NO30G00860.3, NO30G00860.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO30G00860.3
Unique Name	NO30G00860.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2691
Alignment location	chr30:307804..314895 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr30	genome	chr30:307804..314895 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO30G00860.3 vs.
Match: CBJ25453.1 (alternative oxidase, mitochondrial protein [Ectocarpus siliculosus])

HSP 1 Score: 355.9 bits (912), Expect = 2.900e-94
Identity = 209/488 (42.83%), Postives = 277/488 (56.76%), Query Frame = 0

Query:  173 AMFDCGSVQSGKAGTFLIEEGSDEEDQAEKTEKRRAARQEREIFFLLDGQVRIQVRGQKVARLNQGDFLGEASFVTNRTGPRSVTAICSGETGAHYIVWNQAKLHAFLEGGKQGGKEGGGKVDAHASLSGQDHTLNELRNALTELWVRQLSKKLALTMATYERGWQPTDELEADERKYEGDFGFRNSSAFGISGPADELSKAIPSSAFKLAQWNFLREYQAIRRSFRFYEYSNVFQGLRRSVGTSSPYMDAVAVIRKLIIGAFGAIDLTLEWFGIFPTLRPSRAYMSENQQVVDLQARLRLLTLSNEAISKREETRREIQIELIDQAQAQGVGMAAKMKQSGTPWFVILPYYALCAFLDIVYEGRPLARFWFLETVARMPYFSYISMLHLYETLGWWTIGTDVRRVHFAEEWNELHHLQIMESLGGDARWLDRFLARHSAILYYWVLNVFFLVSPRLAYNFSELIESHAVDTYSQFLEENEELLKKLP 661
            A+   G V S K    LI +G   ++  +           R+++ L DG+ RI+V+G+ VA +  GDF+GEASF + R  PR+ T     +     + W    L AF++  K                          + AL  +W+  L+ KL   M+    G Q   EL  +++   GD+G+R            E+   +P SA  LA W F REY+A+RR+FRF E+ +                         I G F  ID  LE   +FP LRPSR  + ++ +VVDLQ RL  L LSN+AI  RE  R       ++    +G+  A  + +S TPW+V+ PY ALC FLD+V+E RP+ RFWFLETVARMPYFSY+SML LYETLGWW+   +VR+VHFAEE+NE+ HL+IMESLGGD RW DRFLARH+AI+Y+ VL + +LVSP LAYNFSELIESHAVDTY++F E NEELLK LP
Sbjct:   36 ALLKVGEVISLKGSELLISQGDTYDEPGD-----------RQLYLLSDGECRIEVKGKPVASIAPGDFVGEASFTSGRVQPRTATVRAKSDE-IRVMAWTWRDLQAFMDNPKN----------------------LRTKAALQAIWMEGLAGKLNDVMSAL--GGQSVVELAEEDKTRAGDYGYRYLE------DTREVESIVPISASTLAWWTFTREYRALRRTFRFGEFKDTG-----------------------IAGPFSIIDRFLET-SVFPVLRPSRVDLPQDPEVVDLQNRLNELKLSNKAIEDRETARIAATKAFLEDESRKGLRAAGYILRSQTPWYVMAPYKALCWFLDVVFEDRPIQRFWFLETVARMPYFSYLSMLFLYETLGWWSGAAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFSVLILGYLVSPFLAYNFSELIESHAVDTYTEFAEANEELLKSLP 457

The following BLAST results are available for this feature:

BLAST of NO30G00860.3 vs.

