NO30G00450.2, NO30G00450.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO30G00450.2
Unique Name	NO30G00450.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3097
Alignment location	chr30:184418..190126 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr30	genome	chr30:184418..190126 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO30G00450.2 vs.
Match: XP_004363807.1 (hypothetical protein CAOG_02968 [Capsaspora owczarzaki ATCC 30864]; KJE91907.1 hypothetical protein CAOG_002968 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 229.2 bits (583), Expect = 3.800e-56
Identity = 141/408 (34.56%), Postives = 229/408 (56.13%), Query Frame = 0

Query:  267 NINNSGSLNKGRPEPHIEEAMFDLDPDFDLSAPHLMKMFNMLDRDHNGRLTYEELREGLLSMRGMHTIPAARVDQIIRRIDKDESYDISQEEFVAAFQHLATKAMAMSSRRLGRPSSLLEFFVYDYGPDTAVCRWVY--SRLGQ-------GPVDEQALEAS-------------------LDDFFQEPIEDVKGNNVRWISITGLEPSVVVRLANRYHLHPLQLEDVL-TCDKERMKSTKTGSVHQVIVGRATL-TESSQGYPQIRKEQVTLFLLEDRNTVISIQKTPSEINSLLLGRIMYAGSKIRLNGPRFLAYALVDSIVDELFPILRLMRKKLKALHSDVTSMRKTSLESVHLIQHIIREVNLLLLWLSPLGTVTTRLQAELPTEKDDCIELKKHLEDLGDHV 645
            +++++  L     EP +E     LDPDFDLS PHL+K+FN LD D +G +    +   L S+  +    A    Q++  + K +   ++QE+FV A Q +    ++ ++    +   +L+ F YDYGP  A+CRWV    R+         G V E A + S                   L  F +  +   +   VRWI++ G + S ++R++N Y LHPLQ+ED+L T ++ +++    G++H +++ R TL +  S+ + Q+  +Q+ + LL   +TVI+I+K P+     LL RI YAGSK+RLN  RFL YA+VD IVD++FP+L+    +L+ L + V   ++T+L +   +QH+ RE+N L+ WL  L +V  RL  ELP +  D ++++KH+EDL DHV
Sbjct:  378 SVSSADDLPPVMHEPALEHG---LDPDFDLSVPHLLKLFNALDADKDGEVALSRI---LSSLEPLARAGARSPRQLVMHMFKGQE-SVTQEQFVLAMQEIGVMLLSRTTGVAVQDQVMLDMFCYDYGPSQAICRWVSPDPRMSMSSPPNCIGEVHEPATDPSMPTSGSANSLNDIQEGTITLSHFLRRTVPH-QSLPVRWINMVGNDASTIIRVSNAYKLHPLQIEDMLNTKERPKVEINSDGTMH-IVISRLTLKSYDSKDWLQLVTDQLNICLLHADSTVITIEKKPAATTHTLLQRISYAGSKVRLNNARFLIYAMVDGIVDDVFPVLKAFHYQLRQLQTLVLGRKQTTLATAKELQHLHRELNNLVFWLHSLSSVINRLLEELP-QGTDALDIRKHMEDLKDHV 775

The following BLAST results are available for this feature:

BLAST of NO30G00450.2 vs.

