NO27G00350.1, NO27G00350.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G00350.1
Unique Name	NO27G00350.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2501
Alignment location	chr27:127583..133011 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:127583..133011 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G00350.1 vs.
Match: GAY05898.1 (GMP synthase [Pythium insidiosum])

HSP 1 Score: 742.3 bits (1915), Expect = 1.100e-210
Identity = 351/521 (67.37%), Postives = 424/521 (81.38%), Query Frame = 0

Query:    8 DRPQIAILDFGSQYSHLIARRVREINVFCELYSCLVKGEVLRKNQVVGIILSGGPNSVYEKDSPHVDADVWAYIEEQSIPVMGICYGLQELSHHFGAKVAPGEKREYGKAMVSRAKGHEEAADVLFKGLPESFQMWMSHGDKLHSLPEGFVNIGTTSNSEHAAIANIEKKRFGLQFHPEVTHSIGGLQILRNFVVGVVGAPTDWNMADIAKEFIEAVRVKVGPTGKVIGAVSGGVDSSVAAVLLNKAIGDRFHAVMVDSGCLRQDEGAQCVERLRNRMGINLHLVDAQDLFLDKLAGVSDPETKRKIIGNTFIEVFDQEAHRIGECDFLLQGTLYPDVIESISYKGPSATIKSHHNVGGLPDRMKLQLIEPLRELFKDEVRALGIALGLDEESVWRHPFPGPGLAIRIIGDVTREKLTVLRQADVILLDELHKNGIYREIAQAFCVLTNCKSVGVMGDGRTYDYLCGIRLVSSTDYMTADWYRIDWDILAKISTRIINEVQGINRCAYDCSSKPPATIEWE 529
            +R  IAILDFGSQYSHLIARRVRE++VFCELYSCLV+ E L+K+++ GII SGGPNSV++K +PHV   VW  IEEQ +PV+GICYGLQEL+  F   VAP E+REYGKA+V +   +      LF GLP+ FQ+WMSHGDKL ++PEGFV+I  T NS+H AI N+EK+ +G+QFHPEVTHS  G  IL+NFVV + GAPTDW+M  IA  FIE VR  VGP G VIGAVSGGVDSSVAAVLL +A+GDRFHAV++D+G LR+DE  + VERL+ ++GINL  +DA D FL  LAGV++PETKRK IGN FIE+F +EA RIG+ DFLLQGTLYPDVIESISYKGPSATIK+HHNVGGLP++M L+LIEPLRELFKDEVR LG+ALG+DEESVWRHPFPGPGLAIR++G++T+E L  LRQAD I L+EL  +G Y+   QAFCVL   KSVGVMGDGRTY+ +  IR VS++DYMTADWY + +++L ++S RIINEV+G+NR  YD SSKPPATIEWE
Sbjct:    9 NREHIAILDFGSQYSHLIARRVRELHVFCELYSCLVEPEELKKHKLKGIIFSGGPNSVFDKGAPHVHPGVWKLIEEQKLPVLGICYGLQELAFTFKGTVAPCERREYGKAIVHK---NGNGCGGLFDGLPDEFQVWMSHGDKLTAVPEGFVDIAYTENSQHTAIVNLEKRFYGIQFHPEVTHSPLGKDILKNFVVNICGAPTDWDMRSIADAFIEEVRTMVGPEGHVIGAVSGGVDSSVAAVLLQRALGDRFHAVLIDNGLLRKDESTEVVERLQKKLGINLKCIDASDRFLAALAGVTEPETKRKTIGNLFIEIFQEEAKRIGKVDFLLQGTLYPDVIESISYKGPSATIKTHHNVGGLPEKMDLKLIEPLRELFKDEVRQLGMALGIDEESVWRHPFPGPGLAIRVLGEITKEALDTLRQADAIFLEELRNSGHYKTTGQAFCVLLPVKSVGVMGDGRTYEKVVAIRAVSTSDYMTADWYHMPYEVLGRMSNRIINEVRGVNRVVYDISSKPPATIEWE 526

The following BLAST results are available for this feature:

BLAST of NO27G00350.1 vs.

BLAST of NO27G00350.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
GAY05898.1	1.100e-210	67.37	GMP synthase [Pythium insidiosum]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G00350	NO27G00350	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00350.1	NO27G00350.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00350.1.cds1	NO27G00350.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds2	NO27G00350.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds3	NO27G00350.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds4	NO27G00350.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds5	NO27G00350.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds6	NO27G00350.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds7	NO27G00350.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds8	NO27G00350.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds9	NO27G00350.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds10	NO27G00350.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds11	NO27G00350.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds12	NO27G00350.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds13	NO27G00350.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds14	NO27G00350.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00350.1.cds15	NO27G00350.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:127583..133011-
coding sequence from alignment at chr27:127583..133011-

mRNA sequence

>NO27G00350.1 ID=NO27G00350.1|Name=NO27G00350.1|organism=Nannochloropsis oceanica|type=mRNA|length=2501bp
CGCCCCACTTCCATTGCTTCTTTACGAGGCGGCCATTATGGTCACCGAGG
CAATGAACGACTGTGCTCGCCTTTCTTATTTTCCAGTTTCTCACCCCAAA
ATCCTCTTGGGTAAAACGTCCTGACTGAGCAAGCAGCATAGGCGGCGGTG
GCCTTACCATTGTCTTTGTCATGGCGGGGCGTCGGCCTGTCTATGTTGCT
GCTGCCCGTCAACCCGACGGCCAAATGCCCCCGCCTTCATTCATTCGCAG
GCCAAGTGCCTCCCACCTTCCCACCCACCACCTTACTGTCCTACCTTGCC
TTATGCGTCACAGCAAGTCCTGCCCCTGGTCGGCGGTGCAAGTGATGATT
TCCCTCGGATACTCCATCGGCCGCGGCGTACACTAACTCTCCCTCACTGC
CACTGCCCGCTCCATTTTCTCCTCAACCACAGGCCTTATTCCTCCACGCC
CAAGCGTTGTCAGCATGGACGGGCAACTCCACGTGGACCGGCCTCAGATA
GCCATCCTGGACTTTGGTTCCCAATACTCCCACTTAATCGCCCGCCGCGT
GCGTGAAATCAATGTCTTTTGCGAGCTCTATTCCTGCCTGGTGAAGGGCG
AGGTATTGCGAAAAAACCAGGTGGTGGGCATCATACTTTCGGGGGGTCCC
AACTCTGTGTACGAGAAAGACTCCCCCCATGTGGACGCGGATGTGTGGGC
TTATATTGAGGAGCAGAGCATCCCGGTCATGGGCATTTGCTACGGACTAC
AGGAGTTGTCGCACCATTTTGGCGCGAAAGTCGCACCGGGCGAGAAAAGG
GAGTACGGCAAGGCCATGGTCAGCCGGGCCAAGGGCCACGAGGAGGCGGC
CGATGTCTTATTTAAGGGTCTACCTGAGAGCTTTCAGATGTGGATGAGCC
ACGGCGACAAGCTGCACTCTCTCCCGGAGGGCTTTGTCAACATCGGCACG
ACCAGTAACTCGGAGCATGCGGCCATCGCCAACATTGAGAAAAAGCGCTT
TGGACTTCAGTTCCACCCAGAGGTCACGCACTCCATCGGCGGCCTTCAAA
TCCTCCGTAATTTCGTCGTGGGTGTCGTGGGTGCTCCCACCGACTGGAAC
ATGGCAGATATTGCCAAGGAATTCATCGAAGCGGTGCGGGTCAAAGTAGG
GCCTACGGGGAAGGTCATCGGCGCCGTCTCTGGAGGTGTAGACTCCTCTG
TGGCGGCCGTGTTGCTCAACAAAGCCATTGGTGATAGGTTTCACGCGGTG
ATGGTGGACTCGGGCTGCCTCCGCCAGGATGAGGGGGCGCAGTGCGTGGA
GCGGCTTCGGAACAGGATGGGCATCAACCTGCACCTGGTGGACGCCCAAG
ACCTCTTCCTCGACAAACTCGCCGGGGTATCCGACCCGGAAACCAAGCGC
AAGATCATCGGTAACACCTTCATTGAAGTCTTTGATCAAGAAGCACACCG
CATCGGCGAGTGTGACTTCCTCCTCCAGGGAACATTATACCCGGATGTGA
TCGAGTCCATCTCCTACAAGGGCCCCTCTGCCACCATCAAGTCTCACCAC
AACGTTGGTGGCCTTCCCGACCGGATGAAGCTTCAGCTCATCGAGCCCCT
CCGCGAACTCTTCAAGGACGAGGTCCGCGCCCTCGGGATTGCTCTCGGCC
TAGACGAGGAGAGTGTGTGGCGTCACCCTTTCCCCGGCCCAGGGCTGGCC
ATCCGAATTATTGGGGACGTCACCCGGGAAAAGCTGACCGTCCTGCGGCA
GGCGGACGTGATCCTTCTGGACGAATTGCACAAGAACGGCATCTACCGTG
AAATCGCTCAGGCCTTCTGTGTCCTCACCAACTGCAAGTCGGTTGGGGTT
ATGGGCGACGGACGCACGTACGATTACCTGTGTGGCATCCGCCTCGTCTC
CTCCACTGACTACATGACTGCCGATTGGTACCGCATCGACTGGGACATCC
TGGCCAAGATCTCCACCCGCATTATCAATGAGGTCCAGGGCATCAACCGC
TGTGCCTATGATTGCTCTTCCAAGCCCCCTGCCACCATTGAATGGGAGTA
AGAGATGGAGGATGGGAAGGACGGAGAGGAGGAGGGAGGGAGGGAAAGGT
GTGATGGCAATGCGTCTGGCAGCGACTGCATGCTTCGACTGAGTGGGAGG
AAGGTAATCAGACAGGAAGGGAATGAGAGATGGACGGAGGGACGGAGGAA
GGAAAGGAGAGGGTGCAGAAATGAACAGTAGGACGATCGAAAATATTGAC
CCAATCCAATTGTTGATTTTTATGCGTCGGGGAGTGAGGAAGGGTGTGAG
AGAGGGAGGGGAACCAGATAGGAATTCTTGGAAAGACATGGTTGATAATG
ATATTCATTGATTGAAATGCGAAATTATTTGTTGTGTTTCTGTGAGCCTG
TGAAAGAGCTAAAAGAAGGAAGAGGAGGAGGGAGAGGAGGGGTATGATGA
CGACGAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGG
A

protein sequence of NO27G00350.1

>NO27G00350.1-protein ID=NO27G00350.1-protein|Name=NO27G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=529bp
MDGQLHVDRPQIAILDFGSQYSHLIARRVREINVFCELYSCLVKGEVLRK
NQVVGIILSGGPNSVYEKDSPHVDADVWAYIEEQSIPVMGICYGLQELSH
HFGAKVAPGEKREYGKAMVSRAKGHEEAADVLFKGLPESFQMWMSHGDKL
HSLPEGFVNIGTTSNSEHAAIANIEKKRFGLQFHPEVTHSIGGLQILRNF
VVGVVGAPTDWNMADIAKEFIEAVRVKVGPTGKVIGAVSGGVDSSVAAVL
LNKAIGDRFHAVMVDSGCLRQDEGAQCVERLRNRMGINLHLVDAQDLFLD
KLAGVSDPETKRKIIGNTFIEVFDQEAHRIGECDFLLQGTLYPDVIESIS
YKGPSATIKSHHNVGGLPDRMKLQLIEPLRELFKDEVRALGIALGLDEES
VWRHPFPGPGLAIRIIGDVTREKLTVLRQADVILLDELHKNGIYREIAQA
FCVLTNCKSVGVMGDGRTYDYLCGIRLVSSTDYMTADWYRIDWDILAKIS
TRIINEVQGINRCAYDCSSKPPATIEWE*

mRNA from alignment at chr27:127583..133011-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G00350.1 ID=NO27G00350.1|Name=NO27G00350.1|organism=Nannochloropsis oceanica|type=mRNA|length=5429bp|location=Sequence derived from alignment at chr27:127583..133011- (Nannochloropsis oceanica)
CGCCCCACTTCCATTGCTTCTTTACGAGGCGGCCATTATGGTCACCGAGG
CAATGAACGACTGTGCTCGCCTTTCTTATTTTCCAGTTTCTCACCCCAAA
ATCCTCTTGGGTAAAACGTCCTGACTGAGCAAGCAGCATAGGCGGCGGTG
GCCTTACCATTGTCTTTGTCATGGCGGGGCGTCGGCCTGTCTATGTTGCT
GCTGCCCGTCAACCCGACGGCCAAATGCCCCCGCCTTCATTCATTCGCAG
GCCAAGTGCCTCCCACCTTCCCACCCACCACCTTACTGTCCTACCTTGCC
TTATGCGTCACAGCAAGTCCTGCCCCTGGTCGGCGGTGCAAGTGATGATT
TCCCTCGGATACTCCATCGGCCGCGGCGTACACTAACTCTCCCTCACTGC
CACTGCCCGCTCCATTTTCTCCTCAACCACAGGCCTTATTCCTCCACGCC
CAAGCGTTGTCAGCATGGACGGGCAACTCCACGTGGACCGGCCTCAGATA
GCCATCCTGGACTTTGGTTCCCAATACTCCCACTTAATCGCCCGCCGCGT
GCGTGAAATCAATGTCTTTTGCGAGCTCTATTCCTGCCTGGTGAAGGGCG
AGGTATTGCGAAAAAACCAGGTGGTGGGCATCATACTTTCGGGGGGTCCC
AACTCTGTGTACGAGGTAAGACAAGGCGCTGGGAGAAAGGTCGGGAGGGG
GTCGATTTAGGCCTGCCACCTTTCCTGGAGCGGCACATGCCTCTCGCCGC
CACTGATGCTCCCCCTCTGCCTTGCCATTCTCTCCGTTTTGTCGAGCACA
GAAAGACTCCCCCCATGTGGACGCGGATGTGTGGGCTTATATTGAGGAGC
AGAGCATCCCGGTCATGGGCATTTGCTACGGACTACAGGTAGGGAGGGAG
GGAGGGAGGGTGGGAAGGAGGGAGGGAGGGTGGAGGGGAAAAGAAGAAAG
GCTGCGAATAGGGAGGGAGGGAGGGAGGGAGGGAAGCAGGGATGAAGGGA
GCAGAGGGACTTGGTGATAGAAAGATTAATTGATGACTGGACTGATGGAT
GCGGTACGGCAAGATAGCAGCTGCAATAGCGCTTACTATAAGATTAAAGC
CCTTTCCCCTATTCACGCCGGTCCCTCCCTCCCTCTGTCCCTCCCTCCCT
CCTTCCTTCCTTTCTTCCAGGAGTTGTCGCACCATTTTGGCGCGAAAGTC
GCACCGGGCGAGAAAAGGGAGTACGGCAAGGCCATGGTCAGCCGGGCCAA
GGTAGGGAGGGAGGGAGGGAGGGAGAGAGGGAAGGAGGGAGGTGGGTCGG
GTCAAGCCCATTGAGTAATGAAGGGTAGACTCATGTCAATTTACCTACTC
TCCCTCCTTTCCTCCCTCCCTCTCTCTCTCTCTCTCCACCCCCTGCAGGG
CCACGAGGAGGCGGCCGATGTCTTATTTAAGGGTCTACCTGAGAGCTTTC
AGATGTGGATGAGCCACGGCGACAAGCTGCACTCTCTCCCGGAGGGGTGA
GGGAGGGAGGGAGGAAGGAAGGGAGGGTGGGAGGGAGGGAGGGAGGAAGG
GAGGGAAGGAGGGAGAGATGGGGAATGTGTGACGGCAACGTTTTAATGAC
CTGTCAGATATATTTATCTTTAAGGATTATTCACCTTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCTCTCCCTCCCCCAGCTTTGTCAACATCGGC
ACGACCAGTAACTCGGAGCATGCGGCCATCGCCAACATTGAGAAAAAGCG
CTTTGGACTTCAGTTCCACCCAGAGGTACACCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCTTGACTAGGTCACGCGCTCATTCTACCG
GCCTTCAAATCCTCCGTAGTTCCTCACCCTCCTTCCCTCCCTTCCTCCCT
CCCTCATTAGGTCACGCACTCCATCGGCGGCCTTCAAATCCTCCGTAATT
TCGTCGTGGGTGTCGTGGGTGCTCCCACCGACTGGAACATGGCAGATATT
GCCAAGGAATTCATCGAAGCGGTGCGTCCTCTCTCCCTCCCTCCTCCCTC
CTCCCTCCCTCCCTCCCCTCCCTCTTTTACCTTCTCTCTGGTCCCGCACA
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGGGTTCCACATTCTCGCCG
CGCCCGCCACCCTGACACCCTCCCTCCCTCCCTCCCGCCCTCCCGCCCTA
GGTGCGGGTCAAAGTAGGGCCTACGGGGAAGGTCATCGGCGCCGTCTCTG
GAGGTGTAGACTCCTCTGTGGCGGCCGTGTTGCTCAACAAAGCCATTGGT
GATAGGTAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAAGGAAGGAG
GAAACAAGACCTTGTCATATTGAAACAATATCAGGTCATCGCCTCGTTTA
CTGTAATCCCTCCCTCCCTCCCTCCCTCCCACCCTTTTTCAGGTTTCACG
CGGTGATGGTGGACTCGGGCTGCCTCCGCCAGGATGAGGGGGCGCAGTGC
GTGGAGCGGCTTCGGAACAGGTGGCGAGGGAGGGAGGGAGGAAGGGAGGG
AGGGAGGGAGGGAGGGACGGACAGGAGGAGGGGGATGTACGGAGGGGGGG
GGGGGAACAATGCAGGAAGGGAAGAAGGAAAGGAGCGAGAAACATCCAAG
CGCATCGGCCACATTTCCCCCATCGTCTTCACACCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCAGGATGGGCAT
CAACCTGCACCTGGTGGACGCCCAAGACCTCTTCCTCGACAAACTCGCCG
GGGTATCCGACCCGGAAACCAAGGTCCGTCTCTCCCTCCCTCCCTCCCTC
CCTCCTTCCCTCTCTCCCTCCCTCCCTCCTTCCTTCCCACCCACCCACAC
TTCCTTCCTCCCTCCCTCCCTCCCTCCCTTTCCCCAGCGCAAGATCATCG
GTAACACCTTCATTGAAGTCTTTGATCAAGAAGCACACCGCATCGGCGAG
TGTGACTTCCTCCTCCAGGGAACATTATACCCGGATGTGATCGAGTCCAT
CTCCTACAAGGGTGAGGAGGGAAGGAGGCATGGGAAGAGGGAAGGGGAAG
GGGGGAGGGGTGGAGGGGTGGAGGGAGGGAAGGCTGGAAGAGTGACTCTG
ATTTGATACCTAGATCAAAAAGAACTTACGCTTGTGTCTTTCTTCCTCTC
CTTCCTCCCTCCCTCCCTCCCTCCCTCTCTTGGCCCCTCTGCCACCATCA
AGTCTCACCACAACGTCTGTGCCCTCCCTCCCTCATCCCTCCTCCCTCCC
TCCCTCACTTCCTCCTCCCTACCTCCCTCCCTCCCTAGGCCCCTCTGCCA
CCATCAAGTCTCACCACAACGTTGGTGGCCTTCCCGACCGGATGAAGCTT
CAGCTCATCGAGCCCCTCCGCGAACTCTTCAAGGACGAGGTACGCCCTCC
CTCCCTCCCTTTCTCCCTCCCTCCCTCCCGCTCGCTTCTCCTCCTTGTGT
CCATGTCCTCAAGCCCGTCTCCAGGACACCCATGCATGTCCCGGCATCTA
TATCCTACCTCTCATACATGCCATGTCCTCACTCATACCCCACACATGCA
TCCACGCATGATTCCGTATCCATATCCCACCTCTCACACATGCATCTACA
TCGTACTCTCACATACACCCATATCTCACACGGACACCCATATATCCTCC
ACATTCCACATCCATATCCAGCACGTGCTTACGATATTTCCCACATACAC
GCATTTTTCCCACATGCATGCATACCTCCCCCTGAGACTCATATCCCCCA
CATCCCCCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCTCAGGTCC
GCGCCCTCGGGATTGCTCTCGGCCTAGACGAGGAGAGTGTGTGGCGTCAC
CCTTTCCCCGGCCCAGGGCTGGCCATCCGAATTATTGGGGACGTCACCCG
GGAAAAGCTGACCGTCCTGCGGCAGGTAGGGAGGGAGGGAGGGAGGGAGG
GTGGGAGGAAGGAAGGGAAGCAGGCTGGCCATGATATCATTATTTTTTGG
CTCACTGTCCCCCCTTCCTTCCCTACCTCCTCTAGGCGGACGTGATCCTT
CTGGACGAATTGCACAAGAACGGCATCTACCGTGAAATCGCTCAGGTAGG
GAGGAAGGGAAGAGGAACGGAAGGATAGGTGTATGCTTGTAGTACTCCTG
TGTGTGCTGTATATGAATTCCTTCATCCATCCCTCCCTTCCTCCCTCCCT
CCCCACTCCTCAGGCCTTCTGTGTCCTCACCAACTGCAAGTCGGTTGGGG
TTATGGGCGACGGACGCACGTACGATTACCTGTGTGGCATCCGCCTCGTC
TCCTCCACTGACTACATGACTGCCGATTGGTACCGCATCGACTGGGACAT
CCTGGCCAAGTACGTCCTACATGTTTATATATATATATATATATACATAT
ATATATATGTCTGTGTGTATGTGTGTCTATGTCTGTGTCTATCTCTCTGT
CTCTCTGTCTGTCTGTCTGTCTGGTACCGCATCGACTGAGACATTCTCGT
CAAGTACATCCTTCCCTCCTCCCACCCTCCCTCCCTCATTTCTTTCGTAT
CTCCTTCCTGTAGATACTCACTCATATGTGTATATATAAATATGTGTGTC
TGTGTCTGTGTCTGTGTCTGTGTCTGTGTCTGTGTCTGTGTGTCTGTGTA
TGTTTCTACGTGTGAGCAAGCAAGGAAGCAAGCAAGGTCTTCCTCCTTCC
CTCCCTCCTTCCCTCCCTTCTTCCCTTGCCTCAGGTTTTGCATCCGCTTG
TTTTCCTCTTCGAGCCTGTCAACCTAAAATGTAAATCATTATCCATCCCT
TGCACCCTCCTTCTCTCCGTCCTTCCCTCCCTCAGGATCTCCACCCGCAT
TATCAATGAGGTCCAGGGCATCAACCGCTGTGCCTATGATTGCTCTTCCA
AGCCCCCTGCCACCATTGAATGGGAGTAAGAGATGGAGGATGGGAAGGAC
GGAGAGGAGGAGGGAGGGAGGGAAAGGTGTGATGGCAATGCGTCTGGCAG
CGACTGCATGCTTCGACTGAGTGGGAGGAAGGTAATCAGACAGGAAGGGA
ATGAGAGATGGACGGAGGGACGGAGGAAGGAAAGGAGAGGGTGCAGAAAT
GAACAGTAGGACGATCGAAAATATTGACCCAATCCAATTGTTGATTTTTA
TGCGTCGGGGAGTGAGGAAGGGTGTGAGAGAGGGAGGGGAACCAGATAGG
AATTCTTGGAAAGACATGGTTGATAATGATATTCATTGATTGAAATGCGA
AATTATTTGTTGTGTTTCTGTGAGCCTGTGAAAGAGCTAAAAGAAGGAAG
AGGAGGAGGGAGAGGAGGGGTATGATGACGACGAGGAAAAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGAAGGAGGA

Coding sequence (CDS) from alignment at chr27:127583..133011-

>NO27G00350.1 ID=NO27G00350.1|Name=NO27G00350.1|organism=Nannochloropsis oceanica|type=CDS|length=1587bp|location=Sequence derived from alignment at chr27:127583..133011- (Nannochloropsis oceanica)
ATGGACGGGCAACTCCACGTGGACCGGCCTCAGATAGCCATCCTGGACTT
TGGTTCCCAATACTCCCACTTAATCGCCCGCCGCGTGCGTGAAATCAATG
TCTTTTGCGAGCTCTATTCCTGCCTGGTGAAGGGCGAGGTATTGCGAAAA
AACCAGGTGGTGGGCATCATACTTTCGGGGGGTCCCAACTCTGTGTACGA
GAAAGACTCCCCCCATGTGGACGCGGATGTGTGGGCTTATATTGAGGAGC
AGAGCATCCCGGTCATGGGCATTTGCTACGGACTACAGGAGTTGTCGCAC
CATTTTGGCGCGAAAGTCGCACCGGGCGAGAAAAGGGAGTACGGCAAGGC
CATGGTCAGCCGGGCCAAGGGCCACGAGGAGGCGGCCGATGTCTTATTTA
AGGGTCTACCTGAGAGCTTTCAGATGTGGATGAGCCACGGCGACAAGCTG
CACTCTCTCCCGGAGGGCTTTGTCAACATCGGCACGACCAGTAACTCGGA
GCATGCGGCCATCGCCAACATTGAGAAAAAGCGCTTTGGACTTCAGTTCC
ACCCAGAGGTCACGCACTCCATCGGCGGCCTTCAAATCCTCCGTAATTTC
GTCGTGGGTGTCGTGGGTGCTCCCACCGACTGGAACATGGCAGATATTGC
CAAGGAATTCATCGAAGCGGTGCGGGTCAAAGTAGGGCCTACGGGGAAGG
TCATCGGCGCCGTCTCTGGAGGTGTAGACTCCTCTGTGGCGGCCGTGTTG
CTCAACAAAGCCATTGGTGATAGGTTTCACGCGGTGATGGTGGACTCGGG
CTGCCTCCGCCAGGATGAGGGGGCGCAGTGCGTGGAGCGGCTTCGGAACA
GGATGGGCATCAACCTGCACCTGGTGGACGCCCAAGACCTCTTCCTCGAC
AAACTCGCCGGGGTATCCGACCCGGAAACCAAGCGCAAGATCATCGGTAA
CACCTTCATTGAAGTCTTTGATCAAGAAGCACACCGCATCGGCGAGTGTG
ACTTCCTCCTCCAGGGAACATTATACCCGGATGTGATCGAGTCCATCTCC
TACAAGGGCCCCTCTGCCACCATCAAGTCTCACCACAACGTTGGTGGCCT
TCCCGACCGGATGAAGCTTCAGCTCATCGAGCCCCTCCGCGAACTCTTCA
AGGACGAGGTCCGCGCCCTCGGGATTGCTCTCGGCCTAGACGAGGAGAGT
GTGTGGCGTCACCCTTTCCCCGGCCCAGGGCTGGCCATCCGAATTATTGG
GGACGTCACCCGGGAAAAGCTGACCGTCCTGCGGCAGGCGGACGTGATCC
TTCTGGACGAATTGCACAAGAACGGCATCTACCGTGAAATCGCTCAGGCC
TTCTGTGTCCTCACCAACTGCAAGTCGGTTGGGGTTATGGGCGACGGACG
CACGTACGATTACCTGTGTGGCATCCGCCTCGTCTCCTCCACTGACTACA
TGACTGCCGATTGGTACCGCATCGACTGGGACATCCTGGCCAAGATCTCC
ACCCGCATTATCAATGAGGTCCAGGGCATCAACCGCTGTGCCTATGATTG
CTCTTCCAAGCCCCCTGCCACCATTGAATGGGAGTAA

Synonyms

Publications