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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr27 | genome | chr27:598926..603292 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO27G01780.1 vs.
Match: XP_005853369.1 (cytochrome p450 [Nannochloropsis gaditana CCMP526]; EKU22991.1 cytochrome p450 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 543.1 bits (1398), Expect = 1.100e-150 Identity = 275/360 (76.39%), Postives = 309/360 (85.83%), Query Frame = 0
Query: 265 MRFLTLEAVSQASFSLRLGLLEKDRGEGVVYR----------------TKDVSFSGRRVDRLVRDNFRLLGQSIRFPLPSSHRVGLNKPFNALQKVNAELMGIENAIIEGRRLERKQIRAEGGELPASRDLLDVYLEAIENEDLSLSNESIFRNINDIFMAGSDTTATTISASLYEIIRRPQIKTRVLAELANLDINDSAQMSPSVLSERLPFLDMCIRETLRLYPVAINLSRVAAKDTVLGGFKIPKGATVAPSVKNLHHDTAIWGPDAREYRPERWESERLEGGLPKGVPQGAYVPFGAGPRVCLGLRFALLEALTVCAVLLKELDLQPVDISRDLDVYYPAAMSFRGGVPVRVEGLR 609
MRFLTLEAVSQASFSL LGLL +DRGE + Y TK +SF+GRRVDRLVRDNFRLLG+SIRFPLP +HR+G NKP+N LQKVNAEL+GIENAIIEGRRLER++IR+EGG L ASRDLLDVYLEAIENEDL LSNESIFRN+NDIFMAGSDTTATTISASLYEI+RRP +K RVLAEL +LD++D MSPS L++RLPFLDMCI+ETLRL+PVA+NLSRVAA+DTVLGGF IPKGATVAP ++ LH DTA WGPDA E+RPERW SE LEGGLPKGVPQGAY+PFGAGPRVCLGLRFALLEA+TV LLK+LDL+ VD +RDLDVYYPAAMSFR GV +R+ GLR
Sbjct: 1 MRFLTLEAVSQASFSLPLGLLGRDRGESLEYSPVAHMSTPSSSYPSLSTKGLSFTGRRVDRLVRDNFRLLGESIRFPLPGAHRIGWNKPYNRLQKVNAELLGIENAIIEGRRLERERIRSEGGALTASRDLLDVYLEAIENEDLPLSNESIFRNLNDIFMAGSDTTATTISASLYEIVRRPDVKARVLAELESLDLSDPQAMSPSQLAQRLPFLDMCIKETLRLFPVAVNLSRVAARDTVLGGFHIPKGATVAPCIRLLHLDTATWGPDAAEFRPERWASENLEGGLPKGVPQGAYLPFGAGPRVCLGLRFALLEAMTVSVTLLKKLDLEVVDPNRDLDVYYPAAMSFRDGVQLRIGGLR 360
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO27G01780.1 ID=NO27G01780.1|Name=NO27G01780.1|organism=Nannochloropsis oceanica|type=mRNA|length=2086bp AAACACACAGGTACCATGCCCTCCACCCCCTTGCCGTCATCAAGCTCGTC CTGGCTGGGCCAGAGGTCGTCGTCGTTCTTGATGAACGCCGCATGCTGCC TCTTCCTCGCTCTCTTGCTCTTCCCTGACGCCACTCAAGGCTTTTACCTC TTCCCTCTTCGCAGCAGCACCGGTAGCAGTACCACCAGCAAAACCTGCCG CCAGGCCACGGCTGCCTCCAATGTTCCTCCCCTCCCCCGTAACTTTACGG TAGGGGCTGCTTCCCTTCCTCCCACTCCTTCCACATTCGAGGTGCCCTCT TTCGTCCCTCCTCCTGCCGCGGCCTCTGCGTATGAGCAAGCAAAACAAGC TCCGGGCCCTCGGCGGTGGCCCATAGTGGGAAACACGCTTAAACTCCTTC GCTTGGGTGGAGCCGATGAATTCGACAGGCTGATGTATGACACCTACGGT CCCATGGTCAAGACTCACATTCTAGGTGTTCCTTGGTTCGTCATTAGCGA CCCGCTGCTGGCACGTGAAGTCCTGGTGACTCGCTCCGGTACCGACTTCA AGGATCGATGGGTCGCCAAGCCCCTTGCCCGCCTCTTCGGCAATTATGGC ATCATCTTTGCCAATGCGGAGGAGCACCAGTCAAATCGTCGCATCAGCAT GCCTGCCTTCCATCGCCCGGAGATTCTCGAGCACAGCGCAGTGGTCGTCC AGGGCCTGGCCAAGCAACTCGTCGCGCGCTACGCCTCCTTTCTGCAGGAC GAGGGCGGGAGGGGGGGCGGGACGGAGGGAGGGATCACGGTGGACCTGCA CGATGACATGAGGTTCCTGACACTGGAGGCGGTGTCTCAGGCTTCGTTTT CTCTCCGCCTGGGGCTCCTCGAGAAGGACAGGGGCGAGGGCGTTGTGTAC CGAACCAAGGACGTTTCATTCTCCGGCCGCCGGGTGGATCGGCTCGTCCG CGACAATTTCCGTTTATTGGGACAAAGTATACGCTTTCCCCTCCCAAGCT CCCATCGGGTGGGGCTCAACAAACCCTTCAACGCCCTGCAGAAGGTAAAT GCTGAATTGATGGGCATTGAGAATGCCATCATCGAGGGCCGCCGGCTCGA AAGGAAGCAGATTCGGGCGGAGGGTGGAGAGCTGCCTGCGTCCAGGGACC TCCTGGACGTGTACCTGGAGGCTATTGAAAACGAGGATCTCTCGCTCTCG AACGAATCAATTTTCCGGAACATTAACGATATTTTCATGGCCGGCTCGGA CACGACAGCCACTACCATAAGCGCTTCTTTGTATGAGATTATCCGACGAC CTCAGATCAAAACCCGGGTTCTCGCGGAACTTGCTAACCTAGACATCAAC GATTCCGCGCAAATGAGTCCCTCAGTGCTATCAGAACGACTCCCCTTCCT AGACATGTGTATAAGGGAAACCCTTCGTCTTTACCCTGTGGCCATCAATC TCTCCCGAGTCGCTGCCAAGGACACAGTTCTCGGCGGGTTTAAAATCCCC AAAGGCGCCACTGTGGCTCCTTCCGTCAAAAATCTCCACCACGACACGGC CATTTGGGGCCCCGACGCCAGAGAATACCGTCCGGAACGCTGGGAGAGTG AGCGGTTGGAAGGAGGCTTGCCGAAGGGTGTTCCCCAAGGAGCGTATGTT CCGTTTGGTGCTGGTCCCCGCGTCTGTTTGGGCCTACGTTTTGCCTTGCT TGAGGCACTGACGGTGTGTGCCGTCCTTCTCAAAGAGCTAGACCTGCAAC CTGTTGACATCAGCCGTGACCTTGACGTATATTATCCTGCGGCCATGTCT TTCCGAGGAGGAGTGCCAGTGCGGGTGGAAGGTCTGAGGTAAACTTTTGT AATGAATCGCCTCTCTCGATCACACACGATGCTGAGATATAGTCTGCGCT TGTTGTTGGATAAGGAGTGGAAAATGGCGAGCAGTTGAAAAGAACATAGG TACTCATTCTTAAAGCCCTGTTGAGTTTTGTACATGCTATTGGGCAACGA TCGCGGAGGAAGTGCGAGACACAATCGGGAAAGCCAGCACAGGCAAACGA CACCCTAAAAATAACTTAAATGAAATGTAACGAGAA back to topprotein sequence of NO27G01780.1 >NO27G01780.1-protein ID=NO27G01780.1-protein|Name=NO27G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=609bp MPSTPLPSSSSSWLGQRSSSFLMNAACCLFLALLLFPDATQGFYLFPLRS STGSSTTSKTCRQATAASNVPPLPRNFTVGAASLPPTPSTFEVPSFVPPP AAASAYEQAKQAPGPRRWPIVGNTLKLLRLGGADEFDRLMYDTYGPMVKT HILGVPWFVISDPLLAREVLVTRSGTDFKDRWVAKPLARLFGNYGIIFAN AEEHQSNRRISMPAFHRPEILEHSAVVVQGLAKQLVARYASFLQDEGGRG GGTEGGITVDLHDDMRFLTLEAVSQASFSLRLGLLEKDRGEGVVYRTKDV SFSGRRVDRLVRDNFRLLGQSIRFPLPSSHRVGLNKPFNALQKVNAELMG IENAIIEGRRLERKQIRAEGGELPASRDLLDVYLEAIENEDLSLSNESIF RNINDIFMAGSDTTATTISASLYEIIRRPQIKTRVLAELANLDINDSAQM SPSVLSERLPFLDMCIRETLRLYPVAINLSRVAAKDTVLGGFKIPKGATV APSVKNLHHDTAIWGPDAREYRPERWESERLEGGLPKGVPQGAYVPFGAG PRVCLGLRFALLEALTVCAVLLKELDLQPVDISRDLDVYYPAAMSFRGGV PVRVEGLR* back to topmRNA from alignment at chr27:598926..603292- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO27G01780.1 ID=NO27G01780.1|Name=NO27G01780.1|organism=Nannochloropsis oceanica|type=mRNA|length=4367bp|location=Sequence derived from alignment at chr27:598926..603292- (Nannochloropsis oceanica) AAACACACAGGTACCATGCCCTCCACCCCCTTGCCGTCATCAAGCTCGTC
CTGGCTGGGCCAGAGGTCGTCGTCGTTCTTGATGAACGCCGCATGCTGCC
TCTTCCTCGCTCTCTTGCTCTTCCCTGACGCCACTCAAGGCTTTTACCTC
TTCCCTCTTCGCAGCAGCACCGGTAGCAGTACCACCAGCAAAACCTGCCG
CCAGGCCACGGCTGCCTCCAATGTTCCTCCCCTCCCCCGTAACTTTACGG
TAGGGGCTGCTTCCCTTCCTCCCACTCCTTCCACATTCGAGGTGCCCTCT
TTCGTCCCTCCTCCTGCCGCGGCCTCTGCGTATGAGCAAGCAAAACAAGC
TCCGGGCCCTCGGCGGTGGCCCATAGTGGGAAACACGCTTAAACTCCTTC
GCTTGGGTGGAGCCGATGAATTCGACAGGCTGATGTATGGTACGTCCTCC
CTCCCTCCCTCCTTCTCTCCCTCCCTCCCTTGCTCCTTCCCTGTCTTCAC
GCTTACCTTTCATAACCCCCTCTCCTCCCTCCATTTTATCCTTCTTTCAG
ACACCTACGGTCCCATGGTCAAGACTCACATTCTAGGTGTTCCTTGGTTC
GTCATTAGCGACCCGCTGCTGGCACGTGAAGGTATTTAGGCCCCGCCCGC
CCTTCCTCCCTCCCTCCCTCCTCAGTGGGTCAAGCTCGTCGAGCCCATCA
TTTTTCCTTTTGCCTCCCTGTCCTTCGACTCACACCCCTTCCTCCCTCCC
CCCCTCGCTAGTCCTGGTGACTCGCTCCGGTACCGACTTCAAGGATCGAT
GGGTCGCCAAGCCCCTTGCCCGCCTCTTCGGCAATTATGGCATCATCTTT
GCCAATGCGGAGGAGCACCAGGTCCGCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCACTTCTAGTTTAATCGTCCCTTCCTTTCTCCTGCTT
TTTGAACTTCCTCCCTTTTGGCCTCCTGTTCTCATTTCCCTTCCCTACCC
CTCCCTTCCCATCCCATCCCATCTCCCTTCCACTTTCCCTCCCTCCCTCG
TTTCCTTCCTCCCTCCCCATCAAGTCAAATCGTCGCATCAGCATGCCTGC
CTTCCATCGCCCGGAGATTCTCGAGCACAGCGCAGTGGTCGTCCAGGGCC
TGGCCAAGTAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GTTAGGCGTTCTTCTTGTTCTTCTTTCTTCTTCATCATCAGCTTTGTGGT
AGTTTCTACTAAAATCCTCCAAAATCCTCCTTCCCTCCTTTCGTCCCTAC
CTCCCTCCCTCCCTCATCAACAGGCAACTCGTCGCGCGCTACGCCTCCTT
TCTGCAGGACGAGGGCGGGAGGGGGGGCGGGACGGAGGGAGGGATCACGG
TGGACCTGCACGATGACATGAGGTTCCTGACACTGGAGGCGGTGTCTCAG
GCTTCGTTTTCTCTCCGCCTGGGGCTCCTCGAGAAGGACAGGGGCGAGGG
CGTTGTGTACCGGTAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGAGAGTTAGAGGGAGATAGAGGGAGGGAGGGAGGGAGGGAGAGTCCATG
TTAACTGTTTTTTGTAATTTAAAGCCGGTCACAGGCATATTCTCATGCTT
TCGACTTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTACCC
CCAGAACCAAGGACGTTTCATTCTCCGGCCGCCGGGTGGATCGGCTCGTC
CGCGACAATTTCCGTTTATTGGGACAAAGTATACGCTTTCCCCTCCCAAG
CTCCCATCGGGTGGGGCTCAACAAACCCTTCAACGCCCTGCAGAAGGTAA
GCGTATCACCTATAATCCCTCCCTCCTTCCCTCCCTATCCCTCTCTTTAT
CTTTTCCACCTCATCCCATGGCTCGCTCTCTCTGCTTGCATCGGTCAGGC
TCTCGAATGCTTTGCAGAGGAGAAGGAGGAAGGAAGTGAGGGAGGAGGGA
GGGAAGCAGGGAAGGAAGACGGGAAGAAGGCAACGACATGCAAGTATTCA
GAATCGTCATTTAGATTAAGACGTTCTTGTTCCCTCCCTCCTTCCCTCTC
CACCTCCTTACCTCCCTACCTGCCTCCTTTCCCAGGTAAATGCTGAATTG
ATGGGCATTGAGAATGCCATCATCGAGGGCCGCCGGCTCGAAAGGAAGCA
GATTCGGTAAGATGTGGCGGTAGCGAGGGAGGGAGGAGGGGCGGGAGGGA
AGGTGGGAGAGAGAAGCATGCACAAGTTCTTCGAAAGTGATAGAACGACT
TATCCCTTCACACACACATCTGTATATACAATATATCAACAGGGCGGAGG
GTGGAGAGCTGCCTGCGTCCAGGGACCTCCTGGACGTGTACCTGGAGGCT
ATTGAAAGTAAGTGGAGCCGTGAGAAACACGAGACCGACCCCTTGCCTCT
AGCTTAATATGCGAGGACCCCAATGGCATGCAATGTGTTGTTAGTTTTAC
TCTCGCTTCTTGTCCAGTACCACCGCGTCCAAGGAATGTTATTCTTGATG
GTTTGTCATGTTGCGCTCTGGCACGGACTCGCTGTCGTCTTCTATGTTCC
CTGTACCTTGTAGTCGTACTCACTTATTTCCTTCCCTCTTTGCTTCCCCC
TCTTCCTTTGTTCTCTCACTCCCATTCCAGACGAGGATCTCTCGCTCTCG
AACGAATCAATTTTCCGGAACATTAACGATATTTTCATGGCCGGCTCGGA
CACGACAGCCACTACCATAAGCGCTTCTTTGTATGAGGTACGTAAATAGG
CTGAAGGCAAGGCAAGGACAGAAAGAGGAGGGAGCAAAGGGGCAATTTTA
TGCGCTGGGCTACAGAATCAGAAGAGAGGGACACTTGGGCGCAATCGATG
CATGTCAAGCGCGTAACAGTCATGACATCTGATCTGAACTTGCGAAAAAT
GCATGTTCGCCATCCATCCCTCTCTCGGTCTTCCCCTTCTCGGCATCAGA
TTATCCGACGACCTCAGATCAAAACCCGGGTTCTCGCGGAACTTGCTAAC
CTAGACATCAACGATTCCGCGCAAATGAGTCCCTCAGTGCTATCAGAACG
GTACGATGCTTCCCTCCCTCCCCCTCAGATCCCTGCCTCCTTCATATCAT
TTCATATTCCTTTCCATCACCCCTCCTTCCCTTGCTGCAGACTCCCCTTC
CTAGACATGTGTATAAGGGAAACCCTTCGTCTTTACCCTGTGGCCATCAA
TCTCTCCCGAGTCGCTGCCAAGGACACAGTTCTCGGCGGGTTTAAAATCC
CCAAAGGTAACCCCTCGCTCCCTCCCCGTCATCCCCGCTCTCCAAACCCT
GACAACCCATCTTTTCGAAACTATTAACGACACGTATACAGGCGCCACTG
TGGCTCCTTCCGTCAAAAATCTCCACCACGACACGGCCATTTGGGGCCCC
GACGCCAGAGAATACCGTCCGGAACGCTGGGAGAGTGAGCGGTTGGAAGG
AGGCTTGCCGAAGGGTGTTCCCCAAGGAGCGTATGTTGTAAGTCGTTTTT
CCTCTACTTTTCCTCCTCTGATCCAAATCCTCTCTTGCACTTTCCCGATC
CCACCAGGTGATTGGAATCAGCGCTGGTGGTCGTGGTGCTTGGCGGGAAA
ATTTACCATATTTAGGAATTATCTGACCCACCATCTTCTACCCTGCTCTT
TCTCCTTTTCTTTCCTCTCTTTTTCTCAGCCGTTTGGTGCTGGTCCCCGC
GTCTGTTTGGGCCTACGTTTTGCCTTGCTTGAGGCACTGACGGTGTGTGC
CGTCCTTCTCAAAGAGCTAGACCTGCAACCTGTTGACATCAGGTAAGGTG
TAGGAAAACATTGGAGAAAGGACGAAAAGGGTTGGGTATAAGAGGAGTTT
CGACGGAAGATCGAAGTGTGAATGCTTGTTCCGTCTGTGTTTGTTGTTCT
CGCTACATTGTGTTTAATATAATTTGCACCAACTCAAACTCTCACTAACT
TTTCTCGCTTCTTTTTCTTCATTTCTATCCATTTCTCCCCTCAGCCGTGA
CCTTGACGTATATTATCCTGCGGCCATGTCTTTCCGAGGAGGAGTGCCAG
TGCGGGTGGAAGGTCTGAGGTAAACTTTTGTAATGAATCGCCTCTCTCGA
TCACACACGATGCTGAGATATAGTCTGCGCTTGTTGTTGGATAAGGAGTG
GAAAATGGCGAGCAGTTGAAAAGAACATAGGTACTCATTCTTAAAGCCCT
GTTGAGTTTTGTACATGCTATTGGGCAACGATCGCGGAGGAAGTGCGAGA
CACAATCGGGAAAGCCAGCACAGGCAAACGACACCCTAAAAATAACTTAA
ATGAAATGTAACGAGAA back to topCoding sequence (CDS) from alignment at chr27:598926..603292- >NO27G01780.1 ID=NO27G01780.1|Name=NO27G01780.1|organism=Nannochloropsis oceanica|type=CDS|length=1827bp|location=Sequence derived from alignment at chr27:598926..603292- (Nannochloropsis oceanica) ATGCCCTCCACCCCCTTGCCGTCATCAAGCTCGTCCTGGCTGGGCCAGAG GTCGTCGTCGTTCTTGATGAACGCCGCATGCTGCCTCTTCCTCGCTCTCT TGCTCTTCCCTGACGCCACTCAAGGCTTTTACCTCTTCCCTCTTCGCAGC AGCACCGGTAGCAGTACCACCAGCAAAACCTGCCGCCAGGCCACGGCTGC CTCCAATGTTCCTCCCCTCCCCCGTAACTTTACGGTAGGGGCTGCTTCCC TTCCTCCCACTCCTTCCACATTCGAGGTGCCCTCTTTCGTCCCTCCTCCT GCCGCGGCCTCTGCGTATGAGCAAGCAAAACAAGCTCCGGGCCCTCGGCG GTGGCCCATAGTGGGAAACACGCTTAAACTCCTTCGCTTGGGTGGAGCCG ATGAATTCGACAGGCTGATGTATGACACCTACGGTCCCATGGTCAAGACT CACATTCTAGGTGTTCCTTGGTTCGTCATTAGCGACCCGCTGCTGGCACG TGAAGTCCTGGTGACTCGCTCCGGTACCGACTTCAAGGATCGATGGGTCG CCAAGCCCCTTGCCCGCCTCTTCGGCAATTATGGCATCATCTTTGCCAAT GCGGAGGAGCACCAGTCAAATCGTCGCATCAGCATGCCTGCCTTCCATCG CCCGGAGATTCTCGAGCACAGCGCAGTGGTCGTCCAGGGCCTGGCCAAGC AACTCGTCGCGCGCTACGCCTCCTTTCTGCAGGACGAGGGCGGGAGGGGG GGCGGGACGGAGGGAGGGATCACGGTGGACCTGCACGATGACATGAGGTT CCTGACACTGGAGGCGGTGTCTCAGGCTTCGTTTTCTCTCCGCCTGGGGC TCCTCGAGAAGGACAGGGGCGAGGGCGTTGTGTACCGAACCAAGGACGTT TCATTCTCCGGCCGCCGGGTGGATCGGCTCGTCCGCGACAATTTCCGTTT ATTGGGACAAAGTATACGCTTTCCCCTCCCAAGCTCCCATCGGGTGGGGC TCAACAAACCCTTCAACGCCCTGCAGAAGGTAAATGCTGAATTGATGGGC ATTGAGAATGCCATCATCGAGGGCCGCCGGCTCGAAAGGAAGCAGATTCG GGCGGAGGGTGGAGAGCTGCCTGCGTCCAGGGACCTCCTGGACGTGTACC TGGAGGCTATTGAAAACGAGGATCTCTCGCTCTCGAACGAATCAATTTTC CGGAACATTAACGATATTTTCATGGCCGGCTCGGACACGACAGCCACTAC CATAAGCGCTTCTTTGTATGAGATTATCCGACGACCTCAGATCAAAACCC GGGTTCTCGCGGAACTTGCTAACCTAGACATCAACGATTCCGCGCAAATG AGTCCCTCAGTGCTATCAGAACGACTCCCCTTCCTAGACATGTGTATAAG GGAAACCCTTCGTCTTTACCCTGTGGCCATCAATCTCTCCCGAGTCGCTG CCAAGGACACAGTTCTCGGCGGGTTTAAAATCCCCAAAGGCGCCACTGTG GCTCCTTCCGTCAAAAATCTCCACCACGACACGGCCATTTGGGGCCCCGA CGCCAGAGAATACCGTCCGGAACGCTGGGAGAGTGAGCGGTTGGAAGGAG GCTTGCCGAAGGGTGTTCCCCAAGGAGCGTATGTTCCGTTTGGTGCTGGT CCCCGCGTCTGTTTGGGCCTACGTTTTGCCTTGCTTGAGGCACTGACGGT GTGTGCCGTCCTTCTCAAAGAGCTAGACCTGCAACCTGTTGACATCAGCC GTGACCTTGACGTATATTATCCTGCGGCCATGTCTTTCCGAGGAGGAGTG CCAGTGCGGGTGGAAGGTCTGAGGTAA back to top
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