCACCGACCGCACCGTCTATATCGTCCA
AGAACTCTGCGCAGGAGGAGAACTTTTCGACCGCATCGTCGAAAAGACGC
ACTACAACGAAGGCGACGCCCGAGAGCTCATAAAACGCGTTCTTCAAGCT
GTCTCCTACGCCCATGCTCAAGGCATTGTTCACCGTGACCTTAAACCAGA
AAACATCCTTCTCCGCGAGCCAGAAGATGACGTGCACGTCAAACTCGCTG
ATTTCGGCCTCGCCCATCGGCTGCTCGGCATGGAAGCACTCACCACCATC
TGCGGTTCTCCGGGTTATATGGCTCCGGAGATTCTGAGCGAAGCCCCATA
CAATGAAAAGGCCGATGTATGGGCCGTGGGAACGATTCTCTTCTGTCTAT
TAGGAGGCTATAATCCTTTCGAGGGGCGGTCCACAGTCATAACTATCGCC
CGCATCAAGGCTGGGAAGTATTCGTTCCCCTCCCCCTACTTCGATCACGT
CTCCGAGGATGCCAAAGACCTCATCCGCTGCATGCTTGTGGTCAATCAAG
AGAAGCGTCTGTCGGCCCGCGCCTGCTTAGAGCACAAATGGTTTGCCTTG
GCCGAGGCTTCCCTGCAAGGGCACGACCTGACCGTCAGTAAGGACAAAAT
GCGGGAGGTGCTTCGAGGCAAGCGAGCGTTCAAGGCGGCTGGCAACGCTG
TGATCATGATGAATCGTCTCAAGATGTTCAGCACGGGCGAGAGCCTTGCC
TCGGGGAGGAAAGATATCTCCCTCACCAAAAGCCCGTCGGTCGCCTCCAC
CGTCTCCCTGGACAGCAGCGGGCATTCATCCAATCCCATCCTGGAGGGGG
CAACCACCAAAAACCTGCACTCGATCTCGCCTCGGGAGGAGGTGGTAGTG
GAGTGA
back to top

protein sequence of NO30G00930.1

>NO30G00930.1-protein ID=NO30G00930.1-protein|Name=NO30G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp
MPRAAFLPTRHAIIFLSFLPLFLLLIPLVPVPCVSSFSFINPISIGSSSR
SVSGTSRRSSVSRTSSEKSISSSSTGMSSSFLPCRPSFIEPEELLALLQA
QRQGVKSPTIKIVDVRDDDFEVAKLPGAINVPSEEWHEDERVDTLVQELK
DYDLVIFHCMLSQVRGPKCSNRFRARLSVLKVDEEEEEEEEGRREGGKEG
GRPRVFVLRGGFQGWYARFSKGQPKPARAQVEQQQQQRLSIGRVAPPPQQ
QQTRRREQQLKAMGNKSSSSASSSRGGQRNSVDKAGLPTSVRAKASSDAL
NQHLASEEEEERKDEVPHKARGGKRMDGEDTMNGADFDSVYMLSKKLGEG
AFGLVFLCIHRETKKKCAVKVVDTSRLNLDDARHMEDEIDILKSLNHVHI
VELFHVFRTDRTVYIVQELCAGGELFDRIVEKTHYNEGDARELIKRVLQA
VSYAHAQGIVHRDLKPENILLREPEDDVHVKLADFGLAHRLLGMEALTTI
CGSPGYMAPEILSEAPYNEKADVWAVGTILFCLLGGYNPFEGRSTVITIA
RIKAGKYSFPSPYFDHVSEDAKDLIRCMLVVNQEKRLSARACLEHKWFAL
AEASLQGHDLTVSKDKMREVLRGKRAFKAAGNAVIMMNRLKMFSTGESLA
SGRKDISLTKSPSVASTVSLDSSGHSSNPILEGATTKNLHSISPREEVVV
E*
back to top

mRNA from alignment at chr30:344196..351374-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO30G00930.1 ID=NO30G00930.1|Name=NO30G00930.1|organism=Nannochloropsis oceanica|type=mRNA|length=7179bp|location=Sequence derived from alignment at chr30:344196..351374- (Nannochloropsis oceanica)