BLAST of NO30G00450.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_004363807.1	3.800e-56	34.56	hypothetical protein CAOG_02968 [Capsaspora owczar...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO30G00450	NO30G00450	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00450.2	NO30G00450.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00450.2.cds1	NO30G00450.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00450.2.cds2	NO30G00450.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00450.2.cds3	NO30G00450.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00450.2.cds4	NO30G00450.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00450.2.cds5	NO30G00450.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00450.2.cds6	NO30G00450.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00450.2.cds7	NO30G00450.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00450.2.cds8	NO30G00450.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00450.2.cds9	NO30G00450.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr30:184418..190126-
coding sequence from alignment at chr30:184418..190126-

mRNA sequence

>NO30G00450.2 ID=NO30G00450.2|Name=NO30G00450.2|organism=Nannochloropsis oceanica|type=mRNA|length=3097bp
ACAGACAACTTGAATCACACCGGCGATCGTTTGGACCTCTAGTTCGCAGG
GCTACTACGCGCCTCCCCACTCCATTGCTGCTCCTGAGCACTCCCATCAT
CATCGTCGGCGAGCGCCAGCGTTTGTGTTTGACTCAACTCCTTCCGTACA
CCACCACCACCTGGCACGATGCGCAGCGAAAGCCAGCCTCTGCTGGGCAA
TAAAAAGAAAAACAGGCCCGGCCCTGCACAGGCCTCTTCGCCCCCCCTAA
ATGTGCCCAGTGCGGGAGCAGGAGGCGGAGGGTTCGTGTCCGTCGTGCCC
GACCCCAATCTCCTCCTTTCTCCCTCGCAGCAGGAGTCGGAGCAGCAGCA
ACAAGAACAAGCCCCCTACCCTCATCTCCGCCGAAGCAGCCTGGGCAATG
TCCTGGACTTCTCGCAGGGGGTAGCATCCGGTGCATTCATGCACCGAGCT
AGCTTGGGTGGGGGCGGGGCACCGCCTCCTTTTCCCGGGGCAATGTCTTT
GCCCGCCTCACCCCCTTTCGAAGCCGGGCCAGTCATGCACTTTGTTGACG
GCGATCGAGGCGACGACGGGCAGACAGATCGAAGCGGTTCAGGGCGGGGA
TCGGAGTTGCTGCAAGGGTCGCCCTCGTCAACTTACCGGCACGCGCACAC
CCACAGTCACCCCCTCAGCAGCCAGCAGAGCGAGGATGTGGGCTTGCTGT
