NO30G00740.1, NO30G00740.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO30G00740.1
Unique Name	NO30G00740.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2624
Alignment location	chr30:268271..272667 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr30	genome	chr30:268271..272667 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO30G00740.1 vs.
Match: XP_005652310.1 (hypothetical protein COCSUDRAFT_45983 [Coccomyxa subellipsoidea C-169]; EIE27766.1 hypothetical protein COCSUDRAFT_45983 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 221.5 bits (563), Expect = 9.100e-54
Identity = 197/654 (30.12%), Postives = 319/654 (48.78%), Query Frame = 0

Query:   62 TASVSAYKAPVPFLIESLAWQDLSYYYRTQDGGKDIEKAAVKNATGLVRRGDMVAVMGPSGAGKSSLFDVLARRIGSSGRLEGQMYVNGSALDDDTFQRISEYVQHEDVFVPTQTLENALLYHCNLRLGPTVPLGEKRAKVEGLAHEAGLSDKMHTRIGGLLAGGLTVKGLSNGEKRRASVVCAALASPSILFLDEPTSGLDSYAALKVMEMMSKFCAEGRLIVCTIHQPRSQVYDLFNKVLVLSQGNTIYFGDSSTAGVLRWFEGTL--QRSLPLGTSIPDFVLDLVNISFLEDEDGKEGGMERGEEEGKKPKNGLASTGEQHGLSSSEKSIKRKENKKEKKQEGMTQHKQHKQQQ-------QQGPLQIIKA--AALFRHSPSSMALREEINEIHARALSIEKDHRHKHHGEDERTDRHVLTTKEKIIAATHRGESSWAYRFQVVFKRNLQFYLANPGNVLVRLFISFTVGIFQGIVFFNSPSKTPALVQAVALLICLFVTQLQALLLPFVSMTLFIEDRKFFVREAASRLYSTSIYFLANALLELILTTACALIYGLLTYFLCFYATSGDFAFSWARLSVYLLFVVAGAHTGSMQAIMCAILSPSLELACTLNVG-ITCVFCFGGIPPRLLFPPARIIQWISPLKYSYTAM 704
            TAS  A + P       LAW D++ +   Q   K  +K  +  ++G    G+ VA++GPSGAGKS+L D+L+ R  SSG+L+GQ+ +NG  L    F+R S YV  ED FVPT +    L +   L L   +   ++R                   +GG L GG+ V+GLS GEKRR ++ CA +++PSILFLDEPT+GLDS+AAL VME MS     G  I+ +IHQPRS ++D+F+K +VLS+G+ +YFG    A  L WF   L    S     ++ D+++DLV++ F              ++        + S G+    + +    +++E   E+ ++G++      +         +QG  ++  A  A +   + SSM           +A SI      +  G+ +         K+++  A+ +  +SW  +F+++  R +   L NP +   RLF+S  VG   G+ F++ PS   ++ + +AL   LF   L   LLPF  M+ ++ DR+FF  + ++ LY  S Y+L++     ++ +   +I   L   LC Y  +G       RLS +              A+ C  L+P+ +LA  L  G +       G   R+      +++ +S L Y+  AM
Sbjct:  116 TASHLAVQYPA-----DLAWFDVTCHVLDQKTLK--QKQVLHPSSGNAYPGECVALLGPSGAGKSTLLDILSLR-KSSGKLKGQVMMNGRPLGVQ-FKRNSAYVAQEDCFVPTMSAWETLKFTATLTLPKAISPEDRR-------------------VGGALPGGILVRGLSGGEKRRLNIACALISAPSILFLDEPTTGLDSFAALNVMEHMSNLADLGHTIIASIHQPRSAIWDMFDKCVVLSEGHNLYFGSPKRA--LDWFSDALGYSYSYQRDGAVSDWLMDLVSVGF--------------QKPASYHSRSMCSVGDVQRAAVAFAKERKEERADERAEKGLSGRSSPTKPSTPRGGIGRQGSAKVAPATTAPVVGRTRSSM----------GKAGSIASLEDLEAVGKAQ--------VKKQMEWASGKYAASWWTQFRILLNRAMLGQLRNPTDTTSRLFLSTWVGCLAGLAFYDLPSGPDSVTRRLAL---LFFILLLFELLPFCYMSFYVADRRFFAADISNDLYHPSAYYLSS-----VIASIPFVIINSLCGCLCAYGLAG------LRLSAH--------------AVFCVWLTPNQDLAYVLATGYVAASILLSGFYLRIDDMKLAVMRGLSYLSYTKYAM 679

The following BLAST results are available for this feature:

BLAST of NO30G00740.1 vs.