ATGCCTCGAGCCGCCTTCCTCCCGACCCGACACGCCATCATCTTCCTCTC CTTCCTCCCCCTCTTCCTCCTCCTCATCCCCCTCGTCCCCGTACCCTGCG TTTCCTCCTTCTCCTTTATCAACCCCATTTCTATTGGGAGTAGCAGCAGA AGCGTCAGTGGCACCAGCAGGCGTAGCAGCGTTAGCAGAACCAGCAGCGA GAAGAGCATCAGCAGCAGCAGTACAGGCATGTCCTCTTCCTTCCTTCCCT GCCGACCATCGTTCATCGAGCCCGAGGAATTACTAGCTCTCCTCCAGGCA CAACGACAGGGAGTTAAATCTCCCACAATAAAGATCGTAGACGTGCGTGA CGACGACTTTGAAGGTTAGTCGAAACATGGAAGAGGGAGAGGGGGAGGGA TCGCAAGAGGGAGGGAGGGAGGGTGGGTGGGTGGGCTACTTGTCTTGGCA TAATTTATTTCGATTCGTAGAATCACGAGAACAACACAACGAAAGGGAAG GGTAAACAGGAGAGAGCTGGGGAGGGAGGGAGGGAGGACTTGCACTCAAA TATAGCCTATTCTTATACACATGCCATAAATCGATACAGTGGCCAAACTG CCGGGGGCGATAAACGTGCCAAGTGAAGGTGAGGTAGCGAGAGGGAGGGA GGGTGGGTGGGAGGGAGGAAGGGGGGGGGCGAAGGGAGGGAGAATTATGT GTAATAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAATAGTATCAATAT GTGTTATCATATGTACATGAAAATACACGTTTTGGGGGCGGGAACCCTAT CATGGTGACGACAGAGTGGCATGAAGACGAGCGGGTGGATACCTTGGTAC AGGAACTCAAGGTAAGCCCTCCTTCTCTCCCTCCCCATCTTCCCTCCCTC CCTCTCTCCTCTTCCTCTTTCTCTCTTTCCCTGCCTTCGTTTCTCAGGAC CATGACCCGACCTAATAAAGTTCCATTGCATGTCCTCTCACGGCCTTGAC CCTCACTGCAGCTCTTTCTCCCTCTACCCTCGCTCCCTTTGTTACTCCCT CCCTCCCTCCCTCCCTCCCTCAGGACTATGACCTGGTGATCTTCCATTGC ATGCTCTCTCAAGTCCGTGGTCCCAAGTGCAGCAACCGCTTTCGAGCTCG TCTCTCAGTCTTAAAAGTAGACGAAGAGGAAGAGGAGGAGGAAGAGGGAA GGAGGGAAGGAGGGAAAGAGGGAGGGAGGCCTCGGGTGTTCGTTTTGAGA GGGGGCTTTCAGGGATGGTATGCGAGGTATAGAAAAGAGATAGGCATGGT GGTGCCATGCGAGGATGAGTAGGGAGAAAGGGAGGGAGGGAACGCTGGAG AGAGGGGGAAGGGACCATATAGAGGAGGGCAACGAGCAGTAATAAAGAAA AGAATGGGGAATAAACATTCTAAAAAGCAATACGCAGCGGCATCTTTTTT GTAATCCTAATGTCCATCTTGTTGTTGTTATTGTTGTTGTTTTGGTTGGT GGTAGTGTTGTTCCTCTTTTCTCCACAAGCCGGGGCATCGTTTTTGTCCC TCTTCGGATTATCTTCGGTGATATCTCCCTTCCCAAGTCCAGCTCCCGTC TCTTTCTCACAAAGTCAAGAAATAAAGCATTAACAGTAACATGACACATT CAGCTGCTATAACAACCACCACAATTAAATCAACATGTGCACCACTACAA CCAATCGTAGCAGCAGCAAGCAGTCGCAACCTACGCCACTGGCCACTGCT GCCATCGGCTGCTGCCTCCCATTTTTCTCGAGGCCTTATCGTGTCTAAAT CGAGGACGTGCCGCTGTGCTTTCCTTGAATCAGACTGGGCCGACCCCCAT