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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr28 | genome | chr28:218916..221595 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO28G00620.1 ID=NO28G00620.1|Name=NO28G00620.1|organism=Nannochloropsis oceanica|type=mRNA|length=2576bp CAACAGGGAACACTCATTGAGGTATATGCAGCTGTAGTGCCTGGGTAAGG CAGTTATGCAGCCGTAACGGACCACAAACGATGCTTTTCCTTCCTCCCGC TAAGTACGACACCTGCCTAGCACGTCTTCCTCGGCCTCCTTCATCGCTCC TCGATTTCCTACCCTTCCTACCCTTTCTATCAGCCTGCATACCTGCCAAT AATAAGCTCTTGAAAGCAGGGGCACAACAGCTGTTTCAGCCCCTATTCCG AGTCAAATCAACAAATGCAGCCATGCTGACCAGTAGCTGGTGTCAGAATC CAGCACAACAGCCGCCGCTGCTCCCTCTATTGGCGCCCTTGTCCTCGTCG TCCCCGTCGGACCCGTTGCACCTCGATGTGACTGTCGGCCCGTCACCATT GAGGGAACAGCCGCAGGAACAGCAGGACCAAGGTAGAGCAGTGTTTTCTG CGACAAAGCAGGAGTGGGTGCTCCGAAAACACGAGCAACACTTGCACAGG CAGCAGCAGGAAAGGCAGCAGAAGAGAGTGGAGGCAAATTACCAAGTGCC GCAGGAAAGAGAAGAGGTCGAGAAAAGGCAACGAGACATCCACGCTGATG TCGAGCAGCAGCGACAAAAATTTAGGGAGGACCAGCTGCAGCTGCTAGAT CAGCGTCAAGGAAAGCAGCTTGTGCAGCAGCAGCACCACCACCACCACCA ACAACAACGGCAGCAGCAGCAAAAGCTGCAGATGTTGTGGTCTCCACAAA ATTCGCAGAAGCATATTTTGACACCCTTCCAGCGACTGGTGCTCCGGCAG CAGCAGCAGCTACATCAAGAGCCACTCATTTTTCTTCCCTCCAACTGCCC TTCCAAGTTCCAGCAGCAGCGACAGCAGGAGGAGGAGCAGTCATCTCCCT TTGTAGCTTTATCAGCAGCATGTGAAGGGCATTTCTTGGTTGAGAGATCA AAGAGGGAGGAGGAAAGGGGAGAGGGAGAGCAGGGAAAGGACGGCTCCAC GAGCGGCATACAAGAGGGATGGATGACCTTCCCTCCCATTCTTCCCGCCA TTGCTGCTGCTACGCCTGATCACGATACTGCTCTTGCTTCTTCTGCTGTA TTTGGTGAAGCGAGAGGAGTGAAGCGAACACGCATGGAGGGAAGAGGACA GCGGGGAATGATCGGAGAGAAAGGAAGCGGAGGAAGAGGAGGACGGTCAC CAGAAAGGGGCACTGTCCCAAGAGAAAACCAGTTTCAACTTCACAGTCCA AGTGGTAGTGGCAGCAGTTTGAGCCGCAGCAGCTTTACTTGCATGAAGGG CCGTGGCACCTGCCATAAATACCCGGGTGAAAAGCATGCCAGGCGGGCTC CAAGGGGGCCTCTAGCGTCGCCGGCCTACCCGACGCCCCTCCTCGCGAGA CGTATGGTGCTTGGTGAGAACAATCGACTCACACTCCAGGACGAACAATA TCGACAGCAGCAGCAGCAACAGCAGCAGCAGACACATCCTGGATCCTTCC TTTTAAAGAGCAGCAGCACCAGCACCGTCAGCAGCTTTGGCAGCACCATG AGAGGAGGAGGAGATGAACTTCTAAATCTTTTAATGGGCTTCGACCGCAT CAACGACTCGTCTTCTCATTGTTGTACTTGTCGTGCTTCTCCTTCCTGTT CTTCTTCCCCTTCATCTTATGCGTCATCAAGTGGCATGCTTTTTTACCGA CGGGAGAACAACCGCTTAACGACCATTATTCGATCCCTTGAAGGAAAGCT GTTCACCCTGACTTCTCAACTAGAGAACCAGCGGCTGCAGCAGGAGGAAC AGCGAAAGCAGCAGGAGATTGAGTCACTTGCAGACGGGTGGTGGTGTCAC GAACTGCTTTTCTCCTCCCTTCCATACTCCCTTCCTTCCTCCCCATCCTC TCTTCTGCCGCGTGATGACGTCGCGCTGGAAGAGAGCTTGGACCGATTTT TGGTTGAGATGTTGAACGGCTTCAACGGCGAAGGCATGCTTTGAGAAGAA CGTTTATTCCCCATCTCATTTTCGTCCTCTCTCACTCTCTCCATTTCTCC TCCCTCCCTCTTCCTTCCCTCACTGCACGAGGTGAAATCGACTTAGAAAA TAGGAGCATGATAAGGAGCATGATGAACACTCAATCAAGACGACTACCAC CTTGGTAGAGTGAGAGAGTGTGTATCTGTTTATCTATCTATCTACATTGA AACATGCCAGTAACTTTCCAGCAACCAAGCGACCAGATGCACGCCTCGAT TCCTCATGAAACCAGGCCAAGCCAAGCCGAGCAACACTAGATAAGGAAAC CAACGACCGGAGAAGGCAAGAAGGAGAGTGGACCTGGTAGAACGCGAATT ACATCGTAACTTTATACGTGCACAGACAAATATACTCAAACATGACCCCT CATCTCGATGATATGTTGAACAAAGCACAAAGCAAGACAATAAAAGCTGA ACAAGAGAGGAGAGAGAGAAGAGGAAGCAATGGCCTCTCAATAATAGGTT CACTTTAAAATGTGTGGAAAGTAAAATATCCCGCTTCACACCTACGACTC CAGCTTTTCAAAAACGACAAAGATTC back to topprotein sequence of NO28G00620.1 >NO28G00620.1-protein ID=NO28G00620.1-protein|Name=NO28G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp MLFLPPAKYDTCLARLPRPPSSLLDFLPFLPFLSACIPANNKLLKAGAQQ LFQPLFRVKSTNAAMLTSSWCQNPAQQPPLLPLLAPLSSSSPSDPLHLDV TVGPSPLREQPQEQQDQGRAVFSATKQEWVLRKHEQHLHRQQQERQQKRV EANYQVPQEREEVEKRQRDIHADVEQQRQKFREDQLQLLDQRQGKQLVQQ QHHHHHQQQRQQQQKLQMLWSPQNSQKHILTPFQRLVLRQQQQLHQEPLI FLPSNCPSKFQQQRQQEEEQSSPFVALSAACEGHFLVERSKREEERGEGE QGKDGSTSGIQEGWMTFPPILPAIAAATPDHDTALASSAVFGEARGVKRT RMEGRGQRGMIGEKGSGGRGGRSPERGTVPRENQFQLHSPSGSGSSLSRS SFTCMKGRGTCHKYPGEKHARRAPRGPLASPAYPTPLLARRMVLGENNRL TLQDEQYRQQQQQQQQQTHPGSFLLKSSSTSTVSSFGSTMRGGGDELLNL LMGFDRINDSSSHCCTCRASPSCSSSPSSYASSSGMLFYRRENNRLTTII RSLEGKLFTLTSQLENQRLQQEEQRKQQEIESLADGWWCHELLFSSLPYS LPSSPSSLLPRDDVALEESLDRFLVEMLNGFNGEGML* back to topmRNA from alignment at chr28:218916..221595+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO28G00620.1 ID=NO28G00620.1|Name=NO28G00620.1|organism=Nannochloropsis oceanica|type=mRNA|length=2680bp|location=Sequence derived from alignment at chr28:218916..221595+ (Nannochloropsis oceanica) CAACAGGGAACACTCATTGAGGTATATGCAGCTGTAGTGCCTGGGTAAGG
CAGTTATGCAGCCGTAACGGACCACAAACGATGCTTTTCCTTCCTCCCGC
TAAGTACGACACCTGCCTAGCACGTCTTCCTCGGCCTCCTTCATCGCTCC
TCGATTTCCTACCCTTCCTACCCTTTCTATCAGCCTGCATACCTGCCAAT
AATAAGCTCTTGAAAGCAGGGGCACAAGTAAGATAGGATAACGGGATGAG
GTGCAAGAAGATAGCCAACAAATCATGCCTTCGCCTTCCCTCAACCACCA
CCATCACCACCATCACCACCATCACGAGCAGCAGCTGTTTCAGCCCCTAT
TCCGAGTCAAATCAACAAATGCAGCCATGCTGACCAGTAGCTGGTGTCAG
AATCCAGCACAACAGCCGCCGCTGCTCCCTCTATTGGCGCCCTTGTCCTC
GTCGTCCCCGTCGGACCCGTTGCACCTCGATGTGACTGTCGGCCCGTCAC
CATTGAGGGAACAGCCGCAGGAACAGCAGGACCAAGGTAGAGCAGTGTTT
TCTGCGACAAAGCAGGAGTGGGTGCTCCGAAAACACGAGCAACACTTGCA
CAGGCAGCAGCAGGAAAGGCAGCAGAAGAGAGTGGAGGCAAATTACCAAG
TGCCGCAGGAAAGAGAAGAGGTCGAGAAAAGGCAACGAGACATCCACGCT
GATGTCGAGCAGCAGCGACAAAAATTTAGGGAGGACCAGCTGCAGCTGCT
AGATCAGCGTCAAGGAAAGCAGCTTGTGCAGCAGCAGCACCACCACCACC
ACCAACAACAACGGCAGCAGCAGCAAAAGCTGCAGATGTTGTGGTCTCCA
CAAAATTCGCAGAAGCATATTTTGACACCCTTCCAGCGACTGGTGCTCCG
GCAGCAGCAGCAGCTACATCAAGAGCCACTCATTTTTCTTCCCTCCAACT
GCCCTTCCAAGTTCCAGCAGCAGCGACAGCAGGAGGAGGAGCAGTCATCT
CCCTTTGTAGCTTTATCAGCAGCATGTGAAGGGCATTTCTTGGTTGAGAG
ATCAAAGAGGGAGGAGGAAAGGGGAGAGGGAGAGCAGGGAAAGGACGGCT
CCACGAGCGGCATACAAGAGGGATGGATGACCTTCCCTCCCATTCTTCCC
GCCATTGCTGCTGCTACGCCTGATCACGATACTGCTCTTGCTTCTTCTGC
TGTATTTGGTGAAGCGAGAGGAGTGAAGCGAACACGCATGGAGGGAAGAG
GACAGCGGGGAATGATCGGAGAGAAAGGAAGCGGAGGAAGAGGAGGACGG
TCACCAGAAAGGGGCACTGTCCCAAGAGAAAACCAGTTTCAACTTCACAG
TCCAAGTGGTAGTGGCAGCAGTTTGAGCCGCAGCAGCTTTACTTGCATGA
AGGGCCGTGGCACCTGCCATAAATACCCGGGTGAAAAGCATGCCAGGCGG
GCTCCAAGGGGGCCTCTAGCGTCGCCGGCCTACCCGACGCCCCTCCTCGC
GAGACGTATGGTGCTTGGTGAGAACAATCGACTCACACTCCAGGACGAAC
AATATCGACAGCAGCAGCAGCAACAGCAGCAGCAGACACATCCTGGATCC
TTCCTTTTAAAGAGCAGCAGCACCAGCACCGTCAGCAGCTTTGGCAGCAC
CATGAGAGGAGGAGGAGATGAACTTCTAAATCTTTTAATGGGCTTCGACC
GCATCAACGACTCGTCTTCTCATTGTTGTACTTGTCGTGCTTCTCCTTCC
TGTTCTTCTTCCCCTTCATCTTATGCGTCATCAAGTGGCATGCTTTTTTA
CCGACGGGAGAACAACCGCTTAACGACCATTATTCGATCCCTTGAAGGAA
AGCTGTTCACCCTGACTTCTCAACTAGAGAACCAGCGGCTGCAGCAGGAG
GAACAGCGAAAGCAGCAGGAGATTGAGTCACTTGCAGACGGGTGGTGGTG
TCACGAACTGCTTTTCTCCTCCCTTCCATACTCCCTTCCTTCCTCCCCAT
CCTCTCTTCTGCCGCGTGATGACGTCGCGCTGGAAGAGAGCTTGGACCGA
TTTTTGGTTGAGATGTTGAACGGCTTCAACGGCGAAGGCATGCTTTGAGA
AGAACGTTTATTCCCCATCTCATTTTCGTCCTCTCTCACTCTCTCCATTT
CTCCTCCCTCCCTCTTCCTTCCCTCACTGCACGAGGTGAAATCGACTTAG
AAAATAGGAGCATGATAAGGAGCATGATGAACACTCAATCAAGACGACTA
CCACCTTGGTAGAGTGAGAGAGTGTGTATCTGTTTATCTATCTATCTACA
TTGAAACATGCCAGTAACTTTCCAGCAACCAAGCGACCAGATGCACGCCT
CGATTCCTCATGAAACCAGGCCAAGCCAAGCCGAGCAACACTAGATAAGG
AAACCAACGACCGGAGAAGGCAAGAAGGAGAGTGGACCTGGTAGAACGCG
AATTACATCGTAACTTTATACGTGCACAGACAAATATACTCAAACATGAC
CCCTCATCTCGATGATATGTTGAACAAAGCACAAAGCAAGACAATAAAAG
CTGAACAAGAGAGGAGAGAGAGAAGAGGAAGCAATGGCCTCTCAATAATA
GGTTCACTTTAAAATGTGTGGAAAGTAAAATATCCCGCTTCACACCTACG
ACTCCAGCTTTTCAAAAACGACAAAGATTC back to topCoding sequence (CDS) from alignment at chr28:218916..221595+ >NO28G00620.1 ID=NO28G00620.1|Name=NO28G00620.1|organism=Nannochloropsis oceanica|type=CDS|length=1914bp|location=Sequence derived from alignment at chr28:218916..221595+ (Nannochloropsis oceanica) ATGCTTTTCCTTCCTCCCGCTAAGTACGACACCTGCCTAGCACGTCTTCC TCGGCCTCCTTCATCGCTCCTCGATTTCCTACCCTTCCTACCCTTTCTAT CAGCCTGCATACCTGCCAATAATAAGCTCTTGAAAGCAGGGGCACAACAG CTGTTTCAGCCCCTATTCCGAGTCAAATCAACAAATGCAGCCATGCTGAC CAGTAGCTGGTGTCAGAATCCAGCACAACAGCCGCCGCTGCTCCCTCTAT TGGCGCCCTTGTCCTCGTCGTCCCCGTCGGACCCGTTGCACCTCGATGTG ACTGTCGGCCCGTCACCATTGAGGGAACAGCCGCAGGAACAGCAGGACCA AGGTAGAGCAGTGTTTTCTGCGACAAAGCAGGAGTGGGTGCTCCGAAAAC ACGAGCAACACTTGCACAGGCAGCAGCAGGAAAGGCAGCAGAAGAGAGTG GAGGCAAATTACCAAGTGCCGCAGGAAAGAGAAGAGGTCGAGAAAAGGCA ACGAGACATCCACGCTGATGTCGAGCAGCAGCGACAAAAATTTAGGGAGG ACCAGCTGCAGCTGCTAGATCAGCGTCAAGGAAAGCAGCTTGTGCAGCAG CAGCACCACCACCACCACCAACAACAACGGCAGCAGCAGCAAAAGCTGCA GATGTTGTGGTCTCCACAAAATTCGCAGAAGCATATTTTGACACCCTTCC AGCGACTGGTGCTCCGGCAGCAGCAGCAGCTACATCAAGAGCCACTCATT TTTCTTCCCTCCAACTGCCCTTCCAAGTTCCAGCAGCAGCGACAGCAGGA GGAGGAGCAGTCATCTCCCTTTGTAGCTTTATCAGCAGCATGTGAAGGGC ATTTCTTGGTTGAGAGATCAAAGAGGGAGGAGGAAAGGGGAGAGGGAGAG CAGGGAAAGGACGGCTCCACGAGCGGCATACAAGAGGGATGGATGACCTT CCCTCCCATTCTTCCCGCCATTGCTGCTGCTACGCCTGATCACGATACTG CTCTTGCTTCTTCTGCTGTATTTGGTGAAGCGAGAGGAGTGAAGCGAACA CGCATGGAGGGAAGAGGACAGCGGGGAATGATCGGAGAGAAAGGAAGCGG AGGAAGAGGAGGACGGTCACCAGAAAGGGGCACTGTCCCAAGAGAAAACC AGTTTCAACTTCACAGTCCAAGTGGTAGTGGCAGCAGTTTGAGCCGCAGC AGCTTTACTTGCATGAAGGGCCGTGGCACCTGCCATAAATACCCGGGTGA AAAGCATGCCAGGCGGGCTCCAAGGGGGCCTCTAGCGTCGCCGGCCTACC CGACGCCCCTCCTCGCGAGACGTATGGTGCTTGGTGAGAACAATCGACTC ACACTCCAGGACGAACAATATCGACAGCAGCAGCAGCAACAGCAGCAGCA GACACATCCTGGATCCTTCCTTTTAAAGAGCAGCAGCACCAGCACCGTCA GCAGCTTTGGCAGCACCATGAGAGGAGGAGGAGATGAACTTCTAAATCTT TTAATGGGCTTCGACCGCATCAACGACTCGTCTTCTCATTGTTGTACTTG TCGTGCTTCTCCTTCCTGTTCTTCTTCCCCTTCATCTTATGCGTCATCAA GTGGCATGCTTTTTTACCGACGGGAGAACAACCGCTTAACGACCATTATT CGATCCCTTGAAGGAAAGCTGTTCACCCTGACTTCTCAACTAGAGAACCA GCGGCTGCAGCAGGAGGAACAGCGAAAGCAGCAGGAGATTGAGTCACTTG CAGACGGGTGGTGGTGTCACGAACTGCTTTTCTCCTCCCTTCCATACTCC CTTCCTTCCTCCCCATCCTCTCTTCTGCCGCGTGATGACGTCGCGCTGGA AGAGAGCTTGGACCGATTTTTGGTTGAGATGTTGAACGGCTTCAACGGCG AAGGCATGCTTTGA back to top
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