BLAST of NO30G00860.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ25453.1	2.900e-94	42.83	alternative oxidase, mitochondrial protein [Ectoca...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO30G00860	NO30G00860	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00860.3	NO30G00860.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00860.3.cds1	NO30G00860.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds2	NO30G00860.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds3	NO30G00860.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds4	NO30G00860.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds5	NO30G00860.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds6	NO30G00860.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds7	NO30G00860.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds8	NO30G00860.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds9	NO30G00860.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds10	NO30G00860.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds11	NO30G00860.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds12	NO30G00860.3.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds13	NO30G00860.3.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds14	NO30G00860.3.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds15	NO30G00860.3.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds16	NO30G00860.3.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds17	NO30G00860.3.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds18	NO30G00860.3.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00860.3.cds19	NO30G00860.3.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr30:307804..314895+
coding sequence from alignment at chr30:307804..314895+

mRNA sequence

>NO30G00860.3 ID=NO30G00860.3|Name=NO30G00860.3|organism=Nannochloropsis oceanica|type=mRNA|length=2691bp
CAGAACATCCAACGCACCACATTCCACGCGGCCGGGACTAGGCCGCTCGT
CATGACACGCAGCGGCAGCTGCAGGAGCAGGAGCATGGACAGCAGTGTCA
GAATCAGAGGCCCACGACCACTCCATCGAAAAAGATATTTGCCCTCAAGT
CCCCGCAGTGTGCATGGCAGGTCTCTCATCCGTCTTTTTTTCCATTGCCT
TGTGCTGGCCCACATCGTCGTTGATGCCTTCATTCCTCCGTACCCCGTCG
CCTGCCCTTCCCTTCCTGTCTCGTCAACCTTTCTCAGCATTACCCAGCGG
CAGCGGCAGCAGTTCAATACATACAGCAGCAGTATCAGCAAAAGCCTAGG