TGATTGATTCACAACATCAATATTACTACTGTTTCACTCTATGTTCACAC ACGAACCAGCCCCCACCCACTGACGGGGGCATGTTGCAATGATGGTCAAG CCAAAAAATTGTGCCGTGAAGGCTCTTCCTCTCTTTCTTCACTTGGCTTG TGAGGTTGGACGACGTCGCTTTCGTGCATTTGCCGCCGGCTTGGCCCGAG CCCCCCTCTTTTTTTTTCCCCCATGCGATTTACGTGTGAGAGGATGAGTC AGTCATAAACCTGCTCACTATAGCTTCGACTGTTTCGCCACGCGACAGGT TTTCTAAGGGGCAGCCAAAGCCAGCAAGAGCGCAAGTCGAGCAACAGCAG CAGCAGCGTCTTTCTATCGGTCGCGTCGCACCACCACCACAACAGCAACA AACCCGTCGACGAGAACAGCAATTAAAAGCAATGGGCAACAAATCAAGCA GTAGCGCCAGTAGTAGCAGGGGCGGACAGCGGGTAAGAAGGCAGAGGGAG GGAGGGAGGGAAGGAGCACGTGCTCATGCTGCCCGAGGGCGGGGATTTCA GATCGATCGAGTGGAGAGTAGGGCAGGGTCAGAAGTGGCAGGAAAGCCTC ATCCATACATATAGACAACCTCAGACATAACTCATGCATCAGAGAATGGC GTTATGCTCCCTCCCTCCCTCCCCTCCCTCCTTTCCTCCTTTCCTCCCTC CCTCCCTCCCTCCCCCCTCATTATATCTCATTCTACACTCCCTCTCTCCC TCCCTCCCTCCCTCCCTCCCTCCCTTCCACAGAATTCTGTGGATAAGGCA GGACTGCCAACATCCGTGCGAGCAAAGGCATCTTCAGACGCCTTAAATCA GCACCTGGCGTCGGAGGAGGAGGAAGAGCGCAAGGTCGGTGGAGGGAGGA AGGAGGAAGGGAAGAATAAGGGGAGGTGCTTTTGGTGGAGGGAGAGGATG GAAGGAGAAGGACGAGGGAGGAGAAAGGATAAGGTGGTGGTGCAGGAGGA CGAGGGGAAGATGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAGAGA AGAAGGAGGAGGAGGAGGAGGAGGAGGAGGGCAGGGAAGAAAATCTGAAA GGCGGGATGAGGTAATCGATACCCCAACTCACCTAACCATTGACCTCCCT CCCTCTTTCCTTCCCTTCCTTCCTTCCTTTCTCCTTCCCTCCCGCCCTAG GACGAGGTCCCTCACAAGGCCAGGGGGGGGAAGCGCATGGACGGGGAGGA CACGATGAACGGCGCGGACTTCGACAGTGTCTATATGCTATCCAAAAAGG TGAGGAAGGAAGGGAGGGAGGGAGGGAGAAAAGGAGTGAAGGATTGCTCG GAAGTAGAATGGGGTGGTTGAGTGTCGGAATGACGATGGGCTGGAGGAGG CGGACATATGACAGGAAGGAAAGGCGAGAAAGAATGGAGAATGAAAGGAA AAGAGGGAAGGAGGGAGTCCGGGGGGCGGTACGACCATTCGCCTCAAAGG AAGGAAGGGGGGAGGGCAAGAGAGAGGGAAGAAAGACAATCACACCAGCT CCTCCTCCCCCTCCTCCTCATCCTTCTTCCCCCTCCCCCTCCCCCTACTC CACCTTCCCTCAGCTCGGCGAAGGTGCTTTCGGGCTGGTCTTCCTCTGCA TCCACCGAGAGACCAAGAAAAAGTGTGCGGTCAAGGTCGTCGATACCTCC AGGCTGAATCTCGATGATGCCAGACACATGGAGGATGAAATTGATATCCT CAAGGTATGTGCCTCCCTCCCTTCTTTCCCTCCTTCTCCTCCCTTTTTCC CCTTCTTTCTTTTCTCCTTCATATGTCCGCCTCCTCGAGCCCGTCATTCC AACACCCATATCTTACCGCACATCTACTCCACCTCCCCCCTCAAAAAGGT CGTCTGATATACATCACTGACCCGCTCCTCCCTCCCTCCCTCCCTCTCAA