NO27G00320.1, NO27G00320.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G00320.1
Unique Name	NO27G00320.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2706
Alignment location	chr27:113323..118361 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:113323..118361 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G00320.1 vs.
Match: EWM22966.1 (fad linked oxidase domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 607.8 bits (1566), Expect = 3.800e-170
Identity = 287/548 (52.37%), Postives = 388/548 (70.80%), Query Frame = 0

Query:   91 LSEQDPAILGGDPNSHFMINFGHNAMANGVRKHHPKTYDEVASLVRSVKAAGGRLRPMGALHSWSNILPEDDTDVLFLDQFKGLSQDPEDYARVTIQAGVLQSELADWADSKERGYGRFSYLSQATVVTGVTFVGACQTASHGSGFVGESTPDSIIEVTLVDHEGNIKHYSEGDPRIKVLAACLGMCGIILEVTARFNPSTDAVQVTRGRRPLHDLLPPRSVVINESFNPLKDFIEGEGYHGGALSYAPYNSAPEVGIKLEASKIDEYQSRDRIWSNSVQKLPPGTAPRPHRDGI-LFGTQTEPYYDKDAFYPLDYAAFVIGSRVPHLVVGEDRFH-KSQHFNPYLANYLSASVNYLGNPTGIYSGFRHFNTSRAHSQHLVKYLANVAPESDFEFAFRIEDDYANVYEAQRVLIEENDWMFRNRGCLPLSMFSGLRWTEASSCPLSHVYGKPGEKFALMECIATQGTDGWDEYVQRVFARWSQMRSKKDGSLPKPHWAKWDSRWVPGLLDYIKKVYADQIDMIRPVVLENDPNGLFRNSFLSDMFRLP 637
            L +    + G +P+   + N+  N    G+RKHHPKTYDEVA+LVR  +A G +LR MG  HSWSN+LP+D+TDV+FLD FK ++Q P DY+ VT+QAGVLQSELADWADS  RGYGRFSYL Q T+V  +TFVGACQTASHGSGFV   TPD II +T+++  G IK Y    P ++V+AACLGMCGI+L+VT RFNP T A  VT+ +   +DL PPR V IN+S+NPLK FI  E + GGA++Y+PYNSA     KL+ + I+EY   D +W+++V  L PGT   P RDG+ ++GTQ EP+YDKD F P D+   + GSR+    +G+ R + K  +++P++   ++  V ++  P+  Y     +NTS A S H ++Y+  +    DFEFAF+++DD+ N+YEA RV+IEE++ M+R +  +PL++F+ +RW  AS CPLSH +GKPGE+FA++E  ++ GT GW+EY++RV ARW+Q+RS KDGSLPKPHWAKW   W P ++ YIK+VYA QI  IRPVVL  DP G+FR S L D+F LP
Sbjct:   75 LVDDSDLVFGDNPDVDTLTNWAQNQKVTGLRKHHPKTYDEVAALVRQKRAEGAKLRVMGVAHSWSNVLPDDNTDVVFLDNFKLITQSPNDYSIVTVQAGVLQSELADWADSPARGYGRFSYLYQNTLVQPITFVGACQTASHGSGFV-PPTPDYIIAMTIINANGEIKFYDSSHPDLRVMAACLGMCGIVLDVTVRFNPDTSATMVTQTKMQYYDLFPPRGVPINDSYNPLKHFI--ESHAGGAINYSPYNSALLRSAKLDVNMIEEYHQSDGVWAHAVDNL-PGTPVCPSRDGLPIWGTQHEPFYDKDLFVPEDWLMNIPGSRIHRSFMGDWRLNSKWANYSPFMGQVVNNQVLFMNPPSFSYRTSVTYNTSNAGSTHFLRYIDGITSGLDFEFAFKVDDDFGNIYEAWRVMIEESENMWREKDMIPLNIFAAIRWVGASECPLSHAFGKPGERFAMLEPTSSHGTTGWEEYLKRVMARWTQIRS-KDGSLPKPHWAKWYKDWTPEVIPYIKQVYAAQIQRIRPVVLRQDPEGIFRTSTLCDIFDLP 617

The following BLAST results are available for this feature:

BLAST of NO27G00320.1 vs.

