NO27G00660.1, NO27G00660.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G00660.1
Unique Name	NO27G00660.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3220
Alignment location	chr27:245516..249660 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:245516..249660 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G00660.1 vs.
Match: EWM21022.1 (hypothetical protein Naga_100271g2 [Nannochloropsis gaditana])

HSP 1 Score: 586.3 bits (1510), Expect = 1.900e-163
Identity = 301/531 (56.69%), Postives = 374/531 (70.43%), Query Frame = 0

Query:  491 NYQVRYASFSVYDLNLPGPVLRSVSDNEFRTFYSKMYGNATWELTYGRNVSLVVVKNLAVLERCNVDTSESFVVELDQHEPVSDWFGIVYREVLPQGLAINTTPKAATQLVAKKRLSIYDESIYDAKQAICRTGADEEICDPNPYRVAQTMKMHTPRIDYFLCSQSGVLHVAPPATIDPFVGKGYPLLADTAWGGNAHDNLAPEDVQACINRTTGLAEGLLRAYSPCAQIHLYQAQRPVKVVAPGQIGLWDVSVITTATEVPTPVVVGVSILGKTADEAPFLVEVELCGSTFVSDHHWRCSNEPPTDNTWLLPTFRENSDWKPATWARCASCTEGAALF-GAMAPATMRSKAAAQTLNAVAAQKINNRAHLEPINQAPPLHFFSQDGRRYIQPSPRLDQEAEEAWREWQLAKEEANSAWRAWRRAKKQQQQQHNGTSMGDGTTILSKDEQDIFATFMASSRNSTINTNTTTSSTDWRDHMNVTAA-DVALQWAKPRPTQIHSYYCRLVLPNPGVVDGLGATTR--GRSVVG 1018
            +Y VRYASFSVYDLNLPGP+LRSVSD+EFR FY  +YGN TWE++YGRNVSLVVV+N AVL+RC +DTSESFVVELDQHEPVSDWFG+VYRE+LPQ LA +T  +AA+ L +K   ++YDESI+DAKQA+C TG DE +CDPNP+RVAQTMKMHTPR DYF+CS SG++ VAPPAT DPF   GYP L D AW       + PED QAC + T+G  EG++R YSPCA IH++ A +PVKVV PGQ+G+    V   +T    PVVVG+S+   TADEAPF+ EV+LCG+TF+SDHHWRCSNEPP D+TWLLPTF+E  +WK AT A+CA C  G   F   M+  T R+      L+ + A+ I  R   +P ++   L +FS+DGR++IQPSP LD+EA+EAW+ W+ AKE+AN+AWRAWR AK    +QH   +    +T+ S            S+       N T  S DWRD   +++A D  L+W+KPRPTQIH YYCRLV PNP     LG   R  GR  VG
Sbjct:  283 SYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDDGTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTG---PVVVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAYCRRGPLPFTSTMSTRTARAPHLFD-LSTMDARGIG-RPIYKPTHRDGNLRYFSKDGRKFIQPSPLLDEEAKEAWQNWKQAKEDANNAWRAWRLAK----EQHRNRTANSNSTLDSIPPGVQHMATNLSTPGGISTVNATVRSPDWRDFSKMSSAVDATLRWSKPRPTQIHGYYCRLVFPNP-----LGDNERQAGRGAVG 799

The following BLAST results are available for this feature:

BLAST of NO27G00660.1 vs.

BLAST of NO27G00660.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM21022.1	1.900e-163	56.69	hypothetical protein Naga_100271g2 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G00660	NO27G00660	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00660.1	NO27G00660.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00660.1.cds1	NO27G00660.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds2	NO27G00660.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds3	NO27G00660.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds4	NO27G00660.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds5	NO27G00660.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds6	NO27G00660.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds7	NO27G00660.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds8	NO27G00660.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds9	NO27G00660.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00660.1.cds10	NO27G00660.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:245516..249660-
coding sequence from alignment at chr27:245516..249660-

mRNA sequence

>NO27G00660.1 ID=NO27G00660.1|Name=NO27G00660.1|organism=Nannochloropsis oceanica|type=mRNA|length=3220bp
TGCTTGTCGTTCCTCTCAAGCTTTCTGTTCGGCCCACGACGCATCGTTCT
CAGCTTCTCTTTCTTCCCCTCATGTTCTAACTCGAACACACCGCCATTTC
CTCATGCAACAAATGGTTTTCTTGAGCACAATTCACAACAAGGACCATCC
TTTACATAGATTGGACATTCAACAATCCCGCGAGACCCCTTCTCCACCCA
CCAATCACCTCGTGTTCGTCTTGCCAAGCATGTGGGACAAGTGCTGCAGT
CTCCTCCTTGTGCTCCCTTTGATTTGCGGTGGTCAAGCTCAAATCCTATT
CAATAATAAGGCCAACCAAGCATCAGCGGATGCCTCTCCGACGGCATTGT
CCATCATGCTTCAAAAACTCAAGAATGTCGCTATAAAGGCCATGAACGAG
CGTGGTTACACTCATCTGGCTGAGGTGACTGTGGCGCAAAACAAGCCAAT
TGGACGCTGGGGCAAGCTGGAGTCGTCAGCGGCGGAATCCAGCATGGCCT
CAGAGGGCAGCAGTCTCGTGACCCTCGACCTGCCCCCTGAGCCCCTAGCC
GAGCTCATCAACGTCATGGACTTGTATCAGTCCCTTTTTGGCACCACGCC
TGATTTTTCTGATATTAACAACACGGCTAGTTTTTATCAAAAAGTTCAAG
AAATCATCCTCACCTCCGCACCCTCCTTTTCACTCGCCTGCCAACCGAGT
TTCCGTGTCTGGCCTGAAGAAATCAATGCCGGATTTCCCGATCAGCACTC
TGTTGCGCATTTCATGGTCATGCCCGCGTTTGCGCCCAACGACCTTGTCA
TGATTGAGGGCACCTTTCCGGCCGCGCGCTACTTTGCTTATCAAACCTTC
GACGGAAACTTCTCCCCTGTTGGTTTTCTGCGCGATGCCCAGATCCAACC
AGTGACAGGGGAACGTAACCCCTTTGCAAAGGGTCCGAAAGACGACATGA
AAGACGCTCATAGTAAGAATGACGTCAAGTACCGCATCTACCTTACCAAG
GACGGCAAAAGGGGTTTCCCGAACGAGCTGGCAATGGCCAAATCCAACTT
TGCTCTGGGCAGCCTAGTCATCGTGGTCTTGCGCCTCTACGGCGTGGATT
CCCAAGCAAAGTTTACGCACCCTGAACTGGCGCCATGGGGGTATGTGCCG
CCGGTTCAAGTCAGCACCAAGATTATGGGAACCTTTATGCCGACGGCCAC
CGACATTGTTTGGGAAACATACCCACAGTGTCCAATCAACAACACCATGG
TCGTGCGCGACACATTGACTGCCCTCACCAATTTGATCGATATGGTGGAC
GTGAGCAAGAAGACCTGTCCAAGTGAGAACGTGCCAGACAACTTCATGTA
CTATCAGCCACAAAATCCGACACCGCCTGGCCTTGGGCTGGGTATGCTGC
CTCCCCCGCCTTCCCGAACGCCGTTTCCTAATCAAGATGCCTCCTTTTTA
GTAGCTTGTGCAAGCAATCGGCCTCAATACGTCCGTAGCAGCGACCTCGT
GGTGCTTGCACGGGGGCACTTGCCTCGGACGCCTGGAGGACTGAACGACG
CGCCCTTTGTCGGAGACTTCCTAAACTACCAAGTGCGGTACGCATCCTTT
TCTGTCTACGATCTTAACTTGCCAGGACCGGTGCTACGCAGTGTCTCTGA
CAACGAGTTTCGCACCTTCTATAGCAAGATGTACGGGAACGCCACGTGGG
AGCTCACCTATGGCCGCAATGTTTCGTTGGTGGTGGTCAAGAATTTGGCT
GTTTTGGAACGGTGCAACGTGGACACGTCGGAAAGCTTCGTAGTGGAGTT
GGACCAGCATGAACCGGTGTCGGACTGGTTCGGCATTGTTTATCGCGAAG
TGTTGCCGCAGGGCCTGGCGATCAACACCACTCCCAAGGCTGCCACACAG
CTGGTCGCAAAGAAGAGATTATCCATCTATGACGAGTCGATCTATGACGC
CAAACAAGCTATTTGCAGAACGGGCGCGGATGAGGAAATTTGCGATCCTA
ACCCTTACCGCGTCGCCCAAACTATGAAGATGCACACGCCCCGCATCGAC
TACTTTTTGTGTAGTCAATCGGGCGTCCTGCACGTAGCGCCACCGGCCAC
AATCGATCCTTTCGTGGGCAAAGGATACCCGCTGCTGGCCGATACAGCGT
GGGGTGGTAATGCACACGACAACCTGGCGCCCGAGGACGTCCAGGCGTGC
ATCAACCGGACGACAGGCCTAGCTGAGGGTCTTCTCCGTGCCTACTCACC
GTGTGCTCAGATACATTTGTACCAGGCCCAACGCCCTGTTAAAGTAGTTG
CGCCGGGGCAGATTGGACTGTGGGACGTGTCTGTGATCACCACAGCCACC
GAGGTGCCAACTCCGGTGGTGGTGGGAGTCTCCATATTAGGCAAGACAGC
CGATGAGGCCCCTTTCCTGGTCGAGGTGGAGCTGTGCGGCAGCACGTTCG
TGTCGGATCATCACTGGCGGTGCAGTAATGAGCCACCCACTGATAACACC
TGGCTGCTTCCCACATTCCGGGAGAACTCTGACTGGAAGCCGGCGACATG
GGCGAGATGTGCGAGTTGTACGGAGGGGGCTGCCTTATTTGGCGCCATGG
CTCCCGCCACCATGCGATCAAAAGCTGCAGCACAGACCCTAAATGCTGTA
GCAGCCCAGAAGATAAACAATAGAGCTCATCTCGAGCCAATTAATCAAGC
GCCCCCACTGCATTTCTTTTCTCAGGACGGCCGCCGCTACATTCAGCCCT
CGCCTCGGTTAGACCAAGAGGCTGAAGAAGCCTGGCGTGAATGGCAGCTG
GCCAAAGAGGAGGCCAACAGCGCATGGCGGGCATGGCGTCGTGCGAAGAA
GCAGCAGCAGCAGCAGCACAATGGAACTAGCATGGGCGATGGAACCACCA
TTTTATCGAAGGATGAGCAGGATATCTTCGCTACTTTTATGGCGTCCAGC
AGGAATAGTACAATCAACACCAATACCACCACTTCGTCGACGGACTGGAG
GGATCATATGAACGTGACCGCGGCGGATGTAGCTTTGCAATGGGCCAAAC
CTCGCCCTACTCAGATACATAGTTATTATTGCCGTCTAGTCCTGCCCAAT
CCGGGAGTAGTGGATGGGCTCGGCGCCACTACACGAGGACGTAGCGTGGT
GGGCGGATGAGGAAGTTTGAATTAGACAGAAAAGGGAGGAATTAAAAAAA
GAAATAATATTGGATTGAAA

protein sequence of NO27G00660.1

>NO27G00660.1-protein ID=NO27G00660.1-protein|Name=NO27G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1019bp
MQQMVFLSTIHNKDHPLHRLDIQQSRETPSPPTNHLVFVLPSMWDKCCSL
LLVLPLICGGQAQILFNNKANQASADASPTALSIMLQKLKNVAIKAMNER
GYTHLAEVTVAQNKPIGRWGKLESSAAESSMASEGSSLVTLDLPPEPLAE
LINVMDLYQSLFGTTPDFSDINNTASFYQKVQEIILTSAPSFSLACQPSF
RVWPEEINAGFPDQHSVAHFMVMPAFAPNDLVMIEGTFPAARYFAYQTFD
GNFSPVGFLRDAQIQPVTGERNPFAKGPKDDMKDAHSKNDVKYRIYLTKD
GKRGFPNELAMAKSNFALGSLVIVVLRLYGVDSQAKFTHPELAPWGYVPP
VQVSTKIMGTFMPTATDIVWETYPQCPINNTMVVRDTLTALTNLIDMVDV
SKKTCPSENVPDNFMYYQPQNPTPPGLGLGMLPPPPSRTPFPNQDASFLV
ACASNRPQYVRSSDLVVLARGHLPRTPGGLNDAPFVGDFLNYQVRYASFS
VYDLNLPGPVLRSVSDNEFRTFYSKMYGNATWELTYGRNVSLVVVKNLAV
LERCNVDTSESFVVELDQHEPVSDWFGIVYREVLPQGLAINTTPKAATQL
VAKKRLSIYDESIYDAKQAICRTGADEEICDPNPYRVAQTMKMHTPRIDY
FLCSQSGVLHVAPPATIDPFVGKGYPLLADTAWGGNAHDNLAPEDVQACI
NRTTGLAEGLLRAYSPCAQIHLYQAQRPVKVVAPGQIGLWDVSVITTATE
VPTPVVVGVSILGKTADEAPFLVEVELCGSTFVSDHHWRCSNEPPTDNTW
LLPTFRENSDWKPATWARCASCTEGAALFGAMAPATMRSKAAAQTLNAVA
AQKINNRAHLEPINQAPPLHFFSQDGRRYIQPSPRLDQEAEEAWREWQLA
KEEANSAWRAWRRAKKQQQQQHNGTSMGDGTTILSKDEQDIFATFMASSR
NSTINTNTTTSSTDWRDHMNVTAADVALQWAKPRPTQIHSYYCRLVLPNP
GVVDGLGATTRGRSVVGG*

mRNA from alignment at chr27:245516..249660-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G00660.1 ID=NO27G00660.1|Name=NO27G00660.1|organism=Nannochloropsis oceanica|type=mRNA|length=4145bp|location=Sequence derived from alignment at chr27:245516..249660- (Nannochloropsis oceanica)
TGCTTGTCGTTCCTCTCAAGCTTTCTGTTCGGCCCACGACGCATCGTTCT
CAGCTTCTCTTTCTTCCCCTCATGTTCTAACTCGAACACACCGCCATTTC
CTCATGCAACAAATGGTTTTCTTGAGCACAATTCACAACAAGGACCATCC
TTTACATAGATTGGACATTCAACAATCCCGCGAGACCCCTTCTCCACCCA
CCAATCACCTCGTGTTCGTCTTGCCAAGCATGTGGGACAAGTGCTGCAGT
CTCCTCCTTGTGCTCCCTTTGATTTGCGGTGGTCAAGCTCAAATCCTATT
CAATAATAAGGCCAACCAAGCATCAGCGGATGCCTCTCCGACGGCATTGT
CCATCATGCTTCAAAAACTCAAGAATGTCGCTATAAAGGCCATGAAGTAA
GTCACGTGGGCGGCTCGAAGATCGATCTCCTCCTCCCCATGCGCCTATGT
GGGCCAACAAACTCTGTCGATTTTTTCCAACCCTCAACACAGCGAGCGTG
GTTACACTCATCTGGCTGAGGTGACTGTGGCGCAAAACAAGCCAATTGGA
CGCTGGGGCAAGCTGGAGTCGTCAGCGGCGGAATCCAGCATGGCCTCAGA
GGGCAGCAGTCTCGTGACCCTCGACCTGCCCCCTGAGCCCCTAGCCGAGC
TCATCAACGTCATGGACTTGTATCAGTCCCTTTTTGGCACCACGCCTGAT
GTACGTTGTCATCTTTTCCTGTGCGTCCTACCCGATGTGTTCTGCTCTAT
CCAACCTCCTGTCTCTCTCTCTCTCTCTCTCTCTCTATCTATCTATCTAT
CTATCTATCTCTATCTCTATCTCTCGTGTGCCACCTAAGCGCCCCAGCTA
AAAATATATATTCTAACTGCCTTCCGCATACACACCTGAATAGTTTTCTG
ATATTAACAACACGGCTAGTTTTTATCAAAAAGTTCAAGAAATCATCCTC
ACCTCCGCACCGTAAGTACTGGGATAATATCTTCTGACCTCGCTGCTTTC
ATTTAACTCATCACTCGCCTTACATCCACACACAATTTACACAGCTCCTT
TTCACTCGCCTGCCAACCGAGTTTCCGTGTCTGGCCTGAAGAAATCAATG
CCGGATTTCCCGATCAGCACTCTGTTGCGCATTTCATGGTCATGCCCGCG
TTTGCGCCCAACGACCTTGTCATGATTGAGGGCACCTTTCCGGCCGCGCG
CTACTTTGCTTATCAAACCTTCGACGGAAACTTCTCCCCTGTTGGTTTTC
TGCGCGATGCCCAGATCCAACCAGTGACAGGGGAACGTAACCCCTTTGCA
AAGGGTCCGAAAGACGACATGAAAGACGCTCATAGTAAGAATGACGTCAA
GTACCGCATCTACCTTACCAAGGACGGCAAAAGGGGTTTCCCGAACGAGC
TGGCAATGGCCAAATCCAACTTTGCTCTGGGCAGCCTAGTCATCGTGGTC
TTGCGCCTCTACGGCGTGGATTCCCAAGCAAAGTTTACGCACCCTGAACT
GGCGCCATGGGGGTATGTGCCGCCGGTTCAAGTCAGCACCAAGATTATGG
GGTACGTAATAGGCGTATGGTTACGGGGAATAGGAAGCCAAAAGACGAAC
AGAAAAGTATCATATCTATATCCGCCAACGGTATTATGTTACCATTTAAT
AGAACCTTTATGCCGACGGCCACCGACATTGTTTGGGAAACATACCCACA
GTGTCCAATCAACAACACCATGGTCGTGCGCGACACATTGACTGCCCTCA
CCAATGTAAGTCATATGTGTACGCTTTGTTATGCTGTACTCATTCAAGTC
AAATATATATATAATTCAACTCAATAAATCACAGTTGATCGATATGGTGG
ACGTGAGCAAGAAGACCTGTCCAAGTGAGAACGTGCCAGACAACTTCATG
TACTATCAGCCACAAAATCCGACACCGCCTGGCCTTGGGCTGGGTATGCT
GCCTCCCCCGCCTTCCCGAACGCCGTTTCCTAATCAAGATGCCTCCTTTT
TAGTAGCTTGTGCAAGCAATCGGCCTCAATACGTCCGTAGCAGCGACCTC
GTGGTGCTTGCACGGGGGCACTTGCCTCGGACGCCTGGAGGACTGAACGA
CGCGCCCTTTGTCGGAGACTTCCTAGTGAGTGCCTCTGCAAAATTATCAG
GGGGAGGGGAGTAGAAAAGGCGCCTTATGGTGCACAGAGAAAATGAAATG
CGCTCCAATTGTAACGAATCATCGATCTACTCCTACACATACAGAACTAC
CAAGTGCGGTACGCATCCTTTTCTGTCTACGATCTTAACTTGCCAGGACC
GGTGCTACGCAGTGTCTCTGACAACGAGTTTCGCACCTTCTATAGCAAGA
TGTACGGGAACGCCACGTGGGAGCTCACCTATGGCCGCAATGTTTCGTTG
GTGGTGGTCAAGAATTTGGCTGTTTTGGAACGGTGCAACGTGGACACGTC
GGAAAGCTTCGTAGTGGAGTTGGACCAGCATGAACCGGTACACAAAAAAT
AGAGGTCAGGTTTCTAAGCATTTTTTTTTCTTATTTTCCTAATACTCATT
GTACACAAACGCAGGTGTCGGACTGGTTCGGCATTGTTTATCGCGAAGTG
TTGCCGCAGGGCCTGGCGATCAACACCACTCCCAAGGCTGCCACACAGCT
GGTCGCAAAGAAGAGATTATCCATCTATGACGAGTCGATCTATGACGCCA
AACAAGCTATTTGCAGAACGGGCGCGGATGAGGAAATTTGCGAGTGAGTT
CTATGGCTGTGAATGATGCAAGGATTCGTCATTAGATACTCAAAGTTTTC
TATGCACTCTTCGACTTTCTTTTCTACAACGACAGTCCTAACCCTTACCG
CGTCGCCCAAACTATGAAGATGCACACGCCCCGCATCGACTACTTTTTGT
GTAGTCAATCGGGCGTCCTGCACGTAGCGCCACCGGCCACAATCGATCCT
TTCGTGGGCAAAGGATACCCGCTGCTGGCCGATACAGCGTGGGGTGGTAA
TGCACACGACAACCTGGCGCCCGAGGACGTCCAGGCGTGCATCAACCGGA
CGACAGGCCTAGCTGAGGGTCTTCTCCGTGCCTACTCACCGTGTGCTCAG
ATACATTTGTACCAGGCCCAACGCCCTGTTAAAGTAGTTGCGCCGGGGCA
GATTGGACTGTGGGACGTGTCTGTGATCACCACAGCCACCGAGGTGCCAA
CTCCGGTGGTGGTGGGAGTCTCCATATTAGGTACGTCTTCCATTTATGGT
TAGAAAATCGGGGTTTGGTTCATCGAGCAACCCCCCCTCGCTTGTATTCG
GTCAAAATAAAACAGGCAAGACAGCCGATGAGGCCCCTTTCCTGGTCGAG
GTGGAGCTGTGCGGCAGCACGTTCGTGTCGGATCATCACTGGCGGTGCAG
TAATGAGCCACCCACTGATAACACCTGGCTGCTTCCCACATTCCGGGAGA
ACTCTGACTGGAAGCCGGCGACATGGGCGAGATGTGCGAGTTGTACGGAG
GGGGCTGCCTTATTTGGCGCCATGGCTCCCGCCACCATGCGATCAAAAGC
TGCAGCACAGACCCTAAATGCTGTAGCAGCCCAGAAGATAAACAATAGAG
CTCATCTCGAGCCAATTAATCAAGCGCCCCCACTGCATTTCTTTTCTCAG
GACGGCCGCCGCTACATTCAGCCCTCGCCTCGGTTAGACCAAGAGGCTGA
AGAAGCCTGGCGTGAATGGCAGCTGGCCAAAGAGGAGGCCAACAGCGCAT
GGCGGGCATGGCGTCGTGCGAAGAAGCAGCAGCAGCAGCAGCACAATGGA
ACTAGCATGGGCGATGGAACCACCATTTTATCGAAGGATGAGCAGGATAT
CTTCGCTACTTTTATGGCGTCCAGCAGGAATAGTACAATCAACACCAATA
CCACCACTTCGTCGACGGACTGGAGGGATCATATGAACGTGACCGCGGCG
GATGTAGCTTTGCAATGGGCCAAACCTCGCCCTACTCAGATACATAGTTA
TTATTGCCGTCTAGTCCTGCCCAATCCGGGAGTAGTGGATGGGCTCGGCG
CCACTACACGAGGACGTAGCGTGGTGGGCGGATGAGGAAGTTTGAATTAG
ACAGAAAAGGGAGGAATTAAAAAAAGAAATAATATTGGATTGAAA

Coding sequence (CDS) from alignment at chr27:245516..249660-

>NO27G00660.1 ID=NO27G00660.1|Name=NO27G00660.1|organism=Nannochloropsis oceanica|type=CDS|length=3057bp|location=Sequence derived from alignment at chr27:245516..249660- (Nannochloropsis oceanica)
ATGCAACAAATGGTTTTCTTGAGCACAATTCACAACAAGGACCATCCTTT
ACATAGATTGGACATTCAACAATCCCGCGAGACCCCTTCTCCACCCACCA
ATCACCTCGTGTTCGTCTTGCCAAGCATGTGGGACAAGTGCTGCAGTCTC
CTCCTTGTGCTCCCTTTGATTTGCGGTGGTCAAGCTCAAATCCTATTCAA
TAATAAGGCCAACCAAGCATCAGCGGATGCCTCTCCGACGGCATTGTCCA
TCATGCTTCAAAAACTCAAGAATGTCGCTATAAAGGCCATGAACGAGCGT
GGTTACACTCATCTGGCTGAGGTGACTGTGGCGCAAAACAAGCCAATTGG
ACGCTGGGGCAAGCTGGAGTCGTCAGCGGCGGAATCCAGCATGGCCTCAG
AGGGCAGCAGTCTCGTGACCCTCGACCTGCCCCCTGAGCCCCTAGCCGAG
CTCATCAACGTCATGGACTTGTATCAGTCCCTTTTTGGCACCACGCCTGA
TTTTTCTGATATTAACAACACGGCTAGTTTTTATCAAAAAGTTCAAGAAA
TCATCCTCACCTCCGCACCCTCCTTTTCACTCGCCTGCCAACCGAGTTTC
CGTGTCTGGCCTGAAGAAATCAATGCCGGATTTCCCGATCAGCACTCTGT
TGCGCATTTCATGGTCATGCCCGCGTTTGCGCCCAACGACCTTGTCATGA
TTGAGGGCACCTTTCCGGCCGCGCGCTACTTTGCTTATCAAACCTTCGAC
GGAAACTTCTCCCCTGTTGGTTTTCTGCGCGATGCCCAGATCCAACCAGT
GACAGGGGAACGTAACCCCTTTGCAAAGGGTCCGAAAGACGACATGAAAG
ACGCTCATAGTAAGAATGACGTCAAGTACCGCATCTACCTTACCAAGGAC
GGCAAAAGGGGTTTCCCGAACGAGCTGGCAATGGCCAAATCCAACTTTGC
TCTGGGCAGCCTAGTCATCGTGGTCTTGCGCCTCTACGGCGTGGATTCCC
AAGCAAAGTTTACGCACCCTGAACTGGCGCCATGGGGGTATGTGCCGCCG
GTTCAAGTCAGCACCAAGATTATGGGAACCTTTATGCCGACGGCCACCGA
CATTGTTTGGGAAACATACCCACAGTGTCCAATCAACAACACCATGGTCG
TGCGCGACACATTGACTGCCCTCACCAATTTGATCGATATGGTGGACGTG
AGCAAGAAGACCTGTCCAAGTGAGAACGTGCCAGACAACTTCATGTACTA
TCAGCCACAAAATCCGACACCGCCTGGCCTTGGGCTGGGTATGCTGCCTC
CCCCGCCTTCCCGAACGCCGTTTCCTAATCAAGATGCCTCCTTTTTAGTA
GCTTGTGCAAGCAATCGGCCTCAATACGTCCGTAGCAGCGACCTCGTGGT
GCTTGCACGGGGGCACTTGCCTCGGACGCCTGGAGGACTGAACGACGCGC
CCTTTGTCGGAGACTTCCTAAACTACCAAGTGCGGTACGCATCCTTTTCT
GTCTACGATCTTAACTTGCCAGGACCGGTGCTACGCAGTGTCTCTGACAA
CGAGTTTCGCACCTTCTATAGCAAGATGTACGGGAACGCCACGTGGGAGC
TCACCTATGGCCGCAATGTTTCGTTGGTGGTGGTCAAGAATTTGGCTGTT
TTGGAACGGTGCAACGTGGACACGTCGGAAAGCTTCGTAGTGGAGTTGGA
CCAGCATGAACCGGTGTCGGACTGGTTCGGCATTGTTTATCGCGAAGTGT
TGCCGCAGGGCCTGGCGATCAACACCACTCCCAAGGCTGCCACACAGCTG
GTCGCAAAGAAGAGATTATCCATCTATGACGAGTCGATCTATGACGCCAA
ACAAGCTATTTGCAGAACGGGCGCGGATGAGGAAATTTGCGATCCTAACC
CTTACCGCGTCGCCCAAACTATGAAGATGCACACGCCCCGCATCGACTAC
TTTTTGTGTAGTCAATCGGGCGTCCTGCACGTAGCGCCACCGGCCACAAT
CGATCCTTTCGTGGGCAAAGGATACCCGCTGCTGGCCGATACAGCGTGGG
GTGGTAATGCACACGACAACCTGGCGCCCGAGGACGTCCAGGCGTGCATC
AACCGGACGACAGGCCTAGCTGAGGGTCTTCTCCGTGCCTACTCACCGTG
TGCTCAGATACATTTGTACCAGGCCCAACGCCCTGTTAAAGTAGTTGCGC
CGGGGCAGATTGGACTGTGGGACGTGTCTGTGATCACCACAGCCACCGAG
GTGCCAACTCCGGTGGTGGTGGGAGTCTCCATATTAGGCAAGACAGCCGA
TGAGGCCCCTTTCCTGGTCGAGGTGGAGCTGTGCGGCAGCACGTTCGTGT
CGGATCATCACTGGCGGTGCAGTAATGAGCCACCCACTGATAACACCTGG
CTGCTTCCCACATTCCGGGAGAACTCTGACTGGAAGCCGGCGACATGGGC
GAGATGTGCGAGTTGTACGGAGGGGGCTGCCTTATTTGGCGCCATGGCTC
CCGCCACCATGCGATCAAAAGCTGCAGCACAGACCCTAAATGCTGTAGCA
GCCCAGAAGATAAACAATAGAGCTCATCTCGAGCCAATTAATCAAGCGCC
CCCACTGCATTTCTTTTCTCAGGACGGCCGCCGCTACATTCAGCCCTCGC
CTCGGTTAGACCAAGAGGCTGAAGAAGCCTGGCGTGAATGGCAGCTGGCC
AAAGAGGAGGCCAACAGCGCATGGCGGGCATGGCGTCGTGCGAAGAAGCA
GCAGCAGCAGCAGCACAATGGAACTAGCATGGGCGATGGAACCACCATTT
TATCGAAGGATGAGCAGGATATCTTCGCTACTTTTATGGCGTCCAGCAGG
AATAGTACAATCAACACCAATACCACCACTTCGTCGACGGACTGGAGGGA
TCATATGAACGTGACCGCGGCGGATGTAGCTTTGCAATGGGCCAAACCTC
GCCCTACTCAGATACATAGTTATTATTGCCGTCTAGTCCTGCCCAATCCG
GGAGTAGTGGATGGGCTCGGCGCCACTACACGAGGACGTAGCGTGGTGGG
CGGATGA

Synonyms

Publications