TAGTCCCTCAACCACGTGCATATCGTCGAGCTCTTCCATGTTTTCCGCAC CGACCGCACCGTCTATATCGTCCAAGAACTCTGCGCAGGAGGAGTAAGTA CCCCTCCCTCTCTCCCTCCCTCCCTTCCTCCCTCTGTTGTTGACCAAAGG AAGTTTTTTTTCGCTAATCAATCCATTTTTTAAATTGATTTGTCCATGAT GTTTATTCTACAGATATTTAATTACACAATTTGCTTCTATCTGCTTATCT ATTCACAAAGAAAGTACTTATTCAATTTTTTATACATTTTATTTTATTTT ATTTATTCATTTACTCAATATATATATTTAAATTGATTATTTATATCGTA TAATTATTTATTTTTGGTCATTATTATAATTTATTTATTTATTGATAAAT AAATCCCATATTTCATGTATTTAATCACAAGAATTAGTTGACTACATCAT CGAGAAGACGCACTACACCGAAGGCGACGCCTGATTTAATTTTATTAATT TATTTTATTTATTTATTTTATTTTATTTATTTTATTTATTAATTTATTTT TTACTCTCAAATTCATAAACACATGCGTTCATTCACAGGAACTTTTCGAC CGCATCGTCGAAAAGACGCACTACAACGAAGGCGACGCCCGAGAGCTCAT AAAACGCGTTCTTCAAGCTGTCTCCTACGCCCATGCTCAAGGCATTGTTC ACCGTGACCTTAAACCAGGTGCGCCTTCCTTCCCTCCCTCCCTCCCTCCC TCCCTCCTTCCCTCCCGTGCTCAAGCTATTGTCCACCGTGACCTCTAAGC CAAGTAAGCAAGCTCTCCCATCTTCACACCCTCCTTCCTTCCCTCCCTCC CTTTCTCCCGATGGTGTCTACTTCTCCGAGCTTGTCTCAATGAGTACTTA CACATTTCCCTTTTCGTTTCCACTCGACTGACCCCTCCCTCCCTCCCTCC CTCCCTCCCTCCCAGAAAACATCCTTCTCCGCGAGCCAGAAGATGACGTG CACGTCAAACTCGCTGATTTCGGCCTCGCCCATCGGCTGCTCGGTAGGGA GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAA GTATGTAATCAGGCTCAACAGGAGGGCGAGAGGGAGGGAGGGAGGGAAGG AAGGTGTATTATCAGATCAGCAGAATAATAATATGTCAATAAATGATCCC TTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCTTAGGCATGGAAGC ACTCACCACCATCTGCGGTTCTCCGGGTTATATGGCTCCGGAGATTCTGA GCGAAGCCCCATACAATGAAAAGGCCGATGGTACGTCCCTCCCTCCCTCC CTTCATTATTGGCTGTAAGGAGGAGGCGTGTCCAAGATTATGTTGATTCA GTTGTTTTACCGTCTGACATGACACAAGAGAGCCGATGAGAGGGAGGGAG GGAGGGAGGGAGGGAGGGAAGGGAGGGAAGGGAGGGAGGGAGGAAAGAAG AAGAGAGGGGAGGATGGTTGCACAACACATTTTATGCTCACCTACCCCTC CCCATCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTCCCTGCCTCCC TCGATGGGCAGTATGGGCCGTGGGAACGATTCTCTTCTGTCTATTAGGAG GCTATAATCCTTTGTGAGTAGTCTTAGGGATGGAGGGAGGGAGGGGTAGA CAAGCCTTCACTCTATTGCGCGTTTCTCCCTCTCGTTTCTTCCCTCCTCA TCACATATCCGTCTCCTCAAGCCCGTCATTCCGACACCCGTGTTATCTCG TCCTTCATTTCCATTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT CCCTTCCTCCCTCCCTCCCTTCCTCCCTCAGCGAGGGGCGGTCCACAGTC