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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr30 | genome | chr30:165938..169970 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO30G00380.1 vs.
Match: WP_077513849.1 (prolyl aminopeptidase [Rhodanobacter sp. B05]; OOG54968.1 prolyl aminopeptidase [Rhodanobacter sp. B05]) HSP 1 Score: 471.1 bits (1211), Expect = 5.000e-129 Identity = 215/318 (67.61%), Postives = 261/318 (82.08%), Query Frame = 0
Query: 241 TEPPPKELYPPLQAFRTGMLPVSAVHTLYWEESGNPQGKPVVFLHGGPGGGTAPDFRRYFDPAVYRIVIFDQRGCGRSTPHASLEENTTWDMVEDIEKLRLHLGIDRWTVFGGSWGSTLSLTYAITHPERVTELVLRGIFMLRHKELAWYYQEGASWIYPDAFEPYLEHIPEAERGDLMLAYNKRLTSPDARVRLPAAREWTRWEMATSRLIPDQVVINKADDDDFSLAFARIENHFFINRGFFPYDDWILKNVDKIRHIPTVIVQGRYDSVCPIRSAWDLFRAFPESDLVIVQDAGHASSEPGIRSELIKACDSFGK 559
+ PP + LYP ++ F +G LPVS +HTLY+E+SGNP GKPVVFLHGGPGGGT P RR+FDPA+YRIV+FDQRGCG+STPHA L +NTTWD+V DIE+LR HLGI+RW VFGGSWGSTL+L YA THP++VTELVLRGIFMLR EL W+YQ+G S +YPDA+E YL IPE ERGDLM AY++RLTS DA+ R AAR W+ WE ATS L DQ I + +D+F+LAFARIE H+F+N GFF +DD +L+NVD+IR+IP VIVQGRYD VCP+RSAWDL RA+PE+DL IVQDAGH++ EPGI EL++A D FG+
Sbjct: 2 SSPPLRSLYPDIEPFDSGFLPVSPLHTLYYEQSGNPHGKPVVFLHGGPGGGTTPKCRRFFDPALYRIVLFDQRGCGQSTPHAELSDNTTWDLVADIERLREHLGIERWQVFGGSWGSTLALAYAQTHPDKVTELVLRGIFMLRRDELEWFYQKGCSTLYPDAWEAYLAAIPEVERGDLMSAYHRRLTSSDAKTRTDAARAWSVWEGATSFLWQDQSHIQSSGEDEFALAFARIECHYFVNGGFFAHDDQLLRNVDRIRNIPAVIVQGRYDVVCPLRSAWDLHRAWPEADLRIVQDAGHSAFEPGILHELVEATDRFGR 319
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO30G00380.1 ID=NO30G00380.1|Name=NO30G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2423bp TCTTGTTCTCTTCCGTGTTGTCCTTGTTGTTTTCGTGTATGCGTGTGAGT TCGTAAACTGACTGCTGCTTTTGACGTGAGCAGCTCGCCGACAGCGAATA GAGCGAAGCTTGCACTGCGCTGTGCTGCATCAACCTCGGCGACGTCTCAA CAACGCCCGCGAACACACCCTTCCACCACTTCACCACGCACATGACCACA GGCAGGGAGAGCAGTCGTAACTTGCAAGTCTGCTTCATCTCCTGTGCTCG GGGGTGGAAGAAAAAAAGCGGTACTCCAAAGTTACACCCCTACCCGTCCT