NO30G00680.1, NO30G00680.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO30G00680.1
Unique NameNO30G00680.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length835
Alignment locationchr30:251959..252793 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:251959..252793 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00680.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G00680NO30G00680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO30G00680.1NO30G00680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO30G00680.1.cds1NO30G00680.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO30G00680.1 ID=NO30G00680.1|Name=NO30G00680.1|organism=Nannochloropsis oceanica|type=mRNA|length=835bp
ggggggggtgctggtggggacgtatggagcaggagagtgcttcggagaga
tggccttgatcaaggcagggaaagaaggaggacgaggaagggagggagga
aggacaccaggtttgattgctgcgagcaatccacccctctcccgaagcaa
ttccgcctcctccgcctcctccctccctTCCTCCTCCTCCTCCTCCTCCT
TCTCTTCCTCCTCCGTCTCTTCCTCCTCCTGCTCCCTCCTCATCACCCCG
ATTTCCTCCTCCTCCTCTTCTTCCTCTTCTCCCTCGTCCTCCCTCCCTTC
ACCATCGCTCTTCGCCCTTGATAGCACCGCATTTCGCGCCCTTTTCTACG
GGAGTCTGGGCCAAGGCTGTCTCCAGACCCTTCGACAGATCCCGCTGTTC
CAGCGCCTCTCCATCTCCGACCTGACCCTCATTGCCATGGCTCTCGGAAA
GCACGGGAGCAGCTCCTTCAAGAAGGGCGAGCTCATCGAGCCCATGGGGC
AGATGGGGTCCGGGGGAGGGAGGGAGGGCGGGCGGGTGGGTACTGCGCAA
GTAGGGGGCGGGTTTTTGATGGTGAGGCAAGGAGTGGTGGAGGTGAGGAG
GAGGGAGGATAACAGCAAGGTGGGGAGGAGAATGAAGGTGTTGGACTATG
TCTTGGAAGGGTGCTTGGCGAGGGGAGGGGGAGAGAGGCAGGGAGGGAGG
GGGGGGGGAGGGGGGCAATTGTTGCCGGGTCGACGCCCTGTGTGGTGCTG
CGGGTCCGAGTGTCGGGAGGAGGAGAAGGGGGAGGGAGGGAAGGGGGAGG
AGGGGATGGGCAAGGAGCAGTGGTTGCTGAAATAG
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protein sequence of NO30G00680.1

>NO30G00680.1-protein ID=NO30G00680.1-protein|Name=NO30G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bp
MALIKAGKEGGRGREGGRTPGLIAASNPPLSRSNSASSASSLPSSSSSSS
FSSSSVSSSSCSLLITPISSSSSSSSSPSSSLPSPSLFALDSTAFRALFY
GSLGQGCLQTLRQIPLFQRLSISDLTLIAMALGKHGSSSFKKGELIEPMG
QMGSGGGREGGRVGTAQVGGGFLMVRQGVVEVRRREDNSKVGRRMKVLDY
VLEGCLARGGGERQGGRGGGGGQLLPGRRPVWCCGSECREEEKGEGGKGE
EGMGKEQWLLK*
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mRNA from alignment at chr30:251959..252793+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO30G00680.1 ID=NO30G00680.1|Name=NO30G00680.1|organism=Nannochloropsis oceanica|type=mRNA|length=835bp|location=Sequence derived from alignment at chr30:251959..252793+ (Nannochloropsis oceanica)
ggggggggtgctggtggggacgtatggagcaggagagtgcttcggagaga
tggccttgatcaaggcagggaaagaaggaggacgaggaagggagggagga
aggacaccaggtttgattgctgcgagcaatccacccctctcccgaagcaa
ttccgcctcctccgcctcctccctccctTCCTCCTCCTCCTCCTCCTCCT
TCTCTTCCTCCTCCGTCTCTTCCTCCTCCTGCTCCCTCCTCATCACCCCG
ATTTCCTCCTCCTCCTCTTCTTCCTCTTCTCCCTCGTCCTCCCTCCCTTC
ACCATCGCTCTTCGCCCTTGATAGCACCGCATTTCGCGCCCTTTTCTACG
GGAGTCTGGGCCAAGGCTGTCTCCAGACCCTTCGACAGATCCCGCTGTTC
CAGCGCCTCTCCATCTCCGACCTGACCCTCATTGCCATGGCTCTCGGAAA
GCACGGGAGCAGCTCCTTCAAGAAGGGCGAGCTCATCGAGCCCATGGGGC
AGATGGGGTCCGGGGGAGGGAGGGAGGGCGGGCGGGTGGGTACTGCGCAA
GTAGGGGGCGGGTTTTTGATGGTGAGGCAAGGAGTGGTGGAGGTGAGGAG
GAGGGAGGATAACAGCAAGGTGGGGAGGAGAATGAAGGTGTTGGACTATG
TCTTGGAAGGGTGCTTGGCGAGGGGAGGGGGAGAGAGGCAGGGAGGGAGG
GGGGGGGGAGGGGGGCAATTGTTGCCGGGTCGACGCCCTGTGTGGTGCTG
CGGGTCCGAGTGTCGGGAGGAGGAGAAGGGGGAGGGAGGGAAGGGGGAGG
AGGGGATGGGCAAGGAGCAGTGGTTGCTGAAATAG
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Coding sequence (CDS) from alignment at chr30:251959..252793+

>NO30G00680.1 ID=NO30G00680.1|Name=NO30G00680.1|organism=Nannochloropsis oceanica|type=CDS|length=786bp|location=Sequence derived from alignment at chr30:251959..252793+ (Nannochloropsis oceanica)
atggccttgatcaaggcagggaaagaaggaggacgaggaagggagggagg
aaggacaccaggtttgattgctgcgagcaatccacccctctcccgaagca
attccgcctcctccgcctcctccctccctTCCTCCTCCTCCTCCTCCTCC
TTCTCTTCCTCCTCCGTCTCTTCCTCCTCCTGCTCCCTCCTCATCACCCC
GATTTCCTCCTCCTCCTCTTCTTCCTCTTCTCCCTCGTCCTCCCTCCCTT
CACCATCGCTCTTCGCCCTTGATAGCACCGCATTTCGCGCCCTTTTCTAC
GGGAGTCTGGGCCAAGGCTGTCTCCAGACCCTTCGACAGATCCCGCTGTT
CCAGCGCCTCTCCATCTCCGACCTGACCCTCATTGCCATGGCTCTCGGAA
AGCACGGGAGCAGCTCCTTCAAGAAGGGCGAGCTCATCGAGCCCATGGGG
CAGATGGGGTCCGGGGGAGGGAGGGAGGGCGGGCGGGTGGGTACTGCGCA
AGTAGGGGGCGGGTTTTTGATGGTGAGGCAAGGAGTGGTGGAGGTGAGGA
GGAGGGAGGATAACAGCAAGGTGGGGAGGAGAATGAAGGTGTTGGACTAT
GTCTTGGAAGGGTGCTTGGCGAGGGGAGGGGGAGAGAGGCAGGGAGGGAG
GGGGGGGGGAGGGGGGCAATTGTTGCCGGGTCGACGCCCTGTGTGGTGCT
GCGGGTCCGAGTGTCGGGAGGAGGAGAAGGGGGAGGGAGGGAAGGGGGAG
GAGGGGATGGGCAAGGAGCAGTGGTTGCTGAAATAG
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Synonyms
Publications