ATAACTATCGCCCGCATCAAGGCTGGGAAGTATTCGTTCCCCTCCCCCTA CTTCGATCACGTCTCCGAGGATGCCAAAGGTAAGGCCTCCCTCCCTCCCT CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC CTCCCTCTCCTCCCTCCCTCCCTCCCTCTCCTCCCTCCCTCCATTCCCAC CATATCTTCGTCTCCTCCAACCCGTCATTTGAAAACCCATATTCCCCATA CACTTCCCACTCATATTCTTCCACCGACCTCGACCTCCGTCCCTCCCTCC GTCCCTCCCTCCACCCAGACCTCATCCGCTGCATGCTTGTGGTCAATCAA GAGAAGCGTCTGTCGGCCCGCGCCTGCTTAGAGCACAAATGGTTTGCCTT GGCCGAGGCTTCCCTGCAAGGGGTGAGGGAGGGAGGGAGGGAGGGAGGGA GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGGGAGTGGAGGGAGTGA GGGAGGGGAGGGAGGGAGGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGG AGGGAGTGAGGGAGGGAGGGAGGGAGGAAAAGAGAGAGAAAGCGAACCAA AGCTACAATTACACCGCACTAAGCATCCCTTTCCCATTTCTCCCCCTCCT TCCTCCCTCCCTCCCTCCCTCCCTCCAGCACGACCTGACCGTCAGTAAGG ACAAAATGCGGGAGGTGCTTCGAGGCAAGCGAGCGTTCAAGGTGGGCAGA CAGACAGAGCCCGCCCTACTACCCTTCCTCCAACCCTTTCTCCCTCCCTC CCTCCCTTCCCCCCGCCCTCGTTCTTTCAGTCTACTTTTTTTTCATTCCA TGTCTTCATTTGTCTTCCCTCCCCATCACATGTCCGCCTCCTCAAGCCCA TCATTCTGAAACTCATATCTCCCATGCACTTCCCCGAAACATTTCCCTCG CTCCCTTCCTCCTTCCTTCCCTCCCTCCCTCCCTCCCTTCTTCCCTTCCT CCCTCCCTCCCTCAGGCGGCTGGCAACGCTGTGATCATGATGAATCGTCT CAAGATGTTCAGCACGGGCGAGAGCCTTGCCTCGGGGAGGAAAGGTAGGG AGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAAATGT GACAGCCCTGTTTAACGTTGTTGTGTTCTCCTCCCTCCCTCCCTCCCTCC CTCCCTCCCTCCCTCCCTCCCCATCATGATTCCTTCTCCTCCAGCCCGTC GTCCTGACTCCCATGCCATATCTCCCATCTGCTCCCCCCCCAAATCACGC TCTCCTATCCCCCTCCCTCCCTCCCTCCCCCCCTAGATATCTCCCTCACC AAAAGCCCGTCGGTCGCCTCCACCGTCTCCCTGGACAGCAGCGGGCATTC ATCCAATCCCATCCTGGAGGGGGCAACCACCAAAAACCTGCACTCGATCT CGCCTCGGGAGGAGGTGGTAGTGGAGTGA
back to top

Coding sequence (CDS) from alignment at chr30:344196..351374-

>NO30G00930.1 ID=NO30G00930.1|Name=NO30G00930.1|organism=Nannochloropsis oceanica|type=CDS|length=2106bp|location=Sequence derived from alignment at chr30:344196..351374- (Nannochloropsis oceanica)
ATGCCTCGAGCCGCCTTCCTCCCGACCCGACACGCCATCATCTTCCTCTC
CTTCCTCCCCCTCTTCCTCCTCCTCATCCCCCTCGTCCCCGTACCCTGCG
TTTCCTCCTTCTCCTTTATCAACCCCATTTCTATTGGGAGTAGCAGCAGA