TCCACTCCAACCTCAACCACTGTCCATGCCCGTCATCCCCCTGTTGCAGC TTTTGCCATTGTCCACCATTAGCACTAGTCAACTACACCGCCGTCTACCC CTCTTCGTGGCCATGCTCTTCCTTACCTGTACCACCACGACTGCCACGGC CACTGCTGCCGCCACTCGAAGTCTGATGAAGACCCTTAGTAGCAGCAAGA GCTGCGGTAGCAGGAGAGCCAACACCAGCCTCCTCCTCCTCCTCCGCACC CGGGGAGGACAGACTGCCGCTGCGTTCTCTTGGTCTGGCGCTATTTGTGC TGCTGCTGGAGGTAGTAGGCGTGGTACGGCAATATCCGCAACGACGAGGA TGACTGCAACAACGGCGTCCCTCCTGACACGAGCTGGATTTGGTGGAAGA GGAGGAGGAGGTGGAGCAGAAGGACAGAGACGTGGAAGGGTCAATACTGC TCTCGCATTTTCTTCCGCCACTTCCGCTGGTCATACCACCACTAGCTGTG TCAGCAGCAGCAGCAGCTGTGTGGGCAGGTCCTCCTCCTCTTCCTCCTCC TCCTCCACCTCGGCGCAGCAGCGGCAGGGGCACTTTCCTCTCTTTGCCTC GTACCTGGGTGCTGTCGCCCTCTACTCTTCCTTTAACAATGGAGGGGAAA AAGGTGGGGAGGACAGCACCACCGCTGCGTGTGAAGCCGCGGCTTCTATA CCGTCCAAGGAGGGAGGAAGGAAGCAGCCTCGCACCGTCACGGGGACTGA ACCCCCTCCTAAAGAGCTCTACCCGCCTCTGCAGGCATTCCGCACCGGCA TGCTCCCTGTTTCCGCGGTCCACACGCTGTATTGGGAGGAGAGCGGGAAC CCACAGGGGAAGCCGGTGGTGTTTCTGCACGGAGGTCCCGGCGGTGGCAC AGCCCCCGACTTCCGCCGTTACTTCGACCCAGCCGTTTATCGCATTGTCA TCTTCGATCAGCGGGGGTGCGGGAGGAGCACGCCGCATGCCAGCCTGGAA GAGAACACCACGTGGGACATGGTGGAGGATATTGAGAAGCTTCGCCTCCA CCTGGGCATAGACAGGTGGACCGTCTTCGGGGGCTCCTGGGGGTCCACAC TCTCCTTGACCTACGCCATCACGCACCCTGAGCGTGTCACGGAGCTCGTC CTCCGCGGCATTTTCATGCTCCGACATAAAGAGCTCGCCTGGTACTATCA GGAGGGGGCCTCGTGGATCTACCCGGACGCCTTCGAGCCCTACCTCGAGC ACATTCCAGAGGCTGAGCGTGGAGACCTGATGCTTGCCTACAACAAGCGC CTCACCTCCCCCGACGCCCGTGTTCGTCTCCCAGCCGCCCGCGAGTGGAC CCGGTGGGAAATGGCCACCTCCCGACTAATCCCCGACCAGGTCGTCATCA ATAAGGCCGACGACGACGATTTTTCCCTGGCCTTTGCGCGCATCGAGAAT CATTTCTTCATCAACCGAGGCTTTTTCCCTTACGATGACTGGATCCTCAA AAACGTCGACAAGATCCGTCACATCCCCACCGTCATCGTCCAGGGCCGCT ACGACTCGGTGTGTCCGATTCGCTCGGCCTGGGATCTGTTCCGCGCCTTT CCCGAGAGCGACCTGGTCATTGTCCAAGACGCAGGCCACGCCTCGAGCGA GCCCGGCATCAGAAGCGAGTTAATCAAGGCATGTGACAGCTTCGGGAAGG CGGGAGAGGGAGGGAGGGAGGAAGGGTTGAAGACGGGCCAGTGAGGGAGG GCGGGAAGGAGGGCGGGAAGGGGGAAGTCTGGCCCCACATAGCACCAGAG CACGGACGACGATAGAGAGGGTAATGGGAACAGCCACAACGGCGTGGCGT