CCGGTAGTCTGCACCGGTCCACTACGGTGGGGCCCGGCAGCTACATCCCC
GCCTCTGCCCACCACATGATGGAGATGATGACCACTCCAGGGCGGGGCGG
AGGGGCAACGGGAGGACTTGGCGCCACAGTTGAGGATGGGGGGGGAGGCC
GTGGCGGCGGCGGCGGCCTCGGAGGCAGCGACAACGGCGGGGGCAGCAAC
AATAACAGGAGCAGCAACAGCAACAACAACAACATAAGCAGCAACAGCAA
CAACAACAATAGCGGCAATATCAATAACAGCGGTAGTTTGAATAAGGGGA
GGCCGGAGCCGCACATCGAGGAGGCCATGTTTGACCTGGACCCAGACTTC
GACCTGTCGGCGCCGCACTTGATGAAGATGTTCAACATGCTCGACAGAGA
TCATAACGGCCGACTGACGTACGAGGAGCTGCGGGAGGGCTTGTTGTCCA
TGCGGGGGATGCACACCATCCCCGCCGCCCGGGTGGACCAGATAATCCGG
CGCATCGACAAAGATGAAAGCTACGACATTTCCCAGGAGGAGTTCGTTGC
CGCTTTCCAGCACCTGGCCACCAAGGCCATGGCCATGTCCTCGCGCCGCC
TGGGTCGACCCTCGAGCCTCCTGGAGTTCTTTGTCTACGATTACGGGCCC
GACACGGCTGTCTGTCGGTGGGTCTACTCGCGCCTGGGACAAGGGCCGGT
GGACGAGCAGGCCCTAGAGGCCTCTTTAGACGATTTTTTCCAGGAGCCGA
TCGAGGACGTGAAGGGCAACAACGTCAGATGGATCTCCATCACCGGCCTC
GAGCCCTCCGTGGTGGTCCGCCTGGCCAACAGGTACCACTTGCACCCGCT
GCAGCTGGAAGACGTGCTGACATGTGACAAGGAGCGGATGAAGTCGACCA
AGACGGGCTCGGTGCACCAGGTCATCGTGGGGCGGGCCACCCTCACCGAG
TCCTCGCAGGGCTACCCCCAGATCCGCAAGGAGCAGGTGACGCTATTTTT
GCTCGAGGACCGCAACACGGTCATTTCCATCCAGAAGACGCCCTCGGAGA
TCAACTCCCTCCTGCTCGGCCGCATCATGTATGCGGGGTCCAAGATCAGG
CTTAACGGGCCCCGCTTCCTGGCCTATGCCCTTGTCGACTCCATCGTGGA
CGAGCTCTTCCCCATATTGAGGCTGATGCGCAAGAAGCTCAAGGCCCTGC
ACTCGGACGTGACGAGCATGAGGAAAACCTCCCTGGAGTCTGTCCACCTC
ATCCAGCATATCATCCGCGAGGTGAACCTGCTGCTGCTGTGGTTGTCCCC
CCTGGGCACTGTGACGACGCGGCTGCAGGCGGAGCTACCCACGGAGAAGG
ACGACTGCATCGAGCTGAAGAAGCACCTGGAAGACCTTGGGGATCACGTT
CACGGTGCGAGGAAGGGGGAAGGGAGGGGGTGGAGCAGTAGGATCGTCGT
TAATCGTCGTTTTGTTTCTCTGCGAAAGATATAGGCTTGGATCGTGTCAC
GGCCCCCTCGTCCTCGTCCTGGTCTTGGCCCCCTTCCCTTCCCCCCCCTC
TCCCTCCCGACTACATGACGTTATTATTCTTCATGTCGTCTCAACGGGCC
TCTCACTCCCTCCCTCCCCATCACCTTACTGTTGCCCATGTCGTCTTGCC
TAGCTCTCAAGGAGCAGACATCGTCCATGGTGGGATGGGCCAAATCCCTC
AACGACGAGTACCTGAACGAGCAGCAGTACCGCATGAACCAGGTCATTTA
TCTCCTCACCATGGTGACGGTGATGTGCCTGCCCGCGCAGTTCCTGACGG
GTGTCTTCGGCATGAATTTCGAGCACTTCCCTCTACTCAAGTCCCCGGAT
GGCTTCCTCATCTTCTGGCTCATGACGGGCAGCGCCATCGTCGTCATCAT
GGTTGTCTTCAGGCTCAAGAGCTGGATGTAGAAGTAGGGGAAGGAAATCA
ATCAAGCATTTATTTTAAAAAAATAGAAACTGAATGAACCGAGGAATACA
TTTCGGAGAAAGGAGATGCCGTGGGAATTCAGGAAGGCACAGACGAAATT
ACCCAGATTTTGATGCTCAAATTCTCATGCATGGAGATAACTTGATTGTG
AGGAAACGTCTGGTGTGCTCGTGTGGGTGGGGAGGGTGTGTGTGCATGGA
GTGTGTACATAAGGAACATCAGTAAGAAATTTGCTGTTCGGCTGGAGTCA
GGATATGGGATGGACAAATAAGCAGGGATAGATATGTGTATCGAGGTGTG
TAGTGGAAACACCCTCTTATTTTTGGGCGGAGGTGACGATGGTGATGCTG
AGGGAGGGGGGAAACGGGTGGGAGTGAAAGAGGGGCATAAATGTGTGTCT
GCGCTAAAAAAGTTAATTAAAACTAGCGAATTGATGATGGATATGTG

protein sequence of NO30G00450.2

>NO30G00450.2-protein ID=NO30G00450.2-protein|Name=NO30G00450.2|organism=Nannochloropsis oceanica|type=polypeptide|length=672bp
MRSESQPLLGNKKKNRPGPAQASSPPLNVPSAGAGGGGFVSVVPDPNLLL
SPSQQESEQQQQEQAPYPHLRRSSLGNVLDFSQGVASGAFMHRASLGGGG
APPPFPGAMSLPASPPFEAGPVMHFVDGDRGDDGQTDRSGSGRGSELLQG
SPSSTYRHAHTHSHPLSSQQSEDVGLLSGSLHRSTTVGPGSYIPASAHHM
MEMMTTPGRGGGATGGLGATVEDGGGGRGGGGGLGGSDNGGGSNNNRSSN
SNNNNISSNSNNNNSGNINNSGSLNKGRPEPHIEEAMFDLDPDFDLSAPH
LMKMFNMLDRDHNGRLTYEELREGLLSMRGMHTIPAARVDQIIRRIDKDE
SYDISQEEFVAAFQHLATKAMAMSSRRLGRPSSLLEFFVYDYGPDTAVCR
WVYSRLGQGPVDEQALEASLDDFFQEPIEDVKGNNVRWISITGLEPSVVV
RLANRYHLHPLQLEDVLTCDKERMKSTKTGSVHQVIVGRATLTESSQGYP
QIRKEQVTLFLLEDRNTVISIQKTPSEINSLLLGRIMYAGSKIRLNGPRF
LAYALVDSIVDELFPILRLMRKKLKALHSDVTSMRKTSLESVHLIQHIIR
EVNLLLLWLSPLGTVTTRLQAELPTEKDDCIELKKHLEDLGDHVHGARKG
EGRGWSSRIVVNRRFVSLRKI*

mRNA from alignment at chr30:184418..190126-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO30G00450.2 ID=NO30G00450.2|Name=NO30G00450.2|organism=Nannochloropsis oceanica|type=mRNA|length=5709bp|location=Sequence derived from alignment at chr30:184418..190126- (Nannochloropsis oceanica)
ACAGACAACTTGAATCACACCGGCGATCGTTTGGACCTCTAGTTCGCAGG
GCTACTACGCGCCTCCCCACTCCATTGCTGCTCCTGAGCACTCCCATCAT
CATCGTCGGCGAGCGCCAGCGTTTGTGTTTGACTCAACTCCTTCCGTACA
CCACCACCACCTGGCACGATGCGCAGCGAAAGCCAGCCTCTGCTGGGCAA
TAAAAAGAAAAACAGGCCCGGCCCTGCACAGGCCTCTTCGCCCCCCCTAA
ATGTGCCCAGTGCGGGAGCAGGAGGCGGAGGGTTCGTGTCCGTCGTGCCC
GACCCCAATCTCCTCCTTTCTCCCTCGCAGCAGGAGTCGGAGCAGCAGCA
ACAAGAACAAGCCCCCTACCCTCATCTCCGCCGAAGCAGCCTGGGCAATG
TCCTGGACTTCTCGCAGGGGGTAGCATCCGGTGCATTCATGCACCGAGCT
AGCTTGGGTGGGGGCGGGGCACCGCCTCCTTTTCCCGGGGCAATGTCTTT
GCCCGCCTCACCCCCTTTCGAAGCCGGGCCAGTCATGCACTTTGTTGACG
GCGATCGAGGCGACGACGGGCAGACAGATCGAAGCGGTTCAGGGCGGGGA
TCGGAGTTGCTGCAAGGGTCGCCCTCGTCAACTTACCGGCACGCGCACAC
CCACAGTCACCCCCTCAGCAGCCAGCAGAGCGAGGATGTGGGCTTGCTGT
CCGGTAGTCTGCACCGGTCCACTACGGTGGGGCCCGGCAGCTACATCCCC
GCCTCTGCCCACCACATGATGGAGATGATGACCACTCCAGGGCGGGGCGG
AGGGGCAACGGGAGGACTTGGCGCCACAGTTGAGGATGGGGGGGGAGGCC
GTGGCGGCGGCGGCGGCCTCGGAGGCAGCGACAACGGCGGGGGCAGCAAC
AATAACAGGAGCAGCAACAGCAACAACAACAACATAAGCAGCAACAGCAA
CAACAACAATAGCGGCAATATCAATAACAGCGGTAGTTTGAATAAGGGGA
GGCCGGAGCCGCACATCGAGGAGGCCATGTTTGACCTGGACCCAGACTTC
GACCTGTCGGCGCCGCACTTGATGAAGATGTTCAACATGCTCGACAGAGA
TCATAACGGTGAGAGGGAGAGGGAGGGATGTAGGAGTGAGAGGGAGAGGG
AGGGATGTAGGAGTGAGAGGGAGGGTGGGAGGGTGGACGGAAGGCTGGCA
TGGAAGAGGGAGGAGGGACGATGGACGGAAGGTCAGGTCGGTAGGGAAGA
GGGCAAGCTTGCATTTGCGCCGTGTGTTCGAGGAGACAAGGGAAAGGCGA
AGAAGCGTGCCCCTGGACATGCCACAATCGAAACCCACGAAAGTCGACTT
AGTCGTAATAATCTCTATCCATCACTGTCGTTGTCTGCTCCCTCTGCCCC
GACTAGGCCGACTGACGTACGAGGAGCTGCGGGAGGGCTTGTTGTCCATG
CGGGGGATGCACACCATCCCCGCCGCCCGGGTGGACCAGATAATCCGGCG
CATCGACAAAGATGAAAGCTACGACATTTCCCAGGTACACCGAGAGGAAG
AAGAAAAAGAAAAAGGAGGAGAAGGAGAGGGGGAGGGAGAGAAGTGGGCG
AGGGAGAGGGTGTGTGGAAGAGTCAGGAGGTGCTCTCCTGTCTTTCTAGC
CTGTGACAAGATAAATGCATTCCATCGCGCCCACTCCTTGTTCTCACCCT
CACCCTTCTACCCGCCTCTCTCCCCTCCCTCCCCCGGCCTATCTCCAGGA
GGAGTTCGTTGCCGCTTTCCAGCACCTGGCCACCAAGGCCATGGCCATGT
CCTCGCGCCGCCTGGGTCGACCCTCGAGCCTCCTGGAGTTCTTTGTCTAC
GATTACGGGCCCGACACGGCTGTCTGTCGGTGGGTCTACTCGCGCCTGGG
ACAAGGGCCGGTGGACGAGCAGGTGAGGAAGGGGGGAAGGGTGGGAAGGG
TGGCAGGAGGGGGGTCGTCGGTCGATGTGGTCCTACTTACGGACGGGACA
AGAGGCAACTCAGCCACACGTTCTTCTTTTCCTTCCTATATTCCCCCTCT
TTTCCCCTCCCTCTTTCCCGTCCCTCTTTCCCCTCCCTCGCCCACGCAGG
CCCTAGAGGCCTCTTTAGACGATTTTTTCCAGGAGCCGATCGAGGACGTG
AAGGGCAACAACGTCAGATGGATCTCCATCACCGGCCTCGAGCCCTCCGT
GGTGGTCCGCCTGGCCAACAGGTGCGTGCGTGCTGAGAGGTCCAGGGGGG
ATGATCGACAGACTGACATCCGGGAGGGAGGGCATTGATTGGTATAGGTA
GGGTTTCAGCCTCGGAGGGGATCTTGGGTGGTTTCATATTAGACCAGAAA
GTCGTGCTTGTTTGCCTGCCACCACCTCGCATGCTTTGCGGAACAAATGT
GATGATAAGGGCGCCTGAACCCTCCCTCCCTCCTTCTTCGCCCTCTTTCT
CCCGTTCCTCCTCCCCCTCCGCAGGTACCACTTGCACCCGCTGCAGCTGG
AAGACGTGCTGACATGTGACAAGGAGCGGATGAAGTCGACCAAGACGGGC
TCGGTGCACCAGGTCATCGTGGGGCGGGCCACCCTCACCGAGTCCTCGCA
GGGCTACCCCCAGATCCGCAAGGAGCAGGTAAAGGAAGAGGGGGTAGTGG
ACGGAAGGGGAGGGAGGAAGGAGGGAACACATTTTTATGCTTGTTGTTTC
CGCGAGTTATCGTTCAAAGAAGGAGAGTAAGGCCAAGTACTGTGATGGTA
GCTCCTCATTACCCGCTTGGAAGGCAGGCCGGGAACAAATGTCTTCCATG
CGCTCTTGACTGCTTGGCACCCATCTCACGCTCCACTACTTTTTGCTGTT
TGTCGTCCTCCTCCTTCACTCCACCTCCTCATGCTTGCACTGCACTGCCC
ACCTTCTTCTTCTCCCCCACTGCCAGGTGACGCTATTTTTGCTCGAGGAC
CGCAACACGGTCATTTCCATCCAGAAGACGCCCTCGGAGATCAACTCCCT
CCTGCTCGGCCGCATCATGTAAGGATACCACCATCCACCATGTCCGGCAC
CGAGGAGGAAATGGAAGGGAAAGAGGAAGAGGAGGGCACGTGGATTACGA
TAAAGAGGGGCAATGCGCCGGGAGCAGTGAGGGCGCCCGAATCCGTTAAG
TTCCTGATACCTCCTCCGCTCCTCCTTCTTAATCTGCCCGTCTCTCTTTC
CCTTCCCCCTCTCCCCCCCCAAGGTATGCGGGGTCCAAGATCAGGCTTAA
CGGGCCCCGCTTCCTGGCCTATGCCCTTGTCGACTCCATCGTGGACGAGC
TCTTCCCCATATTGAGGCAAGGGAGGGGGGGAGGAGGGGAGGAAGGGAGG
GAGGGATGGGAGGACGGGGGGAAGAAAGGCCATGCAACACACAAGGACAG
CATTGAGGAAGAATATATATATATAGACATATTTATAGAAGGGCGAGGTG
TTAGTTTTCTCTCTTTCCTCCTCCCTCTCTCGGTTCCTCCATTTCTCATT
TCTCTCCCCACCTCCGTGGCAGGCTGATGCGCAAGAAGCTCAAGGCCCTG
CACTCGGACGTGACGAGCATGAGGAAAACCTCCCTGGAGTCTGTCCACCT
CATCCAGCATATCATCCGCGAGGTACGTCTACCCTCCCTCCCTCTCTCCC
GCCCTCTTTCCTTCCCTGCCATCCTACCACCCTTCCTCTGTGTTTGACGT
GCCCGTGCTGTCCTCGGCCCATCTTTGTCAAGGGGGCGCACGTCTAGCCT
ATCACCCTCCCTCCCTCACTTTCCCTCACCATCCCTCATTCTCCCTCACC
CTCCCTTCCTTCACTCTCTTCCCCCCCCCCCTGGCCCGTACGTAGGTGAA
CCTGCTGCTGCTGTGGTTGTCCCCCCTGGGCACTGTGACGACGCGGCTGC
AGGCGGAGCTACCCACGGAGAAGGACGACTGCATCGAGCTGAAGAAGCAC
CTGGAAGACCTTGGGGATCACGTTCACGGTGCGAGGAAGGGGGAAGGGAG
GGGGTGGAGCAGTAGGATCGTCGTTAATCGTCGTTTTGTTTCTCTGCGAA
AGATATAGGCTTGGATCGTGTCACGGCCCCCTCGTCCTCGTCCTGGTCTT
GGCCCCCTTCCCTTCCCCCCCCTCTCCCTCCCGACTACATGACGTTATTA
TTCTTCATGTCGTCTCAACGGGCCTCTCACTCCCTCCCTCCCCATCACCT
TACTGTTGCCCATGTCGTCTTGCCTAGCTCTCAAGGAGCAGACATCGTCC
ATGGTGGGATGGGCCAAATCCCTCAACGACGAGTACCTGAACGAGCAGCA
GTACCGCATGAACCAGGTCATTTATCTCCTCACCATGGTAGGTAGGGAGG
GAAACAGGCAGGGGGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGATGTCGGACAAGTTGAGGGCGAAGAAGTCATATCCATCCA
TACACATTGTATGAATGTGTATTTATACGACCTTATTTAGTTATATTTAA
AGTTGTAGTCGTATTTATTTATGTATACATAGTCATGACTAATATTTATA
CATACAAAAACACGTATGTGTGCATTCATTAATTGACACACACACCCCTA
GGTGACGGTGATGTGCCTGCCCGCGCAGTTCCTGACGGGTGTCTTCGGCA
TGAATGTACGTGCTGGGGGTGGTCAAGGTAGTCGTGGAGGTGGGCGTGCC
AGAGGGTGCTGGTGATGTTCGTCGAGATGGGCGTGGGAGCGAAGAGGCTG
CCACGGCCGGCTTGACTGTCGGCTTCAATGTGGGCCCGCTCTCTCGGCTT
CAACCCCGTGGAGGCTTTCCTTGCTTCTTCCCTTGGCGATTTCCCTCTCC
TACCTCCATTCCTCCTTTCTCCTTTTCCTTCCTCTTGCAACGCAGATTCG
GTCTCTGCTCCGAACCCTCTTGTCCTCTATATACCTTTATCCTGTCCTCC
ATTTCCTCCCTTGAACCCCAATCCCTACCCATTGACTGCGTGTGGAACGC
GTCCCCCCAAACAATCCCTGATCAAACCCCAATCAAATTCCAATCAATCC
CATTCAAACCCTAATCAATCCCTTATCACTAATCACCAATCAATTCCTGA
TCATCCCTTATCAATCCTACTGACTGCAGTTCGAGCACTTCCCTCTACTC
AAGTCCCCGGATGGCTTCCTCATCTTCTGGCTCATGACGGGCAGCGCCAT
CGTCGTCATCATGGTTGTCTTCAGGCTCAAGAGCTGGATGTAGAAGTAGG
GGAAGGAAATCAATCAAGCATTTATTTTAAAAAAATAGAAACTGAATGAA
CCGAGGAATACATTTCGGAGAAAGGAGATGCCGTGGGAATTCAGGAAGGC
ACAGACGAAATTACCCAGATTTTGATGCTCAAATTCTCATGCATGGAGAT
AACTTGATTGTGAGGAAACGTCTGGTGTGCTCGTGTGGGTGGGGAGGGTG
TGTGTGCATGGAGTGTGTACATAAGGAACATCAGTAAGAAATTTGCTGTT
CGGCTGGAGTCAGGATATGGGATGGACAAATAAGCAGGGATAGATATGTG
TATCGAGGTGTGTAGTGGAAACACCCTCTTATTTTTGGGCGGAGGTGACG
ATGGTGATGCTGAGGGAGGGGGGAAACGGGTGGGAGTGAAAGAGGGGCAT
AAATGTGTGTCTGCGCTAAAAAAGTTAATTAAAACTAGCGAATTGATGAT
GGATATGTG

Coding sequence (CDS) from alignment at chr30:184418..190126-

>NO30G00450.2 ID=NO30G00450.2|Name=NO30G00450.2|organism=Nannochloropsis oceanica|type=CDS|length=2016bp|location=Sequence derived from alignment at chr30:184418..190126- (Nannochloropsis oceanica)
ATGCGCAGCGAAAGCCAGCCTCTGCTGGGCAATAAAAAGAAAAACAGGCC
CGGCCCTGCACAGGCCTCTTCGCCCCCCCTAAATGTGCCCAGTGCGGGAG
CAGGAGGCGGAGGGTTCGTGTCCGTCGTGCCCGACCCCAATCTCCTCCTT
TCTCCCTCGCAGCAGGAGTCGGAGCAGCAGCAACAAGAACAAGCCCCCTA
CCCTCATCTCCGCCGAAGCAGCCTGGGCAATGTCCTGGACTTCTCGCAGG
GGGTAGCATCCGGTGCATTCATGCACCGAGCTAGCTTGGGTGGGGGCGGG
GCACCGCCTCCTTTTCCCGGGGCAATGTCTTTGCCCGCCTCACCCCCTTT
CGAAGCCGGGCCAGTCATGCACTTTGTTGACGGCGATCGAGGCGACGACG
GGCAGACAGATCGAAGCGGTTCAGGGCGGGGATCGGAGTTGCTGCAAGGG
TCGCCCTCGTCAACTTACCGGCACGCGCACACCCACAGTCACCCCCTCAG
CAGCCAGCAGAGCGAGGATGTGGGCTTGCTGTCCGGTAGTCTGCACCGGT
CCACTACGGTGGGGCCCGGCAGCTACATCCCCGCCTCTGCCCACCACATG
ATGGAGATGATGACCACTCCAGGGCGGGGCGGAGGGGCAACGGGAGGACT
TGGCGCCACAGTTGAGGATGGGGGGGGAGGCCGTGGCGGCGGCGGCGGCC
TCGGAGGCAGCGACAACGGCGGGGGCAGCAACAATAACAGGAGCAGCAAC
AGCAACAACAACAACATAAGCAGCAACAGCAACAACAACAATAGCGGCAA
TATCAATAACAGCGGTAGTTTGAATAAGGGGAGGCCGGAGCCGCACATCG
AGGAGGCCATGTTTGACCTGGACCCAGACTTCGACCTGTCGGCGCCGCAC
TTGATGAAGATGTTCAACATGCTCGACAGAGATCATAACGGCCGACTGAC
GTACGAGGAGCTGCGGGAGGGCTTGTTGTCCATGCGGGGGATGCACACCA
TCCCCGCCGCCCGGGTGGACCAGATAATCCGGCGCATCGACAAAGATGAA
AGCTACGACATTTCCCAGGAGGAGTTCGTTGCCGCTTTCCAGCACCTGGC
CACCAAGGCCATGGCCATGTCCTCGCGCCGCCTGGGTCGACCCTCGAGCC
TCCTGGAGTTCTTTGTCTACGATTACGGGCCCGACACGGCTGTCTGTCGG
TGGGTCTACTCGCGCCTGGGACAAGGGCCGGTGGACGAGCAGGCCCTAGA
GGCCTCTTTAGACGATTTTTTCCAGGAGCCGATCGAGGACGTGAAGGGCA
ACAACGTCAGATGGATCTCCATCACCGGCCTCGAGCCCTCCGTGGTGGTC
CGCCTGGCCAACAGGTACCACTTGCACCCGCTGCAGCTGGAAGACGTGCT
GACATGTGACAAGGAGCGGATGAAGTCGACCAAGACGGGCTCGGTGCACC
AGGTCATCGTGGGGCGGGCCACCCTCACCGAGTCCTCGCAGGGCTACCCC
CAGATCCGCAAGGAGCAGGTGACGCTATTTTTGCTCGAGGACCGCAACAC
GGTCATTTCCATCCAGAAGACGCCCTCGGAGATCAACTCCCTCCTGCTCG
GCCGCATCATGTATGCGGGGTCCAAGATCAGGCTTAACGGGCCCCGCTTC
CTGGCCTATGCCCTTGTCGACTCCATCGTGGACGAGCTCTTCCCCATATT
GAGGCTGATGCGCAAGAAGCTCAAGGCCCTGCACTCGGACGTGACGAGCA
TGAGGAAAACCTCCCTGGAGTCTGTCCACCTCATCCAGCATATCATCCGC
GAGGTGAACCTGCTGCTGCTGTGGTTGTCCCCCCTGGGCACTGTGACGAC
GCGGCTGCAGGCGGAGCTACCCACGGAGAAGGACGACTGCATCGAGCTGA
AGAAGCACCTGGAAGACCTTGGGGATCACGTTCACGGTGCGAGGAAGGGG
GAAGGGAGGGGGTGGAGCAGTAGGATCGTCGTTAATCGTCGTTTTGTTTC
TCTGCGAAAGATATAG

Synonyms

Publications