NO28G01600.1, NO28G01600.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO28G01600.1
Unique NameNO28G01600.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length426
Alignment locationchr28:506466..506971 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:506466..506971 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G01600.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G01600NO28G01600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO28G01600.1NO28G01600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO28G01600.1.cds1NO28G01600.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01600.1.cds2NO28G01600.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO28G01600.1 ID=NO28G01600.1|Name=NO28G01600.1|organism=Nannochloropsis oceanica|type=mRNA|length=426bp
ATGGTCCGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAAAAGG
AGAAACAAATAAGAAAAGAAAGGAAGAAAAAGGAAAAGTGAAGGGAGGGA
AGGAGGGGGGAGGAGGAGGAGGAGGAGGGGGGGGGGGGGAGGAGCAGCCG
CAACGGGAGGAAGGGGGAAAAGAGGAAGAGCCACAGCAGCAGCATGAAGA
GGTGGAGGGGGAGGAGGAGGGGGAAGTGGTGAAGGAAGAGGAGGAAGGAG
GGATTGAAGAGGAGGACGAGGAAGAGACTGGCTCACAGGAGGAGGCAGGG
AGGCAGGGAGGGAGGGAGGCGGGGAGGCCGCGGCGAGGGGCAATGAGCGT
GTTGTCTTACAAGGAACCGAGTCTAGCTGGGAGGATTCGGAGGGGGCATG
TCTTCTTCCCACAGGGGAGGAGGTAG
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protein sequence of NO28G01600.1

>NO28G01600.1-protein ID=NO28G01600.1-protein|Name=NO28G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=142bp
MVRGRGGGGGGGGGKKGETNKKRKEEKGKVKGGKEGGGGGGGGGGGEEQP
QREEGGKEEEPQQQHEEVEGEEEGEVVKEEEEGGIEEEDEEETGSQEEAG
RQGGREAGRPRRGAMSVLSYKEPSLAGRIRRGHVFFPQGRR*
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mRNA from alignment at chr28:506466..506971-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO28G01600.1 ID=NO28G01600.1|Name=NO28G01600.1|organism=Nannochloropsis oceanica|type=mRNA|length=506bp|location=Sequence derived from alignment at chr28:506466..506971- (Nannochloropsis oceanica)
ATGGTCCGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAAAAGG
AGAAACAAATAAGAAAAGAAAGGAAGAAAAAGGAAAAGTGAAGGGAGGGA
AGGAGGGTAGGGAGCAGTGTGGAAGATCGCCGAGAGGGAGGAAGACGAAA
GGGATGAAGAAGAAGAAGACGACGACGATGAAAAAGGGGGAGGAGGAGGA
GGAGGAGGGGGGGGGGGGGAGGAGCAGCCGCAACGGGAGGAAGGGGGAAA
AGAGGAAGAGCCACAGCAGCAGCATGAAGAGGTGGAGGGGGAGGAGGAGG
GGGAAGTGGTGAAGGAAGAGGAGGAAGGAGGGATTGAAGAGGAGGACGAG
GAAGAGACTGGCTCACAGGAGGAGGCAGGGAGGCAGGGAGGGAGGGAGGC
GGGGAGGCCGCGGCGAGGGGCAATGAGCGTGTTGTCTTACAAGGAACCGA
GTCTAGCTGGGAGGATTCGGAGGGGGCATGTCTTCTTCCCACAGGGGAGG
AGGTAG
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Coding sequence (CDS) from alignment at chr28:506466..506971-

>NO28G01600.1 ID=NO28G01600.1|Name=NO28G01600.1|organism=Nannochloropsis oceanica|type=CDS|length=426bp|location=Sequence derived from alignment at chr28:506466..506971- (Nannochloropsis oceanica)
ATGGTCCGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAAAAAAGG
AGAAACAAATAAGAAAAGAAAGGAAGAAAAAGGAAAAGTGAAGGGAGGGA
AGGAGGGGGGAGGAGGAGGAGGAGGAGGGGGGGGGGGGGAGGAGCAGCCG
CAACGGGAGGAAGGGGGAAAAGAGGAAGAGCCACAGCAGCAGCATGAAGA
GGTGGAGGGGGAGGAGGAGGGGGAAGTGGTGAAGGAAGAGGAGGAAGGAG
GGATTGAAGAGGAGGACGAGGAAGAGACTGGCTCACAGGAGGAGGCAGGG
AGGCAGGGAGGGAGGGAGGCGGGGAGGCCGCGGCGAGGGGCAATGAGCGT
GTTGTCTTACAAGGAACCGAGTCTAGCTGGGAGGATTCGGAGGGGGCATG
TCTTCTTCCCACAGGGGAGGAGGTAG
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Synonyms
Publications