NO28G01570.1, NO28G01570.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO28G01570.1
Unique NameNO28G01570.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length564
Alignment locationchr28:498579..499578 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:498579..499578 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G01570.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G01570NO28G01570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO28G01570.1NO28G01570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO28G01570.1.cds1NO28G01570.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01570.1.cds2NO28G01570.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01570.1.cds3NO28G01570.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01570.1.cds4NO28G01570.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO28G01570.1 ID=NO28G01570.1|Name=NO28G01570.1|organism=Nannochloropsis oceanica|type=mRNA|length=564bp
ATGCCTTATGACATCTGCGTGGAGGCCTGGCCAAGAGACATGCCAGTAAC
TGCAGGAGCGAGAGCAGCAGCCACGACAACAAGAGCAGCAGCAAGAGCAG
CAGCAAGAGCAGCAGCAGCAACAGCAAGATTGCAAGCACGAACAAGAGCT
ACAGCAGGAGAGCGGAGTGTGAAGCGGGTGGAGGAGGGAGGTGGCGGAGG
CCCCGAGGAGATCCCGGAAGAGGTCCAGGCCTTTATAAATGAGGAACGGC
GGCTTCTAAAGCTGGAGGGTTCCGCCCGTCTGGACATCAAGCGCCATTTC
ATGACGCTCCCCCACGACCGCCAGGAGCGTCTCGTACCACAAGCGATCAA
CCACTTGGAGGGGGATGTTCTGGTGAAGGAGATATGGAACGAGACTTTCC
GGGTGGGAAGCCCACGAAATCAGCGGGTGTTTCACATCCGGATTTCCACG
GATGATGTCTCGATGTCGGTCTACTTCCACGTGGTGAAAGAGAGACTGAA
GAAGGAGAAAGTGATTAAGGCCAAGTTGGAGAGGGAAGAGGAGGGGGAGG
AGATGCTAGAGTGA
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protein sequence of NO28G01570.1

>NO28G01570.1-protein ID=NO28G01570.1-protein|Name=NO28G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=188bp
MPYDICVEAWPRDMPVTAGARAAATTTRAAARAAARAAAATARLQARTRA
TAGERSVKRVEEGGGGGPEEIPEEVQAFINEERRLLKLEGSARLDIKRHF
MTLPHDRQERLVPQAINHLEGDVLVKEIWNETFRVGSPRNQRVFHIRIST
DDVSMSVYFHVVKERLKKEKVIKAKLEREEEGEEMLE*
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mRNA from alignment at chr28:498579..499578+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO28G01570.1 ID=NO28G01570.1|Name=NO28G01570.1|organism=Nannochloropsis oceanica|type=mRNA|length=1000bp|location=Sequence derived from alignment at chr28:498579..499578+ (Nannochloropsis oceanica)
ATGCCTTATGACATCTGCGTGGAGGCCTGGCCAAGAGACATGCCAGGTAA
GGAAAGGAAACGAGATGGGTCAGCTAACAAACACGAGGGGCCACAGGGCA
CGTGTTTATGGGCCAAAGGGCACATACCTTGTACTTAAAACAGTAACTGC
AGGAGCGAGAGCAGCAGCCACGACAACAAGAGCAGCAGCAAGAGCAGCAG
CAAGAGCAGCAGCAGCAACAGCAAGATTGCAAGCACGAACAAGAGCTACA
GCAGGAGAGCGGAGTGTGAAGCGGGTGGAGGAGGGAGGTGGCGGAGGCCC
CGAGGAGATCCCGGAAGAGGTCCAGGCCTTTATAAATGAGGAACGGCGGC
TTCTAAAGCTGGAGGGTTCCGCCCGTCTGGACGTGAACGAGCAGACCTCA
GTGGAAGGGCTCATTCTTCGTACCTGTACCACACATTTTACCAGTATCTA
TATATAAAAAGCATCAGGCGATCCTGGCGGTACAACAGGAGATGGAGGAT
AATTCTGGGATTTTTGCCGGGAACAGAGGGAATCCTGGCTATCGGGCATA
TACTATCGCTCCCGTCTCCAGATCAAGCGCCATTTCATGACGCTCCCCCA
CGACCGCCAGGAGCGTCTCGTACCACAAGCGATCAACCACTTGGAGGGGT
ATGTCGGCGCGAAATTCAAGCTCTTTATTATCTACTGAAGAATGTGGTGA
GACGTAGACCGAAATCGATGACGAGAAATGAATGGGACTAAGCATGCCCC
AATTGGTTGAGGCGTCTGGAAGGGAGGGGGTTTCGTAGAGTTTTGCAGGG
ATGTTCTGGTGAAGGAGATATGGAACGAGACTTTCCGGGTGGGAAGCCCA
CGAAATCAGCGGGTGTTTCACATCCGGATTTCCACGGATGATGTCTCGAT
GTCGGTCTACTTCCACGTGGTGAAAGAGAGACTGAAGAAGGAGAAAGTGA
TTAAGGCCAAGTTGGAGAGGGAAGAGGAGGGGGAGGAGATGCTAGAGTGA
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Coding sequence (CDS) from alignment at chr28:498579..499578+

>NO28G01570.1 ID=NO28G01570.1|Name=NO28G01570.1|organism=Nannochloropsis oceanica|type=CDS|length=564bp|location=Sequence derived from alignment at chr28:498579..499578+ (Nannochloropsis oceanica)
ATGCCTTATGACATCTGCGTGGAGGCCTGGCCAAGAGACATGCCAGTAAC
TGCAGGAGCGAGAGCAGCAGCCACGACAACAAGAGCAGCAGCAAGAGCAG
CAGCAAGAGCAGCAGCAGCAACAGCAAGATTGCAAGCACGAACAAGAGCT
ACAGCAGGAGAGCGGAGTGTGAAGCGGGTGGAGGAGGGAGGTGGCGGAGG
CCCCGAGGAGATCCCGGAAGAGGTCCAGGCCTTTATAAATGAGGAACGGC
GGCTTCTAAAGCTGGAGGGTTCCGCCCGTCTGGACATCAAGCGCCATTTC
ATGACGCTCCCCCACGACCGCCAGGAGCGTCTCGTACCACAAGCGATCAA
CCACTTGGAGGGGGATGTTCTGGTGAAGGAGATATGGAACGAGACTTTCC
GGGTGGGAAGCCCACGAAATCAGCGGGTGTTTCACATCCGGATTTCCACG
GATGATGTCTCGATGTCGGTCTACTTCCACGTGGTGAAAGAGAGACTGAA
GAAGGAGAAAGTGATTAAGGCCAAGTTGGAGAGGGAAGAGGAGGGGGAGG
AGATGCTAGAGTGA
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Synonyms
Publications