NO28G00430.1, NO28G00430.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO28G00430.1
Unique Name	NO28G00430.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4967
Alignment location	chr28:164756..171589 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr28	genome	chr28:164756..171589 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO28G00430.1 vs.
Match: XP_008864063.1 (hypothetical protein H310_02356 [Aphanomyces invadans]; ETW07970.1 hypothetical protein H310_02356 [Aphanomyces invadans])

HSP 1 Score: 698.4 bits (1801), Expect = 1.900e-197
Identity = 334/447 (74.72%), Postives = 393/447 (87.92%), Query Frame = 0

Query:  115 EGTPRADPTLPRHTPQRRRSSLIRNQQRMAALKDLPMLRDTSAARREALFQQKLQLCAVVFNFDDPQADKKGKDMKRQTLLELVDFINTPAGQKIFTESLMPDIMACVTANICRSLPPQTEDFDPEEDDPILEPSWPHLQVVYEFFLRFVVSTEVNAKTAKKYVDQRFCASLIELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRKAISSVFFRFVYETEHHNGIAELLEILGSIINGFAIPLKKEHLHFLERALLPLHKPKCVALYHQQLSYCIIQYIEKDPNTAVAVLQGIVRFWPWSCSSKQVLFLNELEEILELLGMDQLLQVRETLFRLIAKCLGSHHFQVAERALFLWNNENLVNTGCLSRQHASVILPLIYGPLYRNSADHWNATVESLAQNVLKMYMEYDFALYDQCATEYLRLEEEREHKAEESAKKWEAIARLAAS 562
            E   R+D +LP+   +RRRSSL+RNQ ++AALKDLP L+DT+  +REALFQQKL+LC+V+FNF+D  +DKKGKD+KRQTLLELVD++N   GQKIFTE+LMPDIMA V+ANICR+LPPQTEDFDPEED+P+LEPSWPHLQVVYEFFLRF+VS EVNAK AKK+VDQ+FC+++IELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRKAIS+VF+RFVYETE HNGI ELLEILGSIINGFA+PLK+EHL FL +AL+PLHKPKCV+LYHQQLSYCI QY+EKDP+TA+ ++ GIV+FWPW+CSSKQVLFLNELEEILEL+G DQL Q+ + LFR+++KCLGS HFQV+ERALFLWNNE+LVN GCLSRQHA +ILP+IYGPLY+NS  HWN TVE LAQNVLK+YM+YD AL+D+CA EYL  EE    K    A KW+ I  LA S
Sbjct:   51 ENVARSDVSLPKR--ERRRSSLVRNQ-KVAALKDLPHLKDTNMQKREALFQQKLELCSVLFNFEDAASDKKGKDLKRQTLLELVDYVNNAGGQKIFTEALMPDIMAMVSANICRALPPQTEDFDPEEDEPVLEPSWPHLQVVYEFFLRFIVSGEVNAKVAKKFVDQKFCSNVIELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRKAISNVFYRFVYETERHNGIGELLEILGSIINGFAMPLKREHLQFLVKALVPLHKPKCVSLYHQQLSYCITQYVEKDPDTAIPIISGIVKFWPWACSSKQVLFLNELEEILELMGPDQLQQIHKELFRVLSKCLGSQHFQVSERALFLWNNEHLVNNGCLSRQHAGLILPVIYGPLYKNSLGHWNTTVEGLAQNVLKLYMDYDMALFDKCAKEYLAKEERVVEKVTAQADKWKKIEILAES 494

The following BLAST results are available for this feature:

BLAST of NO28G00430.1 vs.

BLAST of NO28G00430.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_008864063.1	1.900e-197	74.72	hypothetical protein H310_02356 [Aphanomyces invad...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO28G00430	NO28G00430	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO28G00430.1	NO28G00430.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO28G00430.1.cds1	NO28G00430.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds2	NO28G00430.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds3	NO28G00430.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds4	NO28G00430.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds5	NO28G00430.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds6	NO28G00430.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds7	NO28G00430.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds8	NO28G00430.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds9	NO28G00430.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds10	NO28G00430.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds11	NO28G00430.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00430.1.cds12	NO28G00430.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr28:164756..171589+
coding sequence from alignment at chr28:164756..171589+

mRNA sequence

>NO28G00430.1 ID=NO28G00430.1|Name=NO28G00430.1|organism=Nannochloropsis oceanica|type=mRNA|length=4967bp
CGTTTTTTCACCAGCGATTTTTCTTCTTGTCTTGGCTTTCCTTGTCATTT
CTTTATTTCTCTTTGGAGACCCCTCTTTTTATCGCATTTTTTTTTCTCAT
TTATTCAGTCATGCAAAAATACTTTGTATGAACTGTCTATATCTATCCAG
GGACCCCACTAGCAGCTCCTTCCTCGCTTCCTCGGCCATTTCCACCACCC
ACTCGAGATTATGCACAAAGAGCACCACCTCCCCGAGTATCTCACGACAC
AGTAATAAATGGTGGATATACGCCCTAGAATGGGGTGTGCGGCAGGCGAG
GCACCCACACCCTTCCCTTAAGGCCCTCGCGTCCTTCCTCCATTTCCGAT
CCCATAAATTTATTATCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCTTCCCCCTTCACACCTTCCTCCCTCCGGGTCCTCTTCCT
CGGCCGTCTTTTCCCCTCCCTTCCATCCTTCCGACCCTCATTCTTCACCC
TCCCCACCAACGCATGTCCCTCCCTCGTTAAAAGTAACGGTAAAGGGCAG
GCGACGACATCCACTCCTGCGGCAACCGCACTCAGCACGTCCTCCATCCC
TCCCTGCCCTGCCACCGCCATGCGAAGCCAGGAGGGAGGGAGCGAGGAAA
TGACAGTATTGTAGACAGAAAGTCGAGCAGCCGCCGTCTCGCCGAGTCCC
AGGCCACCGAGAACAACTCCGAGGATCGGGGAGGGAGGGAGGGAGGGAGG
AAGGGCGATCTTGTCGAGGGTGAGGCGGACGCTGTGTGAGCGCATCTTCA
GGTCTGATCCTCCCACGATTCCAGCCAACAAGAAAGGGCTCTTGCGACGT
ATTCCCGCGCTGGATTTTCCTTCCTCCCCTCCTCCTTCTGACTGAGGGAG
GAAGGGAAGGAGGGCGAGGTCTTCAACCCACCTGGCTGTGCGTTCGACAG
CCTTTTGTTGTCTTGTTCTACTAGCGTCTTCGGGAGCCTCGTCCATGATG
GATACTGCCATGGAAACGAGGGAGGGAGGAGGGAAGGGAGGGAGGGCATC
GGCCGTGGGGTCGCAGGAGGGAGGGAGGGAGGGAGGGAAGGCGAGGGAGG
CGATGAGTGCGCGGTAGGAGGAGGGGGTGAGGGATTTTCGGCCGTTGGAT
GTGTCGAAACTGACTTGATTGAAATTGCAGCTGGCAGGAGGAAGGGTTAG
GGGCGCGCTTCCCCCTCCCCGGAGGGAGAGACAGGTGGGAAGGAGTGGGA
GAAGAGAGGGAGGGAGGGTGGGGGGGAGGGAGGGGAGGTTGTCCTTGATG
GGAAGGCAGTCTCTCACGTCCATGAGAAAGAGACCAAAGGAGTGGGGGTG
GCGTGTATGTAGGTCTAGCAAAAGGTCTGGGGTGAGGTAGGGAGGGGCGC
CGTGCTCGGTGGGGAGGGCGAGGAGGGGTGTGTGGAGGGGGAGGGAGGAG
GGACGAGAGCCTAGGTGAAGGAGGCCGGCGCGAGGGCTGAGAGTGCTGGC
ATCGTTCGATGCTGGAGGGTATACAACCTGGAAAGGCATTGTAATAGAAG
GTCTGTGCTGTTCTGCCGCGGCTTGTGGTGGCGATGTAGACATCGTGGGA
CTTCGTGTCTCTGTGTGGTGGGAGGGGAAGGGAGGGGAAGGGGGTTATGA
AGAAGCCATGAGTATTGATTTTTCTACATGAAAGCTCAGACCAAACAAAT
AATGGTCAGACGTAATCCGTCAAAGACACCGGAAGACAATAGAGCTGGCT
GTGTCGTATAACAAGTGTGAGTTTGTGTAAATTGCTTTATCAAATGAGGA
AATAAAGTCCATGGATCGGACCGATGGCGTAGAGGAAGCTTGGGGGAAAG
GGGCAAGAAAAGCAACAGCGCCGCTCCTCTGCTTGATACCTTTTTGCACA
ATCAACAGCCTCTCCTTCCCTCCACTACGAAGTCTCACACGTGCTCCTCA
TGGCTGTCCTCTCCCATGCATGGTGATGGTATAGCATGCAGCTCTAAGCT
TTTGAGCGAGCGAGGTAGCGAGCTGGTGGATTCATCGCCTTCGCTGTCGC
GGACATCTTGGTCTCATGACTTAGCCCGCCTTCCTGATCCACCACTCACA
ACAACACTGGATACAAGGAGCAGCAGTAGGAGCAAGACAAGATTTTCTGT
GACTCGCGGGCAGTGGCTTGTCAGACAAACCGGAGTGAAGGGGAGATAAA
GGAAAAGAGCAATGGTGGCCATGTCTGTGGATGGACGCCGGCCATAGCTC
CATTTTGCTTCGTTTTTTTAAACAGAAGTCCTCTCGGCGGTGCCAGATCT
GTATTGTTACTCGTAGACTTCGCCTGCCTTTCCTCCCTTTGCCCCTCCCT
CCTCATCGACACAAGACAACATGAAAAGCATTTTACAGAACGTAAAGAAA
CGAGTGGGCGGCAGCAGCGGCAGCAACAGCAATAACATGTCAGGCTCACC
AGAAGCAGGGCACTCTCCCCCCTCCTCCTTTTCCTCTGCCGCCTCATCGA
GACTAGACGGCGGTGGTCATATCACGGGCGATTACATCTCACCAGCAGCA
ACGGCAGCAGCACATCATGGAATGACAGCAGCAGCAGCAGCAGGAGGAGG
AGGAGGGGGTGGTTTGGACGGGGAGGGCCATGCGGCGTGCTTGCCGCACA
GTAGCTTGTTGTCTTTGTCGCCCACGTCGGGCGCAGCGCAGTTGGCTGCC
CAAGCTATAGCCGAGGGCACACCACGGGCTGACCCCACCCTCCCTCGTCA
CACCCCTCAACGTCGTCGTTCCTCCCTCATCCGCAACCAGCAGCGGATGG
CAGCATTGAAAGACCTGCCGATGTTACGGGACACGAGCGCCGCCCGTCGT
GAGGCTCTTTTTCAACAGAAGCTGCAGCTGTGTGCGGTCGTCTTCAACTT
TGATGATCCGCAGGCGGACAAGAAGGGGAAAGATATGAAGCGACAAACAC
TCCTCGAGCTCGTGGATTTTATCAACACACCCGCCGGCCAGAAAATCTTC
ACAGAAAGCCTCATGCCAGACATCATGGCATGTGTCACCGCCAACATCTG
TCGCTCCCTCCCTCCCCAAACGGAAGACTTTGATCCGGAGGAAGACGACC
CGATCCTCGAGCCCTCTTGGCCTCATCTCCAGGTTGTGTACGAGTTCTTC
CTTCGCTTCGTCGTCTCCACGGAGGTCAATGCAAAGACGGCCAAGAAATA
CGTCGACCAACGGTTCTGCGCCTCGCTCATCGAACTGTTCGACAGCGAAG
ACCCTCGTGAGCGCGACTACCTCAAAACCATCCTCCATCGCATCTACGGG
AAATTCATGTCCCATCGGTCCTTCATACGTAAGGCCATCAGCTCCGTCTT
CTTCCGCTTTGTCTACGAGACGGAGCACCACAACGGCATTGCCGAGCTGC
TCGAAATCCTCGGTTCTATCATCAACGGTTTCGCCATCCCTCTAAAAAAG
GAACATCTGCACTTCCTCGAGCGTGCCCTGCTCCCACTCCACAAACCCAA
GTGCGTGGCGCTCTACCACCAGCAGCTCTCCTACTGCATCATACAGTACA
TCGAGAAGGACCCAAACACTGCCGTTGCTGTGCTTCAAGGTATAGTCCGC
TTCTGGCCCTGGTCGTGCTCGTCGAAGCAGGTGCTCTTCCTCAATGAATT
AGAGGAAATCCTCGAGCTTCTAGGAATGGATCAACTACTGCAGGTCCGTG
AAACGCTCTTCCGCCTCATCGCGAAGTGCCTGGGCTCCCATCACTTTCAA
GTGGCAGAGCGCGCCCTCTTTCTGTGGAACAACGAAAACCTCGTCAATAC
CGGATGCCTCTCGCGGCAGCATGCCAGCGTCATCCTCCCCCTCATCTACG
GTCCTCTTTACCGTAATTCTGCCGATCACTGGAATGCCACTGTCGAGAGT
CTCGCCCAAAACGTCCTGAAAATGTACATGGAGTATGATTTTGCTCTGTA
CGATCAATGCGCGACAGAGTACCTGCGGCTGGAGGAAGAGAGGGAGCACA
AGGCGGAGGAGAGCGCGAAGAAATGGGAAGCCATTGCCAGGCTTGCGGCG
TCGGCGCAGCAGGTGTAGGAAGAGAAGGAAGGAGGGAGGGAGGGGGGGTT
GGGATGCCGCGGAGTATTTGTGGCTGGAGAAGATGTAGAGCCCCCCCTTA
CCCCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGGGAACGGAGAGGT
AGAGAAGGGAGCGTGCGAGGAGGGAGATGAAAAAGTATGGTGGCTCACGG
TGAATAAGAGGAGGGCGAAAGGGAGGGAGGGAGGGAGGGAGGAGTGGATC
GATTGTGGTGACCATAAAGAGGAGGAAAGGGGAAGGCAAAGAATTGATGA
CAAGAAGTGTTAAAGGTAAGAGAGAAAGAGGGAAGGGAGTGGAATGAAAG
CAATGGGATTGCAACAAAGAAGGAGAAGAAGAAGGAATAGGCAGTGAGAT
TGTACGACAGGAGACAGGGGATGGGCGAAAGGGGACGTAGAAGAAGAGGG
GGAGGATTAAAGAAGGAGAATGAGAAGAAAAAGTAAAGTAGAGGAAGAAA
GATTAGAGGAAGAAGAAGAGGAAGAAGAAGAAAAACTATCACATGGAGAA
GAGGAGGGGAAGAAGGAGAAGAATCGCCATCACCGAGGGGCGGAATGGAT
CACGGAATTGAGCATCATGGTAGCCCCCCCCCCCATTTGAAGGCCTTATC
GCTTGTCACCAGGATATTGGACAAAAACGAAATATTTCGTAAAGTAAGAC
GATTTGCGATGCAAGACAGTCACCACTGTGCTCGGAAAGACGTAAGGAAG
CGAAAACCCGTGTCTTTATTTCAATCCATGGAGAACTTAGTGACCAAGGG
GTAGTCCTCTGTGGCAGCTTCTGACATGGCTGACCGATCCGCCCACTTCA
AGTTCAAGCGTCGTAAATGCCCCCAACACCAGGCCATAAACATCGATTTT
TAATGATATAAAGGGTG

protein sequence of NO28G00430.1

>NO28G00430.1-protein ID=NO28G00430.1-protein|Name=NO28G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=566bp
MKSILQNVKKRVGGSSGSNSNNMSGSPEAGHSPPSSFSSAASSRLDGGGH
ITGDYISPAATAAAHHGMTAAAAAGGGGGGGLDGEGHAACLPHSSLLSLS
PTSGAAQLAAQAIAEGTPRADPTLPRHTPQRRRSSLIRNQQRMAALKDLP
MLRDTSAARREALFQQKLQLCAVVFNFDDPQADKKGKDMKRQTLLELVDF
INTPAGQKIFTESLMPDIMACVTANICRSLPPQTEDFDPEEDDPILEPSW
PHLQVVYEFFLRFVVSTEVNAKTAKKYVDQRFCASLIELFDSEDPRERDY
LKTILHRIYGKFMSHRSFIRKAISSVFFRFVYETEHHNGIAELLEILGSI
INGFAIPLKKEHLHFLERALLPLHKPKCVALYHQQLSYCIIQYIEKDPNT
AVAVLQGIVRFWPWSCSSKQVLFLNELEEILELLGMDQLLQVRETLFRLI
AKCLGSHHFQVAERALFLWNNENLVNTGCLSRQHASVILPLIYGPLYRNS
ADHWNATVESLAQNVLKMYMEYDFALYDQCATEYLRLEEEREHKAEESAK
KWEAIARLAASAQQV*

mRNA from alignment at chr28:164756..171589+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO28G00430.1 ID=NO28G00430.1|Name=NO28G00430.1|organism=Nannochloropsis oceanica|type=mRNA|length=6834bp|location=Sequence derived from alignment at chr28:164756..171589+ (Nannochloropsis oceanica)
CGTTTTTTCACCAGCGATTTTTCTTCTTGTCTTGGCTTTCCTTGTCATTT
CTTTATTTCTCTTTGGAGACCCCTCTTTTTATCGCATTTTTTTTTCTCAT
TTATTCAGTCATGCAAAAATACTTTGTATGAACTGTCTATATCTATCCAG
GGACCCCACTAGCAGCTCCTTCCTCGCTTCCTCGGCCATTTCCACCACCC
ACTCGAGATTATGCACAAAGAGCACCACCTCCCCGAGTATCTCACGACAC
AGTAATAAATGGTGGATATACGCCCTAGAATGGGGTGTGCGGCAGGCGAG
GCACCCACACCCTTCCCTTAAGGCCCTCGCGTCCTTCCTCCATTTCCGAT
CCCATAAATTTATTATCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCTTCCCCCTTCACACCTTCCTCCCTCCGGGTCCTCTTCCT
CGGCCGTCTTTTCCCCTCCCTTCCATCCTTCCGACCCTCATTCTTCACCC
TCCCCACCAACGCATGTCCCTCCCTCGTTAAAAGTAACGGTAAAGGGCAG
GCGACGACATCCACTCCTGCGGCAACCGCACTCAGCACGTCCTCCATCCC
TCCCTGCCCTGCCACCGCCATGCGAAGCCAGGAGGGAGGGAGCGAGGAAA
TGACAGTATTGTAGACAGAAAGTCGAGCAGCCGCCGTCTCGCCGAGTCCC
AGGCCACCGAGAACAACTCCGAGGATCGGGGAGGGAGGGAGGGAGGGAGG
AAGGGCGATCTTGTCGAGGGTGAGGCGGACGCTGTGTGAGCGCATCTTCA
GGTCTGATCCTCCCACGATTCCAGCCAACAAGAAAGGGCTCTTGCGACGT
ATTCCCGCGCTGGATTTTCCTTCCTCCCCTCCTCCTTCTGACTGAGGGAG
GAAGGGAAGGAGGGCGAGGTCTTCAACCCACCTGGCTGTGCGTTCGACAG
CCTTTTGTTGTCTTGTTCTACTAGCGTCTTCGGGAGCCTCGTCCATGATG
GATACTGCCATGGAAACGAGGGAGGGAGGAGGGAAGGGAGGGAGGGCATC
GGCCGTGGGGTCGCAGGAGGGAGGGAGGGAGGGAGGGAAGGCGAGGGAGG
CGATGAGTGCGCGGTAGGAGGAGGGGGTGAGGGATTTTCGGCCGTTGGAT
GTGTCGAAACTGACTTGATTGAAATTGCAGCTGGCAGGAGGAAGGGTTAG
GGGCGCGCTTCCCCCTCCCCGGAGGGAGAGACAGGTGGGAAGGAGTGGGA
GAAGAGAGGGAGGGAGGGTGGGGGGGAGGGAGGGGAGGTTGTCCTTGATG
GGAAGGCAGTCTCTCACGTCCATGAGAAAGAGACCAAAGGAGTGGGGGTG
GCGTGTATGTAGGTCTAGCAAAAGGTCTGGGGTGAGGTAGGGAGGGGCGC
CGTGCTCGGTGGGGAGGGCGAGGAGGGGTGTGTGGAGGGGGAGGGAGGAG
GGACGAGAGCCTAGGTGAAGGAGGCCGGCGCGAGGGCTGAGAGTGCTGGC
ATCGTTCGATGCTGGAGGGTATACAACCTGGAAAGGCATTGTAATAGAAG
GTCTGTGCTGTTCTGCCGCGGCTTGTGGTGGCGATGTAGACATCGTGGGA
CTTCGTGTCTCTGTGTGGTGGGAGGGGAAGGGAGGGGAAGGGGGTTATGA
AGAAGCCATGAGTATTGATTTTTCTACATGAAAGCTCAGACCAAACAAAT
AATGGTCAGACGTAATCCGTCAAAGACACCGGAAGACAATAGAGCTGGCT
GTGTCGTATAACAAGTGTGAGTTTGTGTAAATTGCTTTATCAAATGAGGA
AATAAAGTCCATGGATCGGACCGATGGCGTAGAGGAAGCTTGGGGGAAAG
GGGCAAGAAAAGCAACAGCGCCGCTCCTCTGCTTGATACCTTTTTGCACA
ATCAACAGCCTCTCCTTCCCTCCACTACGAAGTCTCACACGTGCTCCTCA
TGGCTGTCCTCTCCCATGCATGGTGATGGTATAGCATGCAGCTCTAAGCT
TTTGAGCGAGCGAGGTAGCGAGCTGGTGGATTCATCGCCTTCGCTGTCGC
GGACATCTTGGTCTCATGACTTAGCCCGCCTTCCTGATCCACCACTCACA
ACAACACTGGATACAAGGAGCAGCAGTAGGAGCAAGACAAGATTTTCTGT
GACTCGCGGGCAGTGGCTTGTCAGACAAACCGGAGTGAAGGGGGTAAGGT
TTGCTTGCTTCTACATAAGCGGGAGGGTGGAGGCTTTTATAAACTGCCCT
CCTTCTCCTCACTCAATCTCACCCTCTTTTCCCCACCAAACCCACACGTT
TCGTTACAGAGATAAAGGAAAAGAGCAATGGTGGCCATGTCTGTGGATGG
ACGCCGGCCATAGCTCCATTTTGCTTCGTTTTTTTAAACAGAAGTCCTCT
CGGCGGTGCCAGATCTGTATTGTTACTCGTAGACTTCGCCTGCCTTTCCT
CCCTTTGCCCCTCCCTCCTCATCGACACAAGACAACATGAAAAGCATTTT
ACAGAACGTAAAGAAACGAGTGGGCGGCAGCAGCGGCAGCAACAGCAATA
ACATGTCAGGCTCACCAGAAGCAGGGCACTCTCCCCCCTCCTCCTTTTCC
TCTGCCGCCTCATCGAGACTAGACGGCGGTGGTCATATCACGGGCGATTA
CATCTCACCAGCAGCAACGGCAGCAGCACATCATGGAATGACAGCAGCAG
CAGCAGCAGGAGGAGGAGGAGGGGGTGGTTTGGACGGGGAGGGCCATGCG
GCGTGCTTGCCGCACAGTAGCTTGTTGTCTTTGTCGCCCACGTCGGGCGC
AGCGCAGTGTAAGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGGTGAAAGA
GGGAGCAAGTGAGTGAGTGAGCGAATGCGTGAGTGAGTGAGGGAGGGAGA
AATGGCTATGTATCTATGACTGATGATAGTGACGCGATCCTCCCTTCCTC
CCTCCCTCCCTTCCTCCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCTAAGTGGCTGCCCAAGCTATAGCCGAGGGCACACCA
CGGGCTGACCCCACCCTCCCTCGTCACACCCCTCAACGTCGTCGTTCCTC
CCTCATCCGCAACCAGCAGCGGATGGCAGCATTGAAAGACCTGCCGATGT
TACGGGACACGAGCGCCGCCCGTCGTGAGGCTCTTTTTCAACAGAAGCTG
CAGCTGTGTGCGGTCGTCTTCAACTTTGATGATCCGCAGGTATAGGGTCT
CAACTTCCCCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCGGAGAAGAAGGGGAAAGACATGAAGCGACAAACA
CTCCTCAAATTCACCCTCCCTTCTTCCCTCCCTCCCTCCCTCCCTCCCTT
ACCCCTCACATTCTCAGGCGGACAAGAAGGGGAAAGATATGAAGCGACAA
ACACTCCTCGAGCTCGTGGATTTTATCAACACACCCGCCGGCCAGAAAAT
CTTCACAGAAAGCCTCATGCCAGGTTCGCCCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCTTCATCGCATCCACCTTCTCGAGCCCGTCATTCTGAC
CCCCTTCCCCTCCACCTTCCCGCCTCCTCCCCAAAACCGTCCCCCCCCTC
CCTCCCTCCCTCCCTCCCCCTAGACATCATGGCATGTGTCACCGCCAACA
TCTGTCGCTCCCTCCCTCCCCAAACGGAAGACTTTGATCCGGAGGAAGAC
GACCCGATCCTCGAGCCCTCTTGGCCTCATCTCCAGGCACGCCCTCCCTC
CCTCCCTCCCCCCTCCCACCTTCGCGGTCCAGTCAATGGGAAATCCGCGA
CTCACCCACTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGTTGTG
TACGAGTTCTTCCTTCGCTTCGTCGTCTCCACGGAGGTCAATGCAAAGAC
GGCCAAGAAATACGTCGACCAACGGTGAGGGAGGCAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGTTGAAGGGAGGGAGGGAGGGAGGGAAGGAAGGG
CTTGTGTCATATGGATGGGCTTGCCGAGGCAGCCACGGCGCACATGCTCG
CGTATCCTGACTCTTCCTCCCTCCCTCCCTCCCTCCCTCTTCCTCCACAG
GTTCTGCGCCTCGCTCATCGAACTGTTCGACAGCGAAGACCCTCGTGAGC
GCGACTACCTCAAAACCATCCTCCATCGCATCTACGGGAAATTCATGTCC
CATCGGTCCTTCATACGTAAGGCCATCAGCTCCGTCTTCTTCCGCTTTGT
CTACGAGACGGAGCACCACAACGGCATTGCCGAGCTGCTCGAAATCCTCG
GTGAGTCGCCTGAGCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCT
CTCCTTCCCTCGTTTTTCCAAACATACTGCCCCCCTCCCTCCCCCCCTCC
CTCTTCAAGGTTCTATCATCAACGGTTTCGCCATCCCTCTAAAAAAGGAA
CATCTGCACTTCCTCGAGCGTGCCCTGCTCCCACTCCACAAACCCAAGGT
ATCACCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTTTCTCCGCCTCCTCGAACGTTGCTTGTGCCAGGCC
ATGCGCCACCGGCCAAGGCGGGAGGGAGGGAGGGAGGGAGGGTGGGAGGT
ACACTCGCAAAGGGCGTCATCAGGACATGAACGCCTCCCTCCCTCCCTCC
CTCTCTCCCTCCCTCCCCCCTCCCGCAGTGCGTGGCGCTCTACCACCAGC
AGCTCTCCTACTGCATCATACAGTACATCGAGAAGGACCCAAACACTGCC
GTTGCTGTGCTTCAAGGTATAGTCCGCTTCTGGCCCTGGTCGTGCTCGTC
GAAGCAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGTGAC
ATTTGTTTCTCTGTCCCCCCTGTATTGCTGACCCTCCCTCCCTCCCTCCC
TCTCTCTCCCCTTCCCTCCCTCGTTCCTCCCTCAGGTGCTCTTCCTCAAT
GAATTAGAGGAAATCCTCGAGCTTCTAGGAATGGATCAACTACTGCAGGT
AGGGAGCGAGGCAGGGAGGCAGGGAGGCAGGGAGGGAGGGATGGAGGGAG
GGAGGAAGGAAGCCATCAAACATCTGGATGTACGTCTCCTCACACCCTCT
CTCCCTCATACTCGCCCACCCTACCTCTCTCCCTCCCTCTCTTCCCACAG
GTCCGTGAAACGCTCTTCCGCCTCATCGCGAAGTGCCTGGGCTCCCATCA
CTTTCAAGTGGCAGAGCGCGCCCTCTTTCTGTGGAACAACGAAAACCTCG
TCAATACCGGATGCCTCTCGCGGCAGCATGCCAGGTACGCCTTCCCTCCC
TCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTC
CCTCGCGCCCTCCGACGTGCATGAGTATGCGACCCGTTCCCACCACTCAC
TCACTCCCTCACTCCCTCCCTCCCTCTTTCAGCGTCATCCTCCCCCTCAT
CTACGGTCCTCTTTACCGTAATTCTGCCGATCACTGGAATGCCACTGTCG
AGAGTCTCGCCCAAAACGTCCTGAAAATGTACGAAGCCTTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCTGCTTCTCCCTCG
TGTCTACCTCCCCGAGCCCGCCATTCTGACACTCATCCCTCCATGTCCCC
ATGCCTCTCTTCCTTTCTCCCTCCCTCCCTCCCTCTCCAGGTACATGGAG
TATGATTTTGCTCTGTACGATCAATGCGCGACAGAGTACCTGCGGCTGGA
GGAAGAGAGGGAGCACAAGGCGGAGGAGAGCGCGAAGAAATGGGAAGCCA
TTGCCAGGCTTGCGGCGTCGGCGCAGCAGGTGTAGGAAGAGAAGGAAGGA
GGGAGGGAGGGGGGGTTGGGATGCCGCGGAGTATTTGTGGCTGGAGAAGA
TGTAGAGCCCCCCCTTACCCCCCTTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTGGGAACGGAGAGGTAGAGAAGGGAGCGTGCGAGGAGGGAGATGAAAA
AGTATGGTGGCTCACGGTGAATAAGAGGAGGGCGAAAGGGAGGGAGGGAG
GGAGGGAGGAGTGGATCGATTGTGGTGACCATAAAGAGGAGGAAAGGGGA
AGGCAAAGAATTGATGACAAGAAGTGTTAAAGGTAAGAGAGAAAGAGGGA
AGGGAGTGGAATGAAAGCAATGGGATTGCAACAAAGAAGGAGAAGAAGAA
GGAATAGGCAGTGAGATTGTACGACAGGAGACAGGGGATGGGCGAAAGGG
GACGTAGAAGAAGAGGGGGAGGATTAAAGAAGGAGAATGAGAAGAAAAAG
TAAAGTAGAGGAAGAAAGATTAGAGGAAGAAGAAGAGGAAGAAGAAGAAA
AACTATCACATGGAGAAGAGGAGGGGAAGAAGGAGAAGAATCGCCATCAC
CGAGGGGCGGAATGGATCACGGAATTGAGCATCATGGTAGCCCCCCCCCC
CATTTGAAGGCCTTATCGCTTGTCACCAGGATATTGGACAAAAACGAAAT
ATTTCGTAAAGTAAGACGATTTGCGATGCAAGACAGTCACCACTGTGCTC
GGAAAGACGTAAGGAAGCGAAAACCCGTGTCTTTATTTCAATCCATGGAG
AACTTAGTGACCAAGGGGTAGTCCTCTGTGGCAGCTTCTGACATGGCTGA
CCGATCCGCCCACTTCAAGTTCAAGCGTCGTAAATGCCCCCAACACCAGG
CCATAAACATCGATTTTTAATGATATAAAGGGTG

Coding sequence (CDS) from alignment at chr28:164756..171589+

>NO28G00430.1 ID=NO28G00430.1|Name=NO28G00430.1|organism=Nannochloropsis oceanica|type=CDS|length=1698bp|location=Sequence derived from alignment at chr28:164756..171589+ (Nannochloropsis oceanica)
ATGAAAAGCATTTTACAGAACGTAAAGAAACGAGTGGGCGGCAGCAGCGG
CAGCAACAGCAATAACATGTCAGGCTCACCAGAAGCAGGGCACTCTCCCC
CCTCCTCCTTTTCCTCTGCCGCCTCATCGAGACTAGACGGCGGTGGTCAT
ATCACGGGCGATTACATCTCACCAGCAGCAACGGCAGCAGCACATCATGG
AATGACAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGGGGTGGTTTGGACG
GGGAGGGCCATGCGGCGTGCTTGCCGCACAGTAGCTTGTTGTCTTTGTCG
CCCACGTCGGGCGCAGCGCAGTTGGCTGCCCAAGCTATAGCCGAGGGCAC
ACCACGGGCTGACCCCACCCTCCCTCGTCACACCCCTCAACGTCGTCGTT
CCTCCCTCATCCGCAACCAGCAGCGGATGGCAGCATTGAAAGACCTGCCG
ATGTTACGGGACACGAGCGCCGCCCGTCGTGAGGCTCTTTTTCAACAGAA
GCTGCAGCTGTGTGCGGTCGTCTTCAACTTTGATGATCCGCAGGCGGACA
AGAAGGGGAAAGATATGAAGCGACAAACACTCCTCGAGCTCGTGGATTTT
ATCAACACACCCGCCGGCCAGAAAATCTTCACAGAAAGCCTCATGCCAGA
CATCATGGCATGTGTCACCGCCAACATCTGTCGCTCCCTCCCTCCCCAAA
CGGAAGACTTTGATCCGGAGGAAGACGACCCGATCCTCGAGCCCTCTTGG
CCTCATCTCCAGGTTGTGTACGAGTTCTTCCTTCGCTTCGTCGTCTCCAC
GGAGGTCAATGCAAAGACGGCCAAGAAATACGTCGACCAACGGTTCTGCG
CCTCGCTCATCGAACTGTTCGACAGCGAAGACCCTCGTGAGCGCGACTAC
CTCAAAACCATCCTCCATCGCATCTACGGGAAATTCATGTCCCATCGGTC
CTTCATACGTAAGGCCATCAGCTCCGTCTTCTTCCGCTTTGTCTACGAGA
CGGAGCACCACAACGGCATTGCCGAGCTGCTCGAAATCCTCGGTTCTATC
ATCAACGGTTTCGCCATCCCTCTAAAAAAGGAACATCTGCACTTCCTCGA
GCGTGCCCTGCTCCCACTCCACAAACCCAAGTGCGTGGCGCTCTACCACC
AGCAGCTCTCCTACTGCATCATACAGTACATCGAGAAGGACCCAAACACT
GCCGTTGCTGTGCTTCAAGGTATAGTCCGCTTCTGGCCCTGGTCGTGCTC
GTCGAAGCAGGTGCTCTTCCTCAATGAATTAGAGGAAATCCTCGAGCTTC
TAGGAATGGATCAACTACTGCAGGTCCGTGAAACGCTCTTCCGCCTCATC
GCGAAGTGCCTGGGCTCCCATCACTTTCAAGTGGCAGAGCGCGCCCTCTT
TCTGTGGAACAACGAAAACCTCGTCAATACCGGATGCCTCTCGCGGCAGC
ATGCCAGCGTCATCCTCCCCCTCATCTACGGTCCTCTTTACCGTAATTCT
GCCGATCACTGGAATGCCACTGTCGAGAGTCTCGCCCAAAACGTCCTGAA
AATGTACATGGAGTATGATTTTGCTCTGTACGATCAATGCGCGACAGAGT
ACCTGCGGCTGGAGGAAGAGAGGGAGCACAAGGCGGAGGAGAGCGCGAAG
AAATGGGAAGCCATTGCCAGGCTTGCGGCGTCGGCGCAGCAGGTGTAG

Synonyms

Publications