BLAST of NO27G00320.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22966.1	3.800e-170	52.37	fad linked oxidase domain-containing protein [Nann...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G00320	NO27G00320	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00320.1	NO27G00320.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00320.1.cds1	NO27G00320.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds2	NO27G00320.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds3	NO27G00320.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds4	NO27G00320.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds5	NO27G00320.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds6	NO27G00320.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds7	NO27G00320.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds8	NO27G00320.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds9	NO27G00320.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds10	NO27G00320.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds11	NO27G00320.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds12	NO27G00320.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds13	NO27G00320.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00320.1.cds14	NO27G00320.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:113323..118361+
coding sequence from alignment at chr27:113323..118361+

mRNA sequence

>NO27G00320.1 ID=NO27G00320.1|Name=NO27G00320.1|organism=Nannochloropsis oceanica|type=mRNA|length=2706bp
TCTATTTAGTATGCTATCGCACTTTTGGGGGTTTGCTTGCGGAGGAGACT
AGGCATTAAGTGCCAGGCGCGTATGAAAAAAGGGAGGCTGCTTGCGAGCG
GCTTGCCTTCACGGACCGTTGGATTAAGAAAATGGTGCAACCCCGGCAAT
GAGGGGTCCAATCCCGCAAGGCAAGAAACACGTCCTCCCTTTCAAATACC
ACAAAACACATCAGCATATTCATTTCATCGACAGACATACACATACTCGC
CTTAAGTGCCATCGGCATAGCTATTTTCAATACAAGAAGCATGTGTAAAC
ACCCCCGTTCCAAACGTCTCGAGCTACTACTACTACTTCTACTACACGTC
ATTCTCATATCCCCTCCCTTTATCACAACCACAGCGACGCCATGCGATAC
CTTCCCTGGACAATAAGACCGAACTTGGCCGTAATCCTCCTTCTACTTTC
CTTTTCGACCGCGCACGGGCAAACAGGCCTCCGGAAGGCCCCAAAGCAAA
GTCAGACTGGACGGCCCATCGAGGAGGCTACTCCTGCCTCTGCCGTCGTC
GATGTCTCCTCCTCTTCCTCCTCCGCCACAGCAGCAGCAGAAAGCCCCCA
CATAGCAGAAATACAAGCGACAGATGAAGCGGACAAGTTTGCCTTACCGG
GGACTCAGTCCTTGTCTGAGCAGGACCCAGCTATTCTGGGAGGGGACCCG
AACAGTCATTTTATGATTAATTTCGGACATAACGCCATGGCAAACGGGGT
GCGGAAGCACCATCCGAAGACGTATGATGAGGTGGCCAGCTTGGTCCGGT
CCGTCAAGGCCGCAGGCGGGCGACTCCGTCCTATGGGGGCTCTGCATTCA
TGGAGCAACATTCTTCCTGAGGACGACACTGACGTGCTCTTCCTCGATCA
GTTTAAAGGCCTCTCTCAGGATCCGGAAGACTATGCACGGGTCACTATCC
AAGCAGGTGTGCTGCAAAGTGAGCTAGCAGACTGGGCGGACAGCAAGGAA
AGAGGTTATGGTCGGTTCTCGTACTTGAGCCAAGCGACGGTTGTGACGGG
TGTAACGTTTGTAGGAGCGTGCCAGACGGCTTCACATGGAAGTGGGTTCG
TCGGCGAAAGCACCCCGGACTCTATCATCGAAGTCACTCTGGTCGACCAC
GAGGGAAACATCAAGCACTACTCCGAAGGCGATCCACGCATTAAGGTCCT
CGCGGCGTGTCTAGGCATGTGCGGTATCATTCTGGAGGTGACAGCGCGCT
TTAACCCTTCGACTGATGCCGTCCAGGTTACGCGTGGTCGTCGTCCGCTT
CATGATCTGCTTCCTCCTCGGTCGGTCGTCATCAACGAGTCCTTTAACCC
GCTCAAGGACTTTATCGAGGGAGAGGGTTATCATGGCGGGGCGCTCTCGT
ACGCTCCCTATAACAGCGCGCCAGAAGTGGGAATCAAGCTGGAAGCTAGC
AAGATAGATGAGTATCAATCTAGGGATCGGATCTGGAGCAATTCTGTACA
AAAGCTGCCACCGGGAACGGCCCCCCGACCTCATCGCGATGGAATCCTTT
TCGGCACCCAAACGGAGCCCTACTACGACAAAGATGCTTTCTACCCTCTT
GACTATGCCGCTTTCGTCATAGGCAGCCGGGTACCTCACTTGGTCGTGGG
CGAGGACAGGTTTCACAAGAGCCAACACTTCAATCCTTATTTGGCGAATT
ACCTCTCAGCGAGTGTCAACTACCTAGGCAATCCTACAGGGATCTATTCA
GGATTCAGGCATTTTAATACGTCCCGCGCCCATTCGCAACACCTGGTCAA
GTATCTAGCCAATGTGGCGCCTGAATCTGACTTTGAGTTCGCCTTTAGGA
TTGAGGATGACTATGCAAATGTCTATGAGGCCCAACGGGTGTTGATTGAG
GAGAATGACTGGATGTTCCGCAACCGAGGCTGCTTACCTCTGAGCATGTT
TTCAGGTCTACGGTGGACTGAAGCCTCTTCGTGTCCTCTTTCTCACGTCT
ATGGGAAGCCAGGAGAAAAATTCGCATTGATGGAGTGCATTGCCACGCAA
GGCACTGATGGATGGGACGAGTACGTTCAGCGAGTGTTTGCACGCTGGAG
TCAAATGCGTAGCAAGAAGGACGGGTCCCTTCCGAAGCCCCATTGGGCGA
AATGGGATAGTCGCTGGGTGCCCGGTCTATTAGATTATATCAAAAAGGTC
TACGCTGACCAGATCGATATGATTCGGCCGGTGGTGCTCGAGAACGATCC
AAACGGTTTGTTCCGTAACTCATTCTTGAGCGACATGTTTAGACTGCCCG
ATGGACATTGATATAATAAGGAGGGAGAGAGGGAGGGACGGGGAGGAAGG
GAGGGAGGGTAAGGACTGTGTTTGGAGAGAATGTACCTATGATGACGTCC
GTAACGAAAACGAAAGAGAGAACAAGAGAGAGACAAGGTGAAAGGTGAGA
AATGTAGGTGGGCCTAAGAAGAGAAAGGGCCCCAAGGTGATATGAGAGGT
AGGAGGGAGCGGGAACACTTGCGGGCTAAGAGGGAGGGGACGGAGGAGAT
GATTCTCAGCATAATCTCAGTTTGCATGAGAAACAGACAAGAGACAAGAG
GGAAAATGGTGGGTGGGTTTGTACAAACATAATAAGGATGTGCCCTGTCA
TTCATCCCCTGACGAGAACAAAATACCACGGAAGAGGAAGACACCGAATA
CTTGCG

protein sequence of NO27G00320.1

>NO27G00320.1-protein ID=NO27G00320.1-protein|Name=NO27G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=640bp
MRYLPWTIRPNLAVILLLLSFSTAHGQTGLRKAPKQSQTGRPIEEATPAS
AVVDVSSSSSSATAAAESPHIAEIQATDEADKFALPGTQSLSEQDPAILG
GDPNSHFMINFGHNAMANGVRKHHPKTYDEVASLVRSVKAAGGRLRPMGA
LHSWSNILPEDDTDVLFLDQFKGLSQDPEDYARVTIQAGVLQSELADWAD
SKERGYGRFSYLSQATVVTGVTFVGACQTASHGSGFVGESTPDSIIEVTL
VDHEGNIKHYSEGDPRIKVLAACLGMCGIILEVTARFNPSTDAVQVTRGR
RPLHDLLPPRSVVINESFNPLKDFIEGEGYHGGALSYAPYNSAPEVGIKL
EASKIDEYQSRDRIWSNSVQKLPPGTAPRPHRDGILFGTQTEPYYDKDAF
YPLDYAAFVIGSRVPHLVVGEDRFHKSQHFNPYLANYLSASVNYLGNPTG
IYSGFRHFNTSRAHSQHLVKYLANVAPESDFEFAFRIEDDYANVYEAQRV
LIEENDWMFRNRGCLPLSMFSGLRWTEASSCPLSHVYGKPGEKFALMECI
ATQGTDGWDEYVQRVFARWSQMRSKKDGSLPKPHWAKWDSRWVPGLLDYI
KKVYADQIDMIRPVVLENDPNGLFRNSFLSDMFRLPDGH*

mRNA from alignment at chr27:113323..118361+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G00320.1 ID=NO27G00320.1|Name=NO27G00320.1|organism=Nannochloropsis oceanica|type=mRNA|length=5039bp|location=Sequence derived from alignment at chr27:113323..118361+ (Nannochloropsis oceanica)
TCTATTTAGTATGCTATCGCACTTTTGGGGGTTTGCTTGCGGAGGAGACT
AGGCATTAAGTGCCAGGCGCGTATGAAAAAAGGGAGGCTGCTTGCGAGCG
GCTTGCCTTCACGGACCGTTGGATTAAGAAAATGGTGCAACCCCGGCAAT
GAGGGGTCCAATCCCGCAAGGCAAGAAACACGTCCTCCCTTTCAAATACC
ACAAAACACATCAGCATATTCATTTCATCGACAGACATACACATACTCGC
CTTAAGTGCCATCGGCATAGCTATTTTCAATACAAGAAGCATGTGTAAAC
ACCCCCGTTCCAAACGTCTCGAGCTACTACTACTACTTCTACTACACGTC
ATTCTCATATCCCCTCCCTTTATCACAACCACAGCGACGCCATGCGATAC
CTTCCCTGGACAATAAGACCGAACTTGGCCGTAATCCTCCTTCTACTTTC
CTTTTCGACCGCGCACGGGCAAACAGGCCTCCGGAAGGCCCCAAAGCAAA
GTCAGACTGGACGGCCCATCGAGGAGGCTACTCCTGCCTCTGCCGTCGTC
GATGTCTCCTCCTCTTCCTCCTCCGCCACAGCAGCAGCAGAAAGCCCCCA
CATAGCAGAAATACAAGCGACAGATGAAGCGGACAAGTTTGCCTTACCGG
GGACTCAGTCCTTGTCTGAGCAGGACCCAGCTATTCTGGGAGGGGACCCG
AACAGTCATTTTATGATTAATTTCGGACATAACGCCATGGCAAACGGGGT
GCGGAAGCACCATCCGAAGACGTATGATGAGGTGGCCAGGTAAAACAATT
AAAAAACACGGGAGAGGAAAGAAGGGAAGCAGGGAAGCAGAAAGACAGAG
GACACAGGGGAGAAGATCGCGAGACACACAGAGAGGGAGAGAGCGCAGGA
GAGTGTTGCAGAAAGTGCACGAGTACTCCTTACGCTAATTCCCCTCTTAC
TTACCTACATCTTTTCGAATATCTACACGTCAACCCAAGCTTGGTCCGGT
CCGTCAAGGCCGCAGGCGGGCGACTCCGTCCTATGGGGGCTCTGCATTCA
TGGAGCAACATTCTTCCTGAGGACGACACTGACGTGCTCTTCCTCGATCA
GTTTAAAGGTAGGCGTAGCGCACTCTTTCTCCGTGTATCTGTCCCTCGTT
CCCTTGCTACGTTGCTTGGTTCCATGAGAGGCTGGCGTTCCCGGAGCAAT
ATCCTGTCGGAATACAACACTGACATCTTTTTCCTTGGTCTAAAGCAACG
ATCCATCCTCTCTCCCTCCCTCGCTCACTCCCTCCTATTTTCCTTTCCTC
CCTGCTTATCTTCATTGCGTGGTTTTTCCTGCTTCATCCTGTGATGGTGT
GATAATCATCCCCACCTGACCCACATTTGTCTCTTATCTTTTGCTCCCTC
CTCTTCTTCTTCTCCTCCTGCCCTCTTTCCCTCTCTTCCTCCCAGGCCTC
TCTCAGGATCCGGAAGACTATGCACGGGTCACTATCCAAGCAGGTGTGCT
GCAAAGTGAGCTAGCAGACTGGGCGGACAGCAAGGAAAGAGGTATGTCTC
CGCCCTCCTTCCCTCCCTCCCTCGCCCCTTATGCCTCTACACGCCTTCCC
TTCATTCCTCCCTCCCTCCCTCCCTCCTGCTTTGCCTCTCTTCCGTCTTC
CTTTCTTCTTTCCAGGTTATGGTCGGTTCTCGTACTTGAGCCAAGCGACG
GTTGTGACGGGTGTAACGTTTGTAGGAGCGTGCCAGACGGCTTCACATGG
AAGGTAACGAGAAATGAGAGGAGAGGGGGGCAGGGACGCATTTCCTCCAC
CCTGGTCCGTTCCCTACTTTCCGCTCCCCTCGGCCTTTTTATTTTGATCC
TTTTCTATGGACATGAGTACTGTGACTTTGCGTATGATTCTCTGCCATTG
GTCCCTCGAGCAGATGGAACAGGGGCCGAAGGAGATATAAGGGATACGGC
ATGCTTTACCCGCCATTTCTTTACTGCAACAATCATCCATCTCTCTCCAT
AAACTCTAAACTCCGTTATGGATACAACTACAAATACAGTGGGTTCGTCG
GCGAAAGCACCCCGGACTCTATCATCGAAGTCACTCTGGTCGACCACGAG
GGAAACATCAAGCACTACTCCGAAGGCGATCCACGCATTAAGGTAGATCA
AGAGGAAGAGAGAGGACCCAGAGCATTATTTGGAGTGTTCAAGCTGAGCA
TCCCTCCTTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCGTCCTCTTTTCC
TTCTTTTTCTCGTCCTAGGTCCTCGCGGCGTGTCTAGGCATGTGCGGTAT
CATTCTGGAGGTGACAGCGCGCTTTAACCCTTCGACTGATGCCGTCCAGG
TTACGCGTGGTCGTCGTCCGCTTCATGATCTGCTTCCTCCTCGGTCGGTC
GTCATCAACGAGTCCTTTAACCCGCTCAAGGACTTTATCGAGGGAGAGGG
TTATCATGGCGGGGCGCTCTCGTACGCTCCCTATAACAGCGCGCCAGAAG
TGGGAATCAAGCTGGAAGCTAGCAAGATAGATGAGTATCAATCTAGGGTG
CGTCCTTGGATGTTTTCTTTCCCCTGTTCTTTCCCTAAGTCAATATCTCC
CTCCCTCGTTTTCTCCCCCTCTACCATACTCTTCAACCTGTCTGCCAACC
GACATTACATTTGCACGCTCGGTTCTTTTTGCTTTTGCTTTCGGCAATCT
TACATTGACTGTTCGGCATATACTTAATTACCACTCGTTTCCGCCCACCA
TCTCTGTTCTCCTCCCTTTTGTCCCTCAAGGATCGGATCTGGAGCAATTC
TGTACAAAAGCTGCCACCGGTAAGTAGGGAAACGAAAGAAGATGGGAATG
TATGGGTACACCTGAGAGACAATGGCGAGCAAACAGTGGCAGGTGCTTTG
GTGGACGGTAGGCATCTCAGAAAGAACGAAATAGGGAGAAATAAGATGTC
TCACCTAAAAATTTTACGTTTTTATCCCCTGAATCACACCATGGCAAAAT
AAGGGAACGGCCCCCCGACCTCATCGCGATGGAATCCTTTTCGGCACCCA
AACGGAGCCCTACTACGACAAAGGTAGATAGCTCTTCTTCAAGTCTACTC
TCGCTAGATCTTACCGCTTTCTCTGATCTATTTTCCCTGTCTGTAGATGC
TTTCTACCCTCTTGACTATGCCGCTTTCGTCATAGGCAGCCGGGTACCTC
ACTTGGTCGTGGGCGAGGACAGGTTGGTGGACCGTTTTTCCCCCCTTGTC
TCCCCACCTCCCGTATTTTACTCAATCTCCCTCCCACCCTTCTTTAGGTT
TCACAAGAGCCAACACTTCAATCCTTATTTGGCGAATTACCTCTCAGCGA
GTGTCAACTACCTAGGCAATCCTACAGGGATCTATTCAGGATTCAGGTAA
GAAGGGATGGGGGGAAGGAGAAAGAGATGGGGAAGGTGAGAAAGAAAACG
TGTGAAAGAGAGAAAGAAAGAACTTTATACCTGTTACTTCTTAATCAACA
TTTCTTAGCTTGATTTTTTAAATTTTCCTATTTTCCCGATTAACAGGCAT
TTTAATACGTCCCGCGCCCATTCGCAACACCTGGTCAAGTATCTAGCCAA
TGTGGCGCCTGAATCTGACTTTGAGTTCGCCTTTAGGATTGAGGATGACT
ATGCAAATGTCTATGAGGTGGGAGAGTAGGGAGAGGGACAGTACGGTCAC
ACTCGGCAGTTGCAGTGCGAGCGTTGTTCTAGTGGTCTATTGAGTGCCGG
TGGTTTGATGCTCACGACCATGACGTCCCATTTTCTTTCGCCCTTCGCCT
TGTCATTCCATCCTACAGGCCCAACGGGTGTTGATTGAGGAGAATGACTG
GATGTTCCGCAACCGAGGCTGCTTACCTCTGAGCATGTTTTCAGGTCTAC
GGTGGACTGAAGCCTCTTCGTGTCCTCTTTCTCACGTCTATGGGAAGCCA
GGAGAAAAATTCGCATTGATGGAGTGCATTGCCACGCAAGGCACTGATGG
TACGTGTAGCTCTTATTCAAGCTCACCATTTATATATGTGTCCAAATAAC
GTTATTCGTTAGCTTTCGCTCAGTCCGCAAATATGTTGTTATTGTATGAG
CCATGAGTGCGATGTATGGTGCCGCGTGTTTGCCTCACGCAGTACGTACG
CTTGTTCAGAGAAGGAATGTGTGTGTGTCATCTGGCTGTGCATCAAGGCG
ATTGTCAATGCCTTATATTTTTTTGTCCGCATATCTGCTGTCTTCCTTCA
TTGTTTTTTAAAAACAGGATGGGACGAGTACGTTCAGCGAGTGTTTGCAC
GCTGGAGTCAAATGCGTAGCAAGAAGGACGGGTCCCTTCCGAAGCCCCAT
TGGGCGAAATGGGATAGTCGCTGGGTGCCCGGTCTATTAGATTATATCAA
AAAGGTGAATATAAATGCAGGAAAAGGAGGCGTAGATGAAAGAGTTGAAA
TGAAGAGAGACGCAGTAATGATCTCACACACTCATCTTTCCTCCCTCCTT
GTTTCCGGTTCCCTTTTCATCCCTTCCCAGGTCTACGCTGACCAGATCGA
TATGATTCGGCCGGTGGTGCTCGAGAACGATCCAAACGGTTTGTTCCGTA
ACTCATTCTTGAGCGACATGTTTAGACTGCCCGATGGACATTGATATAAT
AAGGAGGGAGAGAGGGAGGGACGGGGAGGAAGGGAGGGAGGGTAAGGACT
GTGTTTGGAGAGAATGTACCTATGATGACGTCCGTAACGAAAACGAAAGA
GAGAACAAGAGAGAGACAAGGTGAAAGGTGAGAAATGTAGGTGGGCCTAA
GAAGAGAAAGGGCCCCAAGGTGATATGAGAGGTAGGAGGGAGCGGGAACA
CTTGCGGGCTAAGAGGGAGGGGACGGAGGAGATGATTCTCAGCATAATCT
CAGTTTGCATGAGAAACAGACAAGAGACAAGAGGGAAAATGGTGGGTGGG
TTTGTACAAACATAATAAGGATGTGCCCTGTCATTCATCCCCTGACGAGA
ACAAAATACCACGGAAGAGGAAGACACCGAATACTTGCG

Coding sequence (CDS) from alignment at chr27:113323..118361+

>NO27G00320.1 ID=NO27G00320.1|Name=NO27G00320.1|organism=Nannochloropsis oceanica|type=CDS|length=1920bp|location=Sequence derived from alignment at chr27:113323..118361+ (Nannochloropsis oceanica)
ATGCGATACCTTCCCTGGACAATAAGACCGAACTTGGCCGTAATCCTCCT
TCTACTTTCCTTTTCGACCGCGCACGGGCAAACAGGCCTCCGGAAGGCCC
CAAAGCAAAGTCAGACTGGACGGCCCATCGAGGAGGCTACTCCTGCCTCT
GCCGTCGTCGATGTCTCCTCCTCTTCCTCCTCCGCCACAGCAGCAGCAGA
AAGCCCCCACATAGCAGAAATACAAGCGACAGATGAAGCGGACAAGTTTG
CCTTACCGGGGACTCAGTCCTTGTCTGAGCAGGACCCAGCTATTCTGGGA
GGGGACCCGAACAGTCATTTTATGATTAATTTCGGACATAACGCCATGGC
AAACGGGGTGCGGAAGCACCATCCGAAGACGTATGATGAGGTGGCCAGCT
TGGTCCGGTCCGTCAAGGCCGCAGGCGGGCGACTCCGTCCTATGGGGGCT
CTGCATTCATGGAGCAACATTCTTCCTGAGGACGACACTGACGTGCTCTT
CCTCGATCAGTTTAAAGGCCTCTCTCAGGATCCGGAAGACTATGCACGGG
TCACTATCCAAGCAGGTGTGCTGCAAAGTGAGCTAGCAGACTGGGCGGAC
AGCAAGGAAAGAGGTTATGGTCGGTTCTCGTACTTGAGCCAAGCGACGGT
TGTGACGGGTGTAACGTTTGTAGGAGCGTGCCAGACGGCTTCACATGGAA
GTGGGTTCGTCGGCGAAAGCACCCCGGACTCTATCATCGAAGTCACTCTG
GTCGACCACGAGGGAAACATCAAGCACTACTCCGAAGGCGATCCACGCAT
TAAGGTCCTCGCGGCGTGTCTAGGCATGTGCGGTATCATTCTGGAGGTGA
CAGCGCGCTTTAACCCTTCGACTGATGCCGTCCAGGTTACGCGTGGTCGT
CGTCCGCTTCATGATCTGCTTCCTCCTCGGTCGGTCGTCATCAACGAGTC
CTTTAACCCGCTCAAGGACTTTATCGAGGGAGAGGGTTATCATGGCGGGG
CGCTCTCGTACGCTCCCTATAACAGCGCGCCAGAAGTGGGAATCAAGCTG
GAAGCTAGCAAGATAGATGAGTATCAATCTAGGGATCGGATCTGGAGCAA
TTCTGTACAAAAGCTGCCACCGGGAACGGCCCCCCGACCTCATCGCGATG
GAATCCTTTTCGGCACCCAAACGGAGCCCTACTACGACAAAGATGCTTTC
TACCCTCTTGACTATGCCGCTTTCGTCATAGGCAGCCGGGTACCTCACTT
GGTCGTGGGCGAGGACAGGTTTCACAAGAGCCAACACTTCAATCCTTATT
TGGCGAATTACCTCTCAGCGAGTGTCAACTACCTAGGCAATCCTACAGGG
ATCTATTCAGGATTCAGGCATTTTAATACGTCCCGCGCCCATTCGCAACA
CCTGGTCAAGTATCTAGCCAATGTGGCGCCTGAATCTGACTTTGAGTTCG
CCTTTAGGATTGAGGATGACTATGCAAATGTCTATGAGGCCCAACGGGTG
TTGATTGAGGAGAATGACTGGATGTTCCGCAACCGAGGCTGCTTACCTCT
GAGCATGTTTTCAGGTCTACGGTGGACTGAAGCCTCTTCGTGTCCTCTTT
CTCACGTCTATGGGAAGCCAGGAGAAAAATTCGCATTGATGGAGTGCATT
GCCACGCAAGGCACTGATGGATGGGACGAGTACGTTCAGCGAGTGTTTGC
ACGCTGGAGTCAAATGCGTAGCAAGAAGGACGGGTCCCTTCCGAAGCCCC
ATTGGGCGAAATGGGATAGTCGCTGGGTGCCCGGTCTATTAGATTATATC
AAAAAGGTCTACGCTGACCAGATCGATATGATTCGGCCGGTGGTGCTCGA
GAACGATCCAAACGGTTTGTTCCGTAACTCATTCTTGAGCGACATGTTTA
GACTGCCCGATGGACATTGA

Synonyms

Publications