CCAGGGAGGATCAACAAGCGACAGGCGATGCTTGCTCCGACACACCGCCG
CGAGCCGTTTTGCAACGGTTAGCATCCCTCCCAACAAGAAAAAACCAGCA
ACCCCTCCCCTTCGGACTATGTCCCGTGAAGCCGCCCTTGAGAAGTGGAG
GACGTTTGTGAATGACAATCTTAATGACGCCGGCCAGAACGTGAGGGTCT
CGGTGAGGCTGGCTGATGCGATGTTCGACTGCGGTTCTGTGCAGTCAGGA
AAAGCCGGCACATTTCTCATCGAGGAAGGGTCAGACGAAGAAGACCAGGC
GGAAAAAACGGAGAAACGCAGAGCGGCACGACAGGAACGAGAAATCTTCT
TCCTCCTTGACGGGCAGGTTCGCATTCAAGTGAGAGGGCAAAAAGTGGCC
AGGCTGAATCAAGGTGATTTTCTGGGTGAGGCTTCTTTCGTGACCAACCG
CACGGGCCCTCGCTCCGTCACCGCCATCTGCTCGGGAGAGACCGGTGCTC
ATTACATAGTCTGGAATCAAGCCAAGCTCCATGCCTTCCTCGAGGGAGGG
AAGCAGGGAGGGAAGGAGGGAGGGGGGAAGGTAGATGCCCATGCCTCCCT
GTCAGGACAAGACCACACCCTGAACGAGCTCCGGAACGCCCTCACTGAGT
TGTGGGTTAGACAGCTCAGTAAAAAGCTAGCCCTTACCATGGCCACCTAC
GAGCGGGGCTGGCAACCCACGGACGAGCTAGAGGCGGACGAGCGAAAATA
CGAGGGAGACTTTGGCTTCCGAAACTCCTCGGCCTTTGGCATCTCCGGTC
CGGCCGATGAATTGTCGAAGGCGATTCCGAGCTCAGCTTTTAAACTTGCC
CAATGGAATTTTCTGCGGGAGTACCAGGCGATTCGTCGCTCGTTTCGTTT
TTATGAGTACAGCAACGTCTTCCAGGGTCTTCGTAGGTCCGTGGGAACCA
GCAGCCCGTATATGGATGCGGTGGCCGTGATTCGCAAGCTCATCATCGGT
GCCTTTGGAGCGATCGATCTGACCTTGGAATGGTTCGGCATTTTTCCCAC
CCTCCGACCGTCTCGAGCGTACATGAGCGAGAACCAGCAGGTCGTGGATT
TACAAGCACGGCTCCGTCTCCTCACCCTCTCCAATGAGGCCATTAGCAAG
CGCGAGGAAACACGGCGAGAGATTCAAATAGAACTCATCGACCAGGCCCA
AGCCCAAGGCGTAGGGATGGCGGCTAAGATGAAACAATCAGGCACCCCGT
GGTTCGTCATCCTCCCCTACTACGCCCTATGCGCCTTCCTCGACATAGTC
TATGAAGGCCGCCCACTGGCCCGCTTCTGGTTTCTGGAGACGGTCGCGCG
CATGCCCTACTTCTCGTACATCAGCATGTTGCACTTATACGAGACGTTGG
GATGGTGGACCATTGGCACGGACGTCAGGCGCGTGCATTTCGCGGAGGAA
TGGAATGAGCTGCACCACCTGCAAATTATGGAGTCGTTGGGAGGGGACGC
TCGTTGGCTCGACCGTTTCTTGGCCCGACATTCAGCAATATTGTACTACT
GGGTTTTAAACGTCTTCTTTCTGGTCTCGCCACGCCTTGCCTACAATTTC
TCCGAGTTGATTGAGAGCCACGCCGTGGACACCTACAGTCAATTTTTGGA
AGAAAATGAAGAGCTCTTGAAGAAGCTTCCCGCCCCTCGCGTTGGTGAGG
GAAGAGGGCGGGATGGAGGGCGAGGCACACATGTAGACGTGCGTGTGTAT
GGACGTGTGTGGTGGGTGTCGGTGGGTACTAATCCCATCTCCCTCCCTCT
CCGCCCCCGCCCCCTAAACCCACATGCACAGCACTAGATTACTACGTGAT
GGGCGACCTTTATATGTTTGATGAGTTCCAAACCTCCCGCCCTGTTCGTT
CCCGGCGACCGCTGATTCGCTCCCTTTACGACGTCTTCTCCGCGATCCGG
GACGACGAAAGCGAGCATGTCAAAACCATCAATGCGTGTCAAGTCTCGGA
GGAAAAGATTATCTCCCCCAACGCCGCCGCTGCAAATGCCGGTTGGGCGG
AACAGGTAGAGGAGGAGGACGAAGAGAAAATGGAAAGACGGCTCAGAGAG
GATTGGGTCAGGGAGTACGACGCTCTAGGAGTGGGAAGGCCCTGGGATGG
