NO27G01360.2, NO27G01360.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G01360.2
Unique Name	NO27G01360.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3015
Alignment location	chr27:441045..445807 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:441045..445807 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G01360.2 vs.
Match: WP_073626831.1 (arginine decarboxylase [Pseudoxanthobacter soli]; SHO63369.1 arginine decarboxylase [Pseudoxanthobacter soli DSM 19599])

HSP 1 Score: 474.6 bits (1220), Expect = 6.900e-130
Identity = 249/481 (51.77%), Postives = 310/481 (64.45%), Query Frame = 0

Query:    7 HHPRILIVDDDLSQGRVEQVGGRRLRDLLTELKEYGHRILEAVSFADGLANVLSDASIAFLLVDWTLGKNTTGSHQQAIDLLSKARARNAKLPIFLMLDRKVSHTIPLKVKYAGVNEYSW-------------------------------------------AAPGHQGGVAFGKNPAGKLFLDWFGENLFRSDMGIERTNLGSVLDHTGAFGAGEKYQSYVFGSTRTYSGVNGSSGSNRVVFSACVQEGQVALCDRNCHKSIEQGLVCSGGIPHYIVPTRNRYGVIGPIPPSSLQAESILAGVATNPLVCAVMAKSGASSPPVPVYAVVTNCTYDGLSIDCHKAERLLGDVVDRLHFDEAWWAYARFNQMYKNRFAMRGDAKDHPKDGPTVFATQSTHKLLAALSQATFIHVREGRTAIPHRVFNEAYCLHTTTSPLYAISASNDISAAMMDGGGGKSLTEECIREAVAFRQSLMRAYR 445
            H P++LIVDD L+      VGGR +R L  EL+  G  ++EAV++ DG A ++SD S+  +L+DWT  +    S +  +DLL   RARNA++P+ LM DR     + ++V     NEY W                                           AAPGHQGGVAF K P+G+ F D+FGEN+FR+D GIER  LGS++DH+G  G  E+Y + VFG+  +YSG+ G+SGSNR +  A V + + ALCDRNCHKSIEQGL+ SGGIP + VPTRNRYG+IGPIPP  L+ E+I   +A +PL          +S   PVYAVVTNCTYDGL  D    ER L  +VDR+HFDEAW+ YARFN +Y NR+AMRGD  DHP DGPTVFAT STHKLLAALSQA++IHVR GR  I H  FNEAY   TTTSPLYA+ ASN+I AAMMDG  G +LT E I EA+AFRQ+L RA+R
Sbjct:    9 HKPKVLIVDDTLAMP--SSVGGRAVRALSEELESRGIEVVEAVTYQDGRAAIVSDPSLDAILLDWTREREEGLSEEDGMDLLRTIRARNAEIPVILMEDRTSGEDLTVEVMQL-ANEYVWMLEDTTSFIAGRIMAAVKRYREDLLPPFTKALLDYADTAEYSWAAPGHQGGVAFTKTPSGRAFFDFFGENIFRTDTGIEREQLGSLMDHSGPIGEAEQYAARVFGAHLSYSGLTGTSGSNRAIMGALVADNEFALCDRNCHKSIEQGLIQSGGIPLFFVPTRNRYGIIGPIPPEQLEPETIAERLAAHPL-------RHLASDDDPVYAVVTNCTYDGLCYDAAGVERRLDGIVDRIHFDEAWFGYARFNPLYDNRYAMRGDPADHPADGPTVFATHSTHKLLAALSQASYIHVRNGRDPIEHTRFNEAYMAQTTTSPLYALIASNEIGAAMMDGPSGHALTHEVILEAIAFRQALARAHR 479

The following BLAST results are available for this feature:

BLAST of NO27G01360.2 vs.

BLAST of NO27G01360.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
WP_073626831.1	6.900e-130	51.77	arginine decarboxylase [Pseudoxanthobacter soli]; ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G01360	NO27G01360	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G01360.2	NO27G01360.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G01360.2.cds1	NO27G01360.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01360.2.cds2	NO27G01360.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01360.2.cds3	NO27G01360.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01360.2.cds4	NO27G01360.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01360.2.cds5	NO27G01360.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01360.2.cds6	NO27G01360.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01360.2.cds7	NO27G01360.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01360.2.cds8	NO27G01360.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01360.2.cds9	NO27G01360.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:441045..445807+
coding sequence from alignment at chr27:441045..445807+

mRNA sequence

>NO27G01360.2 ID=NO27G01360.2|Name=NO27G01360.2|organism=Nannochloropsis oceanica|type=mRNA|length=3015bp
TCGGGACCGAGAGCGCATCTCGCTTATGCCCAAGCCCGCAGGAAATCTGA
AAGATGGCCTTGGCTATCTCACCATTATAAACAGCTTGAGGCAACAGAGG
CATTTTCACAGCAGAAGTGTGAACGTGTTCTGTGTTGTGAGGGGTTCCAT
CCCACTTTTTTTATACGCGGAGTAATGCGTCGTAATTACTTTGATGTGTG
TCGGCGCTTCTTCAAAAGTAAGTCAACCATACGACTCCACTCAACACACA
AGCATAGGAGCAGCAGCGCGACAACCCCAGCAGCACGGGTACACGACTGA
TCATCAAAAGCATTATCCACTGTTGCAATGGCCGGAGAGATTGAGCATCA
CCCCCGTATTCTGATAGTCGACGACGACCTCTCTCAGGGCCGCGTCGAAC
AAGTCGGTGGACGCCGTCTCCGTGATCTGTTGACAGAGCTGAAGGAGTAC
GGTCACCGCATTTTGGAGGCTGTGTCGTTTGCAGATGGACTGGCCAACGT
CCTGAGCGATGCCAGTATCGCCTTCCTCCTCGTGGATTGGACGCTGGGAA
AGAACACCACGGGCTCACACCAACAGGCCATCGACCTCTTGAGCAAAGCC
CGGGCCCGCAATGCCAAGCTTCCCATCTTTCTGATGCTCGACCGTAAAGT
GTCTCACACCATCCCCTTGAAGGTCAAGTATGCCGGCGTAAACGAGTACA
GCTGGGCAGCACCAGGGCACCAAGGGGGGGTGGCCTTCGGGAAGAACCCG
GCGGGCAAGCTCTTCTTAGACTGGTTCGGAGAGAACTTGTTCCGCTCGGA
CATGGGTATCGAACGCACAAACCTTGGCTCTGTGCTTGACCACACAGGGG
CCTTTGGCGCCGGCGAGAAGTATCAGTCGTACGTGTTCGGAAGCACCAGG
ACCTACTCGGGCGTAAATGGCTCATCGGGCTCCAACCGCGTCGTCTTCTC
GGCTTGTGTCCAAGAAGGACAAGTCGCGCTTTGTGATCGGAACTGCCACA
AGTCCATCGAGCAAGGCCTTGTCTGCTCTGGTGGGATCCCGCACTACATC
GTCCCGACCCGGAACCGATACGGAGTCATTGGGCCCATACCCCCGTCCTC
CCTCCAGGCCGAAAGCATCCTGGCTGGCGTGGCAACCAACCCCCTCGTGT
GTGCGGTGATGGCCAAGAGCGGGGCCTCGTCGCCACCAGTCCCCGTGTAT
GCGGTTGTGACGAATTGCACGTATGATGGCCTGTCTATTGACTGCCACAA
GGCGGAGAGGCTGTTGGGAGATGTCGTCGATCGGCTGCATTTTGATGAAG
CATGGTGGGCTTACGCGAGGTTCAACCAGATGTACAAGAATCGATTTGCC
ATGCGAGGCGATGCCAAGGATCATCCCAAAGACGGCCCTACGGTCTTTGC
GACCCAGTCGACGCACAAACTCCTCGCTGCTTTGAGCCAAGCCACCTTCA
TCCATGTCCGCGAAGGACGCACCGCCATTCCTCATCGCGTATTCAACGAG
GCCTACTGCCTGCACACCACGACCTCGCCTTTGTACGCCATCAGTGCGTC
CAACGACATTTCTGCCGCCATGATGGACGGCGGTGGGGGAAAGTCGCTGA
CGGAGGAGTGTATTCGTGAGGCGGTGGCTTTTAGGCAGTCATTAATGCGG
GCGTATCGTGAGATCACCCAGACCTGCGGGTCGACGCCGTTGACGACAAT
ACCTCGCGCTGGTGAAGGGGGAGGGGAGGAAATCGGAGGCGGGATTGGCT
CGGTGACCACGCGCTCGGCCGACATCGCCGGCAGTGGCAGTGGCAGGACC
AATGCGACTGCGGCGGCGGGGGCCGGTGCTGACGCGAGCGCGACAAACGC
TAATTCCATCATGAGTGACAGTACCGCCACCAGTAACAGCGCGTTGCCAG
CAGCAGTAGGCAAGAAGACGGGCAGCAGCCAGAGTGACAAAAAAGGGAGC
AACAAAAACGGGTTGACTCCTGGCTCTTGGTTTTTTCACCCATTCAATGC
TTGGGAGGTGACCGACCCAGCCACGGGTAATAAAGTTGCCTTTGACCACG
CTAAGCCCGACTTGCTGGCGACGGAAGCTCGTTGTTGGGTGCTGGATCCG
CAGGCAAGTTGGCATGGTTTTCCAGCGGGAAGTTTGGAGGATGGTTGGTG
CCTTCTGGATCCCATCAAAGTCGCTATAGTCACGCCGGGCATGTCGCCGG
AGGGCATCTACGAGAAGCGTGGCATCCCCGCGCCGATCGTGACGGCGTAT
CTGAACGAACGCGGAATCATTGTGGCGCGGACGATGAGCCACATGATTCT
CTTCCTATTCTCCATCGGCATCACTAAGGGGAAATGGGGGACGTTGCTTT
CGGCGCTATTGGCCTTTCGCGCCGACTATGAGCGGAACGAGCCGGTCTCT
CGTGTGCTCCCTACCCTGTACGAAGGACACCGGGACACATACCGGGGCAA
GGGGCTGAGGGACCTGTGTGACGACATGTTCTTATTCAATGTGCGACAAG
ATCAACAAGAAGTTCTTCACGCGGCCTTTGAGCGATTGCCTACTCCGCGG
ATGACCCCCCGTGCGGCGTTTCAGCAGTTGATGGGCACGCGGGTCGAGAC
CTTGGGCCTGGACGCATTGGAAGGGAGGACGAGTGGCATGTGCGTCATTC
CTTACCCGCCAGGCATTCCCCTATTGATGTCCGGGGAAGTTGTCAGTAGG
GAGCATGTCGCCTACCTGCGTGCTATGGAAGCTTTTGATCGGACTTTTCC
CGGTTTCGAAAATGAAATTCAGGGCGTCAATACCGAAGACCTGCTGGACG
AAGGCTACAAAATCACAGTGTTGGTGGAGGAAGATGAAGATGGAGGAAAG
GAGACTAGGGAGGCCCAGGATATAATGGCGGGGACGCCATCCCCTGCAAG
TGCCTCGGTGACCTCCTCTGCCTCCACGTCTTCTTTAAACTCGGGGCGCG
GGCAGCCCAAGCGGCGCAAGAGATAATATAGAAGAAGGGAAATATCTGTA
GACGCAGAAAGAAAC

protein sequence of NO27G01360.2

>NO27G01360.2-protein ID=NO27G01360.2-protein|Name=NO27G01360.2|organism=Nannochloropsis oceanica|type=polypeptide|length=883bp
MAGEIEHHPRILIVDDDLSQGRVEQVGGRRLRDLLTELKEYGHRILEAVS
FADGLANVLSDASIAFLLVDWTLGKNTTGSHQQAIDLLSKARARNAKLPI
FLMLDRKVSHTIPLKVKYAGVNEYSWAAPGHQGGVAFGKNPAGKLFLDWF
GENLFRSDMGIERTNLGSVLDHTGAFGAGEKYQSYVFGSTRTYSGVNGSS
GSNRVVFSACVQEGQVALCDRNCHKSIEQGLVCSGGIPHYIVPTRNRYGV
IGPIPPSSLQAESILAGVATNPLVCAVMAKSGASSPPVPVYAVVTNCTYD
GLSIDCHKAERLLGDVVDRLHFDEAWWAYARFNQMYKNRFAMRGDAKDHP
KDGPTVFATQSTHKLLAALSQATFIHVREGRTAIPHRVFNEAYCLHTTTS
PLYAISASNDISAAMMDGGGGKSLTEECIREAVAFRQSLMRAYREITQTC
GSTPLTTIPRAGEGGGEEIGGGIGSVTTRSADIAGSGSGRTNATAAAGAG
ADASATNANSIMSDSTATSNSALPAAVGKKTGSSQSDKKGSNKNGLTPGS
WFFHPFNAWEVTDPATGNKVAFDHAKPDLLATEARCWVLDPQASWHGFPA
GSLEDGWCLLDPIKVAIVTPGMSPEGIYEKRGIPAPIVTAYLNERGIIVA
RTMSHMILFLFSIGITKGKWGTLLSALLAFRADYERNEPVSRVLPTLYEG
HRDTYRGKGLRDLCDDMFLFNVRQDQQEVLHAAFERLPTPRMTPRAAFQQ
LMGTRVETLGLDALEGRTSGMCVIPYPPGIPLLMSGEVVSREHVAYLRAM
EAFDRTFPGFENEIQGVNTEDLLDEGYKITVLVEEDEDGGKETREAQDIM
AGTPSPASASVTSSASTSSLNSGRGQPKRRKR*

mRNA from alignment at chr27:441045..445807+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G01360.2 ID=NO27G01360.2|Name=NO27G01360.2|organism=Nannochloropsis oceanica|type=mRNA|length=4763bp|location=Sequence derived from alignment at chr27:441045..445807+ (Nannochloropsis oceanica)
TCGGGACCGAGAGCGCATCTCGCTTATGCCCAAGCCCGCAGGAAATCTGA
AAGATGGCCTTGGCTATCTCACCATTATAAACAGCTTGAGGCAACAGAGG
CATTTTCACAGCAGAAGTGTGAACGTGTTCTGTGTTGTGAGGGGTTCCAT
CCCACTTTTTTTATACGCGGAGTAATGCGTCGTAATTACTTTGATGTGTG
TCGGCGCTTCTTCAAAAGTAAGTCAACCATACGACTCCACTCAACACACA
AGCATAGGAGCAGCAGCGCGACAACCCCAGCAGCACGGGTACACGACTGA
TCATCAAAAGCATTATCCACTGTTGCAATGGCCGGAGAGATTGAGCATCA
CCCCCGTATTCTGATAGTCGACGACGACCTCTCTCAGGGCCGCGTCGAAC
AAGTCGGTGGACGCCGTCTCCGTGATCTGTAAGTTGTCGGGTCCAAGTAT
CCTTCTTGGTTGATTTGTCTCTATCACATGCTTGCTGGCATTTGCCTCGT
TCCCCAGATGTCTTTTTCGCGGAAGCCTCCCCCATTCCCATCGCTATCTT
CTTTGTTCCCCTTCTCGCGACCTAGGTTGACAGAGCTGAAGGAGTACGGT
CACCGCATTTTGGAGGCTGTGTCGTTTGCAGATGGACTGGCCAACGTCCT
GAGCGATGCCAGTATCGCCTTCCTCCTCGTGGATTGGACGCTGGGAAAGA
ACACCACGGGCTCACACCAACAGGTAAAGCGGGATCGCTCTACCCCTGTC
CCTTTCATTTCATGGCCTCCCTCAACCCTTCCATCCCTCACTCATCCCCC
CGCGCTTATTCAATAGGCCATCGACCTCTTGAGCAAAGCCCGGGCCCGCA
ATGCCAAGCTTCCCATCTTTCTGATGCTCGACCGTAAAGTGTCTCACACC
ATCCCCTTGAAGGTAAGGTATGTGTGCCGCGCCACTCTCCACCACGGTCG
GTCCACGTGCTTACTCCCTCCCTACCCTCGCTCACTTCATCGGTAACCTC
TCTCCTTCTCATAGGTCATGGAGTTGTCGAACGAGTTCGTGTGGCTGCTT
GAGGACAGTCCGAAATTTATTGCGGGAAGAATCAATGCTGCAACTCGGCG
CTACCTGGAGGAGCTTTTGCCGCCCTTGGCGAATGCGATGGTACGACGAG
ACGACAAGAACGTGGAAGAGCATGGACTGACCGAATCCGAAAGGAAGGGA
GGAAAGGTCTTGCCCATGTACCCTCCCACCCTCCCCCCTTCTACCCGCCG
ACCCTCTCCCTCTTGATGCTGTCTGTACCCACCCACCCACCCTTCTCGGC
ATCTCTACATGTTTGGCTTTTACTCCACCTAGGTCAAGTATGCCGGCGTA
AACGAGTACAGCTGGGCAGCACCAGGTATGTGCTCTCTTTTTCCGGCCCC
TTTTTCTCTCCTGCCTCTTCCTTTCTTTCGTTTGAATTTGCGCCCTCCCT
TCCTCCCTCTCGTCTTACGTGCCCGAAGTCTTCCATTATTTTCTACTCTT
GGTTCCTTGCGACTGACCTTCAATTCTTCTTCCTTCTTTCTCCTCGCACT
TCTCCCCTCATCTTATTTGTCCTAGGGCACCAAGGGGGGGTGGCCTTCGG
GAAGAACCCGGCGGGCAAGCTCTTCTTAGACTGGTTCGGAGAGAACTTGG
TACGGACAGAGGGGACAAGAGAGGGGGGGAATCTAGGGTGGATGTGAGAA
CTTGCTTGTGATTCGAAGGCGTCCACTGCTCGCTTTTGCCCAGTGCCTGC
CAAACCTTGCGCTGCTTTAACTCACTTCCCTGCTGCTTTGTTTCCTCCAC
ACCTCCTCCATACCTATCGCCTCTCAGTTCCGCTCGGACATGGGTATCGA
ACGCACAAACCTTGGCTCTGTGCTTGACCACACAGGGGCCTTTGGCGCCG
GCGAGAAGTATCAGTCGTACGTGTTCGGAAGCACCAGGACCTACTCGGGT
AGGGAGGACGTCGGATAGTGCTCGAACTCTTCTTTTCCCTCTTCCTTGCA
CGTTTGTAGACGTGGATGCACCCCACTGACACCATTATATATATATATAT
ATACACACATATTTACGCACTTTCTACTGCAAATCCACTTCGTCCCCCAA
TCGGGGCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTGCCCCCCTCCCTTAATACTCAGGCGTAAATGGCTCATCGGGCT
CCAACCGCGTCGTCTTCTCGGCTTGTGTCCAAGAAGGACAAGTCGCGCTT
TGTGATCGGAACTGCCACAAGTCCATCGAGCAAGGCCTTGTCTGCTCTGG
TGGGATCCCGCACTACATCGTCCCGACCCGGAACCGATACGGAGTCATTG
GGCCCATACCCCCGTCCTCCCTCCAGGCCGAAAGCATCCTGGCTGGCGTG
GCAACCAACCCCCTCGTGTGTGCGGTGATGGTAAGGCGGGAAGAATGGAG
GAATGGGCGGAAGGTTGGGAGGGTGGCAGCAAGGCTAATTGCTGGTAAAA
TAGGTTTTGATGAAAGAAAGCGGAGAGACCTGTGGATGAAACGAAGGGTT
CGATCCACGACGTACAGATATATACGTACTTCACAACTTATTCACCCCCC
ACATTTCTTCATTTCCCATCCTTTTTCCTCCGTCCCCGTCTTTTTCTCCT
TTTTCCCTTGTCAGGCCAAGAGCGGGGCCTCGTCGCCACCAGTCCCCGTG
TATGCGGTTGTGACGAATTGCACGTATGATGGCCTGTCTATTGACTGCCA
CAAGGCGGAGAGGCTGTTGGGAGATGTCGTCGATCGGCTGCATTTTGATG
AAGTGCGTGGGTGAGGGGGGATGTGTGACGATGGCAACTCTTCTCATATA
TCCTTCTCTCTTGATGATCTCTCTATATGTGTGCAAGTATCTACTACTGA
CGTCTTCAATCTGTTTGAGTGAGGTGTAGCGTCTCTTGATGGTGTCTGTT
TCTACATCACGCTTACCTCCAATTTTTAAATGAAAGTATCCTCCAATGCA
TCCGCAACCTTCTAACCTCGGATTTCCACAAATCCATCCTTACACAGGCA
TGGTGGGCTTACGCGAGGTTCAACCAGATGTACAAGAATCGATTTGCCAT
GCGAGGCGATGCCAAGGATCATCCCAAAGACGGCCCTACGGTCTTTGCGA
CCCAGTCGACGCACAAACTCCTCGCTGCTTTGAGCCAAGCCACCTTCATC
CATGTCCGCGAAGGACGCACCGCCATTCCTCATCGCGTATTCAACGAGGC
CTACTGCCTGCACACCACGACCTCGCCTTTGTACGCCATCAGTGCGTCCA
ACGACATTTCTGCCGCCATGATGGACGGCGGTGGGGGAAAGTCGCTGACG
GAGGAGTGTATTCGTGAGGCGGTGGCTTTTAGGCAGTCATTAATGCGGGC
GTATCGTGAGATCACCCAGACCTGCGGGTCGACGCCGTTGACGACAATAC
CTCGCGCTGGTGAAGGGGGAGGGGAGGAAATCGGAGGCGGGATTGGCTCG
GTGACCACGCGCTCGGCCGACATCGCCGGCAGTGGCAGTGGCAGGACCAA
TGCGACTGCGGCGGCGGGGGCCGGTGCTGACGCGAGCGCGACAAACGCTA
ATTCCATCATGAGTGACAGTACCGCCACCAGTAACAGCGCGTTGCCAGCA
GCAGTAGGCAAGAAGACGGGCAGCAGCCAGAGTGACAAAAAAGGGAGCAA
CAAAAACGGGTTGACTCCTGGCTCTTGGTTTTTTCACCCATTCAATGCTT
GGGAGGTGACCGACCCAGCCACGGGTAATAAAGTTGCCTTTGACCACGCT
AAGCCCGACTTGCTGGCGACGGAAGCTCGTTGTTGGGTGCTGGATCCGCA
GGCAAGTTGGCATGGTTTTCCAGCGGGAAGTTTGGAGGATGGTTGGTGCC
TTCTGGATCCCATCAAAGTCGCTATAGTCACGCCGGGCATGTCGCCGGAG
GGCATCTACGAGAAGCGTGGCATCCCCGCGCCGATCGTGACGGCGTATCT
GAACGAACGCGGAATCATTGTGGCGCGGACGATGAGCCACATGATTCTCT
TCCTATTCTCCATCGGCATCACTAAGGGGAAATGGGGGACGTTGCTTTCG
GCGCTATTGGCCTTTCGCGCCGACTATGAGCGGAACGAGCCGGTCTCTCG
TGTGCTCCCTACCCTGTACGAAGGACACCGGGACACATACCGGGGCAAGG
GGCTGAGGGACCTGTGTGACGACATGTTCTTATTCAATGTGCGACAAGAT
CAACAAGAAGTTCTTCACGCGGCCTTTGAGCGATTGCCTACTCCGCGGAT
GACCCCCCGTGCGGCGTTTCAGCAGTTGATGGGCACGCGGGTCGAGACCT
TGGGCCTGGACGCATTGGAAGGGAGGACGAGTGGCATGTGCGTCATTCCT
TACCCGCCAGGCATTCCCCTATTGATGTCCGGGGAAGTTGTCAGTAGGGA
GCATGTCGCCTACCTGCGTGCTATGGAAGCTTTTGATCGGACTTTTCCCG
GTTTCGAAAATGAAATTCAGGGCGTCAATACCGAAGACCTGCTGGACGAA
GGCTACAAAATCACAGTGTTGGTGGAGGAAGATGAAGATGGAGGAAAGGA
GACTAGGGAGGCCCAGGATATAATGGCGGGGACGCCATCCCCTGCAAGTG
CCTCGGTGACCTCCTCTGCCTCCACGTCTTCTTTAAACTCGGGGCGCGGG
CAGCCCAAGCGGCGCAAGAGATAATATAGAAGAAGGGAAATATCTGTAGA
CGCAGAAAGAAAC

Coding sequence (CDS) from alignment at chr27:441045..445807+

>NO27G01360.2 ID=NO27G01360.2|Name=NO27G01360.2|organism=Nannochloropsis oceanica|type=CDS|length=2649bp|location=Sequence derived from alignment at chr27:441045..445807+ (Nannochloropsis oceanica)
ATGGCCGGAGAGATTGAGCATCACCCCCGTATTCTGATAGTCGACGACGA
CCTCTCTCAGGGCCGCGTCGAACAAGTCGGTGGACGCCGTCTCCGTGATC
TGTTGACAGAGCTGAAGGAGTACGGTCACCGCATTTTGGAGGCTGTGTCG
TTTGCAGATGGACTGGCCAACGTCCTGAGCGATGCCAGTATCGCCTTCCT
CCTCGTGGATTGGACGCTGGGAAAGAACACCACGGGCTCACACCAACAGG
CCATCGACCTCTTGAGCAAAGCCCGGGCCCGCAATGCCAAGCTTCCCATC
TTTCTGATGCTCGACCGTAAAGTGTCTCACACCATCCCCTTGAAGGTCAA
GTATGCCGGCGTAAACGAGTACAGCTGGGCAGCACCAGGGCACCAAGGGG
GGGTGGCCTTCGGGAAGAACCCGGCGGGCAAGCTCTTCTTAGACTGGTTC
GGAGAGAACTTGTTCCGCTCGGACATGGGTATCGAACGCACAAACCTTGG
CTCTGTGCTTGACCACACAGGGGCCTTTGGCGCCGGCGAGAAGTATCAGT
CGTACGTGTTCGGAAGCACCAGGACCTACTCGGGCGTAAATGGCTCATCG
GGCTCCAACCGCGTCGTCTTCTCGGCTTGTGTCCAAGAAGGACAAGTCGC
GCTTTGTGATCGGAACTGCCACAAGTCCATCGAGCAAGGCCTTGTCTGCT
CTGGTGGGATCCCGCACTACATCGTCCCGACCCGGAACCGATACGGAGTC
ATTGGGCCCATACCCCCGTCCTCCCTCCAGGCCGAAAGCATCCTGGCTGG
CGTGGCAACCAACCCCCTCGTGTGTGCGGTGATGGCCAAGAGCGGGGCCT
CGTCGCCACCAGTCCCCGTGTATGCGGTTGTGACGAATTGCACGTATGAT
GGCCTGTCTATTGACTGCCACAAGGCGGAGAGGCTGTTGGGAGATGTCGT
CGATCGGCTGCATTTTGATGAAGCATGGTGGGCTTACGCGAGGTTCAACC
AGATGTACAAGAATCGATTTGCCATGCGAGGCGATGCCAAGGATCATCCC
AAAGACGGCCCTACGGTCTTTGCGACCCAGTCGACGCACAAACTCCTCGC
TGCTTTGAGCCAAGCCACCTTCATCCATGTCCGCGAAGGACGCACCGCCA
TTCCTCATCGCGTATTCAACGAGGCCTACTGCCTGCACACCACGACCTCG
CCTTTGTACGCCATCAGTGCGTCCAACGACATTTCTGCCGCCATGATGGA
CGGCGGTGGGGGAAAGTCGCTGACGGAGGAGTGTATTCGTGAGGCGGTGG
CTTTTAGGCAGTCATTAATGCGGGCGTATCGTGAGATCACCCAGACCTGC
GGGTCGACGCCGTTGACGACAATACCTCGCGCTGGTGAAGGGGGAGGGGA
GGAAATCGGAGGCGGGATTGGCTCGGTGACCACGCGCTCGGCCGACATCG
CCGGCAGTGGCAGTGGCAGGACCAATGCGACTGCGGCGGCGGGGGCCGGT
GCTGACGCGAGCGCGACAAACGCTAATTCCATCATGAGTGACAGTACCGC
CACCAGTAACAGCGCGTTGCCAGCAGCAGTAGGCAAGAAGACGGGCAGCA
GCCAGAGTGACAAAAAAGGGAGCAACAAAAACGGGTTGACTCCTGGCTCT
TGGTTTTTTCACCCATTCAATGCTTGGGAGGTGACCGACCCAGCCACGGG
TAATAAAGTTGCCTTTGACCACGCTAAGCCCGACTTGCTGGCGACGGAAG
CTCGTTGTTGGGTGCTGGATCCGCAGGCAAGTTGGCATGGTTTTCCAGCG
GGAAGTTTGGAGGATGGTTGGTGCCTTCTGGATCCCATCAAAGTCGCTAT
AGTCACGCCGGGCATGTCGCCGGAGGGCATCTACGAGAAGCGTGGCATCC
CCGCGCCGATCGTGACGGCGTATCTGAACGAACGCGGAATCATTGTGGCG
CGGACGATGAGCCACATGATTCTCTTCCTATTCTCCATCGGCATCACTAA
GGGGAAATGGGGGACGTTGCTTTCGGCGCTATTGGCCTTTCGCGCCGACT
ATGAGCGGAACGAGCCGGTCTCTCGTGTGCTCCCTACCCTGTACGAAGGA
CACCGGGACACATACCGGGGCAAGGGGCTGAGGGACCTGTGTGACGACAT
GTTCTTATTCAATGTGCGACAAGATCAACAAGAAGTTCTTCACGCGGCCT
TTGAGCGATTGCCTACTCCGCGGATGACCCCCCGTGCGGCGTTTCAGCAG
TTGATGGGCACGCGGGTCGAGACCTTGGGCCTGGACGCATTGGAAGGGAG
GACGAGTGGCATGTGCGTCATTCCTTACCCGCCAGGCATTCCCCTATTGA
TGTCCGGGGAAGTTGTCAGTAGGGAGCATGTCGCCTACCTGCGTGCTATG
GAAGCTTTTGATCGGACTTTTCCCGGTTTCGAAAATGAAATTCAGGGCGT
CAATACCGAAGACCTGCTGGACGAAGGCTACAAAATCACAGTGTTGGTGG
AGGAAGATGAAGATGGAGGAAAGGAGACTAGGGAGGCCCAGGATATAATG
GCGGGGACGCCATCCCCTGCAAGTGCCTCGGTGACCTCCTCTGCCTCCAC
GTCTTCTTTAAACTCGGGGCGCGGGCAGCCCAAGCGGCGCAAGAGATAA

Synonyms

Publications