AGCGTCAGTGGCACCAGCAGGCGTAGCAGCGTTAGCAGAACCAGCAGCGA
GAAGAGCATCAGCAGCAGCAGTACAGGCATGTCCTCTTCCTTCCTTCCCT
GCCGACCATCGTTCATCGAGCCCGAGGAATTACTAGCTCTCCTCCAGGCA
CAACGACAGGGAGTTAAATCTCCCACAATAAAGATCGTAGACGTGCGTGA
CGACGACTTTGAAGTGGCCAAACTGCCGGGGGCGATAAACGTGCCAAGTG
AAGAGTGGCATGAAGACGAGCGGGTGGATACCTTGGTACAGGAACTCAAG
GACTATGACCTGGTGATCTTCCATTGCATGCTCTCTCAAGTCCGTGGTCC
CAAGTGCAGCAACCGCTTTCGAGCTCGTCTCTCAGTCTTAAAAGTAGACG
AAGAGGAAGAGGAGGAGGAAGAGGGAAGGAGGGAAGGAGGGAAAGAGGGA
GGGAGGCCTCGGGTGTTCGTTTTGAGAGGGGGCTTTCAGGGATGGTATGC
GAGGTTTTCTAAGGGGCAGCCAAAGCCAGCAAGAGCGCAAGTCGAGCAAC
AGCAGCAGCAGCGTCTTTCTATCGGTCGCGTCGCACCACCACCACAACAG
CAACAAACCCGTCGACGAGAACAGCAATTAAAAGCAATGGGCAACAAATC
AAGCAGTAGCGCCAGTAGTAGCAGGGGCGGACAGCGGAATTCTGTGGATA
AGGCAGGACTGCCAACATCCGTGCGAGCAAAGGCATCTTCAGACGCCTTA
AATCAGCACCTGGCGTCGGAGGAGGAGGAAGAGCGCAAGGACGAGGTCCC
TCACAAGGCCAGGGGGGGGAAGCGCATGGACGGGGAGGACACGATGAACG
GCGCGGACTTCGACAGTGTCTATATGCTATCCAAAAAGCTCGGCGAAGGT
GCTTTCGGGCTGGTCTTCCTCTGCATCCACCGAGAGACCAAGAAAAAGTG
TGCGGTCAAGGTCGTCGATACCTCCAGGCTGAATCTCGATGATGCCAGAC
ACATGGAGGATGAAATTGATATCCTCAAGTCCCTCAACCACGTGCATATC
GTCGAGCTCTTCCATGTTTTCCGCACCGACCGCACCGTCTATATCGTCCA
AGAACTCTGCGCAGGAGGAGAACTTTTCGACCGCATCGTCGAAAAGACGC
ACTACAACGAAGGCGACGCCCGAGAGCTCATAAAACGCGTTCTTCAAGCT
GTCTCCTACGCCCATGCTCAAGGCATTGTTCACCGTGACCTTAAACCAGA
AAACATCCTTCTCCGCGAGCCAGAAGATGACGTGCACGTCAAACTCGCTG
ATTTCGGCCTCGCCCATCGGCTGCTCGGCATGGAAGCACTCACCACCATC
TGCGGTTCTCCGGGTTATATGGCTCCGGAGATTCTGAGCGAAGCCCCATA
CAATGAAAAGGCCGATGTATGGGCCGTGGGAACGATTCTCTTCTGTCTAT
TAGGAGGCTATAATCCTTTCGAGGGGCGGTCCACAGTCATAACTATCGCC
CGCATCAAGGCTGGGAAGTATTCGTTCCCCTCCCCCTACTTCGATCACGT
CTCCGAGGATGCCAAAGACCTCATCCGCTGCATGCTTGTGGTCAATCAAG
AGAAGCGTCTGTCGGCCCGCGCCTGCTTAGAGCACAAATGGTTTGCCTTG
GCCGAGGCTTCCCTGCAAGGGCACGACCTGACCGTCAGTAAGGACAAAAT
GCGGGAGGTGCTTCGAGGCAAGCGAGCGTTCAAGGCGGCTGGCAACGCTG
TGATCATGATGAATCGTCTCAAGATGTTCAGCACGGGCGAGAGCCTTGCC
TCGGGGAGGAAAGATATCTCCCTCACCAAAAGCCCGTCGGTCGCCTCCAC
CGTCTCCCTGGACAGCAGCGGGCATTCATCCAATCCCATCCTGGAGGGGG
CAACCACCAAAAACCTGCACTCGATCTCGCCTCGGGAGGAGGTGGTAGTG
GAGTGA
back to top
Synonyms
Publications