AGGGGAGGAGGTAGGAGCGGAAGAAGGTGAAGAGGGGGAAGACCATGACG
GGTTGGGGTGGAGCGAGGAAGTGGAGTTTCCTTAAGTATCGCACATTGGC
CGATAACAAAAAGAAATGCATTTTTTTTTTGGTCGCGCGCATGGATTTGA
CTCCACGTTGCCAAAAGCAATTACTGAATAGCTGTGATTGC

protein sequence of NO30G00860.3

>NO30G00860.3-protein ID=NO30G00860.3-protein|Name=NO30G00860.3|organism=Nannochloropsis oceanica|type=polypeptide|length=712bp
MTRSGSCRSRSMDSSVRIRGPRPLHRKRYLPSSPRSVHGRSLIRLFFHCL
VLAHIVVDAFIPPYPVACPSLPVSSTFLSITQRQRQQFNTYSSSISKSLG
QGGSTSDRRCLLRHTAASRFATVSIPPNKKKPATPPLRTMSREAALEKWR
TFVNDNLNDAGQNVRVSVRLADAMFDCGSVQSGKAGTFLIEEGSDEEDQA
EKTEKRRAARQEREIFFLLDGQVRIQVRGQKVARLNQGDFLGEASFVTNR
TGPRSVTAICSGETGAHYIVWNQAKLHAFLEGGKQGGKEGGGKVDAHASL
SGQDHTLNELRNALTELWVRQLSKKLALTMATYERGWQPTDELEADERKY
EGDFGFRNSSAFGISGPADELSKAIPSSAFKLAQWNFLREYQAIRRSFRF
YEYSNVFQGLRRSVGTSSPYMDAVAVIRKLIIGAFGAIDLTLEWFGIFPT
LRPSRAYMSENQQVVDLQARLRLLTLSNEAISKREETRREIQIELIDQAQ
AQGVGMAAKMKQSGTPWFVILPYYALCAFLDIVYEGRPLARFWFLETVAR
MPYFSYISMLHLYETLGWWTIGTDVRRVHFAEEWNELHHLQIMESLGGDA
RWLDRFLARHSAILYYWVLNVFFLVSPRLAYNFSELIESHAVDTYSQFLE
ENEELLKKLPAPRVGEGRGRDGGRGTHVDVRVYGRVWWVSVGTNPISLPL
RPRPLNPHAQH*

mRNA from alignment at chr30:307804..314895+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO30G00860.3 ID=NO30G00860.3|Name=NO30G00860.3|organism=Nannochloropsis oceanica|type=mRNA|length=7092bp|location=Sequence derived from alignment at chr30:307804..314895+ (Nannochloropsis oceanica)
CAGAACATCCAACGCACCACATTCCACGCGGCCGGGACTAGGCCGCTCGT
CATGACACGCAGCGGCAGCTGCAGGAGCAGGAGCATGGACAGCAGTGTCA
GAATCAGAGGCCCACGACCACTCCATCGAAAAAGATATTTGCCCTCAAGT
CCCCGCAGTGTGCATGGCAGGTCTCTCATCCGTCTTTTTTTCCATTGCCT
TGTGCTGGCCCACATCGTCGTTGATGCCTTCATTCCTCCGTACCCCGTCG
CCTGCCCTTCCCTTCCTGTCTCGTCAACCTTTCTCAGCATTACCCAGCGG
CAGCGGCAGCAGTTCAATACATACAGCAGCAGTATCAGCAAAAGCCTAGG
CCAGGGAGGATCAACAAGGTAATCAGCCGCGGGCCCATGCAACTGCGTCC
CCTTTCCTCAGTTCCTTCCTTCCCCCCTTCCTCCTTCACTCTATCCTTTT
CTACGCCTCTTTCACAAATTTAATACACATATAAACATACATATGTACAC
ATCTATCCGAGCCAGATTTCCTATTTTTTCCCCTTCACACGCTCTAAATT
CCTACTCTTCTTTTCACTTTTTTTTTTTTTTTTTTTTTTTAATATTTTGA
ATATCACACAAAAACAATTTACCGGTGCGAAGCAGCGACCGCAGCAACAG
TATAATGAGAAGTGGGAGTAGAAGGAGCGTACTCAGACATGCTTCAACAC
TCCTCGCCTTAGACACCGCTATCCCCCGCAGGCCCACGCGGCAGATTAAC
AATTTTCCCCCCGTTAATACGTGTGTCCTGCTCTCCATTTCGAATTTAAC
