NO28G01430.1, NO28G01430.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO28G01430.1
Unique Name	NO28G01430.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2663
Alignment location	chr28:447765..453071 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr28	genome	chr28:447765..453071 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO28G01430.1 vs.
Match: EJK63225.1 (hypothetical protein THAOC_16131 [Thalassiosira oceanica])

HSP 1 Score: 452.2 bits (1162), Expect = 2.700e-123
Identity = 210/341 (61.58%), Postives = 262/341 (76.83%), Query Frame = 0

Query:  300 LSRMSPRVNRHIPVAPSRILDAPDLVDDYYLNLLSWSKHNILAVALGQAVYLWNADSGDIKHLLTLEGREDYVTALQWNETEANAHVIAVGTNGSQVQIHDTTSLTMTRVLTGHENRVGSLAWNGDLLSSGGRDAKILNYDLRMSHPRTRTLLGHQQEVCGLKWSPDGTTLASGGNENFLCLWDASMME----------SVTTTAPRLCLKEHQAAVKALAWCPFQRRLLASGGGTLDRTIKFWNTHTGSLLNSVDTGSQVCALLWSQHNKELVSSHGFSENQLCLWKYPSMAKIKELKGHTARVLHLDQSPDGMTVVSAAADETLRFWEIMGQPQDKQKQ 631
            L  ++  + R IP  PSRILDAP+LVDDYYLNL+SWS+ N+LAVALGQ VYLW A++G+IKHLLTL    D+VT++ W   + N+H IA+GTN + VQ+ D+ +    R L GH  RVG+++WN   LSSGGRD+ I+ +D+R  +    T +GH QEVCGLKW+ +GTTLASGGNEN LCLWDASM +            ++  PRL L +H+AAVKALAWCPF R LLASGGGT DRTIKFWNT++G++LNS+DTGSQVC++LWS+H +EL SSHGFSENQL LWKYP+M KI+E KGHTARVLH+DQSPDG  VVSAAADETLRFW++ G P  +QK+
Sbjct:  205 LKSVTKSIGRRIPKTPSRILDAPELVDDYYLNLVSWSESNVLAVALGQCVYLWEAETGNIKHLLTLHEDTDFVTSVSWVREKGNSHYIAIGTNHNMVQLWDSEAERRLRTLDGHSARVGAMSWNQHWLSSGGRDSLIVQHDVRSRNHVVSTYVGHTQEVCGLKWNDEGTTLASGGNENLLCLWDASMSQRRRNNGQRPFDSSSLGPRLALTQHKAAVKALAWCPFHRGLLASGGGTADRTIKFWNTNSGAVLNSIDTGSQVCSILWSKHQRELCSSHGFSENQLILWKYPTMTKIQEFKGHTARVLHMDQSPDGGCVVSAAADETLRFWDVFGSPPSEQKK 545

The following BLAST results are available for this feature:

BLAST of NO28G01430.1 vs.

BLAST of NO28G01430.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EJK63225.1	2.700e-123	61.58	hypothetical protein THAOC_16131 [Thalassiosira oc...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO28G01430	NO28G01430	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO28G01430.1	NO28G01430.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO28G01430.1.cds1	NO28G01430.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds2	NO28G01430.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds3	NO28G01430.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds4	NO28G01430.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds5	NO28G01430.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds6	NO28G01430.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds7	NO28G01430.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds8	NO28G01430.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds9	NO28G01430.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds10	NO28G01430.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds11	NO28G01430.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds12	NO28G01430.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds13	NO28G01430.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds14	NO28G01430.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds15	NO28G01430.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds16	NO28G01430.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G01430.1.cds17	NO28G01430.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr28:447765..453071+
coding sequence from alignment at chr28:447765..453071+

mRNA sequence

>NO28G01430.1 ID=NO28G01430.1|Name=NO28G01430.1|organism=Nannochloropsis oceanica|type=mRNA|length=2663bp
AAGGCACAGTGGCGCCTTCTTTGATGGACATGGATCAAGATAACGGTGGT
GGCGGGGGTGGAGGAGGACATCCCACAGCAGCAACTGCAGCAGCAACAGC
TCCTCCTGCTCCTCCTGCCCTACCACCTTTAGGGCCGGGGGGTGGCGCAC
CGCGGACGCCAGTGAAACGGCGGACTATAACTTCTTCGCCTATCTACTCG
CCTTCGTGGAGGTAGTCATAGGAGGAAGGGAGGGAGGGAGGGAGGAAAGG
AAGGAGAGAAGGTTGATTGAGAGTCGGTATGTGGCGGCATTACTTTCCCC
TTGCGTCCAAAGGGTAAAGAGGACATCATCGCATTCACCTTATTTCCATC
CTTCTTACCTCCTTCACTCTCATCTTCCTCCCCTCCTTCCCCAGTGGTGG
TGGAGGGGGCAACCGTCCTCCCTACAGCGCAGGAGGAAGAGGGGGAGGCA
GTGGGTATAAGCGGCGCAAGCCCTCCTCCCCTTCCTCCCCCTTTGCTTCC
TCTTCCTCCTCCTCTTTCTCCTCCTGCCCCGTTGCGGCAATTGCTGCTAG
CACCGCTGCTCTTCCTCCAACAAACTCTCCTGCACTTGGAAGACCATCCT
GCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCCTTCCTCCAGTAGT
CATCAGCAACGACGACACCCACTACCAGGAGGAGGCATGACGGTACATCA
TCAACAACAACAACAACAACAACAACAACAACAACAACAACCACAGCAGC
AACAGCAGCGGCAGCAGCAAAAACAGCAGCAGCACGGCCGCCATATGCCT
ACACCCACCCCTCCCCCCCTCCCTCCCCGCTCTCCCTCCCCTGCCAGTCT
CACGGTCGCGAGGCGGAGATCTCTGACGCCACAAAAACTGGGGTTTGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAAGTTCGTTGATGCGCGATCGGGAG
CATCTTTCGTCTTCCTCCCCTTCTCGCGCACTAGCTGCCACTGCTGGCGG
TTCTGCCGCTTCTTCCTCTTCCCCTTCCTCTTCCTCTTCCGGTTCCCCCG
GCGACAGATTTATCCCTTGTCGCGCTGGCATGGACATGAATCTGTCCCAC
TACTCCATTCTTCAAGCCAACGACGAGAACACTGAGCGACGGAAACACAT
GCGCCAGCCCAGCGTTCTGGTCGGCGGTGGGTTCACGCCCCTCAAGCCCG
AGTTTCACCGGACATTAAAATCAACGCTCCTCCACTCGTCCTCCTCCCCT
TCCTCCTTCTCCTCCTCCTCTGTCCGAGTCACCACCACCGCCAGCGGGGG
CACTCGGGCCGTACCCCTCGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGGAGGAGGAGATGGATGTAGTCCAGGACGGTCGATTGGGGTTGGGTGGT
GGGCGGGGAAGAGGGGGGGTGGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGGAGTGCGAAGAAGAGGGAAGAGAGCGTGCTTT
CTTTCAACGGGCCGGAAATGGGGGGAGGAGGGGGAGGGGTATACACGAGC
CCATTGAAGCTGTTTCATATGGATCCGGCGGACCTTTCGCGCATGTCGCC
CCGTGTCAACCGACACATCCCCGTCGCCCCCTCGCGGATTCTTGACGCCC
CAGATTTGGTGGATGACTACTACCTGAACCTCCTCTCCTGGAGCAAGCAC
AATATTTTGGCCGTTGCCCTAGGCCAAGCGGTCTACCTCTGGAACGCGGA
TTCAGGCGACATTAAACATCTCCTTACTCTCGAAGGACGTGAGGACTACG
TGACTGCTCTCCAATGGAACGAAACGGAGGCCAACGCCCACGTCATCGCG
GTGGGCACGAATGGATCCCAAGTCCAGATCCACGACACCACCAGCCTGAC
CATGACGCGGGTGTTGACGGGCCACGAAAACCGAGTGGGCTCCTTGGCAT
GGAACGGCGACTTGCTGAGTAGTGGAGGCAGGGATGCAAAGATTCTTAAT
TATGATTTGCGGATGTCTCATCCTCGGACTCGGACACTGCTGGGCCACCA
GCAGGAGGTTTGTGGCTTGAAATGGTCCCCGGATGGCACGACGCTGGCTT
CAGGCGGCAACGAGAATTTCCTCTGTCTCTGGGACGCGTCTATGATGGAA
AGTGTCACCACCACTGCTCCTCGTCTCTGTCTAAAGGAGCACCAAGCGGC
CGTGAAGGCCCTGGCCTGGTGCCCGTTCCAGCGTCGCCTCCTCGCCTCGG
GGGGAGGGACTCTCGATCGTACCATCAAGTTTTGGAACACCCACACAGGC
TCCCTCCTCAATAGCGTGGACACTGGCAGTCAGGTCTGTGCCTTGCTCTG
GTCCCAGCACAACAAGGAGCTCGTCTCCTCCCACGGCTTCTCGGAAAACC
AACTCTGCCTTTGGAAGTACCCCTCCATGGCCAAGATCAAGGAGCTCAAA
GGACACACGGCGCGAGTCCTCCACCTCGACCAGTCCCCGGACGGGATGAC
AGTTGTCTCAGCAGCCGCGGACGAGACCCTCCGGTTTTGGGAGATCATGG
GCCAGCCACAAGACAAGCAAAAGCAATTCGTCGGAAAAGGCATCTTGCTT
CCTCCTCTCAACACCATCAGCATGGCTCGCTCCTCATCTGGGACATTTGG
TGGAATCAGATAA

protein sequence of NO28G01430.1

>NO28G01430.1-protein ID=NO28G01430.1-protein|Name=NO28G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=659bp
MTVHHQQQQQQQQQQQQQPQQQQQRQQQKQQQHGRHMPTPTPPPLPPRSP
SPASLTVARRRSLTPQKLGFGGGGGGGGGGSSLMRDREHLSSSSPSRALA
ATAGGSAASSSSPSSSSSGSPGDRFIPCRAGMDMNLSHYSILQANDENTE
RRKHMRQPSVLVGGGFTPLKPEFHRTLKSTLLHSSSSPSSFSSSSVRVTT
TASGGTRAVPLGGGREGGREGGEEEMDVVQDGRLGLGGGRGRGGVGGGGG
GGGGGGGGGGGSAKKREESVLSFNGPEMGGGGGGVYTSPLKLFHMDPADL
SRMSPRVNRHIPVAPSRILDAPDLVDDYYLNLLSWSKHNILAVALGQAVY
LWNADSGDIKHLLTLEGREDYVTALQWNETEANAHVIAVGTNGSQVQIHD
TTSLTMTRVLTGHENRVGSLAWNGDLLSSGGRDAKILNYDLRMSHPRTRT
LLGHQQEVCGLKWSPDGTTLASGGNENFLCLWDASMMESVTTTAPRLCLK
EHQAAVKALAWCPFQRRLLASGGGTLDRTIKFWNTHTGSLLNSVDTGSQV
CALLWSQHNKELVSSHGFSENQLCLWKYPSMAKIKELKGHTARVLHLDQS
PDGMTVVSAAADETLRFWEIMGQPQDKQKQFVGKGILLPPLNTISMARSS
SGTFGGIR*

mRNA from alignment at chr28:447765..453071+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO28G01430.1 ID=NO28G01430.1|Name=NO28G01430.1|organism=Nannochloropsis oceanica|type=mRNA|length=5307bp|location=Sequence derived from alignment at chr28:447765..453071+ (Nannochloropsis oceanica)
AAGGCACAGTGGCGCCTTCTTTGATGGACATGGATCAAGATAACGGTGGT
GGCGGGGGTGGAGGAGGACATCCCACAGCAGCAACTGCAGCAGCAACAGC
TCCTCCTGCTCCTCCTGCCCTACCACCTTTAGGGCCGGGGGGTGGCGCAC
CGCGGACGCCAGTGAAACGGCGGACTATAACTTCTTCGCCTATCTACTCG
CCTTCGTGGAGGTAGTCATAGGAGGAAGGGAGGGAGGGAGGGAGGAAAGG
AAGGAGAGAAGGTTGATTGAGAGTCGGTATGTGGCGGCATTACTTTCCCC
TTGCGTCCAAAGGGTAAAGAGGACATCATCGCATTCACCTTATTTCCATC
CTTCTTACCTCCTTCACTCTCATCTTCCTCCCCTCCTTCCCCAGTGGTGG
TGGAGGGGGCAACCGTCCTCCCTACAGCGCAGGAGGAAGAGGGGGAGGCA
GTGGGTATAAGCGGCGCAAGCCCTCCTCCCCTTCCTCCCCCTTTGCTTCC
TCTTCCTCCTCCTCTTTCTCCTCCTGCCCCGTTGCGGCAATTGCTGCTAG
CACCGCTGCTCTTCCTCCAACAAACTCTCCTGCACTTGGAAGACCATCCT
GCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCCTTCCTCCAGTAGT
CATCAGCAACGACGACACCCACTACCAGGAGGAGGCATGACGGTACATCA
TCAACAACAACAACAACAACAACAACAACAACAACAACAACCACAGCAGC
AACAGCAGCGGCAGCAGCAAAAACAGCAGCAGCACGGCCGCCATATGCCT
ACACCCACCCCTCCCCCCCTCCCTCCCCGCTCTCCCTCCCCTGCCAGTCT
CACGGTCGCGAGGCGGAGATCTCTGACGCCACAAAAACTGGGGTTTGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAAGTTCGTTGATGGTACGGAGGGAG
GGAAGGGTGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGCGGGAGGCCATA
GTCTTGACCCTATTCCTCACTGTCACGTCCACTCAATTCTTCCTTCCCTC
TCTCCCTGATTCCCTCCTCTCTTCCTTCTCCATAGCGCGATCGGGAGCAT
CTTTCGTCTTCCTCCCCTTCTCGCGCACTAGCTGCCACTGCTGGCGGTTC
TGCCGCTTCTTCCTCTTCCCCTTCCTCTTCCTCTTCCGGTTCCCCCGGCG
ACAGATTTATCCCTTGTCGCGCTGGTAAGACCGTCCTCCCTCCCTCCCTT
CCTCCGTCCCTTCCTTCCTCCCTCCTTCCCTCCTTCCCGCTGCTTCACCG
ATCCCATCATTCCGACACCCCTCCCTCCCTCCCTCCCTCCCTTCCCAGGC
ATGGACATGAATCTGTCCCACTACTCCATTCTTCAAGCCAACGACGAGAA
CACTGAGCGACGGAAACACATGCGCCAGCCCAGCGTTCTGGGTATGCCCT
CCCTCCCTCCCTCCCTCCGCATCACTTCCGCATTCCCAAGCCCGTCATTC
TGACACCCACCCACGTCTCCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCC
TCCCTCCCTTCCCCCCCCCCAGTCGGCGGTGGGTTCACGCCCCTCAAGCC
CGAGTTTCACCGGACATTAAAATCAACGCTCCTCCACTCGTCCTCCTCCC
CTTCCTCCTTCTCCTCCTCCTCTGTCCGAGTCACCACCACCGCCAGCGGG
GGCACTCGGGCCGTACCCCTCGGAGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGGAGGAGGAGATGGATGTAGTCCAGGACGGTCGATTGGGGTTGGGTG
GTGGGCGGGGAAGAGGGGGGGTGGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGGAGTGCGAAGAAGAGGGAAGAGAGCGTGCT
TTCTTTCAACGGGCCGGAAATGGGGGGAGGAGGGGGAGGGGTATACACGA
GCCCATTGAAGGTGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGAGGTAA
AGGTCACCCTTGATAATCAGCCAAATAGCAGGCTCACATGCTCTTCTCTC
CAACCCCTCCCTCCCTCCCTCCCTCCCTCCAGCTGTTTCATATGGATCCG
GCGGACCTTTCGCGCATGTCGCCCCGTGTCAACCGACACATCCCCGTCGC
CCCCTCGCGGATTCTTGACGCCCCAGGTGGTAGCCCTCCCTCCCTCCCTC
CCTCCCCCCCTCCCTCCCTCCCTCCTTCCCTGATGGAACGAACAGGCTCA
TCCCCCCTCCCTCCCTCCCCCCCACAGATTTGGTGGATGACTACTACCTG
AACCTCCTCTCCTGGAGCAAGCACAATATTTTGGCCGTTGCCCTAGGTAC
GTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCTCATCATGTCCGCCGCCTCCAGCCCGA
TTTCTTCTGACCCCGACATTCTCTTACACTTCCTTCCCCCTCCAACCCTC
CCTTCTGACCCCCCCTCCCTCCCTCTCTCCCTCCTCCCTTCCTCCCTCCC
TCAGGCCAAGCGGTCTACCTCTGGAACGCGGATTCAGGCGACATTAAACA
TCTCCTTACTCTCGAAGGACGTGAGGACTACGTGACTGCTCTCCAATGGA
ACGAAACGGTACGCCCTTTCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCTTCCCTCCCTCGTTCTCTCCCAAGACTAGGACA
CGACACTTAAAGTGCTGATCGGCCCTCCCTCCCTCCCTCCCCCCCTCCGT
CCCTCCCTCAGGAGGCCAACGCCCACGTCATCGCGGTGGGCACGAATGGA
TCCCAAGTCCAGATCCACGACACCACCAGCCTGACCATGGTGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAAGAGAATTACTTTCTCTTTTTTTTTCTCG
TTTAGTTTTACACACACATATATACACAAACCCCATATATATCGGCAATA
TTTATTCTTTGTACACATCTATCTTCATTGTCCCACCACAGACGCGGGTG
TTGACGGGCCACGAAAACCGAGTGGGCTCCTTGGCATGGAACGGCGACTT
GCTGAGTAAGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGTCGTTTTTATG
TCTCAAGGATCTTCTCCATTCTCTTATTCCCGCCCCTCCTTCCCTTTTTC
CCTCCTTTCCCCTCCCTCCCTGCCTATTTTACAGGTAGTGGAGGCAGGGA
TGCAAAGATTCTTAATTATGATTTGCGGATGTCTCATCCTCGGACTCGGA
CACTGCTGGGCCACCAGCAGGAGGTCGGGGAGGGAGGGAGGGAGGGAAAG
AGGGAGGGAGGGAGAAGTGAAGGCATAATGTCGCCTCAGTATCAATTTAA
TATTAACTAATTTATGTGTCATATTACATGTAATATATGTATGTCATGTC
ATGTTTATATATTATACAGTATTTTCAAAAATATTACATATATATGTTTA
TATACATATTAATCCTCGTATATTCTCATGTTCCACTTTCAGGTTTGTGG
CTTGAAATGGTCCCCGGATGGCACGACGCTGGCTTCAGGCATGTGCTCCC
TCCCTCCCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTACCCTCCCTCACT
CTCTACCTCCAGTATTATTCACACCCCATTACTCCCTCTCGTTCCCTCCC
TCCCTCCCTCCCTCCCTCAGGCGGCAACGAGAATTTCCTCTGTCTCTGGG
ACGCGTCTATGATGGAAAGTGTCACCACCACTGCTCCTCGTCTCTGTCTA
AAGGAGCACCAAGCGGCCGTGAAGGCCCTGGCCTGGTGCCCGTTCCAGCG
GTACGTCCCCTCCCTCCCTCCTTTCTTTTGTTTACTTCTTCCTCCCTTGT
TCTTCAATCCTTCCCCTTCATGGACCCCCTCCCTTTCCCCCTACGCCGCC
ACCGCCACCACCATCATCGTGTCCATCCCCACAAGGCCGCCATTCTGACA
CTCATATCTCCTTTTTTTTCATTATCTCCTTGCCCCACCCCACTTTCCGC
CCTCTCTCCCTCCCTTCCTTCCTCCCTCAGTCGCCTCCTCGCCTCGGGGG
GAGGGACTCTCGATCGTACCATCAAGTTTTGGAACACCCACACAGGCTCC
CTCCTCAATAGCGTGGACACTGGCAGTCAGGTAGGCAAGCCAGCCCTCCC
TCCCTCCCTTTCTCCCTCCCTTCCATCTTTCCTTGCTTCCTCCTCTCTCT
GGCCAGCATGACCCGCACACAAATCGGTCTGTGAAAGTAGTCGTCTATTT
ATTGCCCTCAATCTAATCCTTATGTCATTATCACCACACAATGAATGATG
AGTCTACTCCCACGCAATACCAATCTTATTACATTACACGCGGTACCAAT
TACATTACATTACACGCCGTGCCAATCTAATTACATTACTCTTCATTTCG
CGACAGGTCTGTGCCTTGCTCTGGTCCCAGCACAACAAGGAGCTCGTCTC
CTCCCACGGCTTCTCGGAAAACCAACTCTGGTATGTCCCCTCCCTCCCTC
CCTCCCTCCCCCCCTCCCTTCTCATGTCACACCCTTTTTAATGCCCCTAC
ACGATGATGTTTGCTTTTTCTGACCCTCCCTCATTCCCTCCCTCCCTCCT
TCCCTCCCACCCTCCCCCAGCCTTTGGAAGTACCCCTCCATGGCCAAGAT
CAAGGAGCTCAAAGGACACACGGCGCGAGTCCTCCACCTCGACCAGGTAC
AGAGCGCCCTCCTTCTCTCCCTCCCTCCCTCCCTCCCTCTATCCCTCCCT
CTATCCCTCCCTCTTGTCCTCCCTGCTTCCCCCCTTCTGTATGTCGCAGA
GATACTGGTGAGTCCTCGTACCGTCGACCTCCCCTCCCTCCCCTCCCTCC
CCTCCCTCCTCGACCTACTGCAGTCCAGCACATTTCTGCCCATACTCACG
GACTAACCCTCCCCTCTCTCCCTGCATCCCTCAGTCCCCGGACGGGATGA
CAGTTGTCTCAGCAGCCGCGGACGAGACCCTCCGGTTTTGGGAGATCATG
GGCCAGCCACAAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGAAAA
GCCAGGAGGGTGTTGGGCTTGCCATATCCGCTCACTTCACTTTTTCATGT
CGCTATTTATCATTCATGTATTTATCGATCTCTCCTTTCCACCATCTTTT
CCTCAGACAAGCAAAAGCAATTCGTCGGAAAAGGCATCTTGCTTCCTCCT
CTCAACACCATCAGCATGGCTCGCTCCTCATCTGGGACATTTGGTGGAAT
CAGATAA

Coding sequence (CDS) from alignment at chr28:447765..453071+

>NO28G01430.1 ID=NO28G01430.1|Name=NO28G01430.1|organism=Nannochloropsis oceanica|type=CDS|length=1977bp|location=Sequence derived from alignment at chr28:447765..453071+ (Nannochloropsis oceanica)
ATGACGGTACATCATCAACAACAACAACAACAACAACAACAACAACAACA
ACAACCACAGCAGCAACAGCAGCGGCAGCAGCAAAAACAGCAGCAGCACG
GCCGCCATATGCCTACACCCACCCCTCCCCCCCTCCCTCCCCGCTCTCCC
TCCCCTGCCAGTCTCACGGTCGCGAGGCGGAGATCTCTGACGCCACAAAA
ACTGGGGTTTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTTCGTTGA
TGCGCGATCGGGAGCATCTTTCGTCTTCCTCCCCTTCTCGCGCACTAGCT
GCCACTGCTGGCGGTTCTGCCGCTTCTTCCTCTTCCCCTTCCTCTTCCTC
TTCCGGTTCCCCCGGCGACAGATTTATCCCTTGTCGCGCTGGCATGGACA
TGAATCTGTCCCACTACTCCATTCTTCAAGCCAACGACGAGAACACTGAG
CGACGGAAACACATGCGCCAGCCCAGCGTTCTGGTCGGCGGTGGGTTCAC
GCCCCTCAAGCCCGAGTTTCACCGGACATTAAAATCAACGCTCCTCCACT
CGTCCTCCTCCCCTTCCTCCTTCTCCTCCTCCTCTGTCCGAGTCACCACC
ACCGCCAGCGGGGGCACTCGGGCCGTACCCCTCGGAGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGGAGGAGGAGATGGATGTAGTCCAGGACGGTCGAT
TGGGGTTGGGTGGTGGGCGGGGAAGAGGGGGGGTGGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGTGCGAAGAAGAGGGA
AGAGAGCGTGCTTTCTTTCAACGGGCCGGAAATGGGGGGAGGAGGGGGAG
GGGTATACACGAGCCCATTGAAGCTGTTTCATATGGATCCGGCGGACCTT
TCGCGCATGTCGCCCCGTGTCAACCGACACATCCCCGTCGCCCCCTCGCG
GATTCTTGACGCCCCAGATTTGGTGGATGACTACTACCTGAACCTCCTCT
CCTGGAGCAAGCACAATATTTTGGCCGTTGCCCTAGGCCAAGCGGTCTAC
CTCTGGAACGCGGATTCAGGCGACATTAAACATCTCCTTACTCTCGAAGG
ACGTGAGGACTACGTGACTGCTCTCCAATGGAACGAAACGGAGGCCAACG
CCCACGTCATCGCGGTGGGCACGAATGGATCCCAAGTCCAGATCCACGAC
ACCACCAGCCTGACCATGACGCGGGTGTTGACGGGCCACGAAAACCGAGT
GGGCTCCTTGGCATGGAACGGCGACTTGCTGAGTAGTGGAGGCAGGGATG
CAAAGATTCTTAATTATGATTTGCGGATGTCTCATCCTCGGACTCGGACA
CTGCTGGGCCACCAGCAGGAGGTTTGTGGCTTGAAATGGTCCCCGGATGG
CACGACGCTGGCTTCAGGCGGCAACGAGAATTTCCTCTGTCTCTGGGACG
CGTCTATGATGGAAAGTGTCACCACCACTGCTCCTCGTCTCTGTCTAAAG
GAGCACCAAGCGGCCGTGAAGGCCCTGGCCTGGTGCCCGTTCCAGCGTCG
CCTCCTCGCCTCGGGGGGAGGGACTCTCGATCGTACCATCAAGTTTTGGA
ACACCCACACAGGCTCCCTCCTCAATAGCGTGGACACTGGCAGTCAGGTC
TGTGCCTTGCTCTGGTCCCAGCACAACAAGGAGCTCGTCTCCTCCCACGG
CTTCTCGGAAAACCAACTCTGCCTTTGGAAGTACCCCTCCATGGCCAAGA
TCAAGGAGCTCAAAGGACACACGGCGCGAGTCCTCCACCTCGACCAGTCC
CCGGACGGGATGACAGTTGTCTCAGCAGCCGCGGACGAGACCCTCCGGTT
TTGGGAGATCATGGGCCAGCCACAAGACAAGCAAAAGCAATTCGTCGGAA
AAGGCATCTTGCTTCCTCCTCTCAACACCATCAGCATGGCTCGCTCCTCA
TCTGGGACATTTGGTGGAATCAGATAA

Synonyms

Publications