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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr28 | genome | chr28:312642..317824 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO28G00980.1 vs.
Match: EWM20904.1 (atp-dependent rna helicase dhx57 [Nannochloropsis gaditana]) HSP 1 Score: 1490.7 bits (3858), Expect = 0.000e+0 Identity = 858/1369 (62.67%), Postives = 1004/1369 (73.34%), Query Frame = 0
Query: 31 SVASSQQSMAGSSTSSSNSTSSTSRPPPPPPPHPPYQPASSRPSGKTSKNGSKGIRDTHGPSAISEAMRISFSTQLNQLREDPSKEELSFPPTLDNIHRKFLHALAGQLGLVSKSSGKGDGKRFITVKKKKKGRNCGEEDGEEEDITRHPPFQPGRESLELLRGHVTKHPLSKREYESLLKLCVSRSVTLAAAAAAAA--AAEEGGKNGGGGHRAAVRAAE-KQQGPRTTSSSLTATAAIASNSKNTARNQGKKQQGYYDPAAQEQLLIKRKEGHAAAQAKKEANRKYQAMLTARKALPAWQHSSLVVDLIKTHQVVIVSGETGCGKSTQVPQFLLDDEAIGPTLKMAVTQPRRISAISVAERVASERMEEVGKTVGYHIRQESEFSEGSQVVFMTPGVLLRMLMGDPELREFNVVMIDEVHERDKNTDFLLIILRDLLLRHRSSDLRLILMSATLQTGKLSAYFGGCPVATIGSTCYPVQEFYLEDVLLQTRYLQKLGLVKDGSSGS--------SNSKSGSSKKAFGTAGKGGGQGDNALLRALCQATPVYACEMCGQKGFRSPEEYGTHIVLCDGVVIEVEDEGEDEGMREGGFQALEEQLLRDLEGQGKEGYVPEYEDWGETPARINSSGPLAALARGEEG--GFISTVEDVGEGEEVM------REPHRHSALE-----CPIPAATEVQGQEALRAYQYAFDDELVDYDLIQSLLVYIVESGYRPGAILVFLPGWDDISRLRDALRRDPVLGRADKFLLLPLHSGIPSQQQREVFKSPPAGVRKIVLATNIAETSVTIDDIVFVVDSCRVKEKNYDPFLKLCTLQPTWISKASARQRRGRAGRTMAGVCFHLCSRRRYESLKEFKESELLTTPLEELCLQAKLLGLAPGYDPFERHVVSGIGGGKKKKKKKKTAAAHVLLASLAL-DVEEEEGEEEEEKEDREISRLKASRLEGDSIMSFLGKALDAPHDLSVKNAIDLLVQIGALTAREQLTDLGHKLARLPLDPRIGKMVLWGQLLGCGRTALKVGCALAYRDPFVLPLTADGKAKAATAKMDLAGGTMSDHLALLGALSGFESAAERGGAQASSGYCDRYFLSKSTLTTVVDVVKQVGNELAGMGFENPLFWSSNSSESKISPVVEHDRNLALLTAVVCAGLYPSVASRTVGDVNFTTTCQKKAKLHQSSVNYHPGSRFTRASTAEAHRAMGGGPEFLVFSEVVRTPSIFVISNTTPVPVVSLFLMCGDLKVRGMKGLLSGEKGRQEVGGEEAEGEEAEG-----EEEGEEEVE--EEDDDGEGNLGEQALLLLDDWITFRCPKEVALQLLALRLRLQDAFLVFVKHPQARLSETCQDALRSAVRLLTLEN 1368
S S + G SNST S H +PA S K R+++ SAISE RISF+TQLN+LRED S +E+SFPPTLD RK+LHALA QLGL SKS GKG+G+RFITV KK K G+E ++ED+ R+PPF +ESL LLR H+ +H + +E E+LL+ C+SRS + A A A E G+ G AVR A+ + GP T A + T ++ KKQQ YDPA +E+ L++R HA QA+++ + +Y +ML AR LPA +H++LV L+KTH VV+VSGETGCGKSTQVPQF+LDD +GP+LKMAVTQPRRISA++VAERVA+ERME VG+T+GY+IR ESE SE SQVVFMTPGVLLR L GD ELREFNV+MIDEVHERD+NTDFLLIILRDLL R +DLRLILMSATLQT KLSAYF GCPVATIGSTCYPV+EFYLED LLQT YL+KLGL K G+ G K S++ G +G++ LLR LC+A VY CEMCGQ+GFRSPEE+GTH+VLCDG + G E G++ALE +LL LEG+ + +VP+YEDW ETP ++ + AALA+ + GF+S VED GEGEE+ R P+RH A E P+P TEVQ QEALRAYQYAFDDE VDYDLI LL YI +SGY PGAILVFLPGWDDISRLRDALR+DP G A K +LPLHSG+PSQQQREVFKSPP GVRK+VLATNIAETSVTIDD+VFVVDS RVKEK YDPFLKLCTLQPTWISKASARQRRGRAGR AGVCFHLCSRRR+ESLKEFKESELLTTPLEELCLQAKLLGLAPG+DP+ER K K K A LLA+L+L D E EE ++D +ISRL+ASRLEGDSIM FLGKALDAPHDLS+KNAIDLL+QIGA TA+EQLTDLG LARLP+DPRIGKMVLWGQ+LGCG ALKV CALAYRDPFVLPLTA+ K KA AK +LA GTMSDHLALL AL G+E+A RGG QA+ GYCDRYFLS+STL+T +DV KQ+ EL MGF+ LF SN+ E +P +LALLTAV+CAGLYP VA R VG+VNFTT+CQKKAKLHQSSVNYHPGSRFTR ST E+HRA+GGGPEFLVFSEVVRTPSIFVISNTTPVPV+S+FL+CGD KVRG++ LL G+ G + GE+A + G + EG VE E D+D E LG++ALLL+D+W+TFRCPKEVAL L LRLRL++AFL F+KHPQ RLS QDAL+ AVRL LEN
Sbjct: 10 SGTSKSSDLKGQENGRSNSTPDVSYTNGSA--HLVQEPAVM--SFPKKKQAPASTRNSYACSAISEETRISFTTQLNELREDSSLQEISFPPTLDKTQRKYLHALAEQLGLTSKSRGKGEGERFITVSKKPKKGPHGDE--QDEDLDRYPPFHLKKESLGLLRRHLARHAVRSQEREALLQQCISRSASSEATNTCAGNPTAVERGRGG------AVRVADLRDPGP-------TPGGRAAVPATQTGQSLSKKQQRLYDPAMEEERLVRRCAEHAEKQARRDRHPRYASMLQARGRLPAAEHAALVTRLVKTHPVVVVSGETGCGKSTQVPQFMLDDPDVGPSLKMAVTQPRRISAVAVAERVAAERMEAVGQTIGYNIRLESEVSEQSQVVFMTPGVLLRKLGGDRELREFNVIMIDEVHERDRNTDFLLIILRDLLRYQRPTDLRLILMSATLQTEKLSAYFNGCPVATIGSTCYPVREFYLEDALLQTSYLEKLGLGK-GAGGDRAGQPPEQGQGKEEGSQRLGGRERAAKPRGEDPLLRTLCEAKAVYTCEMCGQRGFRSPEEFGTHVVLCDGAPVG----GAGEEGAGHGYEALEAKLLEGLEGE--DDFVPDYEDWTETPGQLGPADLSAALAKDVDAPEGFVSAVEDPGEGEELGCEGGGGRPPYRHRASEGEGVLFPMPGLTEVQAQEALRAYQYAFDDENVDYDLILQLLHYIDKSGYGPGAILVFLPGWDDISRLRDALRQDPDFGNAKKAWVLPLHSGVPSQQQREVFKSPPPGVRKVVLATNIAETSVTIDDVVFVVDSGRVKEKTYDPFLKLCTLQPTWISKASARQRRGRAGRVRAGVCFHLCSRRRFESLKEFKESELLTTPLEELCLQAKLLGLAPGFDPYERQAPPA-------KSKTKPAMNPELLAALSLEDGEGCTAEENGAEKDPDISRLEASRLEGDSIMRFLGKALDAPHDLSIKNAIDLLMQIGAFTAQEQLTDLGMTLARLPMDPRIGKMVLWGQMLGCGGAALKVACALAYRDPFVLPLTAEMKVKAKKAKQELAVGTMSDHLALLSALQGYEAALARGGQQAAFGYCDRYFLSRSTLSTALDVAKQMVRELVAMGFDASLF--SNAREGSSAP------SLALLTAVLCAGLYPGVACRRVGEVNFTTSCQKKAKLHQSSVNYHPGSRFTRVSTPESHRALGGGPEFLVFSEVVRTPSIFVISNTTPVPVLSVFLLCGDSKVRGIRTLLEGQSGVRR--GEDATARKQSGGSLVQDNEGATGVEETENDEDDEAGLGDEALLLIDEWMTFRCPKEVALHLQVLRLRLEEAFLAFLKHPQGRLSSATQDALQVAVRLFALEN 1335
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO28G00980.1 ID=NO28G00980.1|Name=NO28G00980.1|organism=Nannochloropsis oceanica|type=mRNA|length=5012bp
GTAAACTTTTGCTTGGCATGTTGGGGACGTACGGGTTGGGAGATGTGTAT
ACACATTTAAAGCCGAAATCTCGGCAAGATGCATGCACAGGTGCTCGAAA
AACCTTACGGCACCCCTTCCATGCTGTCTGCATCGCGGTTCATGCTTGGA
TTGGAAAGTCCGGAAAACAAGTCATTAAGTCAGTCGTATTATGACATACA
ACTGTGGTCAGAAACGGCAAGCGCGATGACGACGACGACGTTTATTCCTT
GCCAGTGGTGCGTCTTCCACCGGCGCGACACACAACCGGGACTTCACAAC
CTCTATCTTTCTCCTCTTCCACAACATGTAGCTGCGGTGCGGAGGGGCCT
CCTAACGGAGACTGAAGAAAGACTGACACGGCGAGACCAGCACAACCGAT
TTCCCGCAGCAGTGTTCCGTGGCCGATCAAACGAAGGAGTAAGGCATGAC
GCGCAGAGGACGAGGACAGGGTAGAGGTGGTGGCGGACGAGGTGATGGTG
AAAGCAGTAACAGGTTTGGAGAAGGAGGCGGCAGCAGCGTGGCGAGCAGT
CAACAAAGCATGGCAGGCAGCAGCACCAGCAGCAGCAACAGCACCAGCAG
CACCAGCAGACCACCTCCCCCTCCTCCTCCACATCCACCTTACCAACCAG
CTTCCAGCCGCCCGTCCGGTAAAACAAGCAAAAATGGGAGCAAAGGCATA
CGCGATACTCATGGACCTAGTGCGATATCGGAGGCGATGCGAATTTCGTT
TTCGACGCAGTTGAACCAGTTGCGTGAGGACCCGAGTAAGGAGGAGCTTT
CTTTCCCTCCTACCCTCGATAACATCCACAGAAAGTTCCTTCATGCATTA
GCTGGGCAGCTTGGTTTGGTATCTAAAAGCAGCGGGAAAGGAGATGGGAA
GCGCTTTATCACTGTAAAGAAGAAGAAGAAGGGTAGGAATTGCGGGGAGG
AGGATGGGGAGGAAGAGGACATTACGCGGCATCCACCCTTCCAGCCGGGG
AGGGAATCTTTGGAGCTTCTAAGAGGGCACGTGACTAAGCATCCACTTAG
TAAACGAGAGTATGAATCGCTTTTGAAGCTGTGTGTGTCACGTTCCGTAA
CGCTGGCGGCAGCGGCAGCAGCAGCGGCAGCAGCAGAAGAGGGGGGTAAG
AATGGAGGAGGGGGGCATCGGGCAGCAGTGCGTGCAGCAGAGAAGCAGCA
AGGACCACGAACAACCTCATCCTCCCTTACAGCCACTGCGGCCATCGCGA
GTAACAGCAAGAATACGGCGAGGAATCAAGGCAAGAAGCAACAAGGTTAC
TACGACCCCGCAGCCCAAGAGCAGCTGCTGATCAAGCGAAAGGAAGGCCA
CGCAGCGGCCCAAGCCAAAAAGGAAGCCAACCGTAAATACCAAGCCATGC
TGACCGCGCGTAAGGCTCTTCCAGCCTGGCAGCATTCCTCCCTCGTTGTG
GATTTGATTAAGACTCACCAGGTGGTGATCGTGTCCGGTGAGACGGGCTG
TGGGAAATCCACGCAAGTCCCTCAATTCCTCCTCGATGATGAAGCGATAG
GACCTACGCTCAAGATGGCCGTGACGCAACCCAGGAGGATCAGTGCCATT
TCCGTCGCAGAACGGGTGGCGAGTGAACGAATGGAGGAGGTGGGGAAAAC
GGTAGGGTACCACATTCGCCAGGAGAGCGAGTTCTCGGAGGGGAGCCAGG
TGGTGTTTATGACCCCGGGGGTGCTGCTGCGGATGTTAATGGGCGATCCA
GAATTGAGGGAGTTCAATGTGGTGATGATTGATGAGGTGCACGAACGTGA
CAAGAACACGGACTTCCTGCTCATCATCCTCCGCGACCTGCTGCTGCGCC
ACCGTTCCTCCGACCTCCGCCTCATCCTCATGTCGGCTACGCTTCAAACG
GGCAAGCTCTCTGCTTACTTTGGGGGGTGTCCAGTGGCCACTATTGGCTC
GACCTGCTACCCTGTCCAAGAGTTCTACCTGGAAGATGTGCTCTTACAAA
CCCGGTACTTGCAGAAACTCGGTTTGGTGAAGGACGGCAGCAGCGGCAGT
AGCAACAGCAAGAGTGGCAGCAGTAAGAAGGCCTTCGGGACGGCGGGAAA
GGGAGGGGGACAAGGAGACAACGCCTTGCTGCGTGCTTTGTGTCAGGCGA
CGCCTGTGTATGCGTGTGAGATGTGCGGGCAGAAGGGATTTCGTTCCCCG
GAGGAATACGGGACGCATATAGTCTTGTGTGACGGTGTTGTGATCGAGGT
GGAGGACGAGGGGGAAGACGAGGGAATGAGGGAGGGAGGGTTCCAGGCAT
TGGAAGAACAGTTGTTGCGGGACTTGGAGGGGCAGGGAAAGGAAGGGTAC
GTGCCTGAATACGAAGATTGGGGAGAGACACCTGCACGTATCAATAGTAG
TGGTCCTTTGGCTGCTTTGGCCAGAGGAGAAGAAGGAGGATTTATTTCGA
CTGTGGAGGATGTGGGGGAGGGGGAGGAAGTGATGAGAGAGCCGCACAGG
CATAGTGCTTTGGAGTGCCCGATACCGGCGGCGACGGAGGTGCAGGGACA
GGAGGCATTGAGGGCATATCAGTACGCGTTTGATGATGAGCTGGTTGACT
ATGACTTGATCCAGTCGTTGCTAGTATACATTGTGGAGTCCGGGTATCGT
CCTGGAGCGATTTTGGTGTTTTTGCCGGGATGGGATGATATAAGTCGGCT
GCGCGATGCCTTGAGACGAGATCCCGTCCTGGGCCGTGCGGACAAATTCT
TGCTGTTGCCGCTGCATTCGGGTATTCCCTCGCAGCAGCAGCGGGAGGTT
TTCAAGAGTCCACCGGCGGGGGTCCGGAAGATTGTCCTTGCGACTAACAT
TGCCGAGACCTCGGTGACCATTGATGATATCGTGTTTGTCGTGGATAGCT
GCAGGGTGAAGGAAAAAAATTACGATCCTTTCCTGAAACTGTGTACGTTG
CAGCCGACATGGATCAGTAAGGCGAGTGCGCGGCAGAGGAGAGGGCGGGC
CGGACGGACAATGGCGGGGGTATGTTTTCACTTGTGTTCGCGAAGGAGGT
ACGAGAGTTTGAAGGAGTTTAAGGAGTCGGAGTTGTTGACGACGCCATTG
GAAGAGTTGTGTTTGCAGGCAAAGTTGCTTGGATTGGCTCCGGGCTATGA
CCCCTTCGAGCGACACGTGGTTTCTGGTATTGGTGGTGGGAAGAAGAAGA
AGAAGAAGAAGAAGACTGCGGCGGCGCACGTGCTGTTGGCATCATTGGCA
TTAGATGTGGAAGAAGAAGAAGGGGAGGAGGAAGAGGAAAAAGAGGATAG
GGAGATATCACGGTTGAAGGCCTCAAGGTTGGAGGGGGATTCAATTATGT
CTTTCTTAGGGAAAGCTCTAGATGCCCCCCATGACTTATCAGTCAAAAAT
GCCATCGACCTCCTCGTTCAAATCGGCGCCCTCACCGCCCGTGAGCAACT
TACGGACTTGGGACACAAGCTCGCGCGCCTTCCTCTGGATCCACGTATCG
GTAAAATGGTCCTGTGGGGTCAACTTTTGGGATGTGGGCGGACCGCGCTG
AAGGTGGGGTGCGCGCTCGCGTATCGCGATCCGTTCGTCTTGCCGTTGAC
AGCGGATGGGAAGGCGAAAGCAGCGACAGCAAAGATGGATTTGGCGGGGG
GGACGATGAGTGACCATTTGGCGCTGTTAGGAGCGCTGAGTGGGTTTGAG
TCTGCGGCGGAGAGAGGAGGGGCGCAAGCGTCCTCTGGGTATTGCGATCG
GTACTTCCTGTCGAAGTCAACCTTGACCACAGTGGTAGATGTGGTGAAGC
AGGTGGGCAATGAGTTAGCAGGGATGGGCTTCGAAAATCCCCTTTTCTGG
AGCAGTAACAGTAGCGAGAGCAAGATAAGCCCAGTCGTCGAACACGACCG
CAATCTTGCCTTGCTCACCGCCGTTGTCTGCGCGGGACTCTACCCCAGTG
TTGCCTCCCGTACCGTCGGCGACGTCAATTTTACAACGACATGTCAAAAG
AAAGCCAAACTTCATCAGTCCAGTGTTAATTACCACCCTGGGTCCCGTTT
CACCCGCGCAAGTACGGCAGAAGCGCATAGGGCCATGGGGGGTGGGCCGG
AATTTTTGGTGTTTTCGGAGGTTGTTCGGACGCCATCCATTTTTGTGATT
TCTAACACGACGCCGGTACCAGTGGTGAGTTTGTTTCTGATGTGTGGAGA
TTTAAAGGTTCGGGGAATGAAGGGGCTGCTTAGTGGGGAGAAAGGGAGAC
AAGAAGTGGGAGGGGAGGAAGCGGAAGGGGAGGAAGCGGAAGGGGAGGAG
GAAGGGGAGGAGGAAGTGGAGGAGGAAGACGACGATGGGGAGGGTAATCT
GGGGGAGCAGGCCTTGCTACTGCTGGACGATTGGATTACCTTCCGTTGTC
CTAAAGAGGTGGCGCTGCAGTTGTTGGCCTTGCGGTTAAGACTGCAAGAT
GCGTTTTTGGTTTTTGTCAAGCATCCGCAGGCTCGTCTTTCGGAAACGTG
TCAGGATGCGCTCCGCTCGGCTGTTCGTTTACTCACTCTTGAGAATCATT
ACATGCCGGCGGGGAAAGCAGCGGCAGCAGTATTTGGAGGCGGGGGGAGA
AATGGGCTGCAACAGCTCCATCTTGGAGGAAGGGGAAGAGGGCGGAGCAG
AGGTAGCGGTTGTGATAGTGCTTACGGGGGAATGGGAAGGAGAGGCGGGG
GAGGCCGTCCTGTAGGTGGTCGAATCGGTGGTGGCAGCGGGGGCAGGGGT
GGTCGTGTCGATAACCGCCCTATTCTCGTGTCACCGCTCGCTGCGGCTGC
TGCCAGGGCTGGGGGTCTGCAGCAGCAACAGCTAAGCCCTTCTGCCAATC
CTAACCATGGCGGATATCGTGCACCGCAGCCGCCGCGAAAGTGAGTGATA
CCGAGATAAATTTAAGAGGAACGGAGGAAATGAAATATGAAGAAATTATG
GGAAAAAAGCTTAGGGATGTAGACACTGTCGGGAAAACAAAGCGACTAAC
AAATAATTAAAC back to topprotein sequence of NO28G00980.1 >NO28G00980.1-protein ID=NO28G00980.1-protein|Name=NO28G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1483bp
MTRRGRGQGRGGGGRGDGESSNRFGEGGGSSVASSQQSMAGSSTSSSNST
SSTSRPPPPPPPHPPYQPASSRPSGKTSKNGSKGIRDTHGPSAISEAMRI
SFSTQLNQLREDPSKEELSFPPTLDNIHRKFLHALAGQLGLVSKSSGKGD
GKRFITVKKKKKGRNCGEEDGEEEDITRHPPFQPGRESLELLRGHVTKHP
LSKREYESLLKLCVSRSVTLAAAAAAAAAAEEGGKNGGGGHRAAVRAAEK
QQGPRTTSSSLTATAAIASNSKNTARNQGKKQQGYYDPAAQEQLLIKRKE
GHAAAQAKKEANRKYQAMLTARKALPAWQHSSLVVDLIKTHQVVIVSGET
GCGKSTQVPQFLLDDEAIGPTLKMAVTQPRRISAISVAERVASERMEEVG
KTVGYHIRQESEFSEGSQVVFMTPGVLLRMLMGDPELREFNVVMIDEVHE
RDKNTDFLLIILRDLLLRHRSSDLRLILMSATLQTGKLSAYFGGCPVATI
GSTCYPVQEFYLEDVLLQTRYLQKLGLVKDGSSGSSNSKSGSSKKAFGTA
GKGGGQGDNALLRALCQATPVYACEMCGQKGFRSPEEYGTHIVLCDGVVI
EVEDEGEDEGMREGGFQALEEQLLRDLEGQGKEGYVPEYEDWGETPARIN
SSGPLAALARGEEGGFISTVEDVGEGEEVMREPHRHSALECPIPAATEVQ
GQEALRAYQYAFDDELVDYDLIQSLLVYIVESGYRPGAILVFLPGWDDIS
RLRDALRRDPVLGRADKFLLLPLHSGIPSQQQREVFKSPPAGVRKIVLAT
NIAETSVTIDDIVFVVDSCRVKEKNYDPFLKLCTLQPTWISKASARQRRG
RAGRTMAGVCFHLCSRRRYESLKEFKESELLTTPLEELCLQAKLLGLAPG
YDPFERHVVSGIGGGKKKKKKKKTAAAHVLLASLALDVEEEEGEEEEEKE
DREISRLKASRLEGDSIMSFLGKALDAPHDLSVKNAIDLLVQIGALTARE
QLTDLGHKLARLPLDPRIGKMVLWGQLLGCGRTALKVGCALAYRDPFVLP
LTADGKAKAATAKMDLAGGTMSDHLALLGALSGFESAAERGGAQASSGYC
DRYFLSKSTLTTVVDVVKQVGNELAGMGFENPLFWSSNSSESKISPVVEH
DRNLALLTAVVCAGLYPSVASRTVGDVNFTTTCQKKAKLHQSSVNYHPGS
RFTRASTAEAHRAMGGGPEFLVFSEVVRTPSIFVISNTTPVPVVSLFLMC
GDLKVRGMKGLLSGEKGRQEVGGEEAEGEEAEGEEEGEEEVEEEDDDGEG
NLGEQALLLLDDWITFRCPKEVALQLLALRLRLQDAFLVFVKHPQARLSE
TCQDALRSAVRLLTLENHYMPAGKAAAAVFGGGGRNGLQQLHLGGRGRGR
SRGSGCDSAYGGMGRRGGGGRPVGGRIGGGSGGRGGRVDNRPILVSPLAA
AAARAGGLQQQQLSPSANPNHGGYRAPQPPRK* back to topmRNA from alignment at chr28:312642..317824+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO28G00980.1 ID=NO28G00980.1|Name=NO28G00980.1|organism=Nannochloropsis oceanica|type=mRNA|length=5183bp|location=Sequence derived from alignment at chr28:312642..317824+ (Nannochloropsis oceanica)
GTAAACTTTTGCTTGGCATGTTGGGGACGTACGGGTTGGGAGATGTGTAT
ACACATTTAAAGCCGAAATCTCGGCAAGATGCATGCACAGGTGCTCGAAA
AACCTTACGGCACCCCTTCCATGCTGTCTGCATCGCGGTTCATGCTTGGA
TTGGAAAGTCCGGAAAACAAGTCATTAAGTCAGTCGTATTATGACATACA
ACTGTGGTCAGAAACGGCAAGCGCGATGACGACGACGACGTTTATTCCTT
GCCAGTGGTGCGTCTTCCACCGGCGCGACACACAACCGGGACTTCACAAC
CTCTATCTTTCTCCTCTTCCACAACATGTAGCTGCGGTGCGGAGGGGCCT
CCTAACGGAGACTGAAGAAAGACTGACACGGCGAGACCAGCACAACCGAT
TTCCCGCAGCAGTGTTCCGTGGCCGATCAAACGAAGGAGTAAGGCATGAC
GCGCAGAGGACGAGGACAGGGTAGAGGTGGTGGCGGACGAGGTGATGGTG
AAAGCAGTAACAGGTTTGGAGAAGGAGGCGGCAGCAGCGTGGCGAGCAGT
CAACAAAGCATGGCAGGCAGCAGCACCAGCAGCAGCAACAGCACCAGCAG
CACCAGCAGACCACCTCCCCCTCCTCCTCCACATCCACCTTACCAACCAG
CTTCCAGCCGCCCGTCCGGTAAAACAAGCAAAAATGGGAGCAAAGGCATA
CGCGATACTCATGGACCTAGTGCGATATCGGAGGCGATGCGAATTTCGTT
TTCGACGCAGTTGAACCAGTTGCGTGAGGACCCGAGTAAGGAGGAGCTTT
CTTTCCCTCCTACCCTCGATAACATCCACAGAAAGTTCCTTCATGCATTA
GCTGGGCAGCTTGGTTTGGTATCTAAAAGCAGCGGGAAAGGAGATGGGAA
GCGCTTTATCACTGTAAAGAAGAAGAAGAAGGGTAGGAATTGCGGGGAGG
AGGATGGGGAGGAAGAGGACATTACGCGGCATCCACCCTTCCAGCCGGGG
AGGGAATCTTTGGAGCTTCTAAGAGGGCACGTGACTAAGCATCCACTTAG
TAAACGAGAGTATGAATCGCTTTTGAAGCTGTGTGTGTCACGTTCCGTAA
CGCTGGCGGCAGCGGCAGCAGCAGCGGCAGCAGCAGAAGAGGGGGGTAAG
AATGGAGGAGGGGGGCATCGGGCAGCAGTGCGTGCAGCAGAGAAGCAGCA
AGGACCACGAACAACCTCATCCTCCCTTACAGCCACTGCGGCCATCGCGA
GTAACAGCAAGAATACGGCGAGGAATCAAGGCAAGAAGCAACAAGGTTAC
TACGACCCCGCAGCCCAAGAGCAGCTGCTGATCAAGCGAAAGGAAGGCCA
CGCAGCGGCCCAAGCCAAAAAGGAAGCCAACCGTAAATACCAAGCCATGC
TGACCGCGCGTAAGGCTCTTCCAGCCTGGCAGCATTCCTCCCTCGTTGTG
GATTTGATTAAGACTCACCAGGTGGTGATCGTGTCCGGTGAGACGGGCTG
TGGGAAATCCACGCAAGTCCCTCAATTCCTCCTCGATGATGAAGCGATAG
GACCTACGCTCAAGATGGCCGTGACGCAACCCAGGAGGATCAGTGCCATT
TCCGTCGCAGAACGGGTGGCGAGTGAACGAATGGAGGAGGTGGGGAAAAC
GGTAGGGTACCACATTCGCCAGGAGAGCGAGTTCTCGGAGGGGAGCCAGG
TGGTGTTTATGACCCCGGGGGTGCTGCTGCGGATGTTAATGGGCGATCCA
GAATTGAGGGAGTTCAATGTGGTGATGATTGATGAGGTGCACGGTAGGTA
CTCTGTGATTGATTCATTCATTGATTAATTCGAATCTCTGGGTATTTTCT
TGGTTTTTTGATTCCGGTGCGTGTCCTTTTGATGACACCCTTCCTCATCC
TCATCTGGTCTCCCCCCCCTCTCTGACTTCCACCCTCCCTCCTTACTCCT
CAACACAACAACAGAACGTGACAAGAACACGGACTTCCTGCTCATCATCC
TCCGCGACCTGCTGCTGCGCCACCGTTCCTCCGACCTCCGCCTCATCCTC
ATGTCGGCTACGCTTCAAACGGGCAAGCTCTCTGCTTACTTTGGGGGGTG
TCCAGTGGCCACTATTGGCTCGACCTGCTACCCTGTCCAAGAGTTCTACC
TGGAAGATGTGCTCTTACAAACCCGGTACTTGCAGAAACTCGGTTTGGTG
AAGGACGGCAGCAGCGGCAGTAGCAACAGCAAGAGTGGCAGCAGTAAGAA
GGCCTTCGGGACGGCGGGAAAGGGAGGGGGACAAGGAGACAACGCCTTGC
TGCGTGCTTTGTGTCAGGCGACGCCTGTGTATGCGTGTGAGATGTGCGGG
CAGAAGGGATTTCGTTCCCCGGAGGAATACGGGACGCATATAGTCTTGTG
TGACGGTGTTGTGATCGAGGTGGAGGACGAGGGGGAAGACGAGGGAATGA
GGGAGGGAGGGTTCCAGGCATTGGAAGAACAGTTGTTGCGGGACTTGGAG
GGGCAGGGAAAGGAAGGGTACGTGCCTGAATACGAAGATTGGGGAGAGAC
ACCTGCACGTATCAATAGTAGTGGTCCTTTGGCTGCTTTGGCCAGAGGAG
AAGAAGGAGGATTTATTTCGACTGTGGAGGATGTGGGGGAGGGGGAGGAA
GTGATGAGAGAGCCGCACAGGCATAGTGCTTTGGAGTGCCCGATACCGGC
GGCGACGGAGGTGCAGGGACAGGAGGCATTGAGGGCATATCAGTACGCGT
TTGATGATGAGCTGGTTGACTATGACTTGATCCAGTCGTTGCTAGTATAC
ATTGTGGAGTCCGGGTATCGTCCTGGAGCGATTTTGGTGTTTTTGCCGGG
ATGGGATGATATAAGTCGGCTGCGCGATGCCTTGAGACGAGATCCCGTCC
TGGGCCGTGCGGACAAATTCTTGCTGTTGCCGCTGCATTCGGGTATTCCC
TCGCAGCAGCAGCGGGAGGTTTTCAAGAGTCCACCGGCGGGGGTCCGGAA
GATTGTCCTTGCGACTAACATTGCCGAGACCTCGGTGACCATTGATGATA
TCGTGTTTGTCGTGGATAGCTGCAGGGTGAAGGAAAAAAATTACGATCCT
TTCCTGAAACTGTGTACGTTGCAGCCGACATGGATCAGTAAGGCGAGTGC
GCGGCAGAGGAGAGGGCGGGCCGGACGGACAATGGCGGGGGTATGTTTTC
ACTTGTGTTCGCGAAGGAGGTACGAGAGTTTGAAGGAGTTTAAGGAGTCG
GAGTTGTTGACGACGCCATTGGAAGAGTTGTGTTTGCAGGCAAAGTTGCT
TGGATTGGCTCCGGGCTATGACCCCTTCGAGCGACACGTGGTTTCTGGTA
TTGGTGGTGGGAAGAAGAAGAAGAAGAAGAAGAAGACTGCGGCGGCGCAC
GTGCTGTTGGCATCATTGGCATTAGATGTGGAAGAAGAAGAAGGGGAGGA
GGAAGAGGAAAAAGAGGATAGGGAGATATCACGGTTGAAGGCCTCAAGGT
TGGAGGGGGATTCAATTATGTCTTTCTTAGGGAAAGCTCTAGATGCCCCC
CATGACTTATCAGTCAAAAATGCCATCGACCTCCTCGTTCAAATCGGCGC
CCTCACCGCCCGTGAGCAACTTACGGACTTGGGACACAAGCTCGCGCGCC
TTCCTCTGGATCCACGTATCGGTAAAATGGTCCTGTGGGGTCAACTTTTG
GGATGTGGGCGGACCGCGCTGAAGGTGGGGTGCGCGCTCGCGTATCGCGA
TCCGTTCGTCTTGCCGTTGACAGCGGATGGGAAGGCGAAAGCAGCGACAG
CAAAGATGGATTTGGCGGGGGGGACGATGAGTGACCATTTGGCGCTGTTA
GGAGCGCTGAGTGGGTTTGAGTCTGCGGCGGAGAGAGGAGGGGCGCAAGC
GTCCTCTGGGTATTGCGATCGGTACTTCCTGTCGAAGTCAACCTTGACCA
CAGTGGTAGATGTGGTGAAGCAGGTGGGCAATGAGTTAGCAGGGATGGGC
TTCGAAAATCCCCTTTTCTGGAGCAGTAACAGTAGCGAGAGCAAGATAAG
CCCAGTCGTCGAACACGACCGCAATCTTGCCTTGCTCACCGCCGTTGTCT
GCGCGGGACTCTACCCCAGTGTTGCCTCCCGTACCGTCGGCGACGTCAAT
TTTACAACGACATGTCAAAAGAAAGCCAAACTTCATCAGTCCAGTGTTAA
TTACCACCCTGGGTCCCGTTTCACCCGCGCAAGTACGGCAGAAGCGCATA
GGGCCATGGGGGGTGGGCCGGAATTTTTGGTGTTTTCGGAGGTTGTTCGG
ACGCCATCCATTTTTGTGATTTCTAACACGACGCCGGTACCAGTGGTGAG
TTTGTTTCTGATGTGTGGAGATTTAAAGGTTCGGGGAATGAAGGGGCTGC
TTAGTGGGGAGAAAGGGAGACAAGAAGTGGGAGGGGAGGAAGCGGAAGGG
GAGGAAGCGGAAGGGGAGGAGGAAGGGGAGGAGGAAGTGGAGGAGGAAGA
CGACGATGGGGAGGGTAATCTGGGGGAGCAGGCCTTGCTACTGCTGGACG
ATTGGATTACCTTCCGTTGTCCTAAAGAGGTGGCGCTGCAGTTGTTGGCC
TTGCGGTTAAGACTGCAAGATGCGTTTTTGGTTTTTGTCAAGCATCCGCA
GGCTCGTCTTTCGGAAACGTGTCAGGATGCGCTCCGCTCGGCTGTTCGTT
TACTCACTCTTGAGAATCATTACATGCCGGCGGGGAAAGCAGCGGCAGCA
GTATTTGGAGGCGGGGGGAGAAATGGGCTGCAACAGCTCCATCTTGGAGG
AAGGGGAAGAGGGCGGAGCAGAGGTAGCGGTTGTGATAGTGCTTACGGGG
GAATGGGAAGGAGAGGCGGGGGAGGCCGTCCTGTAGGTGGTCGAATCGGT
GGTGGCAGCGGGGGCAGGGGTGGTCGTGTCGATAACCGCCCTATTCTCGT
GTCACCGCTCGCTGCGGCTGCTGCCAGGGCTGGGGGTCTGCAGCAGCAAC
AGCTAAGCCCTTCTGCCAATCCTAACCATGGCGGATATCGTGCACCGCAG
CCGCCGCGAAAGTGAGTGATACCGAGATAAATTTAAGAGGAACGGAGGAA
ATGAAATATGAAGAAATTATGGGAAAAAAGCTTAGGGATGTAGACACTGT
CGGGAAAACAAAGCGACTAACAAATAATTAAAC back to topCoding sequence (CDS) from alignment at chr28:312642..317824+ >NO28G00980.1 ID=NO28G00980.1|Name=NO28G00980.1|organism=Nannochloropsis oceanica|type=CDS|length=4449bp|location=Sequence derived from alignment at chr28:312642..317824+ (Nannochloropsis oceanica)
ATGACGCGCAGAGGACGAGGACAGGGTAGAGGTGGTGGCGGACGAGGTGA
TGGTGAAAGCAGTAACAGGTTTGGAGAAGGAGGCGGCAGCAGCGTGGCGA
GCAGTCAACAAAGCATGGCAGGCAGCAGCACCAGCAGCAGCAACAGCACC
AGCAGCACCAGCAGACCACCTCCCCCTCCTCCTCCACATCCACCTTACCA
ACCAGCTTCCAGCCGCCCGTCCGGTAAAACAAGCAAAAATGGGAGCAAAG
GCATACGCGATACTCATGGACCTAGTGCGATATCGGAGGCGATGCGAATT
TCGTTTTCGACGCAGTTGAACCAGTTGCGTGAGGACCCGAGTAAGGAGGA
GCTTTCTTTCCCTCCTACCCTCGATAACATCCACAGAAAGTTCCTTCATG
CATTAGCTGGGCAGCTTGGTTTGGTATCTAAAAGCAGCGGGAAAGGAGAT
GGGAAGCGCTTTATCACTGTAAAGAAGAAGAAGAAGGGTAGGAATTGCGG
GGAGGAGGATGGGGAGGAAGAGGACATTACGCGGCATCCACCCTTCCAGC
CGGGGAGGGAATCTTTGGAGCTTCTAAGAGGGCACGTGACTAAGCATCCA
CTTAGTAAACGAGAGTATGAATCGCTTTTGAAGCTGTGTGTGTCACGTTC
CGTAACGCTGGCGGCAGCGGCAGCAGCAGCGGCAGCAGCAGAAGAGGGGG
GTAAGAATGGAGGAGGGGGGCATCGGGCAGCAGTGCGTGCAGCAGAGAAG
CAGCAAGGACCACGAACAACCTCATCCTCCCTTACAGCCACTGCGGCCAT
CGCGAGTAACAGCAAGAATACGGCGAGGAATCAAGGCAAGAAGCAACAAG
GTTACTACGACCCCGCAGCCCAAGAGCAGCTGCTGATCAAGCGAAAGGAA
GGCCACGCAGCGGCCCAAGCCAAAAAGGAAGCCAACCGTAAATACCAAGC
CATGCTGACCGCGCGTAAGGCTCTTCCAGCCTGGCAGCATTCCTCCCTCG
TTGTGGATTTGATTAAGACTCACCAGGTGGTGATCGTGTCCGGTGAGACG
GGCTGTGGGAAATCCACGCAAGTCCCTCAATTCCTCCTCGATGATGAAGC
GATAGGACCTACGCTCAAGATGGCCGTGACGCAACCCAGGAGGATCAGTG
CCATTTCCGTCGCAGAACGGGTGGCGAGTGAACGAATGGAGGAGGTGGGG
AAAACGGTAGGGTACCACATTCGCCAGGAGAGCGAGTTCTCGGAGGGGAG
CCAGGTGGTGTTTATGACCCCGGGGGTGCTGCTGCGGATGTTAATGGGCG
ATCCAGAATTGAGGGAGTTCAATGTGGTGATGATTGATGAGGTGCACGAA
CGTGACAAGAACACGGACTTCCTGCTCATCATCCTCCGCGACCTGCTGCT
GCGCCACCGTTCCTCCGACCTCCGCCTCATCCTCATGTCGGCTACGCTTC
AAACGGGCAAGCTCTCTGCTTACTTTGGGGGGTGTCCAGTGGCCACTATT
GGCTCGACCTGCTACCCTGTCCAAGAGTTCTACCTGGAAGATGTGCTCTT
ACAAACCCGGTACTTGCAGAAACTCGGTTTGGTGAAGGACGGCAGCAGCG
GCAGTAGCAACAGCAAGAGTGGCAGCAGTAAGAAGGCCTTCGGGACGGCG
GGAAAGGGAGGGGGACAAGGAGACAACGCCTTGCTGCGTGCTTTGTGTCA
GGCGACGCCTGTGTATGCGTGTGAGATGTGCGGGCAGAAGGGATTTCGTT
CCCCGGAGGAATACGGGACGCATATAGTCTTGTGTGACGGTGTTGTGATC
GAGGTGGAGGACGAGGGGGAAGACGAGGGAATGAGGGAGGGAGGGTTCCA
GGCATTGGAAGAACAGTTGTTGCGGGACTTGGAGGGGCAGGGAAAGGAAG
GGTACGTGCCTGAATACGAAGATTGGGGAGAGACACCTGCACGTATCAAT
AGTAGTGGTCCTTTGGCTGCTTTGGCCAGAGGAGAAGAAGGAGGATTTAT
TTCGACTGTGGAGGATGTGGGGGAGGGGGAGGAAGTGATGAGAGAGCCGC
ACAGGCATAGTGCTTTGGAGTGCCCGATACCGGCGGCGACGGAGGTGCAG
GGACAGGAGGCATTGAGGGCATATCAGTACGCGTTTGATGATGAGCTGGT
TGACTATGACTTGATCCAGTCGTTGCTAGTATACATTGTGGAGTCCGGGT
ATCGTCCTGGAGCGATTTTGGTGTTTTTGCCGGGATGGGATGATATAAGT
CGGCTGCGCGATGCCTTGAGACGAGATCCCGTCCTGGGCCGTGCGGACAA
ATTCTTGCTGTTGCCGCTGCATTCGGGTATTCCCTCGCAGCAGCAGCGGG
AGGTTTTCAAGAGTCCACCGGCGGGGGTCCGGAAGATTGTCCTTGCGACT
AACATTGCCGAGACCTCGGTGACCATTGATGATATCGTGTTTGTCGTGGA
TAGCTGCAGGGTGAAGGAAAAAAATTACGATCCTTTCCTGAAACTGTGTA
CGTTGCAGCCGACATGGATCAGTAAGGCGAGTGCGCGGCAGAGGAGAGGG
CGGGCCGGACGGACAATGGCGGGGGTATGTTTTCACTTGTGTTCGCGAAG
GAGGTACGAGAGTTTGAAGGAGTTTAAGGAGTCGGAGTTGTTGACGACGC
CATTGGAAGAGTTGTGTTTGCAGGCAAAGTTGCTTGGATTGGCTCCGGGC
TATGACCCCTTCGAGCGACACGTGGTTTCTGGTATTGGTGGTGGGAAGAA
GAAGAAGAAGAAGAAGAAGACTGCGGCGGCGCACGTGCTGTTGGCATCAT
TGGCATTAGATGTGGAAGAAGAAGAAGGGGAGGAGGAAGAGGAAAAAGAG
GATAGGGAGATATCACGGTTGAAGGCCTCAAGGTTGGAGGGGGATTCAAT
TATGTCTTTCTTAGGGAAAGCTCTAGATGCCCCCCATGACTTATCAGTCA
AAAATGCCATCGACCTCCTCGTTCAAATCGGCGCCCTCACCGCCCGTGAG
CAACTTACGGACTTGGGACACAAGCTCGCGCGCCTTCCTCTGGATCCACG
TATCGGTAAAATGGTCCTGTGGGGTCAACTTTTGGGATGTGGGCGGACCG
CGCTGAAGGTGGGGTGCGCGCTCGCGTATCGCGATCCGTTCGTCTTGCCG
TTGACAGCGGATGGGAAGGCGAAAGCAGCGACAGCAAAGATGGATTTGGC
GGGGGGGACGATGAGTGACCATTTGGCGCTGTTAGGAGCGCTGAGTGGGT
TTGAGTCTGCGGCGGAGAGAGGAGGGGCGCAAGCGTCCTCTGGGTATTGC
GATCGGTACTTCCTGTCGAAGTCAACCTTGACCACAGTGGTAGATGTGGT
GAAGCAGGTGGGCAATGAGTTAGCAGGGATGGGCTTCGAAAATCCCCTTT
TCTGGAGCAGTAACAGTAGCGAGAGCAAGATAAGCCCAGTCGTCGAACAC
GACCGCAATCTTGCCTTGCTCACCGCCGTTGTCTGCGCGGGACTCTACCC
CAGTGTTGCCTCCCGTACCGTCGGCGACGTCAATTTTACAACGACATGTC
AAAAGAAAGCCAAACTTCATCAGTCCAGTGTTAATTACCACCCTGGGTCC
CGTTTCACCCGCGCAAGTACGGCAGAAGCGCATAGGGCCATGGGGGGTGG
GCCGGAATTTTTGGTGTTTTCGGAGGTTGTTCGGACGCCATCCATTTTTG
TGATTTCTAACACGACGCCGGTACCAGTGGTGAGTTTGTTTCTGATGTGT
GGAGATTTAAAGGTTCGGGGAATGAAGGGGCTGCTTAGTGGGGAGAAAGG
GAGACAAGAAGTGGGAGGGGAGGAAGCGGAAGGGGAGGAAGCGGAAGGGG
AGGAGGAAGGGGAGGAGGAAGTGGAGGAGGAAGACGACGATGGGGAGGGT
AATCTGGGGGAGCAGGCCTTGCTACTGCTGGACGATTGGATTACCTTCCG
TTGTCCTAAAGAGGTGGCGCTGCAGTTGTTGGCCTTGCGGTTAAGACTGC
AAGATGCGTTTTTGGTTTTTGTCAAGCATCCGCAGGCTCGTCTTTCGGAA
ACGTGTCAGGATGCGCTCCGCTCGGCTGTTCGTTTACTCACTCTTGAGAA
TCATTACATGCCGGCGGGGAAAGCAGCGGCAGCAGTATTTGGAGGCGGGG
GGAGAAATGGGCTGCAACAGCTCCATCTTGGAGGAAGGGGAAGAGGGCGG
AGCAGAGGTAGCGGTTGTGATAGTGCTTACGGGGGAATGGGAAGGAGAGG
CGGGGGAGGCCGTCCTGTAGGTGGTCGAATCGGTGGTGGCAGCGGGGGCA
GGGGTGGTCGTGTCGATAACCGCCCTATTCTCGTGTCACCGCTCGCTGCG
GCTGCTGCCAGGGCTGGGGGTCTGCAGCAGCAACAGCTAAGCCCTTCTGC
CAATCCTAACCATGGCGGATATCGTGCACCGCAGCCGCCGCGAAAGTGA back to top
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