TTCCTTCCCTTCCACTACCCTCTCTATCGTACGCACATACCAAAAACACA
AACAGCGACAGGCGATGCTTGCTCCGACACACCGCCGCGAGCCGTTTTGC
AACGGTTAGCATCCCTCCCAACAAGAAAAAACCAGCAACCCCTCCCCTTC
GGACTATGTCCCGTGAAGGTCCGTCTGCTCCCTCTTTCCCATCCTCCCTC
CCTCTCCTCTTCATTCCTTTCTCCTCTTTTTCCATTTTTTTCCCGATTCT
AATATCCTTTAGAGTACACAAAAGTTAATTTTTCCTTCCTCCTCCCTCCC
TCCCTCCTTCCCTCCCTCCCTCCCTCTCTGGCAGCCGCCCTTGAGAAGTG
GAGGACGTTTGTGAATGACAATCTTAATGACGCCGGCCAGAACGTGAGGG
TCTCGGTGAGGCTGGCTGATGCGATGTTCGACTGCGGGTAGGTTGCGGAA
AAAATAAGATTTTTTGTATCTTTTGAAAAAAATCTTTTGTTTTATTCATT
AATTATATTTATTCATTCATGCATTTATGCATTCACATATTCACAGTTCT
GTGCAGTCAGGAAAAGCCGGCACATTTCTCATCGAGGAAGGGTCAGACGA
AGAAGACCAGGCGGAAAAAGTGAGGGAGGGAGGGAGGCAGGGAGGGAGGG
TTGGGAGATAAGAATTAAACCGCGTGCCCATCTATCGACGGGACGAACAT
CAATGATGTAATAAAATTTATTCACTAGATTACATCATCAATTTTCGATG
AATTAATTAAGAACCCGTTACCACCATTTCTGCATAGATCAATTTAACAA
ATTGATTAAAATCTTCTCCCAATTATTATTAATGAATAATTAATTAAGTG
GACATCAATTACCTAACATCCACTCTTCACCCGCATAGACGGAGAAACGC
AGAGCGGCACGACAGGAACGAGAAATCTTCTTCCTCCTTGACGGGCAGGT
TCGCATTCAAGTGAGAGGGCAAAAAGTGGCCAGGCTGAAGTAAGGGAGAG
AGGGAAGGAGGGAGGGAAGAGGGGGTGCGCAGCAAATTTCACATCATTTA
ATGCAGAATTCCAATTCTTATGCCCACGTACCTCTCCCTCCCTCCCTCCT
TCCCTCTTTTCCTCCCTCCCCCCCCTCCCCAGTCAAGGTGATTTTCTGGG
TGAGGCTTCTTTCGTGACCAACCGCACGGGCCCTCGCTCCGTCACCGCCA
TCTGCTCGTATGTGTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCTTCCCTCGATGATCCTCACGATCATGTTGTACTTGTCGAGCTCGTCTG
TCCTTCTGATACTTACGCCATCCGACTTACTGACCTACCCTCCCTTACTC
CCTCTCTCCCTTCCTTCCTCCCTCCCTCCATCCTTCCCTCGCTCCTTTCC
TCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCCTTTAGGGGAGAGACCGGT
GCTCATTACATAGTCTGGAATCAAGCCAAGCTCCATGCCTTCCTCGAGGG
AGGGAAGCAGGGAGGGAAGGAGGGAGGGGGGAAGGTAGATGCCCATGCCT
CCCTGTCAGGACAAGGTGAGGAGGGCGGAAGGCGAGGAGGGAAGGAAGGA
GCGAAGGAGGGAGGACAGGTGAAAGAGGGAGCTCTACATGCCCTCTGCTT
CCAGGTGCCACTTCGTTTAACTCCATCCCTTTTCCTCCCTCCCTTCCTCC
GTCCCTCCGTCCCTCCCTCCCTCCCTCAGACCACACCCTGAACGAGCTCC
GGAACGCCCTCACTGAGTTGTGGGTTAGACAGCTCAGTAAAAAGCTAGCC
CTTACCATGGCCACCTACGAGCGGTACGCAAGTCTTCTCTCCTTCCCTCC
CTGCCTCCCTCCTCCCTCCTTCCCTCGTATCCAATCCACCCTCCCTTTCG
GCCCGGCCTCCCTTCCCTCCTTTCCTCCCTTTCTCCCTCCCTCCTTCCCT
TCCCTCTTCACCTGCCCTCCCACCTTTCTCTCCTCTTCTCCCTCCCTCCC
TCTCTCCCATCCCATCATATCCGCTCCTTGTAGCCCGTCATTCTGACACT
CATTTCTCCTACGCACTTCCCAACGAGTCCCAAAAGTACCTCTCCAGTTA
ACCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCAGGGGCTGGCAACCCACGGACGAGCTAGAGGCGGACGAGCG
