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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr29 | genome | chr29:162893..167345 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO29G00410.1 ID=NO29G00410.1|Name=NO29G00410.1|organism=Nannochloropsis oceanica|type=mRNA|length=3699bp
GGAGGCGTTCTGAGCACGTCCTTGCAAGATATTTCTTCACAATAACATCT
TACTGAGAAAGCTGTCTAAGGTGTTTCCCACACCGCCACCGCCAGACATG
CACGCATTGAATTATTTGCTTCGTGTCTTGGTACTTGGTTTAATTTGTGG
CACAGTTTTAAGTCTTTGGGATCCACCAGGGAGGCTAGCAGCAGGGATCA
AGCAACCGACTTTTGATGGGCCACAGAGCTTGTTACGAAGGACCGGCCCA
CACTCATCCATCCCGCACATCGCCTCTTGCAGTCTCATGCCTTGGGCGTC
GCCTGCCAAACTTTCAGGCAGTTTTTTTGCACATGTCTATCTTTCTTGTG
TCTCCTGGTCATTGAAGCGGATCGGAGGGCGGCCCTGTGTCGCGGCACAC
GCTGGTGAAGTGGGAGAAAAGAAGGGCATGGCCATGCGAATGCTAGCATG
CACCACACGTCAGGATCCAACCCCTTGTGTCCCCTCCCTCGGGCTGTGCG
CCCACCAACCCAAGCTCACCTACCCAAACATATCTATTCTACTTACAGCT
TTGGTGGTTTGGTGCGTCCGCTGCACCTGCCTTTGCCAATCAACACTCAA
GCAGAAGAGCAACACAGGGGGAAGAGTCGAAAGAAAAAAGAAGTGATGCC
CGTCGCCGCTGTGAATGGCACTGGCTCCGCCCCCGGCGGAGGGGGGGGAG
GAGAAATGGACCCCGAACTCGCTCATGCTGAGGAGACGCTGCTGATGATG
AAGAAGGCTCCAGCCGCTGCCGCTGCTGCGGGCGCCGCCGGTCGGAAAGG
TGCTTTTCACATTCCTCCAATGACGCCCACCGGGGCTGCGTTTCAAGGAC
GTCGGGGAGGAGCAGGGGGGGAGTGGTGAGCAGTCGGACGGGACGGAAGC
CACGAGCGGCATCTGCAGGAGTTGCAGGTGCGACAGCTGCTGTTGCTGCT
GCAAATGCTGCTGCTGGTCTGACGGGAGAAAGGCGAGGAGGAGGAGGAGG
AGGAGGAGGAGGGATAGGAGGAGGAGGGAAGCGGAAGCGCAATGCGACCC
CGTCCGACTTGTGCCAGCGGTGTCAGATGGAGGGGCTGCAGCGGGGGATC
ACGCACTGGCATAAAGATGCGAGTCGAAGCACGGGTGGGATTTGCAAGGA
GCATGCCTTTGAGCTGCACAACGCGGACCCCCGTTCATTCGCCTCCTCTT
ACCGCATGCGTCACGGTCGGGCCTGCGAGCGCTGCGGCATTTTGCGGCGG
GCCACGCATGGTTATCTCGGTGAGGGGGTCTCGCGGTTCTGCGGCGAGTG
TGCAGGGACAGCTCGAGGGTGCATCGATTTGAATAATTTTAAATGCAAAC
TTCAAGGGTGTAACCGTATGGCCCGTTTCATTGGGGAGGAACCGCAAATT
TTTGGGGGGGGAGGAAGCGGCGGAGGAGGGCAGGGAGGAAGGGGGGGAGG
GCCGGGTCGACTGGTGTTCCGTTGCTGGGCCCATAAACAGCCCGAGATGA
AGGAGGCAGGGGAAGGGTGGAAGGAGTTCTATCGACTTTTTTGCCTGAGG
ACGGGAGCCACGGGCGTGGTGCCTGTACCTCCCATTCCTCCCCCTCCTCC
AAGTCCGTCGGTCCACGCAGCAGCGGTTGCAGTGGGGGGAGGGGGGGTTT
CGCTGGGCTTGCCTCTTGCTTCTCCCCTCCTTCCTATGGCAGGAGCGTTT
TTAGGGGCCGGGGGGAACGCCGAGGGTACCATTGTAAACATGAACGGAGG
CGGATTTGGAGGAGGAGATGGGGGAGGAGGGGGAGGGGAAGGAGGAGGGC
GAGGGGGAGCGTTTCCGCCGGGGGGTCTCCCGGGACCGAGGGTTGATGAA
GGGGAGAGTGGTGGGGAGGAAGAGGAGGAGGAGGAGGAAGGGAGGAGGGG
GGAGGAAGGGGGGGAGGGAGGGAGGGGAGGAGGGGAGGAGGAGGAAGAGA
TGGTGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGG
CAGGGAAAGGGGGAGGAAGGAAGAAGGGAAGTGGGGGCCGGCCACCCGCT
CACCGGGAGATTTAGAAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGATTA
CGATCTATCATCTTGCCATTAGTAACGTATCGGTGATATTTTTTGTTTAC
GATTTCAGATCTCTGTGTGTGTGTGTGTGTGTGTCTGTGCGTATATGTGG
GGATGAAAATGAAGGTGAAAAGAAGAAGGAAACGACGAAAAGGCAGAAGC
GGAAGCAACAGAAGCAGAAGCAGAAGATTAATATGAAGGTAAGAGAGTGA
ATGAATTAGTTATGCGTGGGTTGGAAAAGTGAGGGAGATATGCGGTGGAA
GGAGTGTGTGGATTATGCGACAAATGAGGAATGCGTCTATCAGAGAGACA
AGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAG
AGACCCAGAGAAGGAAAAAGTGAGTGAGTGAGTGAATGAGTGAGCGAGGA
AGACGACAAGGGAGAGTAAGTGTGTGTGTATCGAGGAAGCAACATAACAC
ATGCCTGTCTCCGGCCCAAGATTAAAGTGACTATAAGACTTCAAACATAT
CCATAAAAATAGGCGGTTGGAAGGAGGGCGAGAGAAGGAGGGTGGGGGGG
AAGGAAAAATGAAGGAAGGGAGGGAAACAGGGCAATGAATGACACCAAGG
AAGGGAGGGATTGCAGGAGCGAGTGAGGAGGAAGCAAATGCAGGAGAATC
ACCCTATACTATTGCTTATTATTTTCCTGCTAGGAACTCACTCGCCGGCT
GATTCTTTTGCGGACGGGTCCTTCTTCTTTGTCTCCTTCTGACTGAGAAG
ACACCCACGGGAAGGTACGGGAGAAGGAGGAGGACGAGGAGGTAAAAGGA
AAAAAGGGAGAAATGTGCGACAGCAAACAAGAAGCACCCAAAAATTAAAA
AAAAAAGATACGGTAAGATTAAGAAGATGACGGGAAAAGACAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAGGAGGAAGAAGTAGAAGG
TGGAGGAGAAGAAGAAGAAGGACTCCACTTTTCCCTTGCCCCCCTTCTAA
TGACAATCAATCGATGATCATAACGCTACGCAGAATGAGCCCCGGAAGCG
AGAGAGGACAGAGAGAGGGAAGAAAGAAGGAGAAGAAGAAGAAGTAAAGA
AGTAAGTGTGGTGTGTAGGGGGACGGGACGATGGCAAGTGGAAGGGCGGC
GGCAACAGGCGCGAGAGTGAGATAGATAGGGAGAGAGCGCGCGCAATAAG
CCGAGGGAGGCTGGGGGGAGAGGCCCCGGCAAAGGACTACAATGACAAGA
AAAAGAAGAAGAAGCAAAAGGAAAACGAAGTCGATGCCACGACCAAGAGT
AAAAGAGATAAAGCACGCATTGAACTCGATTTGATTTGCACTTTACTCAC
TCTTACCTTTATTAATACATTTTAAATCTAATGTTGGAGGCCTGTCTTTC
TTCACTCTCTTTTCTCATATTCCCCTTTCCTCATATTCCCATCAATCTGG
CGGTTGTTTCTCTCTTCGTAAAGAAGATGGGGTCCAAGAAATGAAGGCGA
GGGGAGAACAACCACCCAAAACTCTCTTCGAAAAGGAGAAGAGAGGGCGA
GGGGAACGGAGAGGATGACGTCCTTAAACATGAGCATGATGGAGGGATA back to topprotein sequence of NO29G00410.1 >NO29G00410.1-protein ID=NO29G00410.1-protein|Name=NO29G00410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=408bp
MEGLQRGITHWHKDASRSTGGICKEHAFELHNADPRSFASSYRMRHGRAC
ERCGILRRATHGYLGEGVSRFCGECAGTARGCIDLNNFKCKLQGCNRMAR
FIGEEPQIFGGGGSGGGGQGGRGGGPGRLVFRCWAHKQPEMKEAGEGWKE
FYRLFCLRTGATGVVPVPPIPPPPPSPSVHAAAVAVGGGGVSLGLPLASP
LLPMAGAFLGAGGNAEGTIVNMNGGGFGGGDGGGGGGEGGGRGGAFPPGG
LPGPRVDEGESGGEEEEEEEEGRRGEEGGEGGRGGGEEEEEMVMEEEEEE
EEEEEEGGQGKGEEGRREVGAGHPLTGRFRRREGGREGGRITIYHLAISN
VSVIFFVYDFRSLCVCVCVSVRICGDENEGEKKKETTKRQKRKQQKQKQK
INMKVRE* back to topmRNA from alignment at chr29:162893..167345+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO29G00410.1 ID=NO29G00410.1|Name=NO29G00410.1|organism=Nannochloropsis oceanica|type=mRNA|length=4453bp|location=Sequence derived from alignment at chr29:162893..167345+ (Nannochloropsis oceanica)
GGAGGCGTTCTGAGCACGTCCTTGCAAGATATTTCTTCACAATAACATCT
TACTGAGAAAGCTGTCTAAGGTGTTTCCCACACCGCCACCGCCAGACATG
CACGCATTGAATTATTTGCTTCGTGTCTTGGTACTTGGTTTAATTTGTGG
CACAGTTTTAAGTCTTTGGGATCCACCAGGGAGGCTAGCAGCAGGGATCA
AGCAACCGACTTTTGATGGGCCACAGAGCTTGTTACGAAGGACCGGCCCA
CACTCATCCATCCCGCACATCGCCTCTTGCAGTCTCATGCCTTGGGCGTC
GCCTGCCAAACTTTCAGGCAGTTTTTTTGCACATGTCTATCTTTCTTGTG
TCTCCTGGTCATTGAAGCGGATCGGAGGGCGGCCCTGTGTCGCGGCACAC
GCTGGTGAAGTGGGAGAAAAGAAGGGCATGGCCATGCGAATGCTAGCATG
CACCACACGTCAGGATCCAACCCCTTGTGTCCCCTCCCTCGGGCTGTGCG
CCCACCAACCCAAGCTCACCTACCCAAACATATCTATTCTACTTACAGCT
TTGGTGGTTTGGTGCGTCCGCTGCACCTGCCTTTGCCAATCAACACTCAA
GCAGAAGAGCAACACAGGGGGAAGAGTCGAAAGAAAAAAGAAGTGATGCC
CGTCGCCGCTGTGAATGGCACTGGCTCCGCCCCCGGCGGAGGGGGGGGAG
GAGAAATGGTACGTAACTTTTGGGCATCCTATGTGTATATCGCATGTGGC
CTGGGGGATTGGGATTGCTGGATGCGTTGCCTGAGTGTTGTGACCGGCCC
AGACAAGCATGGCCCGCCCGGCAAGCGCAGAAAAAATCTTTTCCCCCCCT
CATGGCCTCTTCACCGATGCCCGCAAGCCTAACGATGCCTTTGCGCCCAC
CAACCCACACTACATCTTCCCACCACATTTATGCATGTGTTTGAGTGCCC
CCTGTGGTTGTCACCGTGTCCAGGACCGCGGGAAAAAAATATTCATCCCT
GCCCATATATTCACTTACTGCTCCCTTCCTCCCTCCCTCCCTCCCACTGC
GCACAACCACACTGACCACCGACCAGTACTATACACTCACCTATATTTAT
TATTACACAACAAGCACGACAAGTAACTATTCCTTATTTTTACCTGTCGG
CCTCACTTCGCTTTCTCTTCTCTACCTCACCTTCAACACTACCTCCCTCC
ATCCCTCCCTCCTTTCCACTCTTCCCACAGGACCCCGAACTCGCTCATGC
TGAGGAGACGCTGCTGATGATGAAGAAGGCTCCAGCCGCTGCCGCTGCTG
CGGGCGCCGCCGGTCGGAAAGGTGCTTTTCACATTCCTCCAATGACGCCC
ACCGGGGCTGCGTTTCAAGGACGTCGGGGAGGAGCAGGGGGGGAGTGGTG
AGCAGTCGGACGGGACGGAAGCCACGAGCGGCATCTGCAGGAGTTGCAGG
TGCGACAGCTGCTGTTGCTGCTGCAAATGCTGCTGCTGGTCTGACGGGAG
AAAGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATAGGAGGAGGAGGG
AAGCGGAAGCGCAATGCGACCCCGTCCGACTTGTGCCAGCGGTGTCAGAT
GGAGGGGCTGCAGCGGGGGATCACGCACTGGCATAAAGATGCGAGTCGAA
GCACGGGTGGGATTTGCAAGGAGCATGCCTTTGAGGTAGGTCTCTCTCGT
TTTGGTTCGGAACTTCGTCCCTCCCTCCCTCCCTCCCTCTTTCCTTCACT
CCCTCCCTCCACCCCTCTTTCAGTTTAATTGCCTTCTGTCGCATACACGA
TGGGCGGGGCTGCGAAAGCTGCTGGAGCATCCTGCGTTATGCCACGCATG
GTTCCTCAGGAGAGCCAAAAACTGACTCTCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCAGCTGCACAACGCGGACCCCCGTTCATTCGCCTCC
TCTTACCGCATGCGTCACGGTCGGGCCTGCGAGCGCTGCGGCATTTTGCG
GCGGGCCACGCATGGTTATCTCGGTGAGGGGGTCTCGCGGTTCTGCGGCG
AGTGTGCAGGGACAGCTCGAGGGTGCATCGATTTGAATAATTTTAAATGC
AAACTTCAAGGGTGTAACCGTATGGCCCGTTTCATTGGGGAGGAACCGCA
AATTTTTGGGGGGGGAGGAAGCGGCGGAGGAGGGCAGGGAGGAAGGGGGG
GAGGGCCGGGTCGACTGGTGTTCCGTTGCTGGGCCCATAAACAGCCCGAG
ATGAAGGAGGCAGGGGAAGGGTGGAAGGAGTTCTATCGACTTTTTTGCCT
GAGGACGGGAGCCACGGGCGTGGTGCCTGTACCTCCCATTCCTCCCCCTC
CTCCAAGTCCGTCGGTCCACGCAGCAGCGGTTGCAGTGGGGGGAGGGGGG
GTTTCGCTGGGCTTGCCTCTTGCTTCTCCCCTCCTTCCTATGGCAGGAGC
GTTTTTAGGGGCCGGGGGGAACGCCGAGGGTACCATTGTAAACATGAACG
GAGGCGGATTTGGAGGAGGAGATGGGGGAGGAGGGGGAGGGGAAGGAGGA
GGGCGAGGGGGAGCGTTTCCGCCGGGGGGTCTCCCGGGACCGAGGGTTGA
TGAAGGGGAGAGTGGTGGGGAGGAAGAGGAGGAGGAGGAGGAAGGGAGGA
GGGGGGAGGAAGGGGGGGAGGGAGGGAGGGGAGGAGGGGAGGAGGAGGAA
GAGATGGTGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGG
GGGGCAGGGAAAGGGGGAGGAAGGAAGAAGGGAAGTGGGGGCCGGCCACC
CGCTCACCGGGAGATTTAGAAGAAGGGAGGGAGGGAGGGAGGGAGGGAGG
ATTACGATCTATCATCTTGCCATTAGTAACGTATCGGTGATATTTTTTGT
TTACGATTTCAGATCTCTGTGTGTGTGTGTGTGTGTGTCTGTGCGTATAT
GTGGGGATGAAAATGAAGGTGAAAAGAAGAAGGAAACGACGAAAAGGCAG
AAGCGGAAGCAACAGAAGCAGAAGCAGAAGATTAATATGAAGGTAAGAGA
GTGAATGAATTAGTTATGCGTGGGTTGGAAAAGTGAGGGAGATATGCGGT
GGAAGGAGTGTGTGGATTATGCGACAAATGAGGAATGCGTCTATCAGAGA
GACAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAG
AGAGAGACCCAGAGAAGGAAAAAGTGAGTGAGTGAGTGAATGAGTGAGCG
AGGAAGACGACAAGGGAGAGTAAGTGTGTGTGTATCGAGGAAGCAACATA
ACACATGCCTGTCTCCGGCCCAAGATTAAAGTGACTATAAGACTTCAAAC
ATATCCATAAAAATAGGCGGTTGGAAGGAGGGCGAGAGAAGGAGGGTGGG
GGGGAAGGAAAAATGAAGGAAGGGAGGGAAACAGGGCAATGAATGACACC
AAGGAAGGGAGGGATTGCAGGAGCGAGTGAGGAGGAAGCAAATGCAGGAG
AATCACCCTATACTATTGCTTATTATTTTCCTGCTAGGAACTCACTCGCC
GGCTGATTCTTTTGCGGACGGGTCCTTCTTCTTTGTCTCCTTCTGACTGA
GAAGACACCCACGGGAAGGTACGGGAGAAGGAGGAGGACGAGGAGGTAAA
AGGAAAAAAGGGAGAAATGTGCGACAGCAAACAAGAAGCACCCAAAAATT
AAAAAAAAAAGATACGGTAAGATTAAGAAGATGACGGGAAAAGACAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAGGAGGAAGAAGTAG
AAGGTGGAGGAGAAGAAGAAGAAGGACTCCACTTTTCCCTTGCCCCCCTT
CTAATGACAATCAATCGATGATCATAACGCTACGCAGAATGAGCCCCGGA
AGCGAGAGAGGACAGAGAGAGGGAAGAAAGAAGGAGAAGAAGAAGAAGTA
AAGAAGTAAGTGTGGTGTGTAGGGGGACGGGACGATGGCAAGTGGAAGGG
CGGCGGCAACAGGCGCGAGAGTGAGATAGATAGGGAGAGAGCGCGCGCAA
TAAGCCGAGGGAGGCTGGGGGGAGAGGCCCCGGCAAAGGACTACAATGAC
AAGAAAAAGAAGAAGAAGCAAAAGGAAAACGAAGTCGATGCCACGACCAA
GAGTAAAAGAGATAAAGCACGCATTGAACTCGATTTGATTTGCACTTTAC
TCACTCTTACCTTTATTAATACATTTTAAATCTAATGTTGGAGGCCTGTC
TTTCTTCACTCTCTTTTCTCATATTCCCCTTTCCTCATATTCCCATCAAT
CTGGCGGTTGTTTCTCTCTTCGTAAAGAAGATGGGGTCCAAGAAATGAAG
GCGAGGGGAGAACAACCACCCAAAACTCTCTTCGAAAAGGAGAAGAGAGG
GCGAGGGGAACGGAGAGGATGACGTCCTTAAACATGAGCATGATGGAGGG
ATA back to topCoding sequence (CDS) from alignment at chr29:162893..167345+ >NO29G00410.1 ID=NO29G00410.1|Name=NO29G00410.1|organism=Nannochloropsis oceanica|type=CDS|length=1224bp|location=Sequence derived from alignment at chr29:162893..167345+ (Nannochloropsis oceanica)
ATGGAGGGGCTGCAGCGGGGGATCACGCACTGGCATAAAGATGCGAGTCG
AAGCACGGGTGGGATTTGCAAGGAGCATGCCTTTGAGCTGCACAACGCGG
ACCCCCGTTCATTCGCCTCCTCTTACCGCATGCGTCACGGTCGGGCCTGC
GAGCGCTGCGGCATTTTGCGGCGGGCCACGCATGGTTATCTCGGTGAGGG
GGTCTCGCGGTTCTGCGGCGAGTGTGCAGGGACAGCTCGAGGGTGCATCG
ATTTGAATAATTTTAAATGCAAACTTCAAGGGTGTAACCGTATGGCCCGT
TTCATTGGGGAGGAACCGCAAATTTTTGGGGGGGGAGGAAGCGGCGGAGG
AGGGCAGGGAGGAAGGGGGGGAGGGCCGGGTCGACTGGTGTTCCGTTGCT
GGGCCCATAAACAGCCCGAGATGAAGGAGGCAGGGGAAGGGTGGAAGGAG
TTCTATCGACTTTTTTGCCTGAGGACGGGAGCCACGGGCGTGGTGCCTGT
ACCTCCCATTCCTCCCCCTCCTCCAAGTCCGTCGGTCCACGCAGCAGCGG
TTGCAGTGGGGGGAGGGGGGGTTTCGCTGGGCTTGCCTCTTGCTTCTCCC
CTCCTTCCTATGGCAGGAGCGTTTTTAGGGGCCGGGGGGAACGCCGAGGG
TACCATTGTAAACATGAACGGAGGCGGATTTGGAGGAGGAGATGGGGGAG
GAGGGGGAGGGGAAGGAGGAGGGCGAGGGGGAGCGTTTCCGCCGGGGGGT
CTCCCGGGACCGAGGGTTGATGAAGGGGAGAGTGGTGGGGAGGAAGAGGA
GGAGGAGGAGGAAGGGAGGAGGGGGGAGGAAGGGGGGGAGGGAGGGAGGG
GAGGAGGGGAGGAGGAGGAAGAGATGGTGATGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGGGGGGCAGGGAAAGGGGGAGGAAGGAAGAAG
GGAAGTGGGGGCCGGCCACCCGCTCACCGGGAGATTTAGAAGAAGGGAGG
GAGGGAGGGAGGGAGGGAGGATTACGATCTATCATCTTGCCATTAGTAAC
GTATCGGTGATATTTTTTGTTTACGATTTCAGATCTCTGTGTGTGTGTGT
GTGTGTGTCTGTGCGTATATGTGGGGATGAAAATGAAGGTGAAAAGAAGA
AGGAAACGACGAAAAGGCAGAAGCGGAAGCAACAGAAGCAGAAGCAGAAG
ATTAATATGAAGGTAAGAGAGTGA back to top
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