NO28G00150.1, NO28G00150.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO28G00150.1
Unique Name	NO28G00150.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3366
Alignment location	chr28:60376..65535 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr28	genome	chr28:60376..65535 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO28G00150.1 vs.
Match: CBJ32983.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 269.6 bits (688), Expect = 4.100e-68
Identity = 224/608 (36.84%), Postives = 296/608 (48.68%), Query Frame = 0

Query:  471 GGTKRPTMSAWAKGTGFGGNAGEGYYAHEEIEGEYDEYEGDEEDDDGEGWGGGGGGGGGGGGGEMEEEEEQRKRLLGGPFAHNVMPATTTAAAAAAA-------------------AAPMTPPSLP-----ASSVPLLELLRLWLRNDSLVDVSARKKVYTALLDVVQALSRHPFLAPSLTMPLADDHDGITEEEGGREGGREGGRKGGSILASLGRLQTQATYFQRCGGRTGESMSKKEEEAMVDDLLLFTKVSDTHEMIQGQLQRHQERYFLEFKAFNAVEGKLVSESTQAAAAVCRTQGGKGGVKGARAALVALLSG-GGGGGDKGANTQEKEKAAA--------QARYAHILGALRFESLPLLALVQGRKTTYSFMPQINASAAQGSMAQRRTVHIMREVAALSTSLPVEYGSGIFVRVDEERPDALKALITGPAGTPYSFGCFEFDIFLPTNYPASPPSVKFLTTGGGTWRCNPNLYQCGKVCLSLLGTWSGPGWNPAKSTLLQVLVSIQSLIFVPDPYFNEPGYQRSMGTPSGIVASNHYNQAVRFGTLHHAILNQMRFPSP-VFKDVCLKHFALKKTEILSQC-QKWMKEGGPRAGTTART 1044
            GG   P       G G G   G G+ A     GE   +        G+G+G  GGGGGGGGGG  +   +  K    G        A+T A AA A                    A   +P  LP          LL+ +  +LRNDSL+D++ R+K+Y +L  +V   ++H  LAP +           TE E        G     S     G+ +  +       G  GE  +++E+E +    LL +         Q       +       AF A++   V +  +A+    R   G    + +  A++AL S  G GGG  GA    K K  A        ++RY   LG  RFE + LL    G   ++ F  Q ++    G+  + R V I +EV+ L+TSLPV+  S IF+RVDE+R D ++A+ITGP GTPY  GCFEFDI LP +YP SPP V FLTTG G  R NPNLYQ GKVCLSLLGTW+GPGWNP  STLLQVL+SIQSLIFV +PYFNEPG++  +GTP G VAS+ YN  +R GTL   +L  +    P    DV   HF L K        Q + + GG  AG   +T
Sbjct:  334 GGYVYPGGRGGGGGRGMGAGRGAGWAALMAGFGELGGF--------GQGYGYNGGGGGGGGGGAPKISSKWSKGTGYGGSGDAAAAASTQAVAAEAEGRADKAMVVIFDALTGCLPATGDSPEHLPELLALVRESSLLQTVCAYLRNDSLMDIAKRRKLYQSLFKLVLGFAQHELLAPLIDHVPPKSGGAKTELEASATSSGSGDADSSSGKGK-GKGRASSDEDLAVAGADGEGDAEEEDEDVSVAELLASANRQAKVFAQAPGAGDGKGGDAGTLAF-ALQVTEVYDKVKASLTYLR---GIAEARASSPAVLALASAMGAGGGVAGAGLGRKRKREAADIVEVSLESRYLSELGDSRFELMALL----GPGHSHHFSGQASSQTG-GAGGRVRAVRISQEVSTLATSLPVQPDSSIFLRVDEDRFDVMRAMITGPKGTPYECGCFEFDILLPPDYPNSPPKVHFLTTGSGRVRFNPNLYQTGKVCLSLLGTWAGPGWNPKTSTLLQVLISIQSLIFVAEPYFNEPGFEGQLGTPQGRVASSSYNTRIRNGTLLLGVLEALEEKRPGALSDVKRTHFRLMKGGGRGGAFQTYPRGGGEGAGFGEKT 923

The following BLAST results are available for this feature:

BLAST of NO28G00150.1 vs.

BLAST of NO28G00150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ32983.1	4.100e-68	36.84	conserved unknown protein [Ectocarpus siliculosus]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO28G00150	NO28G00150	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO28G00150.1	NO28G00150.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO28G00150.1.cds1	NO28G00150.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds2	NO28G00150.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds3	NO28G00150.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds4	NO28G00150.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds5	NO28G00150.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds6	NO28G00150.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds7	NO28G00150.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds8	NO28G00150.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds9	NO28G00150.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds10	NO28G00150.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO28G00150.1.cds11	NO28G00150.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr28:60376..65535-
coding sequence from alignment at chr28:60376..65535-

mRNA sequence

>NO28G00150.1 ID=NO28G00150.1|Name=NO28G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=3366bp
CCATAGCAGCAGGGAACAAGACGCTCAAAAACAATTTAGGGTTTTAGAAG
GGGTTTCAAGAGAGTCGAGAGGGCATTGCACACACATTTCACTGAAGCAC
GCACCTTGTCCCCCTCCCGCCCTCCCTCTTTGGTCCCCGGCATGCCTTGT
GCCGCCAAGAAGAAGGAGGTAGAGGAGGCAATCCTTGATCTGGTCAGCGA
CGAAGACAATGATAAGGGCATAAAGCCGCAGTCTAGGGCGTCACAAACAC
GAACAAGGGGAAAAGGGGGGAGGGGAGGTCAGAATGGAGGAAAAGGAGGA
GCAGGAGGAGGCGACGGCGGCGATCGTGGAAGGAAGGACATGATCAATCT
CCTCGACGACGACGACGAGGACGACAACGAGAGGGTCAACGAGGGCAATC
ACAGGAAGGAGGCTGCTGCGGCCTCTGCCTCGGCCTCCTACGCCTCCTCA
GGACATGAAAGGAAAGTCGCCACTGCAGCCGAGGCCACAGCCGTCGAAGA
CGACGAAGAAGAGGGAGAGAAGATAGAGAAAGGTGTTGCATCAAGCAGGC
AAGTTCGTGCTGCTACAGGTCGCGGAGGCCGTAAAAATAACGGAGCTGGT
CCTGGGCCTGCTGCCTCGCCCTTTACCTCATCCTCCTTCCCGCCCTCCTC
CTTCGCCTGTCTTGTCTGCGGAGGGGAAGAAGAACATCAAGTCGTCCGTC
TTGGACACTGCCAGCACGTGGTTTGCCTCGACTGTCTCGCCCCTCCTTCC
CTCTCTCCTTCGTCTTCAATCTCCTTACGTTGTCCGGTGGACTGCTGTCC
TTCCTCCTTGTTGGCATGCAGCGATATACTCTATTTCCTAACCCCACGCG
ATTATGACATCTACGCCCAGGCCTCCCTTCGTCGCTTCCTCCTCCTCCAT
CAACAGCAGCAGCCGCAGCAACAGCAATCGCAGCAACAGCAGTCTCAGCA
GCCGCGGCCTCAGAGTAATGGAGGAGGAGGAAGAGGAGGACGAGAAAGGG
GTATGCTCAGTTGGTCGTGTGAGAAGTGTGGAGAGCCGTTGGTAGAGGAG
GAAGAAGAGGACAAGGAGGGAGAGATAGAAGGAGGGGGGGCGATAGGGAA
AAATGGAGGGAGGAAGAAGAAAAGGCAGGGGAAGAAGAAGGAGGAGGATG
AGGAGGAGGTAGTGGTCGTGTCGGCAGTCGGGAAAAAGCGGGGCAGGGAG
GGCGGGAAGGCCTTGAGGGGGCGAGGGAGGCACGTTACGAGGACGAAGAG
GGCATTTTGGATGGAGGAATGGGAGGAGGATAGATTCGCCTTCGTGTCGT
GTAAGTCTTGTGACATCCGTGTCTGCAGATTGTGCGAGACGATTTTTCCA
GGGATGACGGAGGGAGGGAGAGAGGGAGAGAGGGAGGGAGGGCACAGGGA
GAAGTGTCCGTGTGTGCCTCTTTTGAAGACAGTCGCGTTGAACGAGAAGA
CTCGGGCATTGTTGGATGAGGAGGGAGGGAAGGCGAAAGCAGCCGCCGCA
ACAGCAACGGGGATAGCAAAAAAACCCAAGAAAACCCCGACGGCAGCGTG
GGGGGGGACAAAAAGGCCGACGATGAGCGCATGGGCGAAAGGGACGGGGT
TCGGCGGCAATGCCGGGGAAGGGTATTATGCGCACGAAGAAATAGAAGGA
GAATACGATGAGTACGAGGGAGACGAAGAAGACGATGATGGGGAGGGATG
GGGAGGTGGAGGAGGAGGAGGAGGAGGGGGAGGAGGGGGGGAGATGGAAG
AGGAGGAGGAGCAACGGAAACGGCTCCTCGGCGGTCCGTTCGCCCACAAC
GTTATGCCTGCTACTACTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTCC
TATGACCCCTCCTTCCCTCCCTGCCTCCTCCGTGCCCTTGCTGGAGTTGC
TCCGACTCTGGCTGAGGAATGATTCTCTGGTGGACGTATCAGCTAGAAAG
AAGGTCTACACGGCACTGCTGGACGTCGTCCAAGCCCTCTCTCGGCATCC
GTTCCTCGCCCCCTCCCTCACCATGCCACTCGCGGACGACCATGACGGCA
TTACAGAGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAG
GGAGGGTCGATCTTGGCGTCGTTGGGGAGATTGCAGACGCAAGCGACTTA
CTTCCAGAGGTGTGGAGGGCGGACGGGGGAAAGCATGAGCAAGAAAGAAG
AAGAGGCCATGGTGGATGATCTACTCCTCTTCACCAAGGTCTCTGACACC
CACGAAATGATCCAAGGGCAGCTCCAACGGCACCAGGAGAGGTACTTCCT
CGAGTTCAAAGCCTTTAATGCCGTCGAGGGGAAGCTTGTCAGCGAGAGCA
CACAGGCGGCTGCTGCTGTTTGTCGTACCCAAGGGGGAAAAGGGGGCGTG
AAAGGAGCCCGGGCAGCCTTGGTAGCCCTTCTTTCTGGAGGAGGAGGGGG
AGGTGATAAGGGTGCTAATACGCAGGAGAAGGAGAAGGCCGCAGCGCAGG
CCCGGTACGCACATATCCTCGGCGCCCTCCGCTTCGAGAGCCTCCCCCTC
CTTGCACTAGTTCAGGGGCGGAAGACTACCTATTCCTTTATGCCTCAAAT
CAACGCCAGCGCCGCGCAGGGAAGCATGGCCCAGAGACGCACTGTCCATA
TAATGCGCGAAGTCGCAGCGCTTTCCACCAGCTTGCCTGTGGAATATGGG
TCGGGAATCTTTGTTCGAGTCGACGAGGAACGCCCTGACGCATTGAAGGC
ACTCATCACAGGCCCCGCGGGCACGCCCTACAGCTTCGGCTGCTTCGAGT
TCGACATCTTCCTGCCCACCAACTACCCGGCCTCGCCGCCTTCCGTCAAG
TTCTTGACAACGGGCGGAGGGACGTGGAGGTGTAATCCCAACCTGTACCA
GTGTGGAAAAGTCTGCCTCTCTCTCCTCGGGACCTGGTCCGGTCCCGGCT
GGAATCCTGCGAAATCAACTCTGCTCCAAGTCCTCGTCAGCATCCAGTCC
CTCATCTTCGTGCCCGACCCGTACTTCAATGAGCCAGGGTACCAACGCTC
CATGGGTACTCCATCGGGGATCGTGGCTTCTAACCATTACAACCAAGCCG
TGCGTTTCGGTACTTTGCATCATGCAATTTTGAATCAGATGCGGTTTCCT
TCCCCTGTATTCAAGGATGTGTGTCTTAAGCATTTCGCGTTGAAAAAGAC
GGAGATTCTGTCTCAGTGTCAAAAATGGATGAAGGAGGGAGGACCACGGG
CAGGGACGACTGCGCGGACGGATACAGCGATGACGGTTCCGATGTGGCGA
TCTGTGTGCGGGGGAATCGAGCAGATTTATAAGACCAAGGAGGCTTCGAT
GTGGCTAGAGGGGTGA

protein sequence of NO28G00150.1

>NO28G00150.1-protein ID=NO28G00150.1-protein|Name=NO28G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1075bp
MPCAAKKKEVEEAILDLVSDEDNDKGIKPQSRASQTRTRGKGGRGGQNGG
KGGAGGGDGGDRGRKDMINLLDDDDEDDNERVNEGNHRKEAAAASASASY
ASSGHERKVATAAEATAVEDDEEEGEKIEKGVASSRQVRAATGRGGRKNN
GAGPGPAASPFTSSSFPPSSFACLVCGGEEEHQVVRLGHCQHVVCLDCLA
PPSLSPSSSISLRCPVDCCPSSLLACSDILYFLTPRDYDIYAQASLRRFL
LLHQQQQPQQQQSQQQQSQQPRPQSNGGGGRGGRERGMLSWSCEKCGEPL
VEEEEEDKEGEIEGGGAIGKNGGRKKKRQGKKKEEDEEEVVVVSAVGKKR
GREGGKALRGRGRHVTRTKRAFWMEEWEEDRFAFVSCKSCDIRVCRLCET
IFPGMTEGGREGEREGGHREKCPCVPLLKTVALNEKTRALLDEEGGKAKA
AAATATGIAKKPKKTPTAAWGGTKRPTMSAWAKGTGFGGNAGEGYYAHEE
IEGEYDEYEGDEEDDDGEGWGGGGGGGGGGGGGEMEEEEEQRKRLLGGPF
AHNVMPATTTAAAAAAAAAPMTPPSLPASSVPLLELLRLWLRNDSLVDVS
ARKKVYTALLDVVQALSRHPFLAPSLTMPLADDHDGITEEEGGREGGREG
GRKGGSILASLGRLQTQATYFQRCGGRTGESMSKKEEEAMVDDLLLFTKV
SDTHEMIQGQLQRHQERYFLEFKAFNAVEGKLVSESTQAAAAVCRTQGGK
GGVKGARAALVALLSGGGGGGDKGANTQEKEKAAAQARYAHILGALRFES
LPLLALVQGRKTTYSFMPQINASAAQGSMAQRRTVHIMREVAALSTSLPV
EYGSGIFVRVDEERPDALKALITGPAGTPYSFGCFEFDIFLPTNYPASPP
SVKFLTTGGGTWRCNPNLYQCGKVCLSLLGTWSGPGWNPAKSTLLQVLVS
IQSLIFVPDPYFNEPGYQRSMGTPSGIVASNHYNQAVRFGTLHHAILNQM
RFPSPVFKDVCLKHFALKKTEILSQCQKWMKEGGPRAGTTARTDTAMTVP
MWRSVCGGIEQIYKTKEASMWLEG*

mRNA from alignment at chr28:60376..65535-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO28G00150.1 ID=NO28G00150.1|Name=NO28G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=5160bp|location=Sequence derived from alignment at chr28:60376..65535- (Nannochloropsis oceanica)
CCATAGCAGCAGGGAACAAGACGCTCAAAAACAATTTAGGGTTTTAGAAG
GGGTTTCAAGAGAGTCGAGAGGGCATTGCACACACATTTCACTGAAGCAC
GCACCTTGTCCCCCTCCCGCCCTCCCTCTTTGGTCCCCGGCATGCCTTGT
GCCGCCAAGAAGAAGGAGGTAGAGGAGGCAATCCTTGATCTGGTCAGCGA
CGAAGACAATGATAAGGGCATAAAGCCGCAGTCTAGGGCGTCACAAACAC
GAACAAGGGGAAAAGGGGGGAGGGGAGGTCAGAATGGAGGAAAAGGAGGA
GCAGGAGGAGGCGACGGCGGCGATCGTGGAAGGAAGGACATGATCAATCT
CCTCGACGACGACGACGAGGACGACAACGAGAGGGTCAACGAGGGCAATC
ACAGGAAGGAGGCTGCTGCGGCCTCTGCCTCGGCCTCCTACGCCTCCTCA
GGACATGAAAGGAAAGTCGCCACTGCAGCCGAGGCCACAGCCGTCGAAGA
CGACGAAGAAGAGGGAGAGAAGATAGAGAAAGGTGTTGCATCAAGCAGGC
AAGTTCGTGCTGCTACAGGTCGCGGAGGCCGTAAAAATAACGGAGCTGGT
CCTGGGCCTGCTGCCTCGCCCTTTACCTCATCCTCCTTCCCGCCCTCCTC
CTTCGCCTGTCTTGTCTGCGGAGGGGAAGAAGAACATCAAGTCGTCCGTC
TTGGACACTGCCAGCACGTGGTTTGCCTCGACTGTCTCGCCCCTCCTTCC
CTCTCTCCTTCGTCTTCAATCTCCTTACGTTGTCCGGTGGACTGCTGTCC
TTCCTCCTTGTTGGCATGCAGCGATATACTCTATTTCCTAACCCCACGCG
ATTATGACATCTACGCCCAGGCCTCCCTTCGTCGCTTCCTCCTCCTCCAT
CAACAGCAGCAGCCGCAGCAACAGCAATCGCAGCAACAGCAGTCTCAGCA
GCCGCGGCCTCAGAGTAATGGAGGAGGAGGAAGAGGAGGACGAGAAAGGG
GTATGCTCAGTTGGTCGTGTGAGAAGTGTGGAGAGCCGTTGGTAGAGGAG
GAAGAAGAGGACAAGGAGGGAGAGATAGAAGGAGGGGGGGCGATAGGGAA
AAATGGAGGGAGGAAGAAGAAAAGGCAGGGGAAGAAGAAGGAGGAGGATG
AGGAGGAGGTAGTGGTCGTGTCGGCAGTCGGGAAAAAGCGGGGCAGGGAG
GGCGGGAAGGCCTTGAGGGGGCGAGGGAGGCACGTTACGAGGACGAAGAG
GGCATTTTGGATGGAGGAATGGGAGGAGGATAGATTCGCCTTCGTGTCGT
GTAAGTCTTGTGACATCCGTGTCTGCAGATTGTGCGAGACGATTTTTCCA
GGGATGACGGAGGGAGGGAGAGAGGGAGAGAGGGAGGGAGGGCACAGGGA
GAAGTGTCCGTGTGTGCCTCTTTTGAAGACAGTCGCGTTGAACGAGAAGA
CTCGGGCATTGTTGGATGAGGAGGGAGGGAAGGCGAAAGCAGCCGCCGCA
ACAGCAACGGGGATAGCAAAAAAACCCAAGAAAACCCCGACGGCAGCGTG
GGGGGGGACAAAAAGGCCGACGATGAGCGCATGGGCGAAAGGGACGGGGT
TCGGCGGCAATGCCGGGGAAGGGTATTATGCGCACGAAGAAATAGAAGGA
GAATACGATGAGTACGAGGGAGACGAAGAAGACGATGATGGGGAGGGATG
GGGAGGTGGAGGAGGAGGAGGAGGAGGGGGAGGAGGGGGGGAGATGGAAG
AGGAGGAGGAGCAACGGAAAGTGAGACGCGGGCGAGGAAGAAGCAGGACA
CCCTCGACAATCAGGTCCTGGGGCTGATTGAAAAGGGCTGGTTACCCCTC
CTTTCCTCCTTACCCCCTCTCGCCCTCCCCCCCGCCCTCCAGCGGCTCCT
CGGCGGTCCGTTCGCCCACAACGTTATGCCTGCTACTACTACTGCTGCTG
CTGCTGCTGCTGCTGCTGCTCCTATGACCCCTCCTTCCCTCCCTGCCTCC
TCCGTGCCCTTGCTGGAGTTGCTCCGACTCTGGCTGAGGAATGATTCTCT
GGTGGACGTATCAGCTAGAAAGAAGGTGAGGGAGGGAGGGAGGGAGGGAG
GGCGGGGGGGAGGGAGGGCAGAGAGAGGGGCAGGTGCTTGCCGTGACTTA
ATTATACTGACCCCTATCGTTTCCTCATTCCCTCCTTTCCTCCCTTCCTC
CGTCCCTCCCTCTTTCCCTCCCTCAGGTCTACACGGCACTGCTGGACGTC
GTCCAAGCCCTCTCTCGGCATCCGTTCCTCGCCCCCTCCCTCACCATGCC
ACTCGCGGACGACCATGACGGCATTACAGAGGAGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGAAGGGAGGGTCGATCTTGGCGTCGTTGGGG
AGATTGCAGACGCAAGCGACTTACTTCCAGAGGTGTGGAGGGCGGACGGG
GGAAAGCATGAGCAAGAAAGAAGAAGAGGCCATGGTGGATGTACGTAGTC
CGCCCGCCCACCCTCCCTCCCTTCCTCCTTCCCTCCCTCGATGATGTTCG
CCTCACCAAGTCCGTCTTTTTGACACACTTATCTTCCTACTGTCCTTCAA
AAGATCACGCCACCTACTCACCGCACCCCTCCTCCCTCCCTCCCTCACTC
ACTCACTCACTCTTTCAGGATCTACTCCTCTTCACCAAGGTCTCTGACAC
CCACGAAATGATCCAAGGGCAGCTCCAACGGCACCAGGAGAGGTACTTCC
TCGAGTTCAAAGTAAGAAGGGAGGGGAAAGAGGGGGGAGGGAGTAGGGGA
GAGAGGGAGGGAGGAAAGAAATGTTTTTTATCAATGGAATCAATTTATTG
ATTTATTATTTGTTTATTTATGTTTATTTGGTTCATATATAGATTCATTC
GTCAATCCATGCCTCTTCATCTTTCTTCATGCAGGCCTTTAATGCCGTCG
AGGGGAAGCTTGTCAGCGAGAGCACACAGGCGGCTGCTGCTGTTTGTCGT
ACCCAAGGGGGAAAAGGGGGCGTGAAAGGAGCCCGGGCAGCCTTGGTAGC
CCTTCTTTCTGGAGGAGGAGGGGGAGGTGATAAGGGTGCTAATACGCAGG
AGAAGGAGAAGGCCGCAGCGCAGGTATGTCTTCTAATATATGCTTTCCGA
TCTCTTGATAACCACGACTTACCATCCTCCCCTCCCCCCTTCCTTCCCTC
CCACCCTTCCCTCTATCCCTCCCACGCCCACAGGCCCGGTACGCACATAT
CCTCGGCGCCCTCCGCTTCGAGAGCCTCCCCCTCCTTGCACTAGTTCAGG
GGCGGAAGACTACCTATTCCTTTATGCCTCAAATCAACGCCAGCGCCGCG
CAGGGAAGGTAAGCTTCCCTTCCTCCCTCCTTCCCTTCCTCCCTCCTTCC
CTTCCTCCCTCGCCACGCATGGAGAGTAGGCGCGCGACACATATCCTCTT
CCCTCTCTCCGCTTTCGTTTTCATGAAGCTAAAGAATGTAACCCGAACAT
ACCTTCCCTTCGGCCCTCCCTCCCTCCCTCTTTCCCCCCCTCCCTCCCTC
AGCATGGCCCAGAGACGCACTGTCCATATAATGCGCGAAGTCGCAGCGCT
TTCCACCAGCTTGCCTGTGGAATATGGGTCGGGTAAGGAGGCAGGGAGAA
GGAAGAGGAAGGGAGGGAGAGAGAAGAAATCTACGACTAAATCGTCGCTT
TCTTTTACACACTCACCCTTATGTTTCCTTGACATATATTCATGTTTGAT
TTTCATTTAAATGGTCTGGATCGTTATTTCCGTCTTCCACGCCAAATAGG
AATCTTTGTTCGAGTCGACGAGGAACGCCCTGACGCATTGAAGGTAAGCG
GAGCCAAGGAAGGAAGGCAGGAAGGGAGTGAGTGAGGGAGGGAAAGAAAA
GAGAGGGGGTATCAATCGAAGTGCTAGCTTTTGACATGGTTCCCTATCTT
TTCTCATCACATTTGCCAGCACGATCTTTCATGTGTCACACGCACCCAAT
CAACTACTTCCCCCAACCGACCCACGTACACACCCACACACTCCCAAAGG
CACTCATCACAGGCCCCGCGGGCACGCCCTACAGCTTCGGCTGCTTCGAG
TTCGACATCTTCCTGCCCACCAACTACCCGGCCTCGCCGCCTTCCGTCAA
GTTCTTGACAACGGGCGGAGGGACGTGGAGGTGTAATCCCAACCTGTACC
AGGTCTGTCTCCGTCTAGGACTCGCGTACTTTCCCTTTCCGCCCTTGAAT
ACGATTGTTCGTCTTCCTTTCTTTGCCTTTCTTTGCTTGCGCGTCTGGTG
TCCATAATTTCATTTCTGCCTTTTCGTTCATCCGGCACGCAGAATGAGGT
GGCCCTTCCATCATATCCCACCCTTCATTCAGGCACACCCACTCTTGTCT
CTCTCCATTCCCCCTCTCCTGCTGTAGTGTTGTGTCTCTCTCAAAGCCCT
TTCGGTCTGGAAAACCATGACACGCTGTATATATACACACACATATTTGT
CAAAGTTACTCACATTCCCCGCCCTTACAATACAGTGTGGAAAAGTCTGC
CTCTCTCTCCTCGGGACCTGGTCCGGTCCCGGCTGGAATCCTGCGAAATC
AACTCTGCTCCAAGTCCTCGTCAGCATCCAGTCCCTCATCTTCGTGCCCG
ACCCGTACTTCAATGAGGTACATACGCCAGACGCTATATGGATGCTGACT
CTTTTCTGACTTTCCCTCCTCCCTTCTTCGTGAGCTCAGTCTCCTTGTTG
ATCGCTTCTCTGCTGATAACCTTGGATCTCACCTTTTCTCTTTCCCTCCC
TCTCCACTTCCCTCCCTCCTTTCACAGCCAGGGTACCAACGCTCCATGGG
TACTCCATCGGGGATCGTGGCTTCTAACCATTACAACCAAGCCGTGCGTT
TCGGTACTTTGCATCATGCAATTTTGAATCAGATGCGGTTTCCTTCCCCT
GTATTCAAGGATGTGTGTCTTAAGCATTTCGCGTTGAAAAAGACGGAGAT
TCTGTCTCAGTGTCAAAAATGGATGAAGGAGGGAGGACCACGGGCAGGGA
CGACTGCGCGGACGGATACAGCGATGACGGTTCCGATGTGGCGATCTGTG
TGCGGGGGAATCGAGCAGATTTATAAGACCAAGGAGGCTTCGATGTGGCT
AGAGGGGTGA

Coding sequence (CDS) from alignment at chr28:60376..65535-

>NO28G00150.1 ID=NO28G00150.1|Name=NO28G00150.1|organism=Nannochloropsis oceanica|type=CDS|length=3225bp|location=Sequence derived from alignment at chr28:60376..65535- (Nannochloropsis oceanica)
ATGCCTTGTGCCGCCAAGAAGAAGGAGGTAGAGGAGGCAATCCTTGATCT
GGTCAGCGACGAAGACAATGATAAGGGCATAAAGCCGCAGTCTAGGGCGT
CACAAACACGAACAAGGGGAAAAGGGGGGAGGGGAGGTCAGAATGGAGGA
AAAGGAGGAGCAGGAGGAGGCGACGGCGGCGATCGTGGAAGGAAGGACAT
GATCAATCTCCTCGACGACGACGACGAGGACGACAACGAGAGGGTCAACG
AGGGCAATCACAGGAAGGAGGCTGCTGCGGCCTCTGCCTCGGCCTCCTAC
GCCTCCTCAGGACATGAAAGGAAAGTCGCCACTGCAGCCGAGGCCACAGC
CGTCGAAGACGACGAAGAAGAGGGAGAGAAGATAGAGAAAGGTGTTGCAT
CAAGCAGGCAAGTTCGTGCTGCTACAGGTCGCGGAGGCCGTAAAAATAAC
GGAGCTGGTCCTGGGCCTGCTGCCTCGCCCTTTACCTCATCCTCCTTCCC
GCCCTCCTCCTTCGCCTGTCTTGTCTGCGGAGGGGAAGAAGAACATCAAG
TCGTCCGTCTTGGACACTGCCAGCACGTGGTTTGCCTCGACTGTCTCGCC
CCTCCTTCCCTCTCTCCTTCGTCTTCAATCTCCTTACGTTGTCCGGTGGA
CTGCTGTCCTTCCTCCTTGTTGGCATGCAGCGATATACTCTATTTCCTAA
CCCCACGCGATTATGACATCTACGCCCAGGCCTCCCTTCGTCGCTTCCTC
CTCCTCCATCAACAGCAGCAGCCGCAGCAACAGCAATCGCAGCAACAGCA
GTCTCAGCAGCCGCGGCCTCAGAGTAATGGAGGAGGAGGAAGAGGAGGAC
GAGAAAGGGGTATGCTCAGTTGGTCGTGTGAGAAGTGTGGAGAGCCGTTG
GTAGAGGAGGAAGAAGAGGACAAGGAGGGAGAGATAGAAGGAGGGGGGGC
GATAGGGAAAAATGGAGGGAGGAAGAAGAAAAGGCAGGGGAAGAAGAAGG
AGGAGGATGAGGAGGAGGTAGTGGTCGTGTCGGCAGTCGGGAAAAAGCGG
GGCAGGGAGGGCGGGAAGGCCTTGAGGGGGCGAGGGAGGCACGTTACGAG
GACGAAGAGGGCATTTTGGATGGAGGAATGGGAGGAGGATAGATTCGCCT
TCGTGTCGTGTAAGTCTTGTGACATCCGTGTCTGCAGATTGTGCGAGACG
ATTTTTCCAGGGATGACGGAGGGAGGGAGAGAGGGAGAGAGGGAGGGAGG
GCACAGGGAGAAGTGTCCGTGTGTGCCTCTTTTGAAGACAGTCGCGTTGA
ACGAGAAGACTCGGGCATTGTTGGATGAGGAGGGAGGGAAGGCGAAAGCA
GCCGCCGCAACAGCAACGGGGATAGCAAAAAAACCCAAGAAAACCCCGAC
GGCAGCGTGGGGGGGGACAAAAAGGCCGACGATGAGCGCATGGGCGAAAG
GGACGGGGTTCGGCGGCAATGCCGGGGAAGGGTATTATGCGCACGAAGAA
ATAGAAGGAGAATACGATGAGTACGAGGGAGACGAAGAAGACGATGATGG
GGAGGGATGGGGAGGTGGAGGAGGAGGAGGAGGAGGGGGAGGAGGGGGGG
AGATGGAAGAGGAGGAGGAGCAACGGAAACGGCTCCTCGGCGGTCCGTTC
GCCCACAACGTTATGCCTGCTACTACTACTGCTGCTGCTGCTGCTGCTGC
TGCTGCTCCTATGACCCCTCCTTCCCTCCCTGCCTCCTCCGTGCCCTTGC
TGGAGTTGCTCCGACTCTGGCTGAGGAATGATTCTCTGGTGGACGTATCA
GCTAGAAAGAAGGTCTACACGGCACTGCTGGACGTCGTCCAAGCCCTCTC
TCGGCATCCGTTCCTCGCCCCCTCCCTCACCATGCCACTCGCGGACGACC
ATGACGGCATTACAGAGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGAAGGGAGGGTCGATCTTGGCGTCGTTGGGGAGATTGCAGACGCA
AGCGACTTACTTCCAGAGGTGTGGAGGGCGGACGGGGGAAAGCATGAGCA
AGAAAGAAGAAGAGGCCATGGTGGATGATCTACTCCTCTTCACCAAGGTC
TCTGACACCCACGAAATGATCCAAGGGCAGCTCCAACGGCACCAGGAGAG
GTACTTCCTCGAGTTCAAAGCCTTTAATGCCGTCGAGGGGAAGCTTGTCA
GCGAGAGCACACAGGCGGCTGCTGCTGTTTGTCGTACCCAAGGGGGAAAA
GGGGGCGTGAAAGGAGCCCGGGCAGCCTTGGTAGCCCTTCTTTCTGGAGG
AGGAGGGGGAGGTGATAAGGGTGCTAATACGCAGGAGAAGGAGAAGGCCG
CAGCGCAGGCCCGGTACGCACATATCCTCGGCGCCCTCCGCTTCGAGAGC
CTCCCCCTCCTTGCACTAGTTCAGGGGCGGAAGACTACCTATTCCTTTAT
GCCTCAAATCAACGCCAGCGCCGCGCAGGGAAGCATGGCCCAGAGACGCA
CTGTCCATATAATGCGCGAAGTCGCAGCGCTTTCCACCAGCTTGCCTGTG
GAATATGGGTCGGGAATCTTTGTTCGAGTCGACGAGGAACGCCCTGACGC
ATTGAAGGCACTCATCACAGGCCCCGCGGGCACGCCCTACAGCTTCGGCT
GCTTCGAGTTCGACATCTTCCTGCCCACCAACTACCCGGCCTCGCCGCCT
TCCGTCAAGTTCTTGACAACGGGCGGAGGGACGTGGAGGTGTAATCCCAA
CCTGTACCAGTGTGGAAAAGTCTGCCTCTCTCTCCTCGGGACCTGGTCCG
GTCCCGGCTGGAATCCTGCGAAATCAACTCTGCTCCAAGTCCTCGTCAGC
ATCCAGTCCCTCATCTTCGTGCCCGACCCGTACTTCAATGAGCCAGGGTA
CCAACGCTCCATGGGTACTCCATCGGGGATCGTGGCTTCTAACCATTACA
ACCAAGCCGTGCGTTTCGGTACTTTGCATCATGCAATTTTGAATCAGATG
CGGTTTCCTTCCCCTGTATTCAAGGATGTGTGTCTTAAGCATTTCGCGTT
GAAAAAGACGGAGATTCTGTCTCAGTGTCAAAAATGGATGAAGGAGGGAG
GACCACGGGCAGGGACGACTGCGCGGACGGATACAGCGATGACGGTTCCG
ATGTGGCGATCTGTGTGCGGGGGAATCGAGCAGATTTATAAGACCAAGGA
GGCTTCGATGTGGCTAGAGGGGTGA

Synonyms

Publications