AAGCATACAAGGAGATATATGTATACGGCAAAAGGGATAATAACCACAAC GACAAGAAAAAGAAACGAAGCAAGCGAACAAGCGGCAGATACGGAAGAAA TGAAAACAGCCAAAATCCGATTAAATGGTAATTAGGAATGTGTAGTGCGT TGTCGGCGCGTGGTGAAGAGGAAGTAGTTAGTAATGAGGGCGGCAACGAA GAGGTTGAAAGAAAGTCAACCACTGAGGCACAAAAGAAAGAAAATCAACG AGACAGAACGAAGAGGATCACGA back to topprotein sequence of NO30G00380.1 >NO30G00380.1-protein ID=NO30G00380.1-protein|Name=NO30G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=573bp MPVIPLLQLLPLSTISTSQLHRRLPLFVAMLFLTCTTTTATATAAATRSL MKTLSSSKSCGSRRANTSLLLLLRTRGGQTAAAFSWSGAICAAAGGSRRG TAISATTRMTATTASLLTRAGFGGRGGGGGAEGQRRGRVNTALAFSSATS AGHTTTSCVSSSSSCVGRSSSSSSSSSTSAQQRQGHFPLFASYLGAVALY SSFNNGGEKGGEDSTTAACEAAASIPSKEGGRKQPRTVTGTEPPPKELYP PLQAFRTGMLPVSAVHTLYWEESGNPQGKPVVFLHGGPGGGTAPDFRRYF DPAVYRIVIFDQRGCGRSTPHASLEENTTWDMVEDIEKLRLHLGIDRWTV FGGSWGSTLSLTYAITHPERVTELVLRGIFMLRHKELAWYYQEGASWIYP DAFEPYLEHIPEAERGDLMLAYNKRLTSPDARVRLPAAREWTRWEMATSR LIPDQVVINKADDDDFSLAFARIENHFFINRGFFPYDDWILKNVDKIRHI PTVIVQGRYDSVCPIRSAWDLFRAFPESDLVIVQDAGHASSEPGIRSELI KACDSFGKAGEGGREEGLKTGQ* back to topmRNA from alignment at chr30:165938..169970- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO30G00380.1 ID=NO30G00380.1|Name=NO30G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=4033bp|location=Sequence derived from alignment at chr30:165938..169970- (Nannochloropsis oceanica) TCTTGTTCTCTTCCGTGTTGTCCTTGTTGTTTTCGTGTATGCGTGTGAGT
TCGTAAACTGACTGCTGCTTTTGACGTGAGCAGCTCGCCGACAGCGAATA
GAGCGAAGCTTGCACTGCGCTGTGCTGCATCAACCTCGGCGACGTCTCAA
CAACGCCCGCGAACACACCCTTCCACCACTTCACCACGCACATGACCACA
GGCAGGGAGAGCAGTCGTAACTTGCAAGTCTGCTTCATCTCCTGTGCTCG
GGGGTGGAAGAAAAAAAGCGGTACTCCAAAGTTACACCCCTACCCGTCCT
TCCACTCCAACCTCAACCACTGTCCATGCCCGTCATCCCCCTGTTGCAGC
TTTTGCCATTGTCCACCATTAGCACTAGTCAACTACACCGCCGTCTACCC
CTCTTCGTGGCCATGCTCTTCCTTACCTGTACCACCACGACTGCCACGGC
CACTGCTGCCGCCACTCGAAGTCTGATGAAGACCCTTAGTAGCAGCAAGA
GCTGCGGTAGCAGGAGAGCCAACACCAGCCTCCTCCTCCTCCTCCGCACC
CGGGGAGGACAGACTGCCGCTGCGTTCTCTTGGTCTGGCGCTATTTGTGC