AAAATACGAGGGAGACTTTGGCTTCCGAAACTCCTCGGCCTTTGGCATCT
CCGGTCCGGCCGATGAATTGTCGAAGTAAGGAGGGAGGGAGGGAGGGAGG
GAGGGAGAGAGTTCATGGGAAGTGAGGGAATGGGGTGTATGTCAGGATGA
CGGGCTTGAGCAAATGGACACGATGGGGATGGCATGGAAGGTGGAGGGAA
AGAAGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAAATGTGTTT
GGGCGAGCAACTCCCCTCTCTCACCCTCCCCCCCTTACCTCCCTCCCTCC
CTCCCTTCCAGGGCGATTCCGAGCTCAGCTTTTAAACTTGCCCAATGGAA
TTTTCTGCGGGAGTACCAGGTACGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGACTTATGCTTGACAATTATTTCTTTGG
TGGTGCTCGGTGATTCGCCATTCGATCCGCTCTTGTGAGTGCGCCTGGTG
TCCCCAATCAATTATTTAATTTGATTTTTATTCATTGAATTTAATGATTT
GTCATTTGATTTCGTCATATCCCCCTCACAGGCGATTCGTCGCTCGTTTC
GTTTTTATGAGTACAGCAACGTCTTCCAGGGTCTTCGTAGGTCCGTGGGA
ACCAGCAGGTCAGGCGGGAGGGAGGGAGGGAAGGAGGGAAGGAGGGAAGG
AGGGAGGGAAGGAGGGAGGGAGCAAGAGGGAACACGAATGGTTCGATAAA
AATCATACATGTTCATATGTATCTTAATTGCATTCTTCCTTCGCGTGTTT
CCTTCCTTTTTGGTAATTGTGCTCATTCATACTTTTCTCCTCTCGCAACA
CCCTCAAAAACACTCAGCCCGTATATGGATGCGGTGGCCGTGATTCGCAA
GCTCATCATCGGTGCCTTTGGAGCGATCGATCTGGTAACCCGTCCCTCCC
TCCCTCCCTCCCTTCCTCCCTATCCTTCCTCTTTCTTCCTTCTCTTTCTC
GCTCCTTTTCTTTTTGCATTCCTTCATCCCTCCCTCCCTCCCTCTCTCCC
TCCCTCCCTCCCTCCCTCCCCCAGACCTTGGAATGGTTCGGCATTTTTCC
CACCCTCCGACCGTCTCGAGCGTACATGAGCGAGAACCAGCAGGTGAGAG
GGAAGGGAGGGAGGGAGGGAAGGAGAATGCAACGCTGTCATAGAGCCATA
CCTCTTATCTCTTCCAGGTAAAGATTTCACGGAGCGAGGGAGGGAGGGAG
GGAAAGAGGGAAGGAGGGAGGAAAGGAGGGAGGAGTGATGGGATTGATGT
ACTCATGTGGCGTCTCCTACAGGTCGTGGATTTACAAGCACGGCTCCGTC
TCCTCACCCTCTCCAATGAGGTACGCCCTTCCCTCCCTCCCTCTCTCCCT
CCCTCCTTCCCATTTCCCCTTCCCCCTCCTCTTTTCCCACATTCCTTCCT
TCTTCTCAGCCTTCCTCCTCCCCTCCCTCCTCTCCCCACACTTTCCCTTC
TCACCAGGCCATTAGCAAGCGCGAGGAAACACGGCGAGAGATTCAAATAG
AACTCATCGACCAGGGTACATCCTCCCCCACATCCTCCCTCCCTTCCTCC
CTCCCTCCCTCCCTCCTTTTCTCCCTCCTTCTCACCGTTCCTTAACCTCC
CATGTTTTCTTCATAGTGTTCTCCTCCTCACGCCCGTGTTTCTGACTAAC
ATTTACATCCCTCATCTGCTTCTTAATGCCCTCCTTCCCTCCCCATCACA
AGCCCGGCTCATCAAGCCCATCATTCTGACTGACACCCACACCCCTCATC
TCCCATCCACATCCCGTCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCTTCCCTCCAGCCCAAGCCCAAGGCGTAGGGATGGCGGCTAAGATGA
AACAATCAGGCACCCCGTGGTTCGTCATCCTCCCCTACTACGCCCTATGC
GCCTTCCTCGACATAGTCTATGAAGGCCGCCCACTGGCCCGCTTCTGGTT
TCTGGAGACGGTCGCGCGGTACGCCCCTCTCTTCCTCCCTCCCTCCCTCC
CTCTTTGTCTCCCTCCCTCCCTCGTTGTCTGCCCGCCACGTCTTTCGCCC
CAGTGGGAGGAATGTGACTTTTCACGAAGTCACCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCCTCAGCATGCCCT
ACTTCTCGTACATCAGCATGTTGCACTTATACGAGACGTTGGGATGGTGG
ACCATTGGCACGGACGTCAGGCGCGTGCATTTCGCGGAGGGTAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGA
GATGGGCCAGGGGTATAAAAGGTATTGGAAAGTAGGGCTCGTGGATGTTC
AAATGACGGGCTTGGTGATGTGGTCACATTCAGACGGATGAAAAGAAGGG
AGGGAGGGAAGGGAGAGAGGGAGGGGTTTGGTGCGTGGGTAGCTTACACT
ACCCCTCCTCCCTTTCTCCCTCCTTGCTTCCCTCCTTTCCTTAGAATGGA
ATGAGCTGCACCACCTGCAAATTATGGAGTCGTTGGGAGGGGACGCTCGT
TGGCTCGACCGTTTCTTGGCCCGACATTCAGCAATATGTAAGGAGCGGAG
AGAGGGAGGGAGGAGGGGGAGGAAAGGGAAGGGGGAGGGAGTGGCAGGCA
TGTTCATTTATCACATGCATGTCCAAACACAATCTGACTTTTGCCACTGC
TACTGTTTACCCTAATGTCCCCTTTCTCCCTCCCTTCCTCCCTCCCTCCC
TCCTTCCCTTCCTCCCTCCCTCCAGTGTACTACTGGGTTTTAAACGTCTT
CTTTCTGGTCTCGCCACGCCTTGCCTACAATTTCTCCGAGTTGATTGAGA
GCCACGCCGTGGACACCTACAGTCAATTTTTGGAAGAAAATGAAGAGCTC
TTGAAGAAGCTTCCCGCCCCTCGCGTTGGTGAGGGAAGAGGGCGGGATGG
AGGGCGAGGCACACATGTAGACGTGCGTGTGTATGGACGTGTGTGGTGGG
TGTCGGTGGGTACTAATCCCATCTCCCTCCCTCTCCGCCCCCGCCCCCTA
AACCCACATGCACAGCACTAGATTACTACGTGATGGGCGACCTTTATATG
TTTGATGAGTTCCAAACCTCCCGCCCTGTTCGTTCCCGGTAAGTCCCTGG
CCCCGCCCTCCTCTCTCTTAACACCCTGTCCCCCTTCACGCACCTTTGGA
GGCCGACATGACAAGACAGAAAAGGGCAAATGCAATGCAGCACAACCCTC
ACAGATCGTTGCTTTTTTCCAATTCCTTGTTGCAGGCCACTGTCATTCCT
TCTTTTAGTGATTAAATTCCCTGAATAACATGTTCGGGGGCATCTGGAGA
CGAACGATGAAAGCGAGCAGGCAGAAAGAGCATCCCAAAATGTCTGCCCA
TTTTGTCAATGCCGTAATATTAATTAACACACTCAAATTTGATCGCTTGT
TTATGTGTGTCTCTCTCCCTCACTCTCTCTCTTGCACACATATACACAAA
TGCAGGCGACCGCTGATTCGCTCCCTTTACGACGTCTTCTCCGCGATCCG
GGACGACGAAAGCGAGCATGTCAAAACCATCAATGCGTGTCAAGTCTCGG
AGGAAAAGATTATCTCCCCCAACGCCGCCGCTGCAAATGCCGGTTGGGCG
GAACAGGTAGAGGAGGAGGACGAAGAGAAAATGGAAAGACGGCTCAGAGA
GGATTGGGTCAGGGAGTACGACGCTCTAGGAGTGGGAAGGCCCTGGGATG
GAGGGGAGGAGGTAGGAGCGGAAGAAGGTGAAGAGGGGGAAGACCATGAC
GGGTTGGGGTGGAGCGAGGAAGTGGAGTTTCCTTAAGTATCGCACATTGG
CCGATAACAAAAAGAAATGCATTTTTTTTTTGGTCGCGCGCATGGATTTG
ACTCCACGTTGCCAAAAGCAATTACTGAATAGCTGTGATTGC

Coding sequence (CDS) from alignment at chr30:307804..314895+

>NO30G00860.3 ID=NO30G00860.3|Name=NO30G00860.3|organism=Nannochloropsis oceanica|type=CDS|length=2136bp|location=Sequence derived from alignment at chr30:307804..314895+ (Nannochloropsis oceanica)
ATGACACGCAGCGGCAGCTGCAGGAGCAGGAGCATGGACAGCAGTGTCAG
AATCAGAGGCCCACGACCACTCCATCGAAAAAGATATTTGCCCTCAAGTC
CCCGCAGTGTGCATGGCAGGTCTCTCATCCGTCTTTTTTTCCATTGCCTT
GTGCTGGCCCACATCGTCGTTGATGCCTTCATTCCTCCGTACCCCGTCGC
CTGCCCTTCCCTTCCTGTCTCGTCAACCTTTCTCAGCATTACCCAGCGGC
AGCGGCAGCAGTTCAATACATACAGCAGCAGTATCAGCAAAAGCCTAGGC
CAGGGAGGATCAACAAGCGACAGGCGATGCTTGCTCCGACACACCGCCGC
GAGCCGTTTTGCAACGGTTAGCATCCCTCCCAACAAGAAAAAACCAGCAA
CCCCTCCCCTTCGGACTATGTCCCGTGAAGCCGCCCTTGAGAAGTGGAGG
ACGTTTGTGAATGACAATCTTAATGACGCCGGCCAGAACGTGAGGGTCTC
GGTGAGGCTGGCTGATGCGATGTTCGACTGCGGTTCTGTGCAGTCAGGAA
AAGCCGGCACATTTCTCATCGAGGAAGGGTCAGACGAAGAAGACCAGGCG
GAAAAAACGGAGAAACGCAGAGCGGCACGACAGGAACGAGAAATCTTCTT
CCTCCTTGACGGGCAGGTTCGCATTCAAGTGAGAGGGCAAAAAGTGGCCA
GGCTGAATCAAGGTGATTTTCTGGGTGAGGCTTCTTTCGTGACCAACCGC
ACGGGCCCTCGCTCCGTCACCGCCATCTGCTCGGGAGAGACCGGTGCTCA
TTACATAGTCTGGAATCAAGCCAAGCTCCATGCCTTCCTCGAGGGAGGGA
AGCAGGGAGGGAAGGAGGGAGGGGGGAAGGTAGATGCCCATGCCTCCCTG
TCAGGACAAGACCACACCCTGAACGAGCTCCGGAACGCCCTCACTGAGTT
GTGGGTTAGACAGCTCAGTAAAAAGCTAGCCCTTACCATGGCCACCTACG
AGCGGGGCTGGCAACCCACGGACGAGCTAGAGGCGGACGAGCGAAAATAC
GAGGGAGACTTTGGCTTCCGAAACTCCTCGGCCTTTGGCATCTCCGGTCC
GGCCGATGAATTGTCGAAGGCGATTCCGAGCTCAGCTTTTAAACTTGCCC
AATGGAATTTTCTGCGGGAGTACCAGGCGATTCGTCGCTCGTTTCGTTTT
TATGAGTACAGCAACGTCTTCCAGGGTCTTCGTAGGTCCGTGGGAACCAG
CAGCCCGTATATGGATGCGGTGGCCGTGATTCGCAAGCTCATCATCGGTG
CCTTTGGAGCGATCGATCTGACCTTGGAATGGTTCGGCATTTTTCCCACC
CTCCGACCGTCTCGAGCGTACATGAGCGAGAACCAGCAGGTCGTGGATTT
ACAAGCACGGCTCCGTCTCCTCACCCTCTCCAATGAGGCCATTAGCAAGC
GCGAGGAAACACGGCGAGAGATTCAAATAGAACTCATCGACCAGGCCCAA
GCCCAAGGCGTAGGGATGGCGGCTAAGATGAAACAATCAGGCACCCCGTG
GTTCGTCATCCTCCCCTACTACGCCCTATGCGCCTTCCTCGACATAGTCT
ATGAAGGCCGCCCACTGGCCCGCTTCTGGTTTCTGGAGACGGTCGCGCGC
ATGCCCTACTTCTCGTACATCAGCATGTTGCACTTATACGAGACGTTGGG
ATGGTGGACCATTGGCACGGACGTCAGGCGCGTGCATTTCGCGGAGGAAT
GGAATGAGCTGCACCACCTGCAAATTATGGAGTCGTTGGGAGGGGACGCT
CGTTGGCTCGACCGTTTCTTGGCCCGACATTCAGCAATATTGTACTACTG
GGTTTTAAACGTCTTCTTTCTGGTCTCGCCACGCCTTGCCTACAATTTCT
CCGAGTTGATTGAGAGCCACGCCGTGGACACCTACAGTCAATTTTTGGAA
GAAAATGAAGAGCTCTTGAAGAAGCTTCCCGCCCCTCGCGTTGGTGAGGG
AAGAGGGCGGGATGGAGGGCGAGGCACACATGTAGACGTGCGTGTGTATG
GACGTGTGTGGTGGGTGTCGGTGGGTACTAATCCCATCTCCCTCCCTCTC
CGCCCCCGCCCCCTAAACCCACATGCACAGCACTAG

Synonyms

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