BLAST of NO30G00740.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005652310.1	9.100e-54	30.12	hypothetical protein COCSUDRAFT_45983 [Coccomyxa s...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO30G00740	NO30G00740	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00740.1	NO30G00740.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00740.1.cds1	NO30G00740.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds2	NO30G00740.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds3	NO30G00740.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds4	NO30G00740.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds5	NO30G00740.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds6	NO30G00740.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds7	NO30G00740.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds8	NO30G00740.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds9	NO30G00740.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds10	NO30G00740.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds11	NO30G00740.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00740.1.cds12	NO30G00740.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr30:268271..272667+
coding sequence from alignment at chr30:268271..272667+

mRNA sequence

>NO30G00740.1 ID=NO30G00740.1|Name=NO30G00740.1|organism=Nannochloropsis oceanica|type=mRNA|length=2624bp
TGATTCGCTTCCCAACGTCCGTCATTCTTCGCGATGCATTGCTGCTTGCC
TTCTAACACACACATGTCCTTCTTTTTCGCACACGCCCCAAACAAACATA
CGTAAATTACCAAAAAGCTAACCCTGTCATCAGAGCTCACTGCCATCCAT
CTATCAGCCTTACAACAATGGCTGCCCGAATGCTGGCCAAGTGGTCCTCC
AAAGCCGAAGGGCAGGCGACAACAGCGAGTCCGACCCCTAAGCAGGAAGT
ATCCTCACCGGTCCTAAGTAATTTGGAGGGACAAAGCAATGCTCTCAGCC
CTGGCATCACGAACGCTACTGCCAGCAAAGGGGCAGGGAAGCTGACGATG
ACGGCCTCTGTATCAGCATACAAAGCACCCGTCCCCTTTCTCATTGAGAG
CTTAGCTTGGCAAGACTTGTCGTACTACTACCGCACCCAAGACGGAGGAA
AGGACATAGAGAAGGCTGCGGTCAAGAATGCGACGGGCCTGGTGAGACGT
GGGGATATGGTGGCCGTCATGGGCCCGAGTGGTGCAGGGAAATCGTCTCT
CTTTGACGTGTTGGCTCGACGAATTGGGAGCTCAGGACGGTTGGAAGGGC
AGATGTACGTAAATGGCTCAGCCCTGGACGACGACACGTTTCAACGTATC
TCCGAATACGTGCAGCATGAAGATGTCTTTGTTCCCACCCAGACACTGGA
GAATGCCCTTTTATACCATTGCAACCTCCGCCTGGGTCCCACCGTCCCTC
TTGGAGAGAAACGGGCCAAGGTCGAGGGCCTGGCCCACGAGGCGGGCTTG
AGCGACAAAATGCACACTAGAATCGGTGGCCTTCTAGCTGGTGGCTTGAC
GGTCAAGGGACTCAGCAATGGAGAGAAGCGAAGGGCATCTGTAGTGTGTG
CCGCCCTTGCCTCTCCTTCAATCTTGTTTCTAGACGAACCAACCAGCGGT
CTGGACTCTTATGCAGCTTTGAAGGTCATGGAGATGATGTCCAAATTCTG
TGCGGAAGGCCGTCTGATAGTCTGCACCATTCACCAACCGCGCTCGCAAG
TGTACGATCTCTTCAACAAGGTTTTAGTCTTGTCTCAAGGGAACACTATT
TATTTCGGCGACAGCTCTACTGCGGGTGTGCTACGCTGGTTTGAGGGTAC
ACTCCAGCGGTCCCTCCCCCTTGGCACCTCCATCCCTGACTTCGTCTTAG
ACTTGGTCAACATCTCCTTCCTGGAGGACGAGGACGGGAAAGAGGGAGGG
ATGGAGCGAGGGGAGGAGGAAGGGAAGAAGCCTAAAAATGGGTTGGCATC
GACGGGGGAACAGCACGGATTATCGTCTTCGGAGAAGAGCATCAAAAGAA
AGGAAAACAAAAAAGAAAAGAAACAGGAAGGGATGACGCAACACAAGCAG
CACAAGCAACAGCAGCAGCAGGGGCCGTTGCAAATTATAAAGGCTGCAGC
GCTCTTTCGTCATTCTCCTTCCTCCATGGCATTGCGCGAGGAGATAAATG
AAATCCATGCTCGGGCTTTGTCAATAGAGAAAGATCATCGTCACAAGCAC
CATGGAGAAGATGAACGCACTGATAGGCATGTTTTGACGACGAAGGAAAA
AATTATAGCAGCTACGCACAGGGGGGAGAGTAGTTGGGCGTATCGGTTTC
AGGTGGTGTTCAAGAGGAATCTCCAATTTTATCTCGCTAACCCCGGGAAC
GTCCTCGTCCGTTTGTTCATCTCTTTTACCGTGGGCATCTTCCAAGGCAT
CGTGTTCTTTAATTCGCCGTCCAAGACCCCCGCACTCGTGCAAGCAGTCG
CATTACTTATCTGTCTCTTTGTCACGCAGCTACAAGCGCTACTGCTACCA
TTTGTAAGCATGACTTTGTTCATCGAAGACCGCAAATTTTTCGTCCGCGA
GGCTGCCTCTCGTCTATATTCGACTAGCATTTACTTTCTCGCCAACGCCT
TACTAGAGCTGATCCTCACCACTGCCTGTGCGCTAATCTATGGACTTCTA
ACCTACTTCTTGTGCTTTTATGCAACAAGTGGAGATTTCGCGTTTAGTTG
GGCCAGATTATCCGTCTACCTCCTTTTCGTTGTCGCGGGCGCTCACACCG
GTTCCATGCAAGCTATTATGTGCGCCATCCTTTCTCCTTCTCTAGAGCTT
GCCTGCACGCTCAATGTCGGTATCACTTGCGTGTTTTGTTTTGGTGGCAT
CCCCCCTCGACTGCTCTTTCCTCCTGCCAGGATTATTCAGTGGATCTCCC
CCTTGAAATATAGCTACACTGCCATGGTCGAATCCTATTTCCGCGGCACC
TCCGCCAACTTCTACGTGGAGATGATGGACGTCACACGACCAAGCGGTGT
GTGGGTCAACTTTGGTTGCCTCCTTGTCTTCTTTATAGTCTACAATGTAA
TTTCTTTCTGGGGACTGCATAATTTGTATCGTACGAAACGCTAGACTGCT
TTTGGTATGCGTCATCTGCATAAAACGCACGTGTGACACACAGTGCGCAG
AGCAAAGTTAAACAAAAAAATGTCGGCAGTGATACACGTGGGTAAAAGAA
AGCATAATTATGCACACCGAAAAAGCACTTTAGGGGAAAAAAAGGATGGA
TGAGACTTTTAAGCAATAGATATT

protein sequence of NO30G00740.1

>NO30G00740.1-protein ID=NO30G00740.1-protein|Name=NO30G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=759bp
MAARMLAKWSSKAEGQATTASPTPKQEVSSPVLSNLEGQSNALSPGITNA
TASKGAGKLTMTASVSAYKAPVPFLIESLAWQDLSYYYRTQDGGKDIEKA
AVKNATGLVRRGDMVAVMGPSGAGKSSLFDVLARRIGSSGRLEGQMYVNG
SALDDDTFQRISEYVQHEDVFVPTQTLENALLYHCNLRLGPTVPLGEKRA
KVEGLAHEAGLSDKMHTRIGGLLAGGLTVKGLSNGEKRRASVVCAALASP
SILFLDEPTSGLDSYAALKVMEMMSKFCAEGRLIVCTIHQPRSQVYDLFN
KVLVLSQGNTIYFGDSSTAGVLRWFEGTLQRSLPLGTSIPDFVLDLVNIS
FLEDEDGKEGGMERGEEEGKKPKNGLASTGEQHGLSSSEKSIKRKENKKE
KKQEGMTQHKQHKQQQQQGPLQIIKAAALFRHSPSSMALREEINEIHARA
LSIEKDHRHKHHGEDERTDRHVLTTKEKIIAATHRGESSWAYRFQVVFKR
NLQFYLANPGNVLVRLFISFTVGIFQGIVFFNSPSKTPALVQAVALLICL
FVTQLQALLLPFVSMTLFIEDRKFFVREAASRLYSTSIYFLANALLELIL
TTACALIYGLLTYFLCFYATSGDFAFSWARLSVYLLFVVAGAHTGSMQAI
MCAILSPSLELACTLNVGITCVFCFGGIPPRLLFPPARIIQWISPLKYSY
TAMVESYFRGTSANFYVEMMDVTRPSGVWVNFGCLLVFFIVYNVISFWGL
HNLYRTKR*

mRNA from alignment at chr30:268271..272667+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO30G00740.1 ID=NO30G00740.1|Name=NO30G00740.1|organism=Nannochloropsis oceanica|type=mRNA|length=4397bp|location=Sequence derived from alignment at chr30:268271..272667+ (Nannochloropsis oceanica)
TGATTCGCTTCCCAACGTCCGTCATTCTTCGCGATGCATTGCTGCTTGCC
TTCTAACACACACATGTCCTTCTTTTTCGCACACGCCCCAAACAAACATA
CGTAAATTACCAAAAAGCTAACCCTGTCATCAGAGCTCACTGCCATCCAT
CTATCAGCCTTACAACAATGGCTGCCCGAATGCTGGCCAAGTGGTCCTCC
AAAGCCGAAGGGCAGGCGACAACAGCGAGTCCGACCCCTAAGCAGGAAGT
ATCCTCACCGGTCCTAAGTAATTTGGAGGGACAAAGCAATGCTCTCAGCC
CTGGCATCACGAACGCTACTGCCAGCAAAGGGGCAGGGAAGCTGACGATG
ACGGCCTCTGTATCAGCATACAAAGCACCCGTCCCCTTTCTCATTGAGAG
CTTAGCTTGGCAAGACTTGTCGTACTACTACCGCACCCAAGACGGAGGAA
AGGACATAGAGAAGGCTGCGGTCAAGAATGCGACGGGCCTGGTGAGACGT
GGGGATATGGTGGCCGTCATGGGTACGTAGGGAGGGCAAGGAAGGGTAAG
AAAATAAAGGAAGGACTACAGATTGGCGTCAAGATTCCTCTCTCTTTCAT
CTAAGAATGCTCTCTCTCTACGTATATCTATTTTCTCTTTAGGCCCGAGT
GGTGCAGGGAAATCGTCTCTCTTTGACGTGTTGGCTCGACGAATTGGGAG
CTCAGGACGGTTGGAAGGGCAGGTGAGAAATTAAAGGAGGAAGGCTTAAT
TAACCATGGGCCGCATTGATCCCACGGTAAATCAACTCAACTGAATAGGA
AAAGGAAGTGAAGAGGAATAGAGAGGGAAGGAAAGAAGAGCAGATGATGT
TCTCGATTAATACGCGACCATATATATTACATCTACCCACTCATAACTCC
CACGTGTCTCAGATGTACGTAAATGGCTCAGCCCTGGACGACGACACGTT
TCAACGTATCTCCGAATACGTGCAGCATGAAGATGTCTTTGTTCCCACCC
AGACACTGGAGAATGCCCTTTTATACCATTGCAACCTCCGCCTGGGTCCC
ACCGTCCCTCTTGGAGAGAAACGGGCCAAGGTCGAGGGCCTGGCCCACGA
GGCGGGCTTGAGCGACAAAATGCACACTAGGTAATAAGCTTCCAATTTCT
CTCGTCGCTCTTTCTTTTCTTTCACTACCGTCGAACACTGCGATTCGCCC
CCTCTCGCTCTCGCTCTCTCTTGTTCTTCCTACTTCCCTCTCTCCTCTTC
TTCCTCCTTCCCATACCATCTCGTCCATCCATCCCCGTCTTTCGACCTCT
TTTCCGTCGTGGCTCATGTGACAACCTTGCTGAGCCCGTCTGCAGGACAT
CCACGCGTCACAGCTTCATCAAAGTTTAATGCTTCCTCCATTTAGATTGA
CCTCCCTCCCTCCCTCTTTGCCCTAAGAATCGGTGGCCTTCTAGCTGGTG
GCTTGACGGTCAAGGGACTCAGCAATGGAGAGAAGCGAAGGGCATCTGTA
GTGTGTGCCGCCCTTGCCTCTCCTTCAATCTTGTTTCTAGACGAACCAAC
CAGGCAAGCTCTCCCATGGTTCCTTCTTCCTTTCTTTCCTCCTTTCCTTT
TTTTGTGCCCCTCACCTCCCTCCCTCCCTCCCTCTTCTCAGTGCGCTTAT
TTCCTCACTTATCACGCTCCCTTTCTCTACATCATCCTCTTTCTTGTCCC
CCTGCCTTTTTGTCAGCGGTCTGGACTCTTATGCAGCTTTGAAGGTGGGT
AAAGAGGAAGTACAAGGGAGGGGAAGAGGGAGGGAAGGAAGAGGGCCTTT
GAAAATGCACATATTTATTTCTGAATGCCCCTCCTTCCCTTCCCCCACCC
TTTCTCCCCTCCTTCCCTCACTCCCTCTGCCCGTCAATCCTTCCTTCCAG
GTCATGGAGATGATGTCCAAATTCTGTGCGGAAGGCCGTCTGATAGTCTG
CACCATTCACCAAGTACGGCGGAAGGGAGAAAGGGAGGAAGGGGGGGAGG
GAGGAAGAAAATCGAGGAAGGGAAAGCTCAACTTGGTCTGATTGTACTGT
CAAGCCTCTTTAAAAATCTCGTTTCACAATCCATTCCTCTTTCCCTCCCT
CCTTCAAAAAGCCGCGCTCGCAAGTGTACGATCTCTTCAACAAGGTTTTA
GTCTTGTCTCAAGGGAACACTATTTATTTCGGCGACAGCTCTACTGCGGG
TGTGCTACGCTGGTTTGAGGGTACACTCCAGCGGTCCCTCCCCCTTGGCA
CCTCCATCCCTGACTTCGTCTTAGACTTGGTCAACATCTCCTTCCTGGAG
GACGAGGACGGGAAAGAGGGAGGGATGGAGCGAGGGGAGGAGGAAGGGAA
GAAGCCTAAAAATGGGTTGGCATCGACGGGGGAACAGCACGGATTATCGT
CTTCGGGTACGTCTGCCTCCTCCGCTTCGAATTCTCTCCCCCCCCCCTCC
TCGTCTTCCTTCTCATCCTTCTCCTGTTCCCCCTCTCGGATTGAAGAGAA
GAGCATCAAAAGAAAGGAAAACAAAAAAGAAAAGAAACAGGAAGGGATGA
CGCAACACAAGCAGCACAAGCAACAGCAGCAGCAGGGGCCGTTGCAAATT
ATAAAGGCTGCAGCGCTCTTTCGTCATTCTCCTTCCTCCATGGCATTGCG
CGAGGAGATAAATGAAATCCATGCTCGGGCTTTGTCAATAGAGAAAGATC
ATCGTCACAAGCACCATGGAGAAGATGAACGCACTGATAGGCATGTTTTG
ACGACGAAGGAAAAAATTATAGCAGCTACGCACAGGGGGGAGAGTAGTTG
GGCGTATCGGTTTCAGGTAGGTAGGTTGAGAGTGAGGGAAGGAAGGAGGG
AGGGAGGGAGGGAGAGTAGGACGGTGGAAGGGGCCAAGAGCTTTTTCAAA
TCCTTCATTTGAGGACTTTGCCTCACTCAAGTCTCTATGCCAACGTCCCA
CTGTTACTCAGGTGGTGTTCAAGAGGAATCTCCAATTTTATCTCGCTAAC
CCCGGGAACGTCCTCGTCCGTTTGTTCATCTCTTTTACCGTGGGCATCTT
CCAAGGCATCGTGTTCTTTAATTCGCCGTCCAAGACCCCCGCACTCGTGC
AAGCAGTCGCATTACTTATCTGTCTCTTTGTCACGCAGCTACAAGCGCTA
CTGCTACCATTTGTAAGCATGACTTTGTTCATCGAAGACCGCAAATTTTT
CGTCCGCGAGGCTGCCTCTCGTCTATATTCGACTAGGTGTGTAACTTTAT
GTATTTTATCTTATATCGCTCCCCTTCCAGGACAATCCTGCGTGTTTGGA
TAGATTCTCAGGATCTGTTTATATCTTCTTGACTTGGCAGTGAAGTCTCT
TCGCATTCTTCGCTAATCACCATCGTGAGGTTTGTGTCTTTCTCTGTCTA
TCGCAGCTCACCTGAGCAACCTCCCCGTGTTCTCCATCTCGTCCTTTATC
ACGTAATATTACTTTCGACAGCATTTACTTTCTCGCCAACGCCTTACTAG
AGCTGATCCTCACCACTGCCTGTGCGCTAATCTATGGACTTCTAACCTAC
TTCTTGTGCTTTTATGCAACAAGTGGAGATTTCGCGTTTAGTTGGGGTAC
GTACCGTTTTCCTGCGTGATTAGGGAGAAGTCGAAGGGGAAGACTAAAGG
GGGGCTTCATACAAGATAAATACTGACTTATTTACTGACTTTCAATTGCT
TTGTTATTATGACAACACAGCCAGATTATCCGTCTACCTCCTTTTCGTTG
TCGCGGGCGCTCACACCGGTTCCATGCAAGCTATTATGTGCGCCATCCTT
TCTCCTTCTCTAGAGCTTGCCTGCACGCTCAATGTCGGTATCACTTGCGT
GTTTTGTTTTGGTGGCATCCCCCCTCGACTGCTCTTTCCTCCTGCCAGGA
TTATTCAGGTACGTATTTATGCATGTTCGTGATTCTCCCTCATTCCCTCT
CTCCTCCCTTCCCCTCACAGATACACAAAATTTACTTATCTGCTCCTTAA
ATCCCTGCAATAGTGGATCTCCCCCTTGAAATATAGCTACACTGCCATGG
TCGAATCCTATTTCCGCGGCACCTCCGCCAACTTCTACGTGGAGATGATG
GACGTCACACGACCAAGCGGTGTGTGGGTCAACTTTGGTTGCCTCCTTGT
CTTCTTTATAGTCTACAATGTAATTTCTTTCTGGGGACTGCATAATTTGT
ATCGTACGAAACGCTAGACTGCTTTTGGTATGCGTCATCTGCATAAAACG
CACGTGTGACACACAGTGCGCAGAGCAAAGTTAAACAAAAAAATGTCGGC
AGTGATACACGTGGGTAAAAGAAAGCATAATTATGCACACCGAAAAAGCA
CTTTAGGGGAAAAAAAGGATGGATGAGACTTTTAAGCAATAGATATT

Coding sequence (CDS) from alignment at chr30:268271..272667+

>NO30G00740.1 ID=NO30G00740.1|Name=NO30G00740.1|organism=Nannochloropsis oceanica|type=CDS|length=2277bp|location=Sequence derived from alignment at chr30:268271..272667+ (Nannochloropsis oceanica)
ATGGCTGCCCGAATGCTGGCCAAGTGGTCCTCCAAAGCCGAAGGGCAGGC
GACAACAGCGAGTCCGACCCCTAAGCAGGAAGTATCCTCACCGGTCCTAA
GTAATTTGGAGGGACAAAGCAATGCTCTCAGCCCTGGCATCACGAACGCT
ACTGCCAGCAAAGGGGCAGGGAAGCTGACGATGACGGCCTCTGTATCAGC
ATACAAAGCACCCGTCCCCTTTCTCATTGAGAGCTTAGCTTGGCAAGACT
TGTCGTACTACTACCGCACCCAAGACGGAGGAAAGGACATAGAGAAGGCT
GCGGTCAAGAATGCGACGGGCCTGGTGAGACGTGGGGATATGGTGGCCGT
CATGGGCCCGAGTGGTGCAGGGAAATCGTCTCTCTTTGACGTGTTGGCTC
GACGAATTGGGAGCTCAGGACGGTTGGAAGGGCAGATGTACGTAAATGGC
TCAGCCCTGGACGACGACACGTTTCAACGTATCTCCGAATACGTGCAGCA
TGAAGATGTCTTTGTTCCCACCCAGACACTGGAGAATGCCCTTTTATACC
ATTGCAACCTCCGCCTGGGTCCCACCGTCCCTCTTGGAGAGAAACGGGCC
AAGGTCGAGGGCCTGGCCCACGAGGCGGGCTTGAGCGACAAAATGCACAC
TAGAATCGGTGGCCTTCTAGCTGGTGGCTTGACGGTCAAGGGACTCAGCA
ATGGAGAGAAGCGAAGGGCATCTGTAGTGTGTGCCGCCCTTGCCTCTCCT
TCAATCTTGTTTCTAGACGAACCAACCAGCGGTCTGGACTCTTATGCAGC
TTTGAAGGTCATGGAGATGATGTCCAAATTCTGTGCGGAAGGCCGTCTGA
TAGTCTGCACCATTCACCAACCGCGCTCGCAAGTGTACGATCTCTTCAAC
AAGGTTTTAGTCTTGTCTCAAGGGAACACTATTTATTTCGGCGACAGCTC
TACTGCGGGTGTGCTACGCTGGTTTGAGGGTACACTCCAGCGGTCCCTCC
CCCTTGGCACCTCCATCCCTGACTTCGTCTTAGACTTGGTCAACATCTCC
TTCCTGGAGGACGAGGACGGGAAAGAGGGAGGGATGGAGCGAGGGGAGGA
GGAAGGGAAGAAGCCTAAAAATGGGTTGGCATCGACGGGGGAACAGCACG
GATTATCGTCTTCGGAGAAGAGCATCAAAAGAAAGGAAAACAAAAAAGAA
AAGAAACAGGAAGGGATGACGCAACACAAGCAGCACAAGCAACAGCAGCA
GCAGGGGCCGTTGCAAATTATAAAGGCTGCAGCGCTCTTTCGTCATTCTC
CTTCCTCCATGGCATTGCGCGAGGAGATAAATGAAATCCATGCTCGGGCT
TTGTCAATAGAGAAAGATCATCGTCACAAGCACCATGGAGAAGATGAACG
CACTGATAGGCATGTTTTGACGACGAAGGAAAAAATTATAGCAGCTACGC
ACAGGGGGGAGAGTAGTTGGGCGTATCGGTTTCAGGTGGTGTTCAAGAGG
AATCTCCAATTTTATCTCGCTAACCCCGGGAACGTCCTCGTCCGTTTGTT
CATCTCTTTTACCGTGGGCATCTTCCAAGGCATCGTGTTCTTTAATTCGC
CGTCCAAGACCCCCGCACTCGTGCAAGCAGTCGCATTACTTATCTGTCTC
TTTGTCACGCAGCTACAAGCGCTACTGCTACCATTTGTAAGCATGACTTT
GTTCATCGAAGACCGCAAATTTTTCGTCCGCGAGGCTGCCTCTCGTCTAT
ATTCGACTAGCATTTACTTTCTCGCCAACGCCTTACTAGAGCTGATCCTC
ACCACTGCCTGTGCGCTAATCTATGGACTTCTAACCTACTTCTTGTGCTT
TTATGCAACAAGTGGAGATTTCGCGTTTAGTTGGGCCAGATTATCCGTCT
ACCTCCTTTTCGTTGTCGCGGGCGCTCACACCGGTTCCATGCAAGCTATT
ATGTGCGCCATCCTTTCTCCTTCTCTAGAGCTTGCCTGCACGCTCAATGT
CGGTATCACTTGCGTGTTTTGTTTTGGTGGCATCCCCCCTCGACTGCTCT
TTCCTCCTGCCAGGATTATTCAGTGGATCTCCCCCTTGAAATATAGCTAC
ACTGCCATGGTCGAATCCTATTTCCGCGGCACCTCCGCCAACTTCTACGT
GGAGATGATGGACGTCACACGACCAAGCGGTGTGTGGGTCAACTTTGGTT
GCCTCCTTGTCTTCTTTATAGTCTACAATGTAATTTCTTTCTGGGGACTG
CATAATTTGTATCGTACGAAACGCTAG

Synonyms

Publications