TGCTGCTGGAGGTAGTAGGCGTGGTACGGCAATATCCGCAACGACGAGGA
TGACTGCAACAACGGCGTCCCTCCTGACACGAGCTGGATTTGGTGGAAGA
GGAGGAGGAGGTGGAGCAGAAGGACAGAGACGTGGAAGGGTCAATACTGC
TCTCGCATTTTCTTCCGCCACTTCCGCTGGTCATACCACCACTAGCTGTG
TCAGCAGCAGCAGCAGCTGTGTGGGCAGGTCCTCCTCCTCTTCCTCCTCC
TCCTCCACCTCGGCGCAGCAGCGGCAGGGGCACTTTCCTCTCTTTGCCTC
GTACCTGGGTGCTGTCGCCCTCTACTCTTCCTTTAACAATGGAGGGGAAA
AAGGTGGGGAGGACAGCACCACCGCTGCGTGTGAAGCCGCGGCTTCTATA
CCGTCCAAGGAGGGAGGAAGGAAGCAGCCTCGCACCGTCACGGGGACTGA
ACCCCCTCCTAAAGAGCTCTACCCGCCTCTGCAGGCATTCCGGTACACCC
TCCTCCCCTTCCTCCCTTTAACTCATTCTTCGTTGCTTCCTCCCTCCCTA
ACTTTTCCTCATACTTGGGAAAAAAAGAAGGCTGCTAAACCCTCTTTCCA
CATTCCTGCCCCTCCCTTCCTCCCTCCCTCCCCCCCCCCCTCTCTCCCCA
GCACCGGCATGCTCCCTGTTTCCGCGGTCCACACGCTGTATTGGGAGGAG
AGCGGGAACCCACAGGGGAAGCCGGTGGTGTTTCTGCACGGAGGTCCCGG
TAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGACATCCAGTGACTCACTT
GCTTGCACTACCCCTCCCTCCTTCATTCCCGCCCTCCCTCGGTCCCTCCC
TCGTTCCTGCCCTCCCACAGGCGGTGGCACAGCCCCCGACTTCCGCCGTT
ACTTCGACCCAGCCGTTTATCGCATTGTCATCTTCGATCAGCGGGGGTGC
GGGAGGAGCACGCCGCATGCCAGCCTGGAAGAGAACACGTGAGGAAGGGA
GGGAAGGGGGAAGAAAGGGAGGGAGGAAGGGGACGGCGGAAGAGCAAATA
ATGTAAAGTGTCGCCCTAACCACCCCTCCTCCACTTCCTTCTCTTTTCTC
CCTCTTTTTCCTCCCTCCTCCTCTCCCTCCCCCCTCAGCACGTGGGACAT
GGTGGAGGATATTGAGAAGCTTCGCCTCCACCTGGGCATAGACAGGTGGA
CCGTCTTCGGGGGCTCCTGGGGGTCCACACTCTCCTTGACCTACGCCATC
ACGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAAAGGGA
GGGAGGGATACGTGCCTCGTCTGACTTTGCGCATCTCCTTCTCCCCCCCA
TCCCCTCCCTCCACCCCTCCCTCGTCCCAGCACCCTGAGCGTGTCACGGA
GCTCGTCCTCCGCGGCATTTTCATGCTCCGACATAAAGAGCTCGCCTGGT
ACTATCAGGTAGCAACCCCTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCC
TCCCTTCCTCCCTCCCTCGTACCCTCACCGAAAGCCAGCGGCTGACTATC
CCCCGTGTCCTCCCCATATCCAGGAGGGGGCCTCGTGGATCTACCCGGAC
GCCTTCGAGCCCTACCTCGAGCACATTCCAGAGGCTGAGCGTGGAGACCT
GATGCTTGCCTACAACAAGTGAGGGAGGGAGCGAGGGAGGGAGGGAAGGA
GGGAGGGAAGGAGGGAGGGGGGCAGAAGGGAAGGTCAGCATCGCAGGGTG
GTAAATTATCAATGATTTAAACTTTAACAAACATTTCAAACCTTAACGCA
TGCTTCAATCATTCCATCCGTCCATCAATCAAACTCTGCCGCCTTTCCGC
CCCCCTATCAACACCGAAAAACCCTCACACCCTATCCTACCACCCGTGCA
TCCACCCTCCTACCCCCCCCTCCCTGCCTCCCTTCCCCTCCCCCGGCCTC
AGGCGCCTCACCTCCCCCGACGCCCGTGTTCGTCTCCCAGCCGCCCGCGA
GTGGACCCGGTGGGAAATGGCCACCTCCCGACTAATCCCCGACCAGGTCG
TCATCAATAAGGTATGCCTCCTTCCCTCCCTCCCTCCCTCCCGACCAAAC
CGTCATTATGGGGAAAAAAAAAAAAAAGCGATGATAGGTGCTCTCCCTCC
CTGCCTCCCTCACATTCTCCCTTCCTCTATCAATCCCTCCCTCCCCTTGT
CAGCCCTTTGGCCATCCCGTGCTCTGTTCAAGTCCCGCAACTCACCTTCC
CTCTTTCCCCCTCTCTCAGGCCGACGACGACGATTTTTCCCTGGCCTTTG
CGCGCATCGAGAATCATTTCTTCATCAACCGAGGCTTTTTCCCTTACGAT
GACTGGATCCTCAAGTAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAA
GGAGGGAGGGAAGGAGGGTGGGAAGGAGGAAGGGAAGGAGGGAGAATTGA
AATCTCGACAGGATTTGTTTGCTTTTTACTTTTTGCCCTCGCACTCATCC
TCTTCCCTCCCTCCCTCCCTCCATCCATCCCTCCCTCCATCCCTCCCTCC
ATCCCTCCCTCCCGATTTTAGAAACGTCGACAAGATCCGTCACATCCCCA
CCGTCATCGTCCAGGGCCGGTGCGTTTCCTCCCTCCCTCCCTCCCCTCCC
TCCCTCCCTTCTTTCCGCCCACTCACTACCCCTCCCTCCCTCCCTCCCTC
CCTCCCCCCCTCCCTAGCTACGACTCGGTGTGTCCGATTCGCTCGGCCTG
GGATCTGTTCCGCGCCTTTCCCGAGAGCGACCTGGTCATTGTCCAAGGTA
CGCCCTCCCCCCCTCTCTCCCTCCCTCCCTCCCCCCCTCTCTCCCTCCCT
CCTCTCTCCCCTCTCTCCCTCTTCCTGCCTTTGGGGGCTCACGTGTATTG
AAGCCACTTGTCTTCCCTCCCTCCCTCCCTCCCTTTAGACGCAGGCCACG
CCTCGAGCGAGCCCGGCATCAGAAGCGAGTTAATCAAGGCATGTGACAGC
TTCGGGAAGGCGGGAGAGGGAGGGAGGGAGGAAGGGTTGAAGACGGGCCA
GTGAGGGAGGGCGGGAAGGAGGGCGGGAAGGGGGAAGTCTGGCCCCACAT
AGCACCAGAGCACGGACGACGATAGAGAGGGTAATGGGAACAGCCACAAC
GGCGTGGCGTAAGCATACAAGGAGATATATGTATACGGCAAAAGGGATAA
TAACCACAACGACAAGAAAAAGAAACGAAGCAAGCGAACAAGCGGCAGAT
ACGGAAGAAATGAAAACAGCCAAAATCCGATTAAATGGTAATTAGGAATG
TGTAGTGCGTTGTCGGCGCGTGGTGAAGAGGAAGTAGTTAGTAATGAGGG
CGGCAACGAAGAGGTTGAAAGAAAGTCAACCACTGAGGCACAAAAGAAAG
AAAATCAACGAGACAGAACGAAGAGGATCACGA back to topCoding sequence (CDS) from alignment at chr30:165938..169970- >NO30G00380.1 ID=NO30G00380.1|Name=NO30G00380.1|organism=Nannochloropsis oceanica|type=CDS|length=1719bp|location=Sequence derived from alignment at chr30:165938..169970- (Nannochloropsis oceanica) ATGCCCGTCATCCCCCTGTTGCAGCTTTTGCCATTGTCCACCATTAGCAC TAGTCAACTACACCGCCGTCTACCCCTCTTCGTGGCCATGCTCTTCCTTA CCTGTACCACCACGACTGCCACGGCCACTGCTGCCGCCACTCGAAGTCTG ATGAAGACCCTTAGTAGCAGCAAGAGCTGCGGTAGCAGGAGAGCCAACAC CAGCCTCCTCCTCCTCCTCCGCACCCGGGGAGGACAGACTGCCGCTGCGT TCTCTTGGTCTGGCGCTATTTGTGCTGCTGCTGGAGGTAGTAGGCGTGGT ACGGCAATATCCGCAACGACGAGGATGACTGCAACAACGGCGTCCCTCCT GACACGAGCTGGATTTGGTGGAAGAGGAGGAGGAGGTGGAGCAGAAGGAC AGAGACGTGGAAGGGTCAATACTGCTCTCGCATTTTCTTCCGCCACTTCC GCTGGTCATACCACCACTAGCTGTGTCAGCAGCAGCAGCAGCTGTGTGGG CAGGTCCTCCTCCTCTTCCTCCTCCTCCTCCACCTCGGCGCAGCAGCGGC AGGGGCACTTTCCTCTCTTTGCCTCGTACCTGGGTGCTGTCGCCCTCTAC TCTTCCTTTAACAATGGAGGGGAAAAAGGTGGGGAGGACAGCACCACCGC TGCGTGTGAAGCCGCGGCTTCTATACCGTCCAAGGAGGGAGGAAGGAAGC AGCCTCGCACCGTCACGGGGACTGAACCCCCTCCTAAAGAGCTCTACCCG CCTCTGCAGGCATTCCGCACCGGCATGCTCCCTGTTTCCGCGGTCCACAC GCTGTATTGGGAGGAGAGCGGGAACCCACAGGGGAAGCCGGTGGTGTTTC TGCACGGAGGTCCCGGCGGTGGCACAGCCCCCGACTTCCGCCGTTACTTC GACCCAGCCGTTTATCGCATTGTCATCTTCGATCAGCGGGGGTGCGGGAG GAGCACGCCGCATGCCAGCCTGGAAGAGAACACCACGTGGGACATGGTGG AGGATATTGAGAAGCTTCGCCTCCACCTGGGCATAGACAGGTGGACCGTC TTCGGGGGCTCCTGGGGGTCCACACTCTCCTTGACCTACGCCATCACGCA CCCTGAGCGTGTCACGGAGCTCGTCCTCCGCGGCATTTTCATGCTCCGAC ATAAAGAGCTCGCCTGGTACTATCAGGAGGGGGCCTCGTGGATCTACCCG GACGCCTTCGAGCCCTACCTCGAGCACATTCCAGAGGCTGAGCGTGGAGA CCTGATGCTTGCCTACAACAAGCGCCTCACCTCCCCCGACGCCCGTGTTC GTCTCCCAGCCGCCCGCGAGTGGACCCGGTGGGAAATGGCCACCTCCCGA CTAATCCCCGACCAGGTCGTCATCAATAAGGCCGACGACGACGATTTTTC CCTGGCCTTTGCGCGCATCGAGAATCATTTCTTCATCAACCGAGGCTTTT TCCCTTACGATGACTGGATCCTCAAAAACGTCGACAAGATCCGTCACATC CCCACCGTCATCGTCCAGGGCCGCTACGACTCGGTGTGTCCGATTCGCTC GGCCTGGGATCTGTTCCGCGCCTTTCCCGAGAGCGACCTGGTCATTGTCC AAGACGCAGGCCACGCCTCGAGCGAGCCCGGCATCAGAAGCGAGTTAATC AAGGCATGTGACAGCTTCGGGAAGGCGGGAGAGGGAGGGAGGGAGGAAGG GTTGAAGACGGGCCAGTGA back to top
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