NO27G01410.1, NO27G01410.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO27G01410.1
Unique NameNO27G01410.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length501
Alignment locationchr27:459974..461348 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:459974..461348 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G01410.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO27G01410NO27G01410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO27G01410.1NO27G01410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO27G01410.1.cds1NO27G01410.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO27G01410.1.cds2NO27G01410.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO27G01410.1.cds3NO27G01410.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO27G01410.1.cds4NO27G01410.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO27G01410.1.cds5NO27G01410.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO27G01410.1.cds6NO27G01410.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO27G01410.1 ID=NO27G01410.1|Name=NO27G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=501bp
ATGGCCATCACATTGGTGGACGAGATGCATGCCCATCCGTGGGAGAGGTA
CAGTGCTTTTCTTGGCCGCTTCCTCCCTTTTCTCGTCTTTGGCATCTCCA
TCCTAGGCTTCATCCTACACAAGTCCATCGGCACGCAGCTCGCCATGTTC
TTCATCTCCTTCTTCATCGCCCTCCTAGAGGCCCCGTGGGTGTACGCGCT
CTTTCCGCCTTGCTACCGCGTCCGGGACAAGCTCATCGAAGACCTGGGGT
TCAGCAAGGGCTGGGTGCGCGGCGTCACGTATGCGGCCTTTTCCATCATT
GCTTACCTGCCTCGACCAACCATCGCCATCCTGTCCGGCCTCCTCCTAGA
CCTGGCCGCCGTCCTCTACACCTGCTCCTCCCTCTTCGCCGACGAAACCA
TCGGGGAGGAGAACAAATTTGAGCAAGCGATGCCACAGCCGTCCTCTACC
TACCAGCCCCCTCCCCCTCCCCCTCCCAGCGCCTCTTTCGGCACGTTCTG
A
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protein sequence of NO27G01410.1

>NO27G01410.1-protein ID=NO27G01410.1-protein|Name=NO27G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=167bp
MAITLVDEMHAHPWERYSAFLGRFLPFLVFGISILGFILHKSIGTQLAMF
FISFFIALLEAPWVYALFPPCYRVRDKLIEDLGFSKGWVRGVTYAAFSII
AYLPRPTIAILSGLLLDLAAVLYTCSSLFADETIGEENKFEQAMPQPSST
YQPPPPPPPSASFGTF*
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mRNA from alignment at chr27:459974..461348-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO27G01410.1 ID=NO27G01410.1|Name=NO27G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=1375bp|location=Sequence derived from alignment at chr27:459974..461348- (Nannochloropsis oceanica)
ATGGCCATCACATTGGTGGACGAGATGCATGCCCATCCGTGGGAGAGGTA
CGTCATTGGGCATTTTTTCGTTTCTATTTGCGTCAATTTTCCGGGTTTTT
CAGAAGAGGGAGAGCGCACCAACCCGCTTACCACCCCCCACTCGCTCCAC
TCGACAAACCCCTTCCTCCTTCCCTCCCTCCGTTTCTTCGTGCTAACACA
CAACAGGTACAGTGCTTTTCTTGGCCGCTTCCTCCCTTTTCTCGTCTTTG
GCATCTCCATCCTAGGCTTCATCCTACACAAGTCCATCGGTACGTGTTTT
TCCCTCCTTCCTCTTTCCCTTCTTACCTCCATCCTTCACTCTGCTCTACC
GCTGCTCATCCTGTCTCCTTCCCTCCCTTCCCCCCTCCCTCAGGCACGCA
GCTCGCCATGTTCTTCATCTCCTTCTTCATCGCCCTCCTAGAGGCCCCGT
GGGTGTACGCGCTCTTTCCGCCTTGCTACCGCGTCCGGGACAAGTAGGGA
GGGAGGGAGAGAGGGAGGGAGGGAGGGATGGGGGGGGAGAAGGAAGAAAT
GAAAAATTGCTTGCGGGCCAATGAGGGAGTCACATGTATTTACATACTAT
CGATTGGCTAGAGCCAGCTGGGAAGGGGGTTTACGGTTGGTCGCCTTTCG
GAAGGCATGGACGGACGGGTGGTCAGTGGCATCCACTCATCCACCCACCC
CTCCTTCCATCCTCTCCTTCCTCCTTCCTCCTTCCTCCTTCCTCCTCTGA
TGGTATCCCCCGTATTCTCTCTCCCCCTCTCCCTCCCCTCTTCAGGCTCA
TCGAAGACCTGGGGTTCAGCAAGGGCTGGGTGCGCGGCGTCACGTATGCG
GCCTTTTCCATCATTGCTTACCTGCCTCGACCAAGTAGGGAGGGAGGGCG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGAACGAAGTAGAGTTATTGGCG
CGTCAGCTTCTATCCTTGTCAGCACCTTGAAGTGGCCCTTCTGATCCCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCACCTAACCCTACCCCTTCCAGCC
ATCGCCATCCTGTCCGGCCTCCTCCTAGACCTGGCCGCCGTCCTCTACAC
CTGCTCCTCCCTCTTCGCCGACGAAACCATCGGGTACGCCCCCTTCCTCC
TCTGAACACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGACCGTGACA
GCTCGCGGAGCCCACCAAGATCCTTCTCACAAACCCACCCCCGCCCTCCC
TCCCTCCCTCCCTTCTTTCATTCCATAGGGAGGAGAACAAATTTGAGCAA
GCGATGCCACAGCCGTCCTCTACCTACCAGCCCCCTCCCCCTCCCCCTCC
CAGCGCCTCTTTCGGCACGTTCTGA
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Coding sequence (CDS) from alignment at chr27:459974..461348-

>NO27G01410.1 ID=NO27G01410.1|Name=NO27G01410.1|organism=Nannochloropsis oceanica|type=CDS|length=501bp|location=Sequence derived from alignment at chr27:459974..461348- (Nannochloropsis oceanica)
ATGGCCATCACATTGGTGGACGAGATGCATGCCCATCCGTGGGAGAGGTA
CAGTGCTTTTCTTGGCCGCTTCCTCCCTTTTCTCGTCTTTGGCATCTCCA
TCCTAGGCTTCATCCTACACAAGTCCATCGGCACGCAGCTCGCCATGTTC
TTCATCTCCTTCTTCATCGCCCTCCTAGAGGCCCCGTGGGTGTACGCGCT
CTTTCCGCCTTGCTACCGCGTCCGGGACAAGCTCATCGAAGACCTGGGGT
TCAGCAAGGGCTGGGTGCGCGGCGTCACGTATGCGGCCTTTTCCATCATT
GCTTACCTGCCTCGACCAACCATCGCCATCCTGTCCGGCCTCCTCCTAGA
CCTGGCCGCCGTCCTCTACACCTGCTCCTCCCTCTTCGCCGACGAAACCA
TCGGGGAGGAGAACAAATTTGAGCAAGCGATGCCACAGCCGTCCTCTACC
TACCAGCCCCCTCCCCCTCCCCCTCCCAGCGCCTCTTTCGGCACGTTCTG
